Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Names	Region	McDonald BED	combBED	STR	FTDNA B15548	BigY2 B15548
19903369-A-G	17791489-A-G		P5_Prx				***	A*
20636349-T-G	18474463-T-G		P4_Prx				***	A*
19728331-A-AT	17616451-A-AT		P5_Prx			10×T		A*
19618119-G-C	17506239-G-C		P5_Prx	Y				A*
28817483-A-C	26671336-A-C							A*
3965552-C-G	4097511-C-G	BY57928					**	+
7250911-A-G	7382870-A-G	BY64195		Y	Y		+	+
7328061-TG-T	7460020-TG-T						+	+
7434667-C-G	7566626-C-G	BY50707		Y			+	+
7601809-G-C	7733768-G-C	BY50710		Y	Y		+	+
8644806-A-T	8776765-A-T	BY74884		Y	Y		+	+
8685626-T-C	8817585-T-C	BY75190		Y	Y		+	+
9475155-G-A	9637546-G-A	BY35004					+	+
9881080-G-C	10043471-G-C	BY81733		Y	Y		+	+
9987233-G-A	10149624-G-A	BY82529		Y			+	+
14205549-G-A	12084843-G-A	ZS3180		Y	Y		+	+
14578302-G-T	12466502-G-T	BY96558		Y	Y		+	+
15028416-G-T	12916504-G-T	BY99227		Y	Y		+	+
15907139-G-C	13795259-G-C	BY50781		Y	Y		+	+
15990008-A-G	13878128-A-G	BY35006		Y	Y		+	+
16173052-G-C	14061172-G-C	BY105726		Y			+	+
16420359-C-T	14308479-C-T	BY47162		Y	Y		+	+
17985502-G-T	15873622-G-T	BY50804		Y			+	+
17985503-T-C	15873623-T-C	BY50805		Y			+	+
19321494-G-A	17209614-G-A	BY128251		Y	Y		+	+
21784370-C-G	19622484-C-G	BY35010		Y	Y		+	+
21930494-C-G	19768608-C-G	BY50847		Y	Y		+	+
22074248-G-T	19912362-G-T	BY50849		Y	Y		+	+
22487189-A-C	20325303-A-C		DYZ19				+	+
22569188-TAGAA-T	20407302-TAGAA-T						+	+
22825456-A-G	20663570-A-G	BY35012		Y	Y		+	+
23380156-TTTTA-T	21218270-TTTTA-T					4×TTTA	+	**
24372677-A-G	22226530-A-G	BY149428					+	+
24453727-C-T	22307580-C-T	BY150055			Y		+	+
18740863-AATATATATATAATATATATAGTAGTGTATATATATACACTACT-A	16628983-AATATATATATAATATATATAGTAGTGTATATATATACACTACT-A						+	+
21661512-GTTTC-G	19499626-GTTTC-G						+	+
23552353-TG-T	21390467-TG-T						+	+
19812764-T-C	17700884-T-C	BY35013	P5_Prx					+
22486958-G-A	20325072-G-A	BY50872	DYZ19					+
	13328-G-A							+
9654352-TAGAAAGAA-T	9816743-TAGAAAGAA-T		IR3_Prx			10×AGAA	***	*
17239290-TTATATA-T	15127410-TTATATA-T					17×TA		*
22299485-G-A	20137599-G-A		DYZ19				***	*
22429353-C-T	20267467-C-T		DYZ19				***	*
26092063-T-C	23945916-T-C		P1_Y1				***	*
13695154-G-C	11539478-G-C		DYZ17					*
15324347-A-T	13212465-A-T							**
58978993-G-T	56832846-G-T							**
19462180-T-C	17350300-T-C	CTS10451 FGC40					**	**
19319834-GTATATA-G	17207954-GTATATA-G					23×TA		**
3195408-C-A	3327367-C-A							**
9927601-G-A	10089992-G-A	Y17183						**
17081219-C-CTA	14969339-C-CTA					14×TA		**
15912133-C-A	13800253-C-A							**
15862522-C-A	13750642-C-A							**
22166584-G-T	20004698-G-T							**
23311204-TTTCC-T	21149318-TTTCC-T					11×TTCC		**
16692757-G-GA	14580877-G-GA					27×A		**
22321560-G-A	20159674-G-A	FT6526	DYZ19				**	**
13855300-G-T	11734594-G-T		DYZ17					**
22486969-T-G	20325083-T-G	BY224866	DYZ19					**
6461477-C-A	6593436-C-A							**
	10821876-C-T							**
	11655808-T-TTGGAA		DYZ17					**
5977005-C-A	6108964-C-A							**
20888603-AG-A	18726717-AG-A		P4_Dst					**
17802162-TCAG-T	15690282-TCAG-T							**
	10750998-C-A							**
14887925-AT-A	12775991-AT-A					10×T		**
15918564-C-A	13806684-C-A							**
24405854-C-A	22259707-C-A							**
