Gilbert
FTDNA: N125396, FGC: NGXTXTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA N125396 | FGC NGXTX |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:9131518-A-G hg38:Y:9293909-A-G | FGC9656 YP4158 | Y | + | ** | ||||
| hg19:Y:5851688-A-G hg38:Y:5983647-A-G | FGC19757 | + | + | |||||
| hg19:Y:7268474-T-C hg38:Y:7400433-T-C | FGC19758 | Y | Y | + | + | |||
| hg19:Y:15782380-T-C hg38:Y:13670500-T-C | FGC19770 | Y | Y | + | + | |||
| hg19:Y:16852703-T-C hg38:Y:14740823-T-C | FGC19772 | Y | Y | + | + | |||
| hg19:Y:17141862-C-T hg38:Y:15029982-C-T | FGC19773 | Y | Y | + | + | |||
| hg19:Y:17275463-C-T hg38:Y:15163583-C-T | A1140 PR2371 | Y | Y | + | + | |||
| hg19:Y:21969835-C-A hg38:Y:19807949-C-A | FGC19778 | Y | Y | + | + | |||
| hg19:Y:22239358-G-T hg38:Y:20077472-G-T | BY42596 | FGC19779 | DYZ19 | + | ** | |||
| hg19:Y:28480011-G-C hg38:Y:26333864-G-C | FGC19781 | ** | + | |||||
| hg19:Y:5937074-A-G hg38:Y:6069033-A-G | FGC31499 | + | ||||||
| hg19:Y:6028966-C-T hg38:Y:6160925-C-T | YFS233465 FGC31502 | + | ||||||
| hg19:Y:6499535-C-A hg38:Y:6631494-C-A | FGC31503 | + | ||||||
| hg19:Y:7016501-A-G hg38:Y:7148460-A-G | FGC31505 | Y | + | |||||
| hg19:Y:16232248-T-C hg38:Y:14120368-T-C | FGC31510 | Y | Y | + | ||||
| hg19:Y:18968155-C-T hg38:Y:16856275-C-T | FGC31511 | Y | + | |||||
| hg19:Y:20839015-G-T hg38:Y:18677129-G-T | YFS233549 FGC31515 | P4_Gap | + | |||||
| hg19:Y:21885831-C-T hg38:Y:19723945-C-T | FGC19777 | Y | Y | + | ||||
| hg19:Y:17381651-C-T hg38:Y:15269771-C-T | FGC31492 | Y | * | |||||
| hg19:Y:9736500-T-C hg38:Y:9898891-T-C | FGC31506 YFS233488 | IR3_Prx | ** | * | ||||
| hg19:Y:3510250-A-G hg38:Y:3642209-A-G | FGC31497 | * | ||||||
| hg19:Y:4777787-T-A hg38:Y:4909746-T-A | FGC31498 | * | ||||||
| hg19:Y:14910979-G-T hg38:Y:12799046-G-T | FGC31509 | Y | Y | * | ||||
| hg19:Y:18990950-A-G hg38:Y:16879070-A-G | FGC31512 | Y | Y | * | ||||
| hg19:Y:9131450-G-A hg38:Y:9293841-G-A | Z8908 | ZS350 | ** | |||||
| hg19:Y:21337651-G-A hg38:Y:19175765-G-A | PF3560 | ** | ||||||
| hg19:Y:9131437-T-G hg38:Y:9293828-T-G | Z8908 | Z8908 Z4436 | ** | |||||
| hg19:Y:9131459-C-G hg38:Y:9293850-C-G | Z8908 | ZS351 YP5308 | ** | |||||
| hg19:Y:13319855-T-C hg38:Y:11164179-T-C | ** | |||||||
| hg19:Y:22236606-C-T hg38:Y:20074720-C-T | DYZ19 | ** | ||||||
| hg19:Y:9131474-A-C hg38:Y:9293865-A-C | ** | |||||||
| hg19:Y:9131475-T-C hg38:Y:9293866-T-C | ** | |||||||
| hg19:Y:14319551-ATG-A hg38:Y:12198845-ATG-A | ** | |||||||
| hg19:Y:18002074-A-G hg38:Y:15890194-A-G | FGC7494 | P7_Gap | ** | |||||
| hg19:Y:7723814-G-A hg38:Y:7855773-G-A | YFS233475 | ** | ** | |||||
| hg19:Y:15167971-C-A hg38:Y:13056057-C-A | PF7500 | ** | ||||||
| hg19:Y:13287250-G-A hg38:Y:11131574-G-A | ** | |||||||
| hg19:Y:15255769-GGTGTGTGTGTGTGT-G hg38:Y:13143855-GGTGTGTGTGTGT-G | 24×GT | ** | ||||||
