Tree Position

R-U106/S21 > Z2265 > BY30097 > Z381/S263 > Z301/S499 > L48 > Z9 > Z30/S271 > Z349 > Z2 > ~22277095-G-A > FGC19759 > FGC19766

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRFTDNA
N125396
FGC
NGXTX
hg19:Y:9131518-A-G hg38:Y:9293909-A-G FGC9656 YP4158 Y+**
hg19:Y:5851688-A-G hg38:Y:5983647-A-G FGC19757 ++
hg19:Y:7268474-T-C hg38:Y:7400433-T-C FGC19758 YY++
hg19:Y:15782380-T-C hg38:Y:13670500-T-C FGC19770 YY++
hg19:Y:16852703-T-C hg38:Y:14740823-T-C FGC19772 YY++
hg19:Y:17141862-C-T hg38:Y:15029982-C-T FGC19773 YY++
hg19:Y:17275463-C-T hg38:Y:15163583-C-T A1140 PR2371 YY++
hg19:Y:21969835-C-A hg38:Y:19807949-C-A FGC19778 YY++
hg19:Y:22239358-G-T hg38:Y:20077472-G-T BY42596FGC19779 DYZ19 +**
hg19:Y:28480011-G-C hg38:Y:26333864-G-C FGC19781 **+
hg19:Y:5937074-A-G hg38:Y:6069033-A-G FGC31499 +
hg19:Y:6028966-C-T hg38:Y:6160925-C-T YFS233465 FGC31502 +
hg19:Y:6499535-C-A hg38:Y:6631494-C-A FGC31503 +
hg19:Y:7016501-A-G hg38:Y:7148460-A-G FGC31505 Y+
hg19:Y:16232248-T-C hg38:Y:14120368-T-C FGC31510 YY+
hg19:Y:18968155-C-T hg38:Y:16856275-C-T FGC31511 Y+
hg19:Y:20839015-G-T hg38:Y:18677129-G-T YFS233549 FGC31515 P4_Gap +
hg19:Y:21885831-C-T hg38:Y:19723945-C-T FGC19777 YY+
hg19:Y:17381651-C-T hg38:Y:15269771-C-T FGC31492 Y*
hg19:Y:9736500-T-C hg38:Y:9898891-T-C FGC31506 YFS233488 IR3_Prx ***
hg19:Y:3510250-A-G hg38:Y:3642209-A-G FGC31497 *
hg19:Y:4777787-T-A hg38:Y:4909746-T-A FGC31498 *
hg19:Y:14910979-G-T hg38:Y:12799046-G-T FGC31509 YY*
hg19:Y:18990950-A-G hg38:Y:16879070-A-G FGC31512 YY*
hg19:Y:9131450-G-A hg38:Y:9293841-G-A Z8908ZS350 **
hg19:Y:21337651-G-A hg38:Y:19175765-G-A PF3560 **
hg19:Y:9131437-T-G hg38:Y:9293828-T-G Z8908Z8908 Z4436 **
hg19:Y:9131459-C-G hg38:Y:9293850-C-G Z8908ZS351 YP5308 **
hg19:Y:13319855-T-C hg38:Y:11164179-T-C **
hg19:Y:22236606-C-T hg38:Y:20074720-C-T DYZ19 **
hg19:Y:9131474-A-C hg38:Y:9293865-A-C **
hg19:Y:9131475-T-C hg38:Y:9293866-T-C **
hg19:Y:14319551-ATG-A hg38:Y:12198845-ATG-A **
hg19:Y:18002074-A-G hg38:Y:15890194-A-G FGC7494 P7_Gap **
hg19:Y:7723814-G-A hg38:Y:7855773-G-A YFS233475 ****
hg19:Y:15167971-C-A hg38:Y:13056057-C-A PF7500 **
hg19:Y:13287250-G-A hg38:Y:11131574-G-A **
hg19:Y:15255769-GGTGTGTGTGTGTGT-G hg38:Y:13143855-GGTGTGTGTGTGT-G 24×GT**
