Vanderpool
FTDNA: 17293, BigY2: 17293Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 17293 | BigY2 17293 |
---|---|---|---|---|---|---|---|---|---|
18322112-T-C | 16210232-T-C | P6_Prx | *** | A* | |||||
18324700-T-C | 16212820-T-C | P6_Prx | *** | A* | |||||
22290457-T-A | 20128571-T-A | DYZ19 | *** | A* | |||||
26115640-C-T | 23969493-C-T | P1_Y1 | *** | A* | |||||
28816254-G-A | 26670107-G-A | A* | |||||||
13694947-T-G | 11539271-T-G | DYZ17 | A* | ||||||
7695179-G-T | 7827138-G-T | FGC30574 | Y | Y | + | + | |||
8302176-G-A | 8434135-G-A | FGC30577 | Y | Y | + | + | |||
8762996-C-T | 8894955-C-T | FGC30578 | Y | Y | + | + | |||
14140069-C-A | 12019363-C-A | FGC30580 | Y | Y | + | + | |||
14264545-T-C | 12143839-T-C | FGC30581 | Y | Y | + | + | |||
15173175-T-A | 13061261-T-A | FGC30582 | Y | Y | + | + | |||
15439151-G-A | 13327271-G-A | FGC30583 | Y | Y | + | ** | |||
15876838-ATTTTTCTCAAGTGG-A | 13764958-ATTTTTCTCAAGTGG-A | + | *** | ||||||
16170089-TAAG-T | 14058209-TAAG-T | P8_Dst | + | + | |||||
16964354-T-C | 14852474-T-C | FGC30584 | Y | Y | + | + | |||
17851492-G-A | 15739612-G-A | Y42230 | Y | Y | + | + | |||
17945861-T-G | 15833981-T-G | FGC30586 | Y | Y | + | + | |||
18763273-T-C | 16651393-T-C | FGC30587 | Y | Y | + | + | |||
18938523-G-T | 16826643-G-T | FGC30588 | Y | Y | + | + | |||
21051527-C-T | 18889641-C-T | Y43147 | Y | Y | + | + | |||
21557878-T-C | 19395992-T-C | FGC30589 | Y | Y | + | + | |||
22256811-C-G | 20094925-C-G | FGC30590 | DYZ19 | + | + | ||||
22471856-T-G | 20309970-T-G | FGC30591 | DYZ19 | + | + | ||||
22627137-G-C | 20465251-G-C | FGC30592 | Y | Y | + | + | |||
22891560-C-T | 20729674-C-T | FGC30593 | Y | Y | + | + | |||
15773296-G-T | 13661416-G-T | A9838 | Y | Y | * | *** | |||
22281292-G-A | 20119406-G-A | BY12665 | DYZ19 | *** | * | ||||
22319111-G-A | 20157225-G-A | DYZ19 | *** | * | |||||
22447084-T-C | 20285198-T-C | DYZ19 | *** | * | |||||
6721055-T-A | 6853014-T-A | CTS383 | ** | ||||||
6721064-C-T | 6853023-C-T | CTS384 | ** | ||||||
28733101-G-T | 26586954-G-T | ** | ** | ||||||
14050745-C-A | 11930039-C-A | ** | |||||||
14285668-G-A | 12164962-G-A | T | CTS2386 | ** | ** | ||||
15245576-A-G | 13133662-A-G | CTS3890 | ** | ||||||
7093778-A-G | 7225737-A-G | Z15186 | ** | ||||||
9403267-TCATA-T | 9565658-TCATA-T | ** | |||||||
8379062-C-T | 8511021-C-T | FT426416 | ** | ||||||
22300704-T-G | 20138818-T-G | BY216876 | DYZ19 | ** | |||||
2903232-CTCCTTCCTTCCTTCCTTCCT-C | 3035191-CTCCTTCCTTCCTTCCTTCCT-C | 18×TCCT | ** | ||||||
19407606-CTTTTTT-C | 17295726-CTTTTTT-C | 17×T | ** | ||||||
58854648-G-C | 56736223-C-G | ** | |||||||
10935626-C-A | ** | ||||||||
56833280-C-G | ** | ||||||||
17633169-C-A | 15521289-C-A | ** | |||||||
19449358-T-A | 17337478-T-A | Y55908 | ** | ||||||
19143200-C-A | 17031320-C-A | ** | |||||||
28617796-G-T | 26471649-G-T | ** | |||||||
23609996-C-A | 21448110-C-A | ** | |||||||
16897643-CAAAAAA-C | 14785763-CAAAAAA-C | 23×A | ** | ||||||
13349604-A-G | 11193928-A-G | ** | |||||||
13698533-G-C | 11542857-G-C | DYZ17 | ** | ||||||
8976821-A-C | 9139212-A-C | ** | |||||||
15257686-C-A | 13145770-C-A | ** | |||||||
2651898-TTTTTG-T | 2783857-TTTTTG-T | ** | |||||||
24447000-C-A | 22300853-C-A | ** | |||||||
13462344-C-A | 11306668-C-A | ** | |||||||
10971360-G-C | ** | ||||||||
10821947-CTT-C | ** | ||||||||
18172962-C-A | 16061082-C-A | ** | |||||||
5084384-C-A | 5216343-C-A | ** | |||||||
7413528-C-A | 7545487-C-A | ** | |||||||
9074091-C-A | 9236482-C-A | ** | |||||||
15645432-G-T | 13533552-G-T | ** | |||||||
16647391-C-A | 14535511-C-A | ** | |||||||