| hg19:Y:20569614-C-CAAAAA hg38:Y:18407728-C-CAAAAA | P5_Dst | 33×A | ** | |||||
| hg19:Y:19965303-C-CT hg38:Y:17853423-C-CT | P5_Prx | 10×T | *** | |||||
| hg19:Y:25524693-C-CTTTT hg38:Y:23378546-C-CTTTT | P1_gr1 | 33×T | *** | |||||
| hg19:Y:58975202-A-T hg38:Y:56829055-A-T | *** | |||||||
| hg19:Y:22361657-C-T hg38:Y:20199771-C-T | DYZ19 | *** | ||||||
| hg19:Y:9198340-C-A hg38:Y:9360731-C-A | *** | |||||||
| hg19:Y:13256791-A-C hg38:Y:11101115-A-C | *** | |||||||
| hg19:Y:13256773-T-C hg38:Y:11101097-T-C | *** | |||||||
| hg19:Y:27432937-C-A hg38:Y:25286790-C-A | P1_g3 | *** | ||||||
| hg19:Y:58843537-T-G hg38:Y:56747334-A-C | *** | |||||||
| hg19:Y:58898602-T-G hg38:Y:56692269-A-C | *** | |||||||
| hg19:Y:20332111-C-CAAAAAAAAAAAAAAAAA hg38:Y:18170225-C-CAAAAAAAAAAAAAAAAA | P5_Dst | 30×A | *** | |||||
| hg19:Y:58987211-ATCAC-TTCAT hg38:Y:56841064-ATCAC-TTCAT | *** | |||||||
| hg19:Y:13319782-A-T hg38:Y:11164106-A-T | *** | |||||||
| hg19:Y:22257118-C-G hg38:Y:20095232-C-G | DYZ19 | *** | ||||||
| hg19:Y:27151331-A-T hg38:Y:25005184-A-T | P1_g3 | *** | ||||||
| hg19:Y:58893231-G-C hg38:Y:56697640-C-G | *** | |||||||
| hg19:Y:22341971-AGA-TGG hg38:Y:20180085-AGA-TGG | DYZ19 | *** | ||||||
| hg19:Y:22235093-G-T hg38:Y:20073207-G-T | DYZ19 | *** | ||||||
| hg19:Y:22252915-T-A hg38:Y:20091029-T-A | DYZ19 | *** | ||||||
| hg19:Y:22353019-GT-TC hg38:Y:20191133-GT-TC | DYZ19 | *** | ||||||
| hg19:Y:9429667-C-CAAAA hg38:Y:9592058-C-CAAAA | 25×A | *** | ||||||
| hg19:Y:25472022-TCTTC-T hg38:Y:23325875-TCTTC-T | P2_r2 | *** | ||||||
| hg19:Y:22232040-C-A hg38:Y:20070154-C-A | BY10784 | DYZ19 | *** | |||||
| hg19:Y:58909150-G-C hg38:Y:56681721-C-G | *** | |||||||
| hg19:Y:58870586-TAATTCGAGCCAC-T hg38:Y:56720272-GGTGGCTCGAATT-G | *** | |||||||
| hg19:Y:22226503-G-T hg38:Y:20064617-G-T | DYZ19 | *** | ||||||
| hg19:Y:22496111-T-G hg38:Y:20334225-T-G | DYZ19 | *** | ||||||
| hg19:Y:27151329-G-T hg38:Y:25005182-G-T | P1_g3 | *** | ||||||
| hg19:Y:22496118-TC-GT hg38:Y:20334232-TC-GT | DYZ19 | *** | ||||||
| hg19:Y:58907314-CTATTCCATT-C hg38:Y:56683547-GAATGGAATA-G | *** | |||||||
| hg19:Y:13485089-A-C hg38:Y:11329413-A-C | *** | |||||||
| hg19:Y:22292695-G-T hg38:Y:20130809-G-T | DYZ19 | *** | ||||||
| hg19:Y:58829070-C-A hg38:Y:56761801-G-T | *** | |||||||
| hg19:Y:58872240-C-T hg38:Y:56718631-G-A | *** | |||||||
| hg19:Y:13482969-TA-CC hg38:Y:11327293-TA-CC | *** | |||||||
| hg19:Y:13256068-G-T hg38:Y:11100392-G-T | *** | |||||||
| hg19:Y:13460188-C-G hg38:Y:11304512-C-G | *** | |||||||
| hg19:Y:13474828-A-G hg38:Y:11319152-A-G | *** | |||||||
| hg19:Y:13716396-T-A hg38:Y:11560720-T-A | DYZ17 | *** | ||||||
| hg19:Y:58876306-A-T hg38:Y:56714565-T-A | *** | |||||||
| hg19:Y:22263779-G-A hg38:Y:20101893-G-A | DYZ19 | *** | ||||||
| hg19:Y:10090635-G-C hg38:Y:10253026-G-C | *** | |||||||
| hg19:Y:23801733-C-CAAAA hg38:Y:21639847-C-CAAAA | 31×A | *** | ||||||