hg19:Y:20569614-C-CAAAAA hg38:Y:18407728-C-CAAAAA P5_Dst 33×A**
hg19:Y:19965303-C-CT hg38:Y:17853423-C-CT P5_Prx 10×T***
hg19:Y:25524693-C-CTTTT hg38:Y:23378546-C-CTTTT P1_gr1 33×T***
hg19:Y:58975202-A-T hg38:Y:56829055-A-T ***
hg19:Y:22361657-C-T hg38:Y:20199771-C-T DYZ19 ***
hg19:Y:9198340-C-A hg38:Y:9360731-C-A ***
hg19:Y:13256791-A-C hg38:Y:11101115-A-C ***
hg19:Y:13256773-T-C hg38:Y:11101097-T-C ***
hg19:Y:27432937-C-A hg38:Y:25286790-C-A P1_g3 ***
hg19:Y:58843537-T-G hg38:Y:56747334-A-C ***
hg19:Y:58898602-T-G hg38:Y:56692269-A-C ***
hg19:Y:20332111-C-CAAAAAAAAAAAAAAAAA hg38:Y:18170225-C-CAAAAAAAAAAAAAAAAA P5_Dst 30×A***
hg19:Y:58987211-ATCAC-TTCAT hg38:Y:56841064-ATCAC-TTCAT ***
hg19:Y:13319782-A-T hg38:Y:11164106-A-T ***
hg19:Y:22257118-C-G hg38:Y:20095232-C-G DYZ19 ***
hg19:Y:27151331-A-T hg38:Y:25005184-A-T P1_g3 ***
hg19:Y:58893231-G-C hg38:Y:56697640-C-G ***
hg19:Y:22341971-AGA-TGG hg38:Y:20180085-AGA-TGG DYZ19 ***
hg19:Y:22235093-G-T hg38:Y:20073207-G-T DYZ19 ***
hg19:Y:22252915-T-A hg38:Y:20091029-T-A DYZ19 ***
hg19:Y:22353019-GT-TC hg38:Y:20191133-GT-TC DYZ19 ***
hg19:Y:9429667-C-CAAAA hg38:Y:9592058-C-CAAAA 25×A***
hg19:Y:25472022-TCTTC-T hg38:Y:23325875-TCTTC-T P2_r2 ***
hg19:Y:22232040-C-A hg38:Y:20070154-C-A BY10784 DYZ19 ***
hg19:Y:58909150-G-C hg38:Y:56681721-C-G ***
hg19:Y:58870586-TAATTCGAGCCAC-T hg38:Y:56720272-GGTGGCTCGAATT-G ***
hg19:Y:22226503-G-T hg38:Y:20064617-G-T DYZ19 ***
hg19:Y:22496111-T-G hg38:Y:20334225-T-G DYZ19 ***
hg19:Y:27151329-G-T hg38:Y:25005182-G-T P1_g3 ***
hg19:Y:22496118-TC-GT hg38:Y:20334232-TC-GT DYZ19 ***
hg19:Y:58907314-CTATTCCATT-C hg38:Y:56683547-GAATGGAATA-G ***
hg19:Y:13485089-A-C hg38:Y:11329413-A-C ***
hg19:Y:22292695-G-T hg38:Y:20130809-G-T DYZ19 ***
hg19:Y:58829070-C-A hg38:Y:56761801-G-T ***
hg19:Y:58872240-C-T hg38:Y:56718631-G-A ***
hg19:Y:13482969-TA-CC hg38:Y:11327293-TA-CC ***
hg19:Y:13256068-G-T hg38:Y:11100392-G-T ***
hg19:Y:13460188-C-G hg38:Y:11304512-C-G ***
hg19:Y:13474828-A-G hg38:Y:11319152-A-G ***
hg19:Y:13716396-T-A hg38:Y:11560720-T-A DYZ17 ***
hg19:Y:58876306-A-T hg38:Y:56714565-T-A ***
hg19:Y:22263779-G-A hg38:Y:20101893-G-A DYZ19 ***
hg19:Y:10090635-G-C hg38:Y:10253026-G-C ***
hg19:Y:23801733-C-CAAAA hg38:Y:21639847-C-CAAAA 31×A***