16860748-GCA-G	14748868-GCA-G							**
	10879046-C-A							**
15324352-TA-T	13212470-TA-T							**
	10935579-C-CTGCCA							**
4049753-C-A	4181712-C-A							**
24509266-C-A	22363119-C-A							**
19346738-A-G	17234858-A-G							**
7397551-C-A	7529510-C-A							**
19129582-C-A	17017702-C-A							**
21394796-C-A	19232910-C-A							**
	10849723-T-C							**
	10849763-C-A	FT434030						**
13576115-C-T	11420439-C-T							**
	10807277-A-T							**
7103416-C-A	7235375-C-A							**
	10934769-T-A							**
26231028-G-GTGCGTATC	24084881-G-GTGCGTATC		P1_Y1					**
16484314-C-A	14372434-C-A							**
19746884-TG-T	17635004-TG-T		P5_Prx					**
20798749-GAAAA-G	18636863-GAAAA-G		P4_Prx			13×A		**
18370849-T-TG	16258969-T-TG		P6_Prx					**
16462441-C-A	14350561-C-A							**
	10946816-C-A							**
5186324-G-T	5318283-G-T							**
26415749-G-GTT	24269602-G-GTT		P1_Y1			14×T		**
13489015-C-A	11333339-C-A							**
23439929-A-T	21278043-A-T							**
	10934728-T-C							**
	10624427-G-T							**
13705484-T-G	11549808-T-G		DYZ17					**
2772494-C-A	2904453-C-A							**
21515837-T-G	19353951-T-G							**
	11004944-C-A							**
	10751023-C-CGGGTT							**
14546502-C-A	12434703-C-A							**
6816749-C-A	6948708-C-A							**
17065137-G-A	14953257-G-A							**
13811071-A-ATGAAT	11690365-A-ATGAAT		DYZ17					**
	10764550-CA-C							**
4389588-C-T	4521547-C-T							**
	10764553-TCCA-T							**
16941737-C-A	14829857-C-A							**
	10992682-C-A							**
22166578-G-T	20004692-G-T							**
17871802-C-A	15759922-C-A							**
23438262-T-A	21276376-T-A							**
24553401-C-A	22407254-C-A		P3_t2					**
15430346-C-A	13318466-C-A							**
	10973964-A-T							**
	10973991-C-A							**
	10973992-C-A							**
	10974013-A-C							**
	10974034-T-A							**
	10974035-T-A							**
	10825192-T-G							**
	10825206-AC-T							**
21974868-C-A	19812982-C-A							**
4788353-C-A	4920312-C-A							**
27971720-G-A	25825573-G-A		P1_Y2					**
	11031676-C-A							**
2845817-G-T	2977776-G-T							**
	10934731-T-C							**
	10934732-A-T							**
14387718-C-A	12267014-C-A							**
19535707-C-A	17423827-C-A							**
2697389-C-A	2829348-C-A							**
9965501-G-T	10127892-G-T							**
16424478-G-T	14312598-G-T							**
7028025-C-A	7159984-C-A							**
18266210-TAA-T	16154330-TAA-T					11×A		**
9971726-G-T	10134117-G-T							**
15533725-C-A	13421845-C-A							**
24389942-G-C	22243795-G-C							**
14372014-T-C	12251310-T-C							**
14413072-G-A	12292369-G-A							**
9446171-C-A	9608562-C-A							**
13209552-C-A	11053876-C-A							**
	10859082-T-C							**
6475346-C-A	6607305-C-A							**
23997529-C-A	21851382-C-A							**
13705500-G-C	11549824-G-C		DYZ17					**
16058797-C-A	13946917-C-A							**
23316118-C-A	21154232-C-A	Y128960						**
18262526-C-A	16150646-C-A							**
22951169-C-A	20789283-C-A							**
16424327-G-T	14312447-G-T							**
14567146-C-A	12455346-C-A							**
28480318-C-A	26334171-C-A							**
16038117-C-A	13926237-C-A							**
	10686498-T-A							**
10023481-C-A	10185872-C-A							**
14383792-G-T	12263088-G-T							**
2948214-C-A	3080173-C-A							**
22962093-C-A	20800207-C-A							**
8214947-C-A	8346906-C-A							**