| hg19:Y:13256715-G-A hg38:Y:11101039-G-A | *** | |||||||
| hg19:Y:58831498-GTTC-ATTT hg38:Y:56759370-GAAC-AAAT | *** | |||||||
| hg19:Y:20537954-G-C hg38:Y:18376068-G-C | P5_Dst | *** | ||||||
| hg19:Y:20537986-C-A hg38:Y:18376100-C-A | P5_Dst | *** | ||||||
| hg19:Y:22226524-TG-AC hg38:Y:20064638-TG-AC | DYZ19 | *** | ||||||
| hg19:Y:22491021-C-G hg38:Y:20329135-C-G | DYZ19 | *** | ||||||
| hg19:Y:13253705-TTCA-CTCT hg38:Y:11098029-TTCA-CTCT | *** | |||||||
| hg19:Y:19937284-G-GCCCCCC hg38:Y:17825404-G-GCCCCCC | P5_Prx | 13×C | *** | |||||
| hg19:Y:58823275-CCCATTCCATCTCATTCCATTCCATT-C hg38:Y:56767561-AATGGAATGGAATGGAATGGAATGAG-A | *** | |||||||
| hg19:Y:59004624-GAAAGAAAG-G,GAAAGAAAC hg38:Y:56858477-GAAAGAAAG-G,GAAAGAAAC | *** | |||||||
| hg19:Y:20127904-T-C hg38:Y:18016024-T-C | P5_Dst | *** | ||||||
| hg19:Y:58840403-A-T hg38:Y:56750468-T-A | *** | |||||||
| hg19:Y:13461950-TGGT-AGGC hg38:Y:11306274-TGGT-AGGC | *** | |||||||
| hg19:Y:13483214-GATACT-AATATG hg38:Y:11327538-GATACT-AATATG | *** | |||||||
| hg19:Y:13492973-TCCTG-CCTTA hg38:Y:11337297-TCCTG-CCTTA | *** | |||||||
| hg19:Y:22366009-GTTG-TTTT hg38:Y:20204123-GTTG-TTTT | DYZ19 | *** | ||||||
| hg19:Y:22495815-A-C hg38:Y:20333929-A-C | DYZ19 | *** | ||||||
| hg19:Y:59030791-G-GAA hg38:Y:56884644-G-GAA | 10×A | *** | ||||||
| hg19:Y:59013640-TTTTTT-ATATATA hg38:Y:56867493-TTTTTT-ATATATA | *** | |||||||
| hg19:Y:58872331-A-C hg38:Y:56718540-T-G | *** | |||||||
| hg19:Y:13480008-CA-TG hg38:Y:11324332-CA-TG | *** | |||||||
| hg19:Y:58838389-A-C hg38:Y:56752482-T-G | *** | |||||||
| hg19:Y:58877129-T-C hg38:Y:56713742-A-G | *** | |||||||
| hg19:Y:22359920-C-A hg38:Y:20198034-C-A | DYZ19 | *** | ||||||
| hg19:Y:13734082-T-G hg38:Y:11578406-T-G | DYZ17 | *** | ||||||
| hg19:Y:58872258-G-T hg38:Y:56718613-C-A | *** | |||||||
| hg19:Y:58882818-A-C hg38:Y:56708053-T-G | *** | |||||||
| hg19:Y:10066965-CCAAC-TCAAT hg38:Y:10229356-CCAAC-TCAAT | *** | |||||||
| hg19:Y:58830741-ATG-TTC hg38:Y:56760128-CAT-GAA | *** | |||||||
| hg19:Y:13483807-C-T hg38:Y:11328131-C-T | *** | |||||||
| hg19:Y:10084308-TA-T hg38:Y:10246699-TA-T | *** | |||||||
| hg19:Y:28491339-A-ACACCCCCAT hg38:Y:26345192-A-ACACCCCCAT | *** | |||||||
| hg19:Y:10090758-G-T hg38:Y:10253149-G-T | *** | |||||||
| hg19:Y:22504362-G-T hg38:Y:20342476-G-T | DYZ19 | *** | ||||||
| hg19:Y:13503675-ATG-TTA hg38:Y:11347999-ATG-TTA | *** | |||||||
| hg19:Y:58829066-TTCCCTTCCG-ATCCCTTCCA hg38:Y:56761796-CGGAAGGGAA-TGGAAGGGAT | *** | |||||||
| hg19:Y:20541680-T-C hg38:Y:18379794-T-C | P5_Dst | *** | ||||||
| hg19:Y:13488843-TG-CC hg38:Y:11333167-TG-CC | *** | |||||||
| hg19:Y:19377435-GAAGG-AAAGA hg38:Y:17265555-GAAGG-AAAGA | *** | |||||||
| hg19:Y:13475480-C-G hg38:Y:11319804-C-G | *** | |||||||
| hg19:Y:6162272-T-G hg38:Y:6294231-T-G | IR3_Dst | *** | ||||||