hg19:Y:13256715-G-A hg38:Y:11101039-G-A ***
hg19:Y:58831498-GTTC-ATTT hg38:Y:56759370-GAAC-AAAT ***
hg19:Y:20537954-G-C hg38:Y:18376068-G-C P5_Dst ***
hg19:Y:20537986-C-A hg38:Y:18376100-C-A P5_Dst ***
hg19:Y:22226524-TG-AC hg38:Y:20064638-TG-AC DYZ19 ***
hg19:Y:22491021-C-G hg38:Y:20329135-C-G DYZ19 ***
hg19:Y:13253705-TTCA-CTCT hg38:Y:11098029-TTCA-CTCT ***
hg19:Y:19937284-G-GCCCCCC hg38:Y:17825404-G-GCCCCCC P5_Prx 13×C***
hg19:Y:58823275-CCCATTCCATCTCATTCCATTCCATT-C hg38:Y:56767561-AATGGAATGGAATGGAATGGAATGAG-A ***
hg19:Y:59004624-GAAAGAAAG-G,GAAAGAAAC hg38:Y:56858477-GAAAGAAAG-G,GAAAGAAAC ***
hg19:Y:20127904-T-C hg38:Y:18016024-T-C P5_Dst ***
hg19:Y:58840403-A-T hg38:Y:56750468-T-A ***
hg19:Y:13461950-TGGT-AGGC hg38:Y:11306274-TGGT-AGGC ***
hg19:Y:13483214-GATACT-AATATG hg38:Y:11327538-GATACT-AATATG ***
hg19:Y:13492973-TCCTG-CCTTA hg38:Y:11337297-TCCTG-CCTTA ***
hg19:Y:22366009-GTTG-TTTT hg38:Y:20204123-GTTG-TTTT DYZ19 ***
hg19:Y:22495815-A-C hg38:Y:20333929-A-C DYZ19 ***
hg19:Y:59030791-G-GAA hg38:Y:56884644-G-GAA 10×A***
hg19:Y:59013640-TTTTTT-ATATATA hg38:Y:56867493-TTTTTT-ATATATA ***
hg19:Y:58872331-A-C hg38:Y:56718540-T-G ***
hg19:Y:13480008-CA-TG hg38:Y:11324332-CA-TG ***
hg19:Y:58838389-A-C hg38:Y:56752482-T-G ***
hg19:Y:58877129-T-C hg38:Y:56713742-A-G ***
hg19:Y:22359920-C-A hg38:Y:20198034-C-A DYZ19 ***
hg19:Y:13734082-T-G hg38:Y:11578406-T-G DYZ17 ***
hg19:Y:58872258-G-T hg38:Y:56718613-C-A ***
hg19:Y:58882818-A-C hg38:Y:56708053-T-G ***
hg19:Y:10066965-CCAAC-TCAAT hg38:Y:10229356-CCAAC-TCAAT ***
hg19:Y:58830741-ATG-TTC hg38:Y:56760128-CAT-GAA ***
hg19:Y:13483807-C-T hg38:Y:11328131-C-T ***
hg19:Y:10084308-TA-T hg38:Y:10246699-TA-T ***
hg19:Y:28491339-A-ACACCCCCAT hg38:Y:26345192-A-ACACCCCCAT ***
hg19:Y:10090758-G-T hg38:Y:10253149-G-T ***
hg19:Y:22504362-G-T hg38:Y:20342476-G-T DYZ19 ***
hg19:Y:13503675-ATG-TTA hg38:Y:11347999-ATG-TTA ***
hg19:Y:58829066-TTCCCTTCCG-ATCCCTTCCA hg38:Y:56761796-CGGAAGGGAA-TGGAAGGGAT ***
hg19:Y:20541680-T-C hg38:Y:18379794-T-C P5_Dst ***
hg19:Y:13488843-TG-CC hg38:Y:11333167-TG-CC ***
hg19:Y:19377435-GAAGG-AAAGA hg38:Y:17265555-GAAGG-AAAGA ***
hg19:Y:13475480-C-G hg38:Y:11319804-C-G ***
hg19:Y:6162272-T-G hg38:Y:6294231-T-G IR3_Dst ***