23260666-C-A | 21098780-C-A | ** | |||||||
20533356-C-A | 18371470-C-A | P5_Dst | ** | ||||||
5956929-C-A | 6088888-C-A | ** | |||||||
22426908-G-T | 20265022-G-T | DYZ19 | ** | ||||||
7990397-C-A | 8122356-C-A | ** | |||||||
15975362-C-A | 13863482-C-A | ** | |||||||
3164779-G-T | 3296738-G-T | ** | |||||||
19302245-C-A | 17190365-C-A | ** | |||||||
15454969-C-A | 13343089-C-A | ** | |||||||
10980475-T-C | ** | ||||||||
17637109-C-A | 15525229-C-A | ** | |||||||
15619960-C-A | 13508080-C-A | ** | |||||||
16277938-C-A | 14166058-C-A | ** | |||||||
20958873-G-T | 18796987-G-T | P4_Dst | ** | ||||||
16852886-C-A | 14741006-C-A | ** | |||||||
23633393-G-A | 21471507-G-A | ** | |||||||
56736265-A-G | ** | ||||||||
17380525-C-A | 15268645-C-A | ** | |||||||
27497076-T-TC | 25350929-T-TC | P1_Y2 | ** | ||||||
14509918-C-A | 12398123-C-A | ** | |||||||
16246134-C-A | 14134254-C-A | ** | |||||||
16497985-C-A | 14386105-C-A | ** | |||||||
19187414-GCA-G | 17075534-GCA-G | ** | |||||||
15503168-C-A | 13391288-C-A | ** | |||||||
8283912-C-A | 8415871-C-A | ** | |||||||
14760882-C-A | 12648951-C-A | ** | |||||||
10808656-C-A | ** | ||||||||
15792623-C-A | 13680743-C-A | ** | |||||||
7305614-C-A | 7437573-C-A | ** | |||||||
16077536-T-A | 13965656-T-A | ** | |||||||
28496367-G-A | 26350220-G-A | ** | |||||||
10017369-C-A | 10179760-C-A | ** | |||||||
19476502-C-A | 17364622-C-A | ** | |||||||
6955293-C-A | 7087252-C-A | ** | |||||||
17153331-C-CT | 15041451-C-CT | 9×T | ** | ||||||
28679558-C-A | 26533411-C-A | ** | |||||||
7641668-C-A | 7773627-C-A | ** | |||||||
23493539-C-A | 21331653-C-A | ** | |||||||
19444270-C-A | 17332390-C-A | ** | |||||||
13505032-C-A | 11349356-C-A | ** | |||||||
14367572-C-A | 12246868-C-A | ** | |||||||
7113670-C-A | 7245629-C-A | ** | |||||||
13224546-C-A | 11068870-C-A | ** | |||||||
22300700-A-G | 20138814-A-G | DYZ19 | ** | ||||||
15857290-C-A | 13745410-C-A | ** | |||||||
14610692-C-A | 12498894-C-A | ** | |||||||
2688981-T-G | 2820940-T-G | ** | |||||||
2708069-A-G | 2840028-A-G | ** | |||||||
2708071-A-C | 2840030-A-C | ** | |||||||
2708074-A-AT | 2840033-A-AT | ** | |||||||
2708081-C-T | 2840040-C-T | ** | |||||||
2708094-A-G | 2840053-A-G | ** | |||||||
2708097-A-G | 2840056-A-G | ** | |||||||
2717089-T-A | 2849048-T-A | ** | |||||||
2746875-C-A | 2878834-C-A | ** | |||||||
2835722-C-A | 2967681-C-A | ** | |||||||
2844385-C-A | 2976344-C-A | ** | |||||||
2850998-C-A | 2982957-C-A | ** | |||||||
2855006-C-A | 2986965-C-A | ** | |||||||
2885780-C-A | 3017739-C-A | ** | |||||||
2948442-C-A | 3080401-C-A | ** | |||||||
2948882-A-C | 3080841-A-C | ** | |||||||
3015831-C-T | 3147790-C-T | ** | |||||||
3093345-T-G | 3225304-T-G | ** | |||||||
3334702-T-A | 3466661-T-A | ** | |||||||
3564310-G-T | 3696269-G-T | ** | |||||||
3693972-G-T | 3825931-G-T | ** | |||||||
3791014-C-A | 3922973-C-A | ** | |||||||
3804476-G-A | 3936435-G-A | ** | |||||||
3815166-C-T | 3947125-C-T | ** | |||||||
3919021-A-G | 4050980-A-G | ** | |||||||
3997075-G-T | 4129034-G-T | ** | |||||||
4002943-C-A | 4134902-C-A | ** | |||||||
4007057-C-G | 4139016-C-G | ** | |||||||
4049536-A-C | 4181495-A-C | ** | |||||||
4062683-A-C | 4194642-A-C | ** | |||||||
4062729-G-T | 4194688-G-T | ** | |||||||
4086480-C-A | 4218439-C-A | ** | |||||||
4103720-C-A | 4235679-C-A | ** | |||||||
4140856-C-A | 4272815-C-A | ** | |||||||
4170402-A-C | 4302361-A-C | ** | |||||||
4229990-A-G | 4361949-A-G | ** | |||||||
4240772-T-C | 4372731-T-C | ** | |||||||
4244663-C-A | 4376622-C-A | ** | |||||||
4293031-T-A | 4424990-T-A | ** | |||||||
4307315-T-G | 4439274-T-G | ** | |||||||