	10849712-C-A							**
14356472-C-A	12235767-C-A							**
14402036-CA-C	12281333-CA-C					8×A		**
6454068-T-G	6586027-T-G							**
21148588-TCAAAA-T	18986702-TCAAAA-T							**
3573348-G-T	3705307-G-T							**
8766405-C-A	8898364-C-A							**
8644323-GCA-G	8776282-GCA-G							**
	10887996-C-G							**
20330486-G-T	18168600-G-T		P5_Dst					**
14227671-G-A	12106965-G-A							**
19187416-AC-T	17075536-AC-T							**
2730122-T-C	2862081-T-C							**
7185439-C-A	7317398-C-A							**
13259054-C-A	11103378-C-A	FT441997						**
15012552-G-A	12900640-G-A							**
22166564-TG-T	20004678-TG-T							**
15201467-C-A	13089553-C-A							**
6645471-C-A	6777430-C-A							**
20440391-G-GTTT	18278505-G-GTTT		P5_Dst					**
16342387-AAAAG-A	14230507-AAAAG-A					4×AAAG		**
4672515-C-A	4804474-C-A							**
14099779-G-A	11979073-G-A	FT281401						**
6776106-C-A	6908065-C-A							**
28521111-C-A	26374964-C-A							**
3876985-C-A	4008944-C-A							**
	11676409-T-A		DYZ17					**
14484360-C-A	12363629-C-A							**
28745804-G-T	26599657-G-T							**
14350212-T-C	12229507-T-C							**
	10671137-C-A							**
17158607-C-A	15046727-C-A							**
	10661346-C-A							**
13201998-C-A	11046322-C-A							**
8981589-A-C	9143980-A-C							**
19512135-C-A	17400255-C-A							**
2895142-C-T	3027101-C-T							**
	10694055-C-A							**
17479975-C-A	15368095-C-A							**
20769443-A-ATGTC	18607557-A-ATGTC		P4_Prx					**
	10969818-C-A							**
15374505-C-A	13262625-C-A							**
	10878949-C-A							**
	10669656-C-A							**
21748245-C-A	19586359-C-A							**
16070162-C-A	13958282-C-A							**
	10685845-G-T							**
	10683693-T-C							**
2895150-C-T	3027109-C-T							**
23199780-C-A	21037894-C-A							**
	10821900-T-A							**
9030328-GA-G	9192719-GA-G							**
	56841575-C-A							**
13474781-C-A	11319105-C-A							**
3328888-C-A	3460847-C-A							**
17446888-C-T	15335008-C-T	FTB11693						**
2706669-CAA-C	2838628-CAA-C							**
2785310-C-A	2917269-C-A							**
2895155-T-C	3027114-T-C							**
2895159-A-T	3027118-A-T							**
2984613-C-A	3116572-C-A							**
3008386-T-C	3140345-T-C							**
3152118-C-A	3284077-C-A							**
3279390-C-A	3411349-C-A							**
3349043-G-T	3481002-G-T							**
3500573-G-A	3632532-G-A							**
3545810-G-T	3677769-G-T							**
3569601-A-T	3701560-A-T							**
3599693-C-A	3731652-C-A							**
3604234-G-T	3736193-G-T							**
3629828-C-T	3761787-C-T							**
3877030-C-T	4008989-C-T							**
3890853-G-T	4022812-G-T							**
3996996-C-A	4128955-C-A							**
3997059-C-A	4129018-C-A							**
4310118-A-AT	4442077-A-AT					9×T		**
4310167-G-T	4442126-G-T							**
4403094-C-A	4535053-C-A							**
4403098-C-A	4535057-C-A							**
4444890-G-A	4576849-G-A							**
4558797-G-T	4690756-G-T							**
4585560-A-G	4717519-A-G							**
4687459-C-A	4819418-C-A							**
4766655-G-T	4898614-G-T							**
4768624-A-G	4900583-A-G							**
5061227-A-T	5193186-A-T							**
5241138-T-C	5373097-T-C							**
5412103-C-A	5544062-C-A							**
5435190-C-T	5567149-C-T							**
5566776-C-A	5698735-C-A							**
5607789-C-A	5739748-C-A							**
5817973-GAGTGAAAAAGGAATAATAAAAATAGTT-G	5949932-GAGTGAAAAAGGAATAATAAAAATAGTT-G							**