hg19:Y:6162229-A-T hg38:Y:6294188-A-T IR3_Dst ***
hg19:Y:58843581-A-C hg38:Y:56747290-T-G ***
hg19:Y:22334409-A-C hg38:Y:20172523-A-C DYZ19 ***
hg19:Y:58844865-A-C hg38:Y:56746006-T-G ***
hg19:Y:13535673-A-G hg38:Y:11379997-A-G ***
hg19:Y:13140070-ACTCGAGTGCGTGTGATTC-A hg38:Y:10629556-ACTCGAGTGCGTGTGATTC-A ***
hg19:Y:58891342-ATAGCATTCCATTG-A hg38:Y:56699515-GCAATGGAATGCTA-G ***
hg19:Y:22291970-T-G hg38:Y:20130084-T-G DYZ19 ***
hg19:Y:58824858-G-T hg38:Y:56766013-C-A ***
hg19:Y:58877130-G-C hg38:Y:56713741-C-G ***
hg19:Y:22127975-C-CTTTTTTTT hg38:Y:19966089-C-CTTTTTTTT 20×T***
hg19:Y:27432945-C-A hg38:Y:25286798-C-A P1_g3 ***
hg19:Y:13294189-T-C hg38:Y:11138513-T-C ***
hg19:Y:3481514-C-A hg38:Y:3613473-C-A 12×A***
hg19:Y:3663397-G-A hg38:Y:3795356-G-A ***
hg19:Y:6684205-C-CAAAAAA hg38:Y:6816164-C-CAAAAAA 31×A***
hg19:Y:13256963-A-C hg38:Y:11101287-A-C ***
hg19:Y:13351208-T-A hg38:Y:11195532-T-A ***
hg19:Y:22048695-A-AAAT hg38:Y:19886809-A-AAAT 9×AAT***
hg19:Y:58843242-T-G hg38:Y:56747629-A-C ***
hg19:Y:4090893-A-G hg38:Y:4222852-A-G ***
hg19:Y:13463860-CACGCGGGA-GACGTGGGG hg38:Y:11308184-CACGCGGGA-GACGTGGGG ***
hg19:Y:22495758-C-TG hg38:Y:20333872-C-TG DYZ19 ***
hg19:Y:59024004-AAAAAAAAAAAAAAAA-CAAAAAAAAAG hg38:Y:56877857-AAAAAAAAAAAAAAAA-CAAAAAAAAAG ***
hg19:Y:22449750-A-C hg38:Y:20287864-A-C DYZ19 ***
hg19:Y:22449757-T-G hg38:Y:20287871-T-G DYZ19 ***
hg19:Y:58876391-C-A hg38:Y:56714480-G-T ***
hg19:Y:58876402-A-T hg38:Y:56714469-T-A ***
hg19:Y:13258855-T-C hg38:Y:11103179-T-C ***
hg19:Y:22255114-G-A hg38:Y:20093228-G-A DYZ19 ***
hg19:Y:24658495-C-T hg38:Y:22512348-C-T P3_b2 ***
hg19:Y:10034792-T-C hg38:Y:10197183-T-C ***
hg19:Y:6162207-C-G hg38:Y:6294166-C-G IR3_Dst ***
hg19:Y:22456686-A-G hg38:Y:20294800-A-G DYZ19 ***
hg19:Y:6162228-GA-AT hg38:Y:6294187-GA-AT IR3_Dst ***
hg19:Y:10023123-G-C hg38:Y:10185514-G-C ***
hg19:Y:58843642-G-T hg38:Y:56747229-C-A ***
hg19:Y:58862541-C-T hg38:Y:56728330-G-A ***
hg19:Y:13287270-T-A hg38:Y:11131594-T-A ***
hg19:Y:58843642-GC-TT hg38:Y:56747228-GC-AA ***
hg19:Y:58828933-A-C hg38:Y:56761938-T-G ***
hg19:Y:58874490-T-A hg38:Y:56716381-A-T ***
hg19:Y:13140079-CGTGTGATTCCATTAAATCAGA-C hg38:Y:10629565-CGTGTGATTCCATTAAATCAGA-C ***