4388657-C-A | 4520616-C-A | ** | |||||||
4389464-G-T | 4521423-G-T | ** | |||||||
4425944-C-A | 4557903-C-A | ** | |||||||
4504752-T-A | 4636711-T-A | ** | |||||||
4580594-T-G | 4712553-T-G | ** | |||||||
4580646-G-T | 4712605-G-T | ** | |||||||
4585605-C-T | 4717564-C-T | ** | |||||||
4840575-C-A | 4972534-C-A | BY58343 | ** | ||||||
4899629-A-C | 5031588-A-C | ** | |||||||
4909007-C-T | 5040966-C-T | ** | |||||||
4918746-A-C | 5050705-A-C | ** | |||||||
4926110-T-C | 5058069-T-C | ** | |||||||
5077824-T-A | 5209783-T-A | ** | |||||||
5118027-G-T | 5249986-G-T | ** | |||||||
5186406-G-A | 5318365-G-A | ** | |||||||
5200101-C-A | 5332060-C-A | ** | |||||||
5243440-C-A | 5375399-C-A | ** | |||||||
5334835-C-G | 5466794-C-G | ** | |||||||
5335785-A-C | 5467744-A-C | ** | |||||||
5412021-C-A | 5543980-C-A | ** | |||||||
5560178-C-A | 5692137-C-A | ** | |||||||
5562432-A-G | 5694391-A-G | ** | |||||||
5622088-TG-T | 5754047-TG-T | ** | |||||||
5622148-T-C | 5754107-T-C | ** | |||||||
5718077-G-A | 5850036-G-A | ** | |||||||
5785848-T-C | 5917807-T-C | ** | |||||||
5890806-A-G | 6022765-A-G | ** | |||||||
5929417-A-G | 6061376-A-G | ** | |||||||
5956415-G-A | 6088374-G-A | ** | |||||||
5997214-A-T | 6129173-A-T | FT126204 | ** | ||||||
6002977-C-A | 6134936-C-A | ** | |||||||
6012977-G-C | 6144936-G-C | ** | |||||||
6231368-G-T | 6363327-G-T | IR3_Dst | ** | ||||||
6287047-G-T | 6419006-G-T | IR3_Dst | ** | ||||||
6341222-CA-C | 6473181-CA-C | IR3_Dst | 15×A | ** | |||||
6353462-C-A | 6485421-C-A | ** | |||||||
6354375-T-A | 6486334-T-A | ** | |||||||
6367441-G-C | 6499400-G-C | ** | |||||||
6490918-C-A | 6622877-C-A | ** | |||||||
6505291-T-G | 6637250-T-G | ** | |||||||
6513353-A-G | 6645312-A-G | ** | |||||||
6607704-C-A | 6739663-C-A | ** | |||||||
6736254-C-T | 6868213-C-T | ** | |||||||
6780802-T-A | 6912761-T-A | ** | |||||||
6801163-A-G | 6933122-A-G | ** | |||||||
6801180-A-T | 6933139-A-T | ** | |||||||
6808705-T-G | 6940664-T-G | ** | |||||||
6829435-C-A | 6961394-C-A | ** | |||||||
6831187-C-A | 6963146-C-A | ** | |||||||
6831900-C-T | 6963859-C-T | ** | |||||||
6850392-G-T | 6982351-G-T | ** | |||||||
6855491-C-A | 6987450-C-A | ** | |||||||
6899655-G-T | 7031614-G-T | ** | |||||||
6913315-C-A | 7045274-C-A | ** | |||||||
6944011-C-G | 7075970-C-G | ** | |||||||
7013265-C-T | 7145224-C-T | ** | |||||||
7063309-A-C | 7195268-A-C | ** | |||||||
7078180-C-A | 7210139-C-A | ** | |||||||
7089850-T-A | 7221809-T-A | ** | |||||||
7091410-T-G | 7223369-T-G | ** | |||||||
7093792-G-T | 7225751-G-T | ** | |||||||
7112466-C-A | 7244425-C-A | ** | |||||||
7113138-C-A | 7245097-C-A | ** | |||||||
7115641-C-T | 7247600-C-T | ** | |||||||
7134630-A-G | 7266589-A-G | ** | |||||||
7139835-G-T | 7271794-G-T | ** | |||||||
7160966-T-G | 7292925-T-G | ** | |||||||
7194345-G-T | 7326304-G-T | ** | |||||||
7213476-C-A | 7345435-C-A | ** | |||||||
7217280-T-C | 7349239-T-C | ** | |||||||
7224042-T-A | 7356001-T-A | ** | |||||||
7228345-C-A | 7360304-C-A | ** | |||||||
7235932-C-A | 7367891-C-A | ** | |||||||
7238808-G-T | 7370767-G-T | ** | |||||||
7242400-C-A | 7374359-C-A | ** | |||||||
7247512-C-A | 7379471-C-A | ** | |||||||
7299688-G-T | 7431647-G-T | ** | |||||||
7317030-C-A | 7448989-C-A | ** | |||||||
7321736-C-A | 7453695-C-A | ** | |||||||
7336164-G-A | 7468123-G-A | ** | |||||||
7362165-G-A | 7494124-G-A | ** | |||||||
7375452-A-T | 7507411-A-T | ** | |||||||
7406573-A-T | 7538532-A-T | ** | |||||||
7415457-C-A | 7547416-C-A | ** | |||||||
7416885-C-A | 7548844-C-A | ** | |||||||
7434142-A-T | 7566101-A-T | ** | |||||||
7450217-C-T | 7582176-C-T | IR1_L | ** | ||||||