| hg19:Y:6162229-A-T hg38:Y:6294188-A-T | IR3_Dst | *** | ||||||
| hg19:Y:58843581-A-C hg38:Y:56747290-T-G | *** | |||||||
| hg19:Y:22334409-A-C hg38:Y:20172523-A-C | DYZ19 | *** | ||||||
| hg19:Y:58844865-A-C hg38:Y:56746006-T-G | *** | |||||||
| hg19:Y:13535673-A-G hg38:Y:11379997-A-G | *** | |||||||
| hg19:Y:13140070-ACTCGAGTGCGTGTGATTC-A hg38:Y:10629556-ACTCGAGTGCGTGTGATTC-A | *** | |||||||
| hg19:Y:58891342-ATAGCATTCCATTG-A hg38:Y:56699515-GCAATGGAATGCTA-G | *** | |||||||
| hg19:Y:22291970-T-G hg38:Y:20130084-T-G | DYZ19 | *** | ||||||
| hg19:Y:58824858-G-T hg38:Y:56766013-C-A | *** | |||||||
| hg19:Y:58877130-G-C hg38:Y:56713741-C-G | *** | |||||||
| hg19:Y:22127975-C-CTTTTTTTT hg38:Y:19966089-C-CTTTTTTTT | 20×T | *** | ||||||
| hg19:Y:27432945-C-A hg38:Y:25286798-C-A | P1_g3 | *** | ||||||
| hg19:Y:13294189-T-C hg38:Y:11138513-T-C | *** | |||||||
| hg19:Y:3481514-C-A hg38:Y:3613473-C-A | 12×A | *** | ||||||
| hg19:Y:3663397-G-A hg38:Y:3795356-G-A | *** | |||||||
| hg19:Y:6684205-C-CAAAAAA hg38:Y:6816164-C-CAAAAAA | 31×A | *** | ||||||
| hg19:Y:13256963-A-C hg38:Y:11101287-A-C | *** | |||||||
| hg19:Y:13351208-T-A hg38:Y:11195532-T-A | *** | |||||||
| hg19:Y:22048695-A-AAAT hg38:Y:19886809-A-AAAT | 9×AAT | *** | ||||||
| hg19:Y:58843242-T-G hg38:Y:56747629-A-C | *** | |||||||
| hg19:Y:4090893-A-G hg38:Y:4222852-A-G | *** | |||||||
| hg19:Y:13463860-CACGCGGGA-GACGTGGGG hg38:Y:11308184-CACGCGGGA-GACGTGGGG | *** | |||||||
| hg19:Y:22495758-C-TG hg38:Y:20333872-C-TG | DYZ19 | *** | ||||||
| hg19:Y:59024004-AAAAAAAAAAAAAAAA-CAAAAAAAAAG hg38:Y:56877857-AAAAAAAAAAAAAAAA-CAAAAAAAAAG | *** | |||||||
| hg19:Y:22449750-A-C hg38:Y:20287864-A-C | DYZ19 | *** | ||||||
| hg19:Y:22449757-T-G hg38:Y:20287871-T-G | DYZ19 | *** | ||||||
| hg19:Y:58876391-C-A hg38:Y:56714480-G-T | *** | |||||||
| hg19:Y:58876402-A-T hg38:Y:56714469-T-A | *** | |||||||
| hg19:Y:13258855-T-C hg38:Y:11103179-T-C | *** | |||||||
| hg19:Y:22255114-G-A hg38:Y:20093228-G-A | DYZ19 | *** | ||||||
| hg19:Y:24658495-C-T hg38:Y:22512348-C-T | P3_b2 | *** | ||||||
| hg19:Y:10034792-T-C hg38:Y:10197183-T-C | *** | |||||||
| hg19:Y:6162207-C-G hg38:Y:6294166-C-G | IR3_Dst | *** | ||||||
| hg19:Y:22456686-A-G hg38:Y:20294800-A-G | DYZ19 | *** | ||||||
| hg19:Y:6162228-GA-AT hg38:Y:6294187-GA-AT | IR3_Dst | *** | ||||||
| hg19:Y:10023123-G-C hg38:Y:10185514-G-C | *** | |||||||
| hg19:Y:58843642-G-T hg38:Y:56747229-C-A | *** | |||||||
| hg19:Y:58862541-C-T hg38:Y:56728330-G-A | *** | |||||||
| hg19:Y:13287270-T-A hg38:Y:11131594-T-A | *** | |||||||
| hg19:Y:58843642-GC-TT hg38:Y:56747228-GC-AA | *** | |||||||
| hg19:Y:58828933-A-C hg38:Y:56761938-T-G | *** | |||||||
| hg19:Y:58874490-T-A hg38:Y:56716381-A-T | *** | |||||||
| hg19:Y:13140079-CGTGTGATTCCATTAAATCAGA-C hg38:Y:10629565-CGTGTGATTCCATTAAATCAGA-C | *** | |||||||