hg19:Y:58843990-CATTCCATTCGATTTAGTTCGATTCTATTCACTTCCATTTCCATTCG-C hg38:Y:56746825-GGAATGGAATCGAATGGAAATGGAAGTGAATAGAATCGAACTAAATC-G ***
hg19:Y:58861617-A-G hg38:Y:56729254-T-C ***
hg19:Y:22256553-G-T hg38:Y:20094667-G-T BY214425 DYZ19 ******
hg19:Y:22274427-G-C hg38:Y:20112541-G-C DYZ19 ***
hg19:Y:22284119-G-A hg38:Y:20122233-G-A DYZ19 ***
hg19:Y:22288803-A-T hg38:Y:20126917-A-T DYZ19 ***
hg19:Y:22291277-G-A hg38:Y:20129391-G-A DYZ19 ***
hg19:Y:22363438-G-A hg38:Y:20201552-G-A DYZ19 ***
hg19:Y:22467145-C-A hg38:Y:20305259-C-A BY43937 DYZ19 ******
hg19:Y:25932916-C-T hg38:Y:23786769-C-T P1_Y1 ***
hg19:Y:13481879-A-G hg38:Y:11326203-A-G ***
hg19:Y:22491722-T-C hg38:Y:20329836-T-C DYZ19 ***
hg19:Y:58870601-A-T hg38:Y:56720270-T-A ***
hg19:Y:28206234-A-T hg38:Y:26060087-A-T Z21561 P1_b4 ***
hg19:Y:58869873-T-C hg38:Y:56720998-A-G ***
hg19:Y:3006930-T-C hg38:Y:3138889-T-C ***
hg19:Y:3548103-T-C hg38:Y:3680062-T-C ***
hg19:Y:4712646-T-A hg38:Y:4844605-T-A ***
hg19:Y:6162228-G-A hg38:Y:6294187-G-A IR3_Dst ***
hg19:Y:7026698-T-C hg38:Y:7158657-T-C ***
hg19:Y:7120151-T-C hg38:Y:7252110-T-C ***
hg19:Y:7536057-A-G hg38:Y:7668016-A-G ***
hg19:Y:9562011-C-T hg38:Y:9724402-C-T IR3_Prx ***
hg19:Y:9589929-C-A hg38:Y:9752320-C-A IR3_Prx ***
hg19:Y:9589930-T-A hg38:Y:9752321-T-A IR3_Prx ***
hg19:Y:9589935-C-T hg38:Y:9752326-C-T IR3_Prx 9×T***
hg19:Y:9611329-A-T hg38:Y:9773720-A-T IR3_Prx ***
hg19:Y:9986928-G-A hg38:Y:10149319-G-A ***
hg19:Y:10034757-A-G hg38:Y:10197148-A-G ***
hg19:Y:10034760-T-C hg38:Y:10197151-T-C ***
hg19:Y:10034781-A-T hg38:Y:10197172-A-T ***
hg19:Y:10034782-C-A hg38:Y:10197173-C-A ***
hg19:Y:10034788-T-C hg38:Y:10197179-T-C ***
hg19:Y:10090641-G-A hg38:Y:10253032-G-A ***
hg19:Y:10090650-C-G hg38:Y:10253041-C-G ***
hg19:Y:10090657-C-A hg38:Y:10253048-C-A ***
hg19:Y:13105751-T-A hg38:Y:10595237-T-A ***
hg19:Y:13245619-G-A hg38:Y:11089943-G-A ***
hg19:Y:13310740-G-A hg38:Y:11155064-G-A ***
hg19:Y:13319762-A-G hg38:Y:11164086-A-G ***
hg19:Y:13328979-G-T hg38:Y:11173303-G-T ***
hg19:Y:13373097-C-A hg38:Y:11217421-C-A ***
hg19:Y:13390782-C-A hg38:Y:11235106-C-A ***
hg19:Y:13390788-T-C hg38:Y:11235112-T-C ***
hg19:Y:13392034-A-G hg38:Y:11236358-A-G ***
hg19:Y:13481883-C-A hg38:Y:11326207-C-A ***
hg19:Y:13483789-T-A hg38:Y:11328113-T-A ***