7608418-G-T | 7740377-G-T | ** | |||||||
7610351-G-T | 7742310-G-T | ** | |||||||
7650098-C-T | 7782057-C-T | FGC30573 | ** | ||||||
7750690-C-A | 7882649-C-A | ** | |||||||
7756178-T-C | 7888137-T-C | ** | |||||||
7764548-C-A | 7896507-C-A | ** | |||||||
7809409-C-A | 7941368-C-A | ** | |||||||
7816412-A-G | 7948371-A-G | ** | |||||||
7947036-C-A | 8078995-C-A | ** | |||||||
7984281-C-A | 8116240-C-A | ** | |||||||
8036047-G-T | 8168006-G-T | ** | |||||||
8085205-T-C | 8217164-T-C | ** | |||||||
8165038-G-C | 8296997-G-C | ** | |||||||
8165052-A-G | 8297011-A-G | ** | |||||||
8165053-T-C | 8297012-T-C | ** | |||||||
8165061-C-T | 8297020-C-T | ** | |||||||
8165062-A-G | 8297021-A-G | ** | |||||||
8172040-C-A | 8303999-C-A | ** | |||||||
8262681-G-T | 8394640-G-T | ** | |||||||
8269558-A-G | 8401517-A-G | ** | |||||||
8310871-C-A | 8442830-C-A | ** | |||||||
8369551-G-A | 8501510-G-A | ** | |||||||
8385168-C-A | 8517127-C-A | ** | |||||||
8508502-CT-C | 8640461-CT-C | ** | |||||||
8537503-C-A | 8669462-C-A | ** | |||||||
8649512-C-A | 8781471-C-A | ** | |||||||
8653999-C-A | 8785958-C-A | ** | |||||||
8676954-T-C | 8808913-T-C | ** | |||||||
8766361-A-G | 8898320-A-G | ** | |||||||
8846585-G-T | 8978544-G-T | ** | |||||||
8848565-T-C | 8980524-T-C | ** | |||||||
8913450-C-T | 9045409-C-T | ** | |||||||
8914733-T-C | 9046692-T-C | ** | |||||||
9110407-G-T | ** | ||||||||
8974304-C-A | 9136695-C-A | ** | |||||||
8981588-A-C | 9143979-A-C | ** | |||||||
8988771-C-G | 9151162-C-G | ** | |||||||
9014410-G-T | 9176801-G-T | ** | |||||||
9017920-C-A | 9180311-C-A | ** | |||||||
9093291-A-G | 9255682-A-G | ** | |||||||
9366453-C-T | 9528844-C-T | ** | |||||||
9377524-C-T | 9539915-C-T | ** | |||||||
9421258-A-C | 9583649-A-C | ** | |||||||
9440150-C-A | 9602541-C-A | ** | |||||||
9442336-A-G | 9604727-A-G | ** | |||||||
9457226-C-A | 9619617-C-A | ** | |||||||
9459419-T-G | 9621810-T-G | ** | |||||||
9498821-G-A | 9661212-G-A | ** | |||||||
9509810-A-G | 9672201-A-G | ** | |||||||
9519146-A-G | 9681537-A-G | ** | |||||||
9521257-A-C | 9683648-A-C | ** | |||||||
9610492-G-T | 9772883-G-T | IR3_Prx | ** | ||||||
9615091-G-A | 9777482-G-A | IR3_Prx | ** | ||||||
9624643-G-C | 9787034-G-C | IR3_Prx | ** | ||||||
9624690-G-T | 9787081-G-T | IR3_Prx | ** | ||||||
9772034-C-T | 9934425-C-T | ** | |||||||
9798215-C-A | 9960606-C-A | ** | |||||||
9847398-C-T | 10009789-C-T | ** | |||||||
9888846-G-A | 10051237-G-A | ** | |||||||
9918135-G-T | 10080526-G-T | ** | |||||||
9956378-A-AAAG | 10118769-A-AAAG | 8×AAG | ** | ||||||
9959716-A-C | 10122107-A-C | ** | |||||||
9991803-C-T | 10154194-C-T | ** | |||||||
10015552-G-T | 10177943-G-T | ** | |||||||
10023026-C-A | 10185417-C-A | ** | |||||||
10023042-C-A | 10185433-C-A | ** | |||||||
10029938-C-A | 10192329-C-A | ** | |||||||
10034414-G-A | 10196805-G-A | ** | |||||||
10653215-A-G | ** | ||||||||
10653246-C-T | ** | ||||||||
10654220-C-T | ** | ||||||||
10663104-C-A | ** | ||||||||
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21815256-C-A | 19653370-C-A | ** | |||||||
21827907-G-C | 19666021-G-C | ** | |||||||
21853481-A-C | 19691595-A-C | ** | |||||||
21902764-G-A | 19740878-G-A | ** | |||||||
21935210-C-A | 19773324-C-A | ** | |||||||
21989827-C-A | 19827941-C-A | ** | |||||||
21996305-G-T | 19834419-G-T | Y57491 | ** | ||||||
21996322-T-G | 19834436-T-G | ** | |||||||
22027871-G-T | 19865985-G-T | ** | |||||||
22032712-G-T | 19870826-G-T | ** | |||||||
22080393-T-C | 19918507-T-C | ** | |||||||
22169054-G-T | 20007168-G-T | ** | |||||||
22173065-C-A | 20011179-C-A | ** | |||||||