5829844-C-A	5961803-C-A							**
5865803-G-T	5997762-G-T							**
5866104-G-T	5998063-G-T							**
5873657-T-C	6005616-T-C							**
5895318-A-G	6027277-A-G							**
5940325-C-A	6072284-C-A							**
5965652-G-A	6097611-G-A							**
5973174-T-C	6105133-T-C							**
5973180-T-C	6105139-T-C							**
5973181-G-A	6105140-G-A							**
5976328-C-A	6108287-C-A							**
6048847-C-A	6180806-C-A							**
6063436-G-GGTCT	6195395-G-GGTCT							**
6090919-C-A	6222878-C-A							**
6268618-T-TTCTG	6400577-T-TTCTG		IR3_Dst					**
6401744-C-T	6533703-C-T	BY60187						**
6467676-G-T	6599635-G-T							**
6630599-G-T	6762558-G-T							**
6807055-A-G	6939014-A-G							**
6808040-C-A	6939999-C-A							**
6878823-A-G	7010782-A-G							**
6929577-C-A	7061536-C-A							**
6977587-T-C	7109546-T-C							**
7038389-C-A	7170348-C-A							**
7135319-C-T	7267278-C-T							**
7158023-C-A	7289982-C-A							**
7184829-C-A	7316788-C-A							**
7200707-T-C	7332666-T-C							**
7229025-C-A	7360984-C-A							**
7237874-A-G	7369833-A-G							**
7255051-T-C	7387010-T-C							**
7255422-C-A	7387381-C-A							**
7462665-C-A	7594624-C-A		IR1_L					**
7656858-AC-A	7788817-AC-A							**
7869185-A-G	8001144-A-G							**
7996088-A-C	8128047-A-C							**
8135731-C-A	8267690-C-A							**
8290950-C-T	8422909-C-T							**
8661757-C-A	8793716-C-A							**
	9057263-GGAATGTCTTCACATCTATTCACA-G							**
	9123416-A-G							**
	9126683-G-T							**
8968278-C-A	9130669-C-A							**
9588028-G-GTGTT	9750419-G-GTGTT		IR3_Prx					**
9702967-G-GAA	9865358-G-GAA		IR3_Prx			11×A		**
9735693-T-A	9898084-T-A		IR3_Prx					**
9737871-A-AGACAG	9900262-A-AGACAG		IR3_Prx					**
9767447-C-A	9929838-C-A							**
9852697-T-C	10015088-T-C							**
9908677-T-A	10071068-T-A							**
9908683-T-C	10071074-T-C							**
9908685-C-G	10071076-C-G	F18036						**
9908689-C-A	10071080-C-A							**
9908691-A-T	10071082-A-T							**
9908700-A-C	10071091-A-C							**
10009411-C-A	10171802-C-A							**
10019754-AT-A	10182145-AT-A							**
10026254-T-C	10188645-T-C							**
10026728-C-A	10189119-C-A							**
10050775-A-G	10213166-A-G							**
	10624019-A-T							**
	10624028-T-G							**
	10624032-T-A							**
	10624035-C-T							**
	10624045-T-A							**
	10624059-C-A							**
	10624065-A-G							**
	10624080-AT-A							**
	10624091-C-T							**
	10652179-T-C							**
	10652184-T-G							**
	10652187-T-A							**
	10653698-C-A							**
	10686481-A-C							**
	10686486-C-A							**
	10686500-C-A							**
	10686500-CCACG-C							**
	10763133-T-A							**
	10774382-C-A							**
	10777042-C-A							**
	10777447-TC-T							**
	10785593-T-C	FT431102						**
	10795865-C-G							**
	10801796-C-A							**
	10807344-C-G							**
	10849246-C-A	FGC80240						**
	10856090-C-A							**
	10878169-CCACTCTATTCCACTCCACTCTATTCCACTCG-C							**
	10880436-C-A							**
	10898476-T-C							**
	10924386-C-A							**
	10926783-C-CGTCT							**
	10944662-T-C							**
	10968338-G-A							**
	10984059-A-G							**
	11013209-A-G							**
	11021972-G-T	FT85368						**
	11022033-C-A							**
13198073-T-G	11042397-T-G							**
13201584-G-A	11045908-G-A							**