hg19:Y:13535701-A-G hg38:Y:11380025-A-G ***
hg19:Y:13696877-A-C hg38:Y:11541201-A-C DYZ17 ***
hg19:Y:13708410-T-G hg38:Y:11552734-T-G DYZ17 ***
hg19:Y:13734071-A-G hg38:Y:11578395-A-G DYZ17 ***
hg19:Y:13735770-G-T hg38:Y:11580094-G-T DYZ17 ***
hg19:Y:14985044-A-C hg38:Y:12873112-A-C ***
hg19:Y:15294098-A-T hg38:Y:13182197-A-T ***
hg19:Y:18274698-G-A hg38:Y:16162818-G-A P6_Prx ***
hg19:Y:18342931-A-T hg38:Y:16231051-A-T P6_Prx ***
hg19:Y:18454668-T-C hg38:Y:16342788-T-C P6_Dst ***
hg19:Y:18537223-T-G hg38:Y:16425343-T-G P6_Dst ***
hg19:Y:19740566-A-T hg38:Y:17628686-A-T P5_Prx ***
hg19:Y:19757139-A-T hg38:Y:17645259-A-T P5_Prx ***
hg19:Y:19759512-G-T hg38:Y:17647632-G-T P5_Prx ***
hg19:Y:19759520-T-G hg38:Y:17647640-T-G P5_Prx ***
hg19:Y:19759525-T-C hg38:Y:17647645-T-C P5_Prx ***
hg19:Y:19759530-G-C hg38:Y:17647650-G-C P5_Prx ***
hg19:Y:19762116-G-C hg38:Y:17650236-G-C P5_Prx ***
hg19:Y:19762117-A-T hg38:Y:17650237-A-T P5_Prx ***
hg19:Y:19762118-G-C hg38:Y:17650238-G-C P5_Prx ***
hg19:Y:20261655-A-T hg38:Y:18099769-A-T P5_Dst ***
hg19:Y:20333196-A-G hg38:Y:18171310-A-G P5_Dst ***
hg19:Y:20333200-A-G hg38:Y:18171314-A-G P5_Dst ***
hg19:Y:20333204-A-G hg38:Y:18171318-A-G P5_Dst ***
hg19:Y:20459067-C-A hg38:Y:18297181-C-A P5_Dst ***
hg19:Y:20461526-A-G hg38:Y:18299640-A-G P5_Dst ***
hg19:Y:20461530-A-G hg38:Y:18299644-A-G P5_Dst ***
hg19:Y:20461550-C-T hg38:Y:18299664-C-T P5_Dst ***
hg19:Y:20461561-T-G hg38:Y:18299675-T-G P5_Dst ***
hg19:Y:20461563-T-G hg38:Y:18299677-T-G P5_Dst ***
hg19:Y:20526465-A-T hg38:Y:18364579-A-T P5_Dst ***
hg19:Y:20526670-C-T hg38:Y:18364784-C-T P5_Dst ***
hg19:Y:20541627-T-G hg38:Y:18379741-T-G P5_Dst ***
hg19:Y:22245029-T-C hg38:Y:20083143-T-C DYZ19 ***
hg19:Y:22273636-C-T hg38:Y:20111750-C-T DYZ19 ***
hg19:Y:22354389-A-T hg38:Y:20192503-A-T DYZ19 ***
hg19:Y:22361651-G-T hg38:Y:20199765-G-T DYZ19 ***
hg19:Y:22420940-T-A hg38:Y:20259054-T-A DYZ19 ***
hg19:Y:22431789-A-G hg38:Y:20269903-A-G DYZ19 ***
hg19:Y:22431824-T-A hg38:Y:20269938-T-A DYZ19 ***
hg19:Y:22449732-C-G hg38:Y:20287846-C-G DYZ19 ***
hg19:Y:22491364-G-T hg38:Y:20329478-G-T DYZ19 ***
hg19:Y:25207942-G-T hg38:Y:23061795-G-T P2_r1 ***
hg19:Y:25207949-C-A hg38:Y:23061802-C-A P2_r1 ***
hg19:Y:25526589-C-T hg38:Y:23380442-C-T P1_gr1 ***