22190695-C-A | 20028809-C-A | ** | |||||||
22191579-A-C | 20029693-A-C | ** | |||||||
22252084-G-T | 20090198-G-T | F7624 FGC28950 | DYZ19 | ** | |||||
22542470-C-A | 20380584-C-A | ** | |||||||
22577080-T-C | 20415194-T-C | ** | |||||||
22584255-T-C | 20422369-T-C | ** | |||||||
22649613-A-G | 20487727-A-G | ** | |||||||
22755632-G-A | 20593746-G-A | ** | |||||||
22788605-G-A | 20626719-G-A | ** | |||||||
22797558-C-G | 20635672-C-G | ** | |||||||
22810162-G-T | 20648276-G-T | ** | |||||||
22812676-T-G | 20650790-T-G | ** | |||||||
22872217-C-A | 20710331-C-A | ** | |||||||
22874618-C-A | 20712732-C-A | Y110015 | ** | ||||||
22936342-C-A | 20774456-C-A | ** | |||||||
22970066-C-A | 20808180-C-A | ** | |||||||
23005295-C-A | 20843409-C-A | ** | |||||||
23007715-C-T | 20845829-C-T | ** | |||||||
23009872-C-A | 20847986-C-A | ** | |||||||
23056187-A-G | 20894301-A-G | ** | |||||||
23059627-C-A | 20897741-C-A | ** | |||||||
23061814-C-T | 20899928-C-T | ** | |||||||
23074679-C-A | 20912793-C-A | ** | |||||||
23100186-C-A | 20938300-C-A | ** | |||||||
23139656-C-A | 20977770-C-A | ** | |||||||
23231606-C-T | 21069720-C-T | ** | |||||||
23232776-C-A | 21070890-C-A | ** | |||||||
23261373-A-C | 21099487-A-C | ** | |||||||
23306563-C-T | 21144677-C-T | ** | |||||||
23350543-A-C | 21188657-A-C | ** | |||||||
23350552-C-A | 21188666-C-A | ** | |||||||
23459919-C-A | 21298033-C-A | ** | |||||||
23460214-G-T | 21298328-G-T | ** | |||||||
23498860-C-A | 21336974-C-A | ** | |||||||
23552806-G-T | 21390920-G-T | ** | |||||||
23745066-A-G | 21583180-A-G | ** | |||||||
23745084-T-C | 21583198-T-C | ** | |||||||
23766759-C-A | 21604873-C-A | ** | |||||||
23779776-G-C | 21617890-G-C | ** | |||||||
23786261-C-A | 21624375-C-A | ** | |||||||
23792361-C-A | 21630475-C-A | ** | |||||||
23849559-C-T | 21687673-C-T | ** | |||||||
23965796-G-T | 21819649-G-T | ** | |||||||
24001331-T-G | 21855184-T-G | ** | |||||||
24309051-T-TC | 22162904-T-TC | P3_t1 | ** | ||||||
24363633-CTTTTTTT-C | 22217486-CTTTTTTT-C | 16×T | ** | ||||||
24382036-C-A | 22235889-C-A | ** | |||||||
24382037-A-G | 22235890-A-G | ** | |||||||
24404002-G-T | 22257855-G-T | ** | |||||||
24445332-C-T | 22299185-C-T | ** | |||||||
24468995-G-C | 22322848-G-C | ** | |||||||
24512248-G-T | 22366101-G-T | ** | |||||||
24604676-G-A | 22458529-G-A | P3_t2 | ** | ||||||
24634209-T-C | 22488062-T-C | P3_t2 | ** | ||||||
25024505-A-G | 22878358-A-G | g1 | ** | ||||||
25200843-AAGAC-A | 23054696-AAGAC-A | g1 | ** | ||||||
25898387-C-A | 23752240-C-A | P1_Y1 | ** | ||||||
26059182-G-T | 23913035-G-T | P1_Y1 | ** | ||||||
26100741-G-T | 23954594-G-T | P1_Y1 | ** | ||||||
26228733-G-A | 24082586-G-A | P1_Y1 | ** | ||||||
26248061-C-A | 24101914-C-A | P1_Y1 | ** | ||||||
26325167-C-A | 24179020-C-A | P1_Y1 | ** | ||||||
26418807-G-T | 24272660-G-T | P1_Y1 | ** | ||||||
26526426-C-T | 24380279-C-T | P1_Y1 | ** | ||||||
26740556-G-T | 24594409-G-T | P1_g2 | ** | ||||||
27030477-G-A | 24884330-G-A | P1_r4 | ** | ||||||
27297708-C-A | 25151561-C-A | P1_g3 | ** | ||||||
27467356-CT-C | 25321209-CT-C | P1_Y2 | ** | ||||||
27676199-C-T | 25530052-C-T | P1_Y2 | ** | ||||||
27862670-A-C | 25716523-A-C | P1_Y2 | ** | ||||||
27936327-A-AG | 25790180-A-AG | P1_Y2 | ** | ||||||
27966801-A-G | 25820654-A-G | P1_Y2 | ** | ||||||
28461087-A-G | 26314940-A-G | ** | |||||||
28469327-A-T | 26323180-A-T | ** | |||||||
28496220-C-A | 26350073-C-A | ** | |||||||
28506703-G-T | 26360556-G-T | ** | |||||||
28518629-C-A | 26372482-C-A | ** | |||||||
28581019-T-C | 26434872-T-C | ** | |||||||
28631713-C-T | 26485566-C-T | ** | |||||||