13201591-A-C	11045915-A-C							**
13201596-A-C	11045920-A-C							**
13206473-C-A	11050797-C-A							**
13228954-G-A	11073278-G-A							**
13296574-C-T	11140898-C-T							**
13309541-C-A	11153865-C-A							**
13461434-T-TCAG	11305758-T-TCAG							**
13476066-G-T	11320390-G-T							**
13479692-C-T	11324016-C-T							**
13496299-G-T	11340623-G-T							**
13643549-C-T	11487873-C-T							**
13643572-T-C	11487896-T-C							**
	11653661-A-G		DYZ17					**
	11653664-A-C		DYZ17					**
	11663488-AT-A		DYZ17					**
	11677286-C-A		DYZ17					**
13811076-A-ATGCAT	11690370-A-ATGCAT		DYZ17					**
13855301-G-T	11734595-G-T		DYZ17					**
13855320-T-A	11734614-T-A		DYZ17					**
13855321-GGCAT-G	11734615-GGCAT-G		DYZ17					**
13855329-ATG-A	11734623-ATG-A		DYZ17					**
13855334-A-G	11734628-A-G		DYZ17					**
13946286-C-A	11825580-C-A							**
13947355-C-A	11826649-C-A							**
13970874-C-A	11850168-C-A							**
13973964-C-A	11853258-C-A							**
14022923-C-A	11902217-C-A							**
14047891-C-A	11927185-C-A							**
14067267-A-C	11946561-A-C							**
14227683-A-G	12106977-A-G							**
14299803-G-A	12179097-G-A							**
14299804-C-A	12179098-C-A							**
14348077-C-A	12227372-C-A							**
14352742-C-A	12232037-C-A							**
14368582-C-A	12247878-C-A							**
14383704-T-C	12263000-T-C							**
14423845-G-T	12303120-G-T							**
14427204-C-A	12306479-C-A							**
14430266-T-C	12309539-T-C							**
14501138-CT-C	12389343-CT-C							**
14559966-C-T	12448167-C-T							**
14562385-T-C	12450585-T-C							**
14567141-C-A	12455341-C-A							**
14721575-CA-C	12609643-CA-C							**
14766643-C-A	12654712-C-A							**
14797304-G-T	12685375-G-T							**
14879864-TACCATCTGGGTTCAAGTGATTCTCCTGC-T	12767934-TACCATCTGGGTTCAAGTGATTCTCCTGC-T							**
14887905-G-A	12775971-G-A	FT216501						**
14934440-C-A	12822505-C-A							**
15034675-C-A	12922763-C-A							**
15045580-C-A	12933670-C-A							**
15080797-C-A	12968887-C-A							**
15081131-A-G	12969221-A-G							**
15106830-C-A	12994917-C-A							**
15111458-C-A	12999545-C-A							**
15126880-C-A	13014967-C-A							**
15270929-G-T	13159018-G-T							**
15396789-C-A	13284909-C-A							**
15420270-G-T	13308390-G-T							**
15431873-C-A	13319993-C-A	FT296485						**
15541980-C-A	13430100-C-A							**
15671151-GTTTTT-G	13559271-GTTTTT-G					13×T		**
15671267-A-G	13559387-A-G							**
15680187-C-A	13568307-C-A							**
15912103-A-C	13800223-A-C							**
16028476-C-A	13916596-C-A							**
16050345-C-A	13938465-C-A							**
16052244-A-G	13940364-A-G							**
16116373-A-AG	14004493-A-AG		P8_Prx					**
16228085-G-T	14116205-G-T							**
16233442-A-C	14121562-A-C							**
16412477-C-A	14300597-C-A	Y27630 Z42044						**
16418544-C-A	14306664-C-A							**
16471649-TAGGATTTGGGTAGGTAATGAAAAATTAC-T	14359769-TAGGATTTGGGTAGGTAATGAAAAATTAC-T							**
16480060-C-A	14368180-C-A							**
16522343-C-A	14410463-C-A							**
16562708-G-A	14450828-G-A	FT160582						**
16607511-G-A	14495631-G-A							**
16676614-C-A	14564734-C-A							**
16677373-C-A	14565493-C-A							**
16816675-CT-C	14704795-CT-C							**
16876839-C-A	14764959-C-A							**
16926238-C-T	14814358-C-T							**
16971385-A-C	14859505-A-C							**