hg19:Y:25526592-C-T hg38:Y:23380445-C-T P1_gr1 ***
hg19:Y:25536772-A-T hg38:Y:23390625-A-T P1_gr1 ***
hg19:Y:25715045-G-A hg38:Y:23568898-G-A P1_b3 ***
hg19:Y:25854911-A-G hg38:Y:23708764-A-G P1_Y1 ***
hg19:Y:27395198-G-T hg38:Y:25249051-G-T P1_g3 ***
hg19:Y:27591032-T-A hg38:Y:25444885-T-A P1_Y2 ***
hg19:Y:27591040-T-G hg38:Y:25444893-T-G P1_Y2 ***
hg19:Y:27591056-A-G hg38:Y:25444909-A-G P1_Y2 ***
hg19:Y:27591095-T-G hg38:Y:25444948-T-G P1_Y2 ***
hg19:Y:27827081-C-T hg38:Y:25680934-C-T P1_Y2 ***
hg19:Y:27940342-A-G hg38:Y:25794195-A-G P1_Y2 ***
hg19:Y:27940356-C-T hg38:Y:25794209-C-T P1_Y2 ***
hg19:Y:28066354-G-A hg38:Y:25920207-G-A P1_Y2 ***
hg19:Y:28206885-T-A hg38:Y:26060738-T-A P1_b4 ***
hg19:Y:58829060-G-A hg38:Y:56761811-C-T ***
hg19:Y:58832568-C-G hg38:Y:56758303-G-C ***
hg19:Y:58839585-C-G hg38:Y:56751286-G-C ***
hg19:Y:58843675-C-G hg38:Y:56747196-G-C ***
hg19:Y:58843741-T-C hg38:Y:56747130-A-G ***
hg19:Y:58848311-T-A hg38:Y:56742560-A-T ***
hg19:Y:58849290-A-G hg38:Y:56741581-T-C ***
hg19:Y:58850462-A-T hg38:Y:56740409-T-A ***
hg19:Y:58861606-A-C hg38:Y:56729265-T-G ***
hg19:Y:58862544-T-C hg38:Y:56728327-A-G ***
hg19:Y:58872237-T-G hg38:Y:56718634-A-C ***
hg19:Y:58872238-T-G hg38:Y:56718633-A-C ***
hg19:Y:58872346-A-C hg38:Y:56718525-T-G ***
hg19:Y:58874476-A-C hg38:Y:56716395-T-G ***
hg19:Y:58879391-G-A hg38:Y:56711480-C-T ***
hg19:Y:58882813-C-G hg38:Y:56708058-G-C ***
hg19:Y:58893239-C-A hg38:Y:56697632-G-T ***
hg19:Y:58895463-T-A hg38:Y:56695408-A-T ***
hg19:Y:58909146-A-T hg38:Y:56681725-T-A ***
hg19:Y:58911366-T-C hg38:Y:56679505-A-G ***
hg19:Y:13476914-GCA-CCC hg38:Y:11321238-GCA-CCC ***
hg19:Y:13256068-GTG-TTA hg38:Y:11100392-GTG-TTA ***
hg19:Y:5204641-C-CAGGAAAACAA hg38:Y:5336600-C-CAGGAAAACAA 22×A***
hg19:Y:7287987-GA-TG hg38:Y:7419946-GA-TG ***
hg19:Y:9131474-AT-CC hg38:Y:9293865-AT-CC ***
hg19:Y:9929943-CGCAGT-TGGGGG hg38:Y:10092334-CGCAGT-TGGGGG ***
hg19:Y:10034800-CAT-TGG hg38:Y:10197191-CAT-TGG ***
hg19:Y:13267779-C-CACT hg38:Y:11112103-C-CACT ***
hg19:Y:13474805-TATTTGA-AATATGT hg38:Y:11319129-TATTTGA-AATATGT ***
hg19:Y:13481856-GGTCT-AGTCA hg38:Y:11326180-GGTCT-AGTCA ***
hg19:Y:13483789-TATTCCTGAC-AATCCTTGAG hg38:Y:11328113-TATTCCTGAC-AATCCTTGAG ***