28653431-C-G | 26507284-C-G | ** | |||||||
28657941-G-T | 26511794-G-T | ** | |||||||
28714827-C-A | 26568680-C-A | ** | |||||||
28714847-C-A | 26568700-C-A | ** | |||||||
28768294-C-A | 26622147-C-A | ** | |||||||
28772775-C-A | 26626628-C-A | ** | |||||||
28776767-C-T | 26630620-C-T | ** | |||||||
28778313-C-A | 26632166-C-A | ** | |||||||
28779867-C-A | 26633720-C-A | ** | |||||||
56736213-G-C | ** | ||||||||
56827667-C-A | ** | ||||||||
56840526-G-T | ** | ||||||||
56841158-G-A | ** | ||||||||
56841167-C-G | ** | ||||||||
56841185-G-A | ** | ||||||||
56841186-G-T | ** | ||||||||
56841190-CT-C | ** | ||||||||
56844430-TCTCTTGTCTAGG-T | ** | ||||||||
56861827-A-AG | ** | ||||||||
36943-G-C | ** | ||||||||
13647838-T-G | 11492162-T-G | DYZ17 | *** | ||||||
58908830-C-T | 56682041-G-A | *** | |||||||
13867507-G-A | 11746801-G-A | DYZ17 | *** | ||||||
13653040-T-A | 11497364-T-A | DYZ17 | *** | ||||||
13653039-T-A | 11497363-T-A | DYZ17 | *** | ||||||
13818823-T-G | 11698117-T-G | DYZ17 | *** | ||||||
24905127-AAT-A | 22758980-AAT-A | g1 | 9×AT | *** | |||||
13701304-T-G | 11545628-T-G | DYZ17 | *** | ||||||
13454010-A-C,T | 11298334-A-C,T | *** | |||||||
13195097-T-C | 11039421-T-C | *** | |||||||
13803072-A-G | 11682366-A-G | DYZ17 | *** | ||||||
13448853-A-C,T | 11293177-A-C,T | *** | |||||||
28799786-CGGAGT-C | 26653639-CGGAGT-C | 4×GGAGT | *** | ||||||
13865765-G-C | 11745059-G-C | DYZ17 | *** | ||||||
13801215-A-T | 11680509-A-T | DYZ17 | *** | ||||||
13865965-G-A | 11745259-G-A | DYZ17 | *** | ||||||
13703875-A-G | 11548199-A-G | DYZ17 | *** | ||||||
58980834-G-A | 56834687-G-A | *** | |||||||
58973871-T-C | 56827724-T-C | *** | |||||||
59004616-G-A | 56858469-G-A | *** | |||||||
13454028-T-C | 11298352-T-C | *** | |||||||
13867505-T-C | 11746799-T-C | DYZ17 | *** | ||||||
14748821-C-T | 12636890-C-T | *** | |||||||
16447158-AACACACACAC-A | 14335278-AACACACACAC-A | 22×AC | *** | ||||||
14589772-T-C | 12477972-T-C | *** | |||||||
13447550-T-A,G | 11291874-T-A,G | *** | |||||||
13452879-C-G | 11297203-C-G | *** | |||||||
13454816-C-G | 11299140-C-G | *** | |||||||
13459007-ATTCTATCCCG-A | 11303331-ATTCTATCCCG-A | *** | |||||||
13664453-C-T | 11508777-C-T | DYZ17 | *** | ||||||
13843782-A-G | 11723076-A-G | DYZ17 | *** | ||||||
13865755-G-C | 11745049-G-C | DYZ17 | *** | ||||||
13865759-AG-A | 11745053-AG-A | DYZ17 | *** | ||||||
19569211-AT-A | 17457331-AT-A | P5_Prx | *** | ||||||
19964725-A-G | 17852845-A-G | P5_Prx | *** | ||||||
20497572-C-T | 18335686-C-T | P5_Dst | 30×T | *** | |||||
22254564-A-G | 20092678-A-G | DYZ19 | *** | ||||||
22490739-G-T | 20328853-G-T | DYZ19 | *** | ||||||
25089009-T-C | 22942862-T-C | g1 | *** | ||||||
25313409-A-T | 23167262-A-T | P2_r1 | *** | ||||||
28786719-G-GATTGGAGTC | 26640572-G-GATTGGAGTC | *** | |||||||
13842621-A-G,T | 11721915-A-G,T | DYZ17 | *** | ||||||
13652187-C-A,G | 11496511-C-A,G | DYZ17 | *** | ||||||
58980777-TTTCAC-C,T | 56834630-TTTCAC-C,T | *** | |||||||
23804390-C-T | 21642504-C-T | FGC49721 | *** | ||||||
16749952-C-A | 14638072-C-A | *** | |||||||
9852489-C-A | 10014880-C-A | *** | |||||||
6516602-C-A | 6648561-C-A | *** | |||||||
17118990-G-GT | 15007110-G-GT | 9×T | *** | ||||||
10971340-G-C | *** | ||||||||
5957043-C-A | 6089002-C-A | *** | |||||||
10953993-C-A | *** | ||||||||
10971328-A-G | *** | ||||||||
10971332-A-C | *** | ||||||||
22893304-CCTTTCTTTCTTT-C,CCTTT | 20731418-CCTTTCTTTCTTT-C,CCTTT | 17×CTTT | *** | ||||||
14017766-C-A | 11897060-C-A | *** | |||||||
21149001-A-AT | 18987115-A-AT | 9×T | *** | ||||||
56826380-G-T | *** | ||||||||