16988824-C-A	14876944-C-A							**
17029035-A-G	14917155-A-G							**
17065009-G-T	14953129-G-T							**
17092622-T-C	14980742-T-C							**
17097734-G-A	14985854-G-A							**
17130266-C-T	15018386-C-T							**
17177248-A-G	15065368-A-G							**
17183254-C-G	15071374-C-G							**
17220002-T-A	15108122-T-A							**
17270793-CTGCACCCACTGTCT-C	15158913-CTGCACCCACTGTCT-C							**
17285188-CA-C	15173308-CA-C							**
17462024-C-A	15350144-C-A							**
17551530-G-A	15439650-G-A	Y53403						**
17551535-T-A	15439655-T-A							**
17622662-T-C	15510782-T-C							**
17718467-C-A	15606587-C-A							**
17804487-G-A	15692607-G-A	Y136272						**
17859197-T-C	15747317-T-C							**
17947054-T-C	15835174-T-C							**
18009654-G-GCTGTC	15897774-G-GCTGTC		P7_Dst					**
18035975-C-A	15924095-C-A							**
18085532-C-T	15973652-C-T							**
18127674-T-C	16015794-T-C							**
18190862-T-C	16078982-T-C							**
18194403-T-C	16082523-T-C							**
18226820-A-G	16114940-A-G							**
18319612-A-G	16207732-A-G		P6_Prx					**
18319642-A-ATCTG	16207762-A-ATCTG		P6_Prx					**
18487913-A-AGACAG	16376033-A-AGACAG		P6_Dst					**
18488003-C-A	16376123-C-A		P6_Dst					**
18565048-C-A	16453168-C-A							**
18611791-GCAGAAGT-G	16499911-GCAGAAGT-G							**
18687490-T-C	16575610-T-C							**
18754872-A-G	16642992-A-G							**
18879928-C-A	16768048-C-A							**
18926845-C-T	16814965-C-T	FGC999						**
19061306-G-A	16949426-G-A							**
19065404-G-T	16953524-G-T							**
19071301-G-C	16959421-G-C							**
19129133-C-A	17017253-C-A							**
19184548-C-T	17072668-C-T							**
19318352-TG-T	17206472-TG-T							**
19346743-A-T	17234863-A-T							**
19346751-C-T	17234871-C-T							**
19346752-A-G	17234872-A-G							**
19390088-C-A	17278208-C-A							**
19403932-C-A	17292052-C-A							**
19418380-C-A	17306500-C-A							**
19435761-A-G	17323881-A-G							**
19465664-A-G	17353784-A-G							**
19622137-C-T	17510257-C-T		P5_Prx					**
19747805-TCTTTTTTAG-T	17635925-TCTTTTTTAG-T		P5_Prx					**
19895334-T-TATTTA	17783454-T-TATTTA		P5_Prx					**
20089188-C-CTCCTG	17977308-C-CTCCTG		P5_Dst					**
20089235-G-A	17977355-G-A		P5_Dst					**
20101167-TTATC-T	17989287-TTATC-T		P5_Dst					**
20323694-G-GCT	18161808-G-GCT		P5_Dst					**
20485072-T-TCTGTC	18323186-T-TCTGTC		P5_Dst					**
20512014-A-AAT	18350128-A-AAT		P5_Dst					**
20512021-G-A	18350135-G-A		P5_Dst					**
20512023-T-TC	18350137-T-TC		P5_Dst					**
20533211-T-C	18371325-T-C		P5_Dst					**
20613164-A-ACAG	18451278-A-ACAG		P4_Prx					**
20682223-T-TGAACC	18520337-T-TGAACC		P4_Prx					**
20902318-G-A	18740432-G-A		P4_Dst					**
21009210-A-ATT	18847324-A-ATT		P4_Dst					**
21022710-T-TTCTG	18860824-T-TTCTG		P4_Dst					**
21106902-CA-C	18945016-CA-C							**
21111713-C-T	18949827-C-T							**
21122956-A-C	18961070-A-C							**
21149199-C-A	18987313-C-A							**
21244188-G-T	19082302-G-T							**
21262679-A-T	19100793-A-T							**
21367600-C-A	19205714-C-A							**
21408895-C-A	19247009-C-A							**
21540941-GTGCCA-G	19379055-GTGCCA-G							**
21671768-C-A	19509882-C-A							**
21823228-C-A	19661342-C-A							**
22011587-C-T	19849701-C-T	FTA25000						**