| hg19:Y:58843990-CATTCCATTCGATTTAGTTCGATTCTATTCACTTCCATTTCCATTCG-C hg38:Y:56746825-GGAATGGAATCGAATGGAAATGGAAGTGAATAGAATCGAACTAAATC-G | *** | |||||||
| hg19:Y:58861617-A-G hg38:Y:56729254-T-C | *** | |||||||
| hg19:Y:22256553-G-T hg38:Y:20094667-G-T | BY214425 | DYZ19 | *** | *** | ||||
| hg19:Y:22274427-G-C hg38:Y:20112541-G-C | DYZ19 | *** | ||||||
| hg19:Y:22284119-G-A hg38:Y:20122233-G-A | DYZ19 | *** | ||||||
| hg19:Y:22288803-A-T hg38:Y:20126917-A-T | DYZ19 | *** | ||||||
| hg19:Y:22291277-G-A hg38:Y:20129391-G-A | DYZ19 | *** | ||||||
| hg19:Y:22363438-G-A hg38:Y:20201552-G-A | DYZ19 | *** | ||||||
| hg19:Y:22467145-C-A hg38:Y:20305259-C-A | BY43937 | DYZ19 | *** | *** | ||||
| hg19:Y:25932916-C-T hg38:Y:23786769-C-T | P1_Y1 | *** | ||||||
| hg19:Y:13481879-A-G hg38:Y:11326203-A-G | *** | |||||||
| hg19:Y:22491722-T-C hg38:Y:20329836-T-C | DYZ19 | *** | ||||||
| hg19:Y:58870601-A-T hg38:Y:56720270-T-A | *** | |||||||
| hg19:Y:28206234-A-T hg38:Y:26060087-A-T | Z21561 | P1_b4 | *** | |||||
| hg19:Y:58869873-T-C hg38:Y:56720998-A-G | *** | |||||||
| hg19:Y:3006930-T-C hg38:Y:3138889-T-C | *** | |||||||
| hg19:Y:3548103-T-C hg38:Y:3680062-T-C | *** | |||||||
| hg19:Y:4712646-T-A hg38:Y:4844605-T-A | *** | |||||||
| hg19:Y:6162228-G-A hg38:Y:6294187-G-A | IR3_Dst | *** | ||||||
| hg19:Y:7026698-T-C hg38:Y:7158657-T-C | *** | |||||||
| hg19:Y:7120151-T-C hg38:Y:7252110-T-C | *** | |||||||
| hg19:Y:7536057-A-G hg38:Y:7668016-A-G | *** | |||||||
| hg19:Y:9562011-C-T hg38:Y:9724402-C-T | IR3_Prx | *** | ||||||
| hg19:Y:9589929-C-A hg38:Y:9752320-C-A | IR3_Prx | *** | ||||||
| hg19:Y:9589930-T-A hg38:Y:9752321-T-A | IR3_Prx | *** | ||||||
| hg19:Y:9589935-C-T hg38:Y:9752326-C-T | IR3_Prx | 9×T | *** | |||||
| hg19:Y:9611329-A-T hg38:Y:9773720-A-T | IR3_Prx | *** | ||||||
| hg19:Y:9986928-G-A hg38:Y:10149319-G-A | *** | |||||||
| hg19:Y:10034757-A-G hg38:Y:10197148-A-G | *** | |||||||
| hg19:Y:10034760-T-C hg38:Y:10197151-T-C | *** | |||||||
| hg19:Y:10034781-A-T hg38:Y:10197172-A-T | *** | |||||||
| hg19:Y:10034782-C-A hg38:Y:10197173-C-A | *** | |||||||
| hg19:Y:10034788-T-C hg38:Y:10197179-T-C | *** | |||||||
| hg19:Y:10090641-G-A hg38:Y:10253032-G-A | *** | |||||||
| hg19:Y:10090650-C-G hg38:Y:10253041-C-G | *** | |||||||
| hg19:Y:10090657-C-A hg38:Y:10253048-C-A | *** | |||||||
| hg19:Y:13105751-T-A hg38:Y:10595237-T-A | *** | |||||||
| hg19:Y:13245619-G-A hg38:Y:11089943-G-A | *** | |||||||
| hg19:Y:13310740-G-A hg38:Y:11155064-G-A | *** | |||||||
| hg19:Y:13319762-A-G hg38:Y:11164086-A-G | *** | |||||||
| hg19:Y:13328979-G-T hg38:Y:11173303-G-T | *** | |||||||
| hg19:Y:13373097-C-A hg38:Y:11217421-C-A | *** | |||||||
| hg19:Y:13390782-C-A hg38:Y:11235106-C-A | *** | |||||||
| hg19:Y:13390788-T-C hg38:Y:11235112-T-C | *** | |||||||
| hg19:Y:13392034-A-G hg38:Y:11236358-A-G | *** | |||||||
| hg19:Y:13481883-C-A hg38:Y:11326207-C-A | *** | |||||||