2809705-CTTAT-C | 2941664-CTTAT-C | 4×TTAT | *** | ||||||
14819770-C-A | 12707837-C-A | *** | |||||||
2704287-C-A | 2836246-C-A | *** | |||||||
2803960-G-T | 2935919-G-T | *** | |||||||
2844395-C-A | 2976354-C-A | *** | |||||||
2873750-A-G | 3005709-A-G | *** | |||||||
2884717-AT-A | 3016676-AT-A | *** | |||||||
3178736-C-A | 3310695-C-A | *** | |||||||
4444572-G-T | 4576531-G-T | *** | |||||||
5367931-G-T | 5499890-G-T | *** | |||||||
5586829-C-T | 5718788-C-T | *** | |||||||
6133646-C-T | 6265605-C-T | *** | |||||||
6787177-G-A | 6919136-G-A | *** | |||||||
6803791-C-A | 6935750-C-A | *** | |||||||
6803936-C-A | 6935895-C-A | *** | |||||||
6947294-C-A | 7079253-C-A | *** | |||||||
7032333-ATTTTT-A | 7164292-ATTTTT-A | 22×T | *** | ||||||
7156814-G-T | 7288773-G-T | *** | |||||||
7314796-AT-A | 7446755-AT-A | 9×T | *** | ||||||
7387435-C-A | 7519394-C-A | *** | |||||||
7607057-G-T | 7739016-G-T | *** | |||||||
7657510-C-A | 7789469-C-A | *** | |||||||
7759990-G-T | 7891949-G-T | *** | |||||||
7809481-G-T | 7941440-G-T | *** | |||||||
8013547-C-A | 8145506-C-A | *** | |||||||
8026919-CTTTT-C | 8158878-CTTTT-C | 14×T | *** | ||||||
8187035-C-A | 8318994-C-A | *** | |||||||
8201901-C-A | 8333860-C-A | *** | |||||||
8228495-C-A | 8360454-C-A | *** | |||||||
8250896-C-A | 8382855-C-A | *** | |||||||
8263459-C-A | 8395418-C-A | *** | |||||||
8311051-T-C | 8443010-T-C | *** | |||||||
8431497-C-A | 8563456-C-A | *** | |||||||
8436877-C-A | 8568836-C-A | *** | |||||||
8521155-C-A | 8653114-C-A | *** | |||||||
9088717-G-T | 9251108-G-T | *** | |||||||
9119055-G-A | 9281446-G-A | *** | |||||||
9130058-G-T | 9292449-G-T | *** | |||||||
9386173-G-T | 9548564-G-T | *** | |||||||
9427844-G-C | 9590235-G-C | *** | |||||||
9560156-A-G | 9722547-A-G | IR3_Prx | *** | ||||||
9760531-C-A | 9922922-C-A | *** | |||||||
9798063-GTT-G,GT | 9960454-GTT-G,GT | 17×T | *** | ||||||
9874154-G-A | 10036545-G-A | *** | |||||||
10009810-C-A | 10172201-C-A | *** | |||||||
10013768-TGGTAAAA-T | 10176159-TGGTAAAA-T | *** | |||||||
10026636-C-A | 10189027-C-A | *** | |||||||
10037546-C-A | 10199937-C-A | *** | |||||||
10764541-TGCCATTTTCAC-T,TTCCATT | *** | ||||||||
10789969-T-G | *** | ||||||||
10961416-C-T | *** | ||||||||
10961429-T-A | *** | ||||||||
10964722-C-A | *** | ||||||||
10971326-C-T | *** | ||||||||
10971327-A-T | *** | ||||||||
11002058-C-T | *** | ||||||||
11033212-GCATTC-G | *** | ||||||||
11037977-C-A | *** | ||||||||
13211872-C-A | 11056196-C-A | *** | |||||||
13287492-C-A | 11131816-C-A | *** | |||||||
13308934-C-A | 11153258-C-A | *** | |||||||
13462122-A-T | 11306446-A-T | *** | |||||||
13465526-C-A | 11309850-C-A | *** | |||||||
13466112-A-G | 11310436-A-G | *** | |||||||
13470369-T-C | 11314693-T-C | *** | |||||||
13597601-C-A | 11441925-C-A | *** | |||||||
13644855-T-C | 11489179-T-C | *** | |||||||
13645443-T-A | 11489767-T-A | *** | |||||||
11643162-T-A | DYZ17 | *** | |||||||
13804407-C-A | 11683701-C-A | DYZ17 | *** | ||||||
13902687-C-A | 11781981-C-A | *** | |||||||
14109316-CTTT-C,CTT | 11988610-CTTT-C,CTT | 14×T | *** | ||||||
14175217-A-G | 12054511-A-G | *** | |||||||
14181467-G-T | 12060761-G-T | *** | |||||||
14198104-C-A | 12077398-C-A | *** | |||||||
14220113-C-A | 12099407-C-A | *** | |||||||
14229643-C-A | 12108937-C-A | *** | |||||||
14242398-ATGATATGATA-A,ATGATATGATG | 12121692-ATGATATGATA-A,ATGATATGATG | *** | |||||||
14250426-G-T | 12129720-G-T | *** | |||||||
14252728-C-A | 12132022-C-A | *** | |||||||
14280041-C-A | 12159335-C-A | *** | |||||||
14317896-C-A | 12197190-C-A | *** | |||||||
14390424-C-A | 12269720-C-A | *** | |||||||