22084864-C-A	19922978-C-A							**
22088799-C-T	19926913-C-T							**
22088800-A-G	19926914-A-G							**
22211317-A-T	20049431-A-T							**
22228096-C-T	20066210-C-T		DYZ19					**
22252090-G-T	20090204-G-T		DYZ19					**
22277852-A-T	20115966-A-T		DYZ19					**
22486965-G-A	20325079-G-A		DYZ19					**
22486970-T-A	20325084-T-A		DYZ19					**
22486974-T-G	20325088-T-G		DYZ19					**
22551280-T-G	20389394-T-G							**
22613964-T-A	20452078-T-A							**
22732782-C-A	20570896-C-A							**
22757572-G-A	20595686-G-A							**
22757582-C-A	20595696-C-A							**
22901883-G-A	20739997-G-A							**
22986284-C-A	20824398-C-A							**
23005346-C-A	20843460-C-A							**
23033561-C-A	20871675-C-A							**
23290754-T-A	21128868-T-A							**
23299715-A-T	21137829-A-T							**
23373169-C-A	21211283-C-A							**
23742520-C-A	21580634-C-A							**
23779643-C-T	21617757-C-T							**
23802047-C-A	21640161-C-A							**
23884141-A-AACAGG	21722255-A-AACAGG							**
	21781288-A-AAGACAG							**
24250893-C-CACAG	22104746-C-CACAG		P3_b1					**
24283987-A-AGACAG	22137840-A-AGACAG		P3_t1					**
24405910-G-T	22259763-G-T							**
24870544-T-TTCTG	22724397-T-TTCTG		IR1_R					**
25524729-G-C	23378582-G-C		P1_gr1					**
26055714-T-G	23909567-T-G		P1_Y1					**
26095089-ATCAGGTTTTTTAGTATGCTTATTATAATG-A	23948942-ATCAGGTTTTTTAGTATGCTTATTATAATG-A		P1_Y1					**
26095345-A-AGTCT	23949198-A-AGTCT		P1_Y1					**
26140302-T-TC	23994155-T-TC		P1_Y1					**
26188197-A-AGACAG	24042050-A-AGACAG		P1_Y1					**
26355413-T-C	24209266-T-C		P1_Y1					**
27497075-T-C	25350928-T-C		P1_Y2					**
27837813-C-CTCCCTG	25691666-C-CTCCCTG		P1_Y2			5×TCCT		**
27943893-T-TTCTG	25797746-T-TTCTG		P1_Y2					**
28003062-A-AACAG	25856915-A-AACAG		P1_Y2					**
28111552-C-A	25965405-C-A		P1_Y2					**
28229035-T-A	26082888-T-A		P1_b4					**
28429911-C-A	26283764-C-A		P1_gr2					**
28460795-T-A	26314648-T-A							**
28570482-T-C	26424335-T-C							**
28606074-G-A	26459927-G-A	FTB49812						**
28688289-C-A	26542142-C-A							**
28720272-T-C	26574125-T-C							**
28720281-AG-A	26574134-AG-A							**
28721378-G-T	26575231-G-T							**
28772221-T-C	26626074-T-C							**
28774388-C-A	26628241-C-A							**
28777857-C-T	26631710-C-T							**
	56823242-G-T							**
	56832894-A-AACAG							**
	56836804-C-A							**
	56848189-GGTC-G							**
22345494-G-C	20183608-G-C		DYZ19				***
27967355-TAG-T,TAT	25821208-TAG-T,TAT		P1_Y2			14×AG	***
22305374-T-C	20143488-T-C		DYZ19				***
22279295-A-G	20117409-A-G	A4020	DYZ19				***
22278052-T-C	20116166-T-C	FGC27631	DYZ19				***
22224697-C-A	20062811-C-A		DYZ19				***
22224702-A-G	20062816-A-G		DYZ19				***
22282237-A-C	20120351-A-C		DYZ19				***
22284169-T-C	20122283-T-C		DYZ19				***
22317605-T-G	20155719-T-G	BY25069	DYZ19				***
22422606-C-A	20260720-C-A		DYZ19				***
22317560-TA-T	20155674-TA-T		DYZ19				***
13489766-A-C,T	11334090-A-C,T							***
22309582-G-A	20147696-G-A		DYZ19				***
22265789-T-C	20103903-T-C		DYZ19				***
22278209-G-C	20116323-G-C		DYZ19				***
22278231-G-T	20116345-G-T		DYZ19				***
22281379-T-C	20119493-T-C		DYZ19				***
22281397-T-C	20119511-T-C	FGC22017	DYZ19				***
22265835-G-T	20103949-G-T		DYZ19				***