| hg19:Y:13483789-T-A hg38:Y:11328113-T-A | *** | |||||||
| hg19:Y:13535701-A-G hg38:Y:11380025-A-G | *** | |||||||
| hg19:Y:13696877-A-C hg38:Y:11541201-A-C | DYZ17 | *** | ||||||
| hg19:Y:13708410-T-G hg38:Y:11552734-T-G | DYZ17 | *** | ||||||
| hg19:Y:13734071-A-G hg38:Y:11578395-A-G | DYZ17 | *** | ||||||
| hg19:Y:13735770-G-T hg38:Y:11580094-G-T | DYZ17 | *** | ||||||
| hg19:Y:14985044-A-C hg38:Y:12873112-A-C | *** | |||||||
| hg19:Y:15294098-A-T hg38:Y:13182197-A-T | *** | |||||||
| hg19:Y:18274698-G-A hg38:Y:16162818-G-A | P6_Prx | *** | ||||||
| hg19:Y:18342931-A-T hg38:Y:16231051-A-T | P6_Prx | *** | ||||||
| hg19:Y:18454668-T-C hg38:Y:16342788-T-C | P6_Dst | *** | ||||||
| hg19:Y:18537223-T-G hg38:Y:16425343-T-G | P6_Dst | *** | ||||||
| hg19:Y:19740566-A-T hg38:Y:17628686-A-T | P5_Prx | *** | ||||||
| hg19:Y:19757139-A-T hg38:Y:17645259-A-T | P5_Prx | *** | ||||||
| hg19:Y:19759512-G-T hg38:Y:17647632-G-T | P5_Prx | *** | ||||||
| hg19:Y:19759520-T-G hg38:Y:17647640-T-G | P5_Prx | *** | ||||||
| hg19:Y:19759525-T-C hg38:Y:17647645-T-C | P5_Prx | *** | ||||||
| hg19:Y:19759530-G-C hg38:Y:17647650-G-C | P5_Prx | *** | ||||||
| hg19:Y:19762116-G-C hg38:Y:17650236-G-C | P5_Prx | *** | ||||||
| hg19:Y:19762117-A-T hg38:Y:17650237-A-T | P5_Prx | *** | ||||||
| hg19:Y:19762118-G-C hg38:Y:17650238-G-C | P5_Prx | *** | ||||||
| hg19:Y:20261655-A-T hg38:Y:18099769-A-T | P5_Dst | *** | ||||||
| hg19:Y:20333196-A-G hg38:Y:18171310-A-G | P5_Dst | *** | ||||||
| hg19:Y:20333200-A-G hg38:Y:18171314-A-G | P5_Dst | *** | ||||||
| hg19:Y:20333204-A-G hg38:Y:18171318-A-G | P5_Dst | *** | ||||||
| hg19:Y:20459067-C-A hg38:Y:18297181-C-A | P5_Dst | *** | ||||||
| hg19:Y:20461526-A-G hg38:Y:18299640-A-G | P5_Dst | *** | ||||||
| hg19:Y:20461530-A-G hg38:Y:18299644-A-G | P5_Dst | *** | ||||||
| hg19:Y:20461550-C-T hg38:Y:18299664-C-T | P5_Dst | *** | ||||||
| hg19:Y:20461561-T-G hg38:Y:18299675-T-G | P5_Dst | *** | ||||||
| hg19:Y:20461563-T-G hg38:Y:18299677-T-G | P5_Dst | *** | ||||||
| hg19:Y:20526465-A-T hg38:Y:18364579-A-T | P5_Dst | *** | ||||||
| hg19:Y:20526670-C-T hg38:Y:18364784-C-T | P5_Dst | *** | ||||||
| hg19:Y:20541627-T-G hg38:Y:18379741-T-G | P5_Dst | *** | ||||||
| hg19:Y:22245029-T-C hg38:Y:20083143-T-C | DYZ19 | *** | ||||||
| hg19:Y:22273636-C-T hg38:Y:20111750-C-T | DYZ19 | *** | ||||||
| hg19:Y:22354389-A-T hg38:Y:20192503-A-T | DYZ19 | *** | ||||||
| hg19:Y:22361651-G-T hg38:Y:20199765-G-T | DYZ19 | *** | ||||||
| hg19:Y:22420940-T-A hg38:Y:20259054-T-A | DYZ19 | *** | ||||||
| hg19:Y:22431789-A-G hg38:Y:20269903-A-G | DYZ19 | *** | ||||||
| hg19:Y:22431824-T-A hg38:Y:20269938-T-A | DYZ19 | *** | ||||||
| hg19:Y:22449732-C-G hg38:Y:20287846-C-G | DYZ19 | *** | ||||||
| hg19:Y:22491364-G-T hg38:Y:20329478-G-T | DYZ19 | *** | ||||||
| hg19:Y:25207942-G-T hg38:Y:23061795-G-T | P2_r1 | *** | ||||||