14439212-C-A | 12318485-C-A | *** | |||||||
14481592-T-A | 12360861-T-A | *** | |||||||
14486909-C-T | 12366178-C-T | *** | |||||||
14520893-C-A | 12409094-C-A | *** | |||||||
14600756-C-A | 12488956-C-A | *** | |||||||
14600765-C-A | 12488965-C-A | *** | |||||||
14780780-C-A | 12668850-C-A | *** | |||||||
14853062-G-T | 12741128-G-T | *** | |||||||
15012296-CTTT-C,CTTTT | 12900384-CTTT-C,CTTTT | 17×T | *** | ||||||
15428268-C-A | 13316388-C-A | *** | |||||||
15572545-C-A | 13460665-C-A | *** | |||||||
15573472-C-A | 13461592-C-A | *** | |||||||
15728014-C-A | 13616134-C-A | *** | |||||||
15741840-C-A | 13629960-C-A | *** | |||||||
15868085-C-A | 13756205-C-A | *** | |||||||
15946920-C-A | 13835040-C-A | *** | |||||||
15993958-C-A | 13882078-C-A | *** | |||||||
16040802-CTTTT-C,CT | 13928922-CTTTT-C,CT | 16×T | *** | ||||||
16228841-C-A | 14116961-C-A | *** | |||||||
16404227-C-A | 14292347-C-A | *** | |||||||
16612061-C-A | 14500181-C-A | *** | |||||||
16665853-C-A | 14553973-C-A | *** | |||||||
16667319-C-A | 14555439-C-A | *** | |||||||
16841864-C-A | 14729984-C-A | *** | |||||||
16904470-C-A | 14792590-C-A | *** | |||||||
16921529-G-T | 14809649-G-T | *** | |||||||
17014149-C-A | 14902269-C-A | *** | |||||||
17091180-C-A | 14979300-C-A | *** | |||||||
17192717-C-A | 15080837-C-A | *** | |||||||
17296814-A-G | 15184934-A-G | *** | |||||||
17338938-A-G | 15227058-A-G | *** | |||||||
17370675-TG-T | 15258795-TG-T | *** | |||||||
17380898-C-A | 15269018-C-A | Y98982 | *** | ||||||
17509664-G-T | 15397784-G-T | *** | |||||||
17571734-TG-T | 15459854-TG-T | *** | |||||||
17723078-G-T | 15611198-G-T | *** | |||||||
17749210-C-A | 15637330-C-A | *** | |||||||
17749746-C-A | 15637866-C-A | *** | |||||||
17817844-C-A | 15705964-C-A | *** | |||||||
17914500-A-G | 15802620-A-G | *** | |||||||
17951539-C-A | 15839659-C-A | *** | |||||||
17972821-C-A | 15860941-C-A | *** | |||||||
18060345-C-CAT | 15948465-C-CAT | *** | |||||||
18673606-T-C | 16561726-T-C | *** | |||||||
18709162-C-A | 16597282-C-A | *** | |||||||
19162217-GCAGCTAGATAAATTACATGTCT-G | 17050337-GCAGCTAGATAAATTACATGTCT-G | *** | |||||||
19226651-C-A | 17114771-C-A | *** | |||||||
19241345-AG-A | 17129465-AG-A | *** | |||||||
19244515-C-A | 17132635-C-A | *** | |||||||
19529116-CTTTTT-C | 17417236-CTTTTT-C | 14×T | *** | ||||||
20865487-GTATATA-G,GTATA | 18703601-GTATATA-G,GTATA | P4_Dst | 9×TA | *** | |||||
21092391-C-A | 18930505-C-A | *** | |||||||
21201428-C-A | 19039542-C-A | BY131053 | *** | ||||||
21265163-C-A | 19103277-C-A | *** | |||||||
21356876-G-A | 19194990-G-A | *** | |||||||
21455922-C-A | 19294036-C-A | *** | |||||||
21768773-C-T | 19606887-C-T | *** | |||||||
21909699-C-A | 19747813-C-A | *** | |||||||
21963575-A-T | 19801689-A-T | *** | |||||||
22252332-T-C | 20090446-T-C | DYZ19 | *** | ||||||
22723650-C-A | 20561764-C-A | *** | |||||||
22926884-C-A | 20764998-C-A | *** | |||||||
23042888-C-A | 20881002-C-A | *** | |||||||
23335792-C-A | 21173906-C-A | *** | |||||||
23350467-C-A | 21188581-C-A | *** | |||||||
23561582-C-A | 21399696-C-A | *** | |||||||
23579479-A-C | 21417593-A-C | *** | |||||||
23762825-C-A | 21600939-C-A | *** | |||||||
23804371-C-T | 21642485-C-T | *** | |||||||
23985528-C-A | 21839381-C-A | *** | |||||||
24001394-CT-C | 21855247-CT-C | *** | |||||||
24446463-C-A | 22300316-C-A | *** | |||||||
27216673-C-A | 25070526-C-A | P1_g3 | *** | ||||||
28803595-G-T | 26657448-G-T | *** | |||||||
56830028-C-A | *** | ||||||||
56833805-CA-C | *** | ||||||||
56833808-C-CG | *** | ||||||||
56846302-G-T | *** | ||||||||
36032-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.