hg19:Y:13483824-GTGCGG-TTGTGA hg38:Y:11328148-GTGCGG-TTGTGA ***
hg19:Y:14425195-C-CAAAAAAA hg38:Y:12304470-C-CAAAAAAA 15×A***
hg19:Y:15179986-C-CAA hg38:Y:13068072-C-CAA 15×A***
hg19:Y:15340383-C-CTTTTTTT hg38:Y:13228501-C-CTTTTTT 18×T***
hg19:Y:15865549-C-CTTTTT hg38:Y:13753669-C-CTTTTT 22×T***
hg19:Y:18447621-G-GTTTTTTTTTTTTT hg38:Y:16335741-G-GTTTTTTTTTTTTT P6_Dst 18×T***
hg19:Y:18454674-TC-T hg38:Y:16342794-TC-T P6_Dst ***
hg19:Y:18738825-ATG-GTA hg38:Y:16626945-ATG-GTA ***
hg19:Y:19128805-G-GAAAAAAAA hg38:Y:17016925-G-GAAAAAAAA 18×A***
hg19:Y:19759517-T-TGG hg38:Y:17647637-T-TGG P5_Prx ***
hg19:Y:19762116-GAG-CTC hg38:Y:17650236-GAG-CTC P5_Prx ***
hg19:Y:20461551-TCTCC-T hg38:Y:18299665-TCTCC-T P5_Dst ***
hg19:Y:22360154-GGGTTTCTG-TTGTGTCT hg38:Y:20198268-GGGTTTCTG-TTGTGTCT DYZ19 ***
hg19:Y:22480996-TC-GT hg38:Y:20319110-TC-GT DYZ19 ***
hg19:Y:22802868-A-ATTTTTTTTTTTTTT hg38:Y:20640982-A-ATTTTTTTTTTTTTT 32×T***
hg19:Y:23761608-A-AGAAG hg38:Y:21599722-A-AGAAG 23×AAG***
hg19:Y:24425337-A-ATGCC hg38:Y:22279190-A-ATGCC ***
hg19:Y:24472421-G-GAAAATTT hg38:Y:22326274-G-GAAAATTT 25×T***
hg19:Y:25472012-TTTCC-CTTCT hg38:Y:23325865-TTTCC-CTTCT P2_r2 ***
hg19:Y:25845074-GTTTTTTTTT-G hg38:Y:23698927-GTTTTTTTTT-G P1_b3 24×T***
hg19:Y:26416274-C-CCCAA hg38:Y:24270127-C-CCCAA P1_Y1 24×A***
hg19:Y:27398510-C-CAAAAAAAAAAA hg38:Y:25252363-C-CAAAAAAAAAAA P1_g3 23×A***
hg19:Y:27432950-CAAC-AAAA hg38:Y:25286803-CAAC-AAAA P1_g3 ***
hg19:Y:27591013-ACATTTCTTT-CTGTTTATTC hg38:Y:25444866-ACATTTCTTT-CTGTTTATTC P1_Y2 ***
hg19:Y:27940333-T-TA hg38:Y:25794186-T-TA P1_Y2 ***
hg19:Y:28206234-ACT-TAC hg38:Y:26060087-ACT-TAC P1_b4 ***
hg19:Y:28491337-A-ACAAACACCCCC hg38:Y:26345190-A-ACAAACACCCCC ***
hg19:Y:28491340-A-ACACCCCCATC hg38:Y:26345193-A-ACACCCCCATC ***
hg19:Y:28784274-CA-TG hg38:Y:26638127-CA-TG ***
hg19:Y:28798940-TAT-AAG hg38:Y:26652793-TAT-AAG ***
hg19:Y:58838356-GTCT-TTCC hg38:Y:56752512-AGAC-GGAA ***
hg19:Y:58870599-C-CGAT hg38:Y:56720271-G-GATC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: N1253961056996976283657700176
Kit: NGXTX*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs1311
Variant counts last updated 2025-11-20 03:02:29.

* BED data not available. Using default values.


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