| hg19:Y:25207949-C-A hg38:Y:23061802-C-A | P2_r1 | *** | ||||||
| hg19:Y:25526589-C-T hg38:Y:23380442-C-T | P1_gr1 | *** | ||||||
| hg19:Y:25526592-C-T hg38:Y:23380445-C-T | P1_gr1 | *** | ||||||
| hg19:Y:25536772-A-T hg38:Y:23390625-A-T | P1_gr1 | *** | ||||||
| hg19:Y:25715045-G-A hg38:Y:23568898-G-A | P1_b3 | *** | ||||||
| hg19:Y:25854911-A-G hg38:Y:23708764-A-G | P1_Y1 | *** | ||||||
| hg19:Y:27395198-G-T hg38:Y:25249051-G-T | P1_g3 | *** | ||||||
| hg19:Y:27591032-T-A hg38:Y:25444885-T-A | P1_Y2 | *** | ||||||
| hg19:Y:27591040-T-G hg38:Y:25444893-T-G | P1_Y2 | *** | ||||||
| hg19:Y:27591056-A-G hg38:Y:25444909-A-G | P1_Y2 | *** | ||||||
| hg19:Y:27591095-T-G hg38:Y:25444948-T-G | P1_Y2 | *** | ||||||
| hg19:Y:27827081-C-T hg38:Y:25680934-C-T | P1_Y2 | *** | ||||||
| hg19:Y:27940342-A-G hg38:Y:25794195-A-G | P1_Y2 | *** | ||||||
| hg19:Y:27940356-C-T hg38:Y:25794209-C-T | P1_Y2 | *** | ||||||
| hg19:Y:28066354-G-A hg38:Y:25920207-G-A | P1_Y2 | *** | ||||||
| hg19:Y:28206885-T-A hg38:Y:26060738-T-A | P1_b4 | *** | ||||||
| hg19:Y:58829060-G-A hg38:Y:56761811-C-T | *** | |||||||
| hg19:Y:58832568-C-G hg38:Y:56758303-G-C | *** | |||||||
| hg19:Y:58839585-C-G hg38:Y:56751286-G-C | *** | |||||||
| hg19:Y:58843675-C-G hg38:Y:56747196-G-C | *** | |||||||
| hg19:Y:58843741-T-C hg38:Y:56747130-A-G | *** | |||||||
| hg19:Y:58848311-T-A hg38:Y:56742560-A-T | *** | |||||||
| hg19:Y:58849290-A-G hg38:Y:56741581-T-C | *** | |||||||
| hg19:Y:58850462-A-T hg38:Y:56740409-T-A | *** | |||||||
| hg19:Y:58861606-A-C hg38:Y:56729265-T-G | *** | |||||||
| hg19:Y:58862544-T-C hg38:Y:56728327-A-G | *** | |||||||
| hg19:Y:58872237-T-G hg38:Y:56718634-A-C | *** | |||||||
| hg19:Y:58872238-T-G hg38:Y:56718633-A-C | *** | |||||||
| hg19:Y:58872346-A-C hg38:Y:56718525-T-G | *** | |||||||
| hg19:Y:58874476-A-C hg38:Y:56716395-T-G | *** | |||||||
| hg19:Y:58879391-G-A hg38:Y:56711480-C-T | *** | |||||||
| hg19:Y:58882813-C-G hg38:Y:56708058-G-C | *** | |||||||
| hg19:Y:58893239-C-A hg38:Y:56697632-G-T | *** | |||||||
| hg19:Y:58895463-T-A hg38:Y:56695408-A-T | *** | |||||||
| hg19:Y:58909146-A-T hg38:Y:56681725-T-A | *** | |||||||
| hg19:Y:58911366-T-C hg38:Y:56679505-A-G | *** | |||||||
| hg19:Y:13476914-GCA-CCC hg38:Y:11321238-GCA-CCC | *** | |||||||
| hg19:Y:13256068-GTG-TTA hg38:Y:11100392-GTG-TTA | *** | |||||||
| hg19:Y:5204641-C-CAGGAAAACAA hg38:Y:5336600-C-CAGGAAAACAA | 22×A | *** | ||||||
| hg19:Y:7287987-GA-TG hg38:Y:7419946-GA-TG | *** | |||||||
| hg19:Y:9131474-AT-CC hg38:Y:9293865-AT-CC | *** | |||||||
| hg19:Y:9929943-CGCAGT-TGGGGG hg38:Y:10092334-CGCAGT-TGGGGG | *** | |||||||
| hg19:Y:10034800-CAT-TGG hg38:Y:10197191-CAT-TGG | *** | |||||||
| hg19:Y:13267779-C-CACT hg38:Y:11112103-C-CACT | *** | |||||||
| hg19:Y:13474805-TATTTGA-AATATGT hg38:Y:11319129-TATTTGA-AATATGT | *** | |||||||
| hg19:Y:13481856-GGTCT-AGTCA hg38:Y:11326180-GGTCT-AGTCA | *** | |||||||