22257342-T-TG	20095456-T-TG		DYZ19				***
58977540-C-G	56831393-C-G						***
19646567-A-G	17534687-A-G		P5_Prx				***
22222179-T-G	20060293-T-G		DYZ19				***
22247690-A-G	20085804-A-G		DYZ19				***
22247691-G-A	20085805-G-A		DYZ19				***
22312049-T-C	20150163-T-C		DYZ19				***
22317524-GA-G	20155638-GA-G		DYZ19				***
22487029-C-A,G	20325143-C-A,G		DYZ19				***
24168032-T-G	22021885-T-G		P3_b1				***
24212598-C-G	22066451-C-G		P3_b1				***
25146563-C-A	23000416-C-A		g1				***
26574803-G-A	24428656-G-A		P1_g2				***
58980384-C-G	56834237-C-G						***
13801034-T-C,G	11680328-T-C,G		DYZ17				***
17441175-AATAT-A,AAT	15329295-AATAT-A,AAT					20×AT		***
16514304-ATG-A,ATGTG	14402424-ATG-A,ATGTG					18×TG		***
13447896-CGTTCAATTCCATTCCATTTA-C,CATTCCATTCCATTCCATTCC	11292220-CGTTCAATTCCATTCCATTTA-C,CATTCCATTCCATTCCATTCC							***
14354578-C-A	12233873-C-A							***
18567876-C-A	16455996-C-A							***
22170398-G-T	20008512-G-T							***
	10987824-CAT-C							***
	10804784-C-G							***
	10804791-A-G							***
21456015-C-A	19294129-C-A							***
22962455-G-T	20800569-G-T							***
	56828910-A-ATTCCT							***
19464135-G-T	17352255-G-T							***
9875224-C-A	10037615-C-A							***
17637638-AACACAC-A,AACAC	15525758-AACACAC-A,AACAC					21×AC		***
	10971295-C-A							***
	10956544-C-A							***
2825206-GTT-G	2957165-GTT-G					12×T		***
	10759950-C-A							***
14180704-C-A	12059998-C-A							***
18019832-CTTTTTTTT-C	15907952-CTTTTTTTT-C					22×T		***
	10757346-C-A,T							***
28745795-G-A	26599648-G-A							***
28745817-A-G	26599670-A-G							***
15542658-CAA-C,CA	13430778-CAA-C,CA					16×A		***
19508342-C-A	17396462-C-A							***
	56734829-G-A							***
8401083-CAA-C,CA	8533042-CAA-C,CA					14×A		***
13448839-C-T	11293163-C-T							***
15057194-C-A	12945286-C-A							***
	56834676-G-T							***
2730134-A-C	2862093-A-C							***
3536145-AT-A	3668104-AT-A							***
3620708-G-T	3752667-G-T							***
5609458-C-A	5741417-C-A							***
5621217-C-A	5753176-C-A							***
6012793-C-T	6144752-C-T							***
6428562-C-G	6560521-C-G							***
6925090-C-A	7057049-C-A							***
6996505-C-A	7128464-C-A							***
7285498-A-T	7417457-A-T							***
8806526-C-A	8938485-C-A							***
9875236-A-G	10037627-A-G							***
	10691028-C-A							***
	10754936-C-CCATTT							***
	10761817-T-A							***
	10805588-G-T							***
	10899925-G-T							***
	10911833-C-T							***
	10992782-C-A							***
	11017796-C-A							***
13291091-C-A	11135415-C-A							***
13489069-A-C,G	11333393-A-C,G							***
	11659200-C-A		DYZ17					***
14418109-C-A	12297406-C-A							***
15439991-C-A	13328111-C-A							***
16692115-ACC-A,AC	14580235-ACC-A,AC							***
17951299-ATTTTTTTT-A,ATTTT	15839419-ATTTTTTTT-A,ATTTT					25×T		***
17951443-ATCTCTC-A,ATC	15839563-ATCTCTC-A,ATC					12×TC		***
18838721-T-A	16726841-T-A							***
21912160-C-A	19750274-C-A							***
21950211-A-G	19788325-A-G							***
22486991-T-C	20325105-T-C		DYZ19					***
23006999-A-T	20845113-A-T							***
28815140-A-G	26668993-A-G							***
	56848686-C-A							***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Smith

Tree Position

Unique Mutations