| hg19:Y:13483789-TATTCCTGAC-AATCCTTGAG hg38:Y:11328113-TATTCCTGAC-AATCCTTGAG | *** | |||||||
| hg19:Y:13483824-GTGCGG-TTGTGA hg38:Y:11328148-GTGCGG-TTGTGA | *** | |||||||
| hg19:Y:14425195-C-CAAAAAAA hg38:Y:12304470-C-CAAAAAAA | 15×A | *** | ||||||
| hg19:Y:15179986-C-CAA hg38:Y:13068072-C-CAA | 15×A | *** | ||||||
| hg19:Y:15340383-C-CTTTTTTT hg38:Y:13228501-C-CTTTTTT | 18×T | *** | ||||||
| hg19:Y:15865549-C-CTTTTT hg38:Y:13753669-C-CTTTTT | 22×T | *** | ||||||
| hg19:Y:18447621-G-GTTTTTTTTTTTTT hg38:Y:16335741-G-GTTTTTTTTTTTTT | P6_Dst | 18×T | *** | |||||
| hg19:Y:18454674-TC-T hg38:Y:16342794-TC-T | P6_Dst | *** | ||||||
| hg19:Y:18738825-ATG-GTA hg38:Y:16626945-ATG-GTA | *** | |||||||
| hg19:Y:19128805-G-GAAAAAAAA hg38:Y:17016925-G-GAAAAAAAA | 18×A | *** | ||||||
| hg19:Y:19759517-T-TGG hg38:Y:17647637-T-TGG | P5_Prx | *** | ||||||
| hg19:Y:19762116-GAG-CTC hg38:Y:17650236-GAG-CTC | P5_Prx | *** | ||||||
| hg19:Y:20461551-TCTCC-T hg38:Y:18299665-TCTCC-T | P5_Dst | *** | ||||||
| hg19:Y:22360154-GGGTTTCTG-TTGTGTCT hg38:Y:20198268-GGGTTTCTG-TTGTGTCT | DYZ19 | *** | ||||||
| hg19:Y:22480996-TC-GT hg38:Y:20319110-TC-GT | DYZ19 | *** | ||||||
| hg19:Y:22802868-A-ATTTTTTTTTTTTTT hg38:Y:20640982-A-ATTTTTTTTTTTTTT | 32×T | *** | ||||||
| hg19:Y:23761608-A-AGAAG hg38:Y:21599722-A-AGAAG | 23×AAG | *** | ||||||
| hg19:Y:24425337-A-ATGCC hg38:Y:22279190-A-ATGCC | *** | |||||||
| hg19:Y:24472421-G-GAAAATTT hg38:Y:22326274-G-GAAAATTT | 25×T | *** | ||||||
| hg19:Y:25472012-TTTCC-CTTCT hg38:Y:23325865-TTTCC-CTTCT | P2_r2 | *** | ||||||
| hg19:Y:25845074-GTTTTTTTTT-G hg38:Y:23698927-GTTTTTTTTT-G | P1_b3 | 24×T | *** | |||||
| hg19:Y:26416274-C-CCCAA hg38:Y:24270127-C-CCCAA | P1_Y1 | 24×A | *** | |||||
| hg19:Y:27398510-C-CAAAAAAAAAAA hg38:Y:25252363-C-CAAAAAAAAAAA | P1_g3 | 23×A | *** | |||||
| hg19:Y:27432950-CAAC-AAAA hg38:Y:25286803-CAAC-AAAA | P1_g3 | *** | ||||||
| hg19:Y:27591013-ACATTTCTTT-CTGTTTATTC hg38:Y:25444866-ACATTTCTTT-CTGTTTATTC | P1_Y2 | *** | ||||||
| hg19:Y:27940333-T-TA hg38:Y:25794186-T-TA | P1_Y2 | *** | ||||||
| hg19:Y:28206234-ACT-TAC hg38:Y:26060087-ACT-TAC | P1_b4 | *** | ||||||
| hg19:Y:28491337-A-ACAAACACCCCC hg38:Y:26345190-A-ACAAACACCCCC | *** | |||||||
| hg19:Y:28491340-A-ACACCCCCATC hg38:Y:26345193-A-ACACCCCCATC | *** | |||||||
| hg19:Y:28784274-CA-TG hg38:Y:26638127-CA-TG | *** | |||||||
| hg19:Y:28798940-TAT-AAG hg38:Y:26652793-TAT-AAG | *** | |||||||
| hg19:Y:58838356-GTCT-TTCC hg38:Y:56752512-AGAC-GGAA | *** | |||||||
| hg19:Y:58870599-C-CGAT hg38:Y:56720271-G-GATC | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: N125396 | 10569969 | 7628365 | 7700176 |
| Kit: NGXTX* | 16000000 | 10000000 | 8300000 |
| Used in age calculations | 16000000 | 10000000 | 8300000 |
| Counts of SNPs | 13 | 11 |
* BED data not available. Using default values.
Big Tree Main Page