Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > FGC11134 > FGC12055 > ZZ44 > ZZ46 > FGC11293 > BY64053 > BY116376

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
208003
BigY2
208003
Manual
Edits
24365177-A-T 22219030-A-T BY38031 8×AGAGATA*
13457347-T-TATTCC 11301671-T-TATTCC 10×ATTCC*****
13472212-C-A 11316536-C-A **
22439801-A-G 20277915-A-G DYZ19 **
7361976-G-T 7493935-G-T **
19183496-A-C 17071616-A-C **
9654771-C-A 9817162-C-A F1587 IR3_Prx **
23289783-C-T 21127897-C-T Y25628 **
28622721-C-T 26476574-C-T PF4791 CTS12578 ****
58994007-C-G 56847860-C-G **
13488869-C-G 11333193-C-G **
13488904-G-A 11333228-G-A **
7188420-C-A 7320379-C-A ****
16008224-C-A 13896344-C-A PF4147 ****
22199347-C-A 20037461-C-A ****
22362442-A-C 20200556-A-C DYZ19 **
17633793-C-A 15521913-C-A **
13472223-C-T 11316547-C-T **
4982547-G-T 5114506-G-T **
13472222-C-T 11316546-C-T **
10764565-C-CG **
2974446-C-A 3106405-C-A **
14986108-C-A 12874176-C-A **
16467592-C-A 14355712-C-A **
56829999-A-ACTTTT **
10978934-C-A **
21207044-C-A 19045158-C-A **
13254002-GTT-G 11098326-GTT-G 17×T**
5190004-GAA-G 5321963-GAA-G 16×A**
16648148-A-T 14536268-A-T **
13280072-C-A 11124396-C-A **
10985251-C-T **
22113186-T-A 19951300-T-A **
4133990-C-A 4265949-C-A **
8674154-C-A 8806113-C-A **
7613833-G-A 7745792-G-A 31×A**
16172104-C-A 14060224-C-A **
22920605-CTTT-C 20758719-CTTT-C 25×T**
9110902-G-T **
4470065-C-A 4602024-C-A **
24595356-CTT-C 22449209-CTT-C P3_t2 26×T**
16480035-A-C 14368155-A-C **
20376539-C-A 18214653-C-A P5_Dst **
19391189-A-T 17279309-A-T **
10776499-T-TTGAAC **
2681076-C-A 2813035-C-A **
10916335-A-G **
10916346-G-A **
10666946-T-A **
10666930-A-C **
10801661-C-A **
21084508-G-T 18922622-G-T **
14550666-C-A 12438867-C-A **
18794959-C-A 16683079-C-A **
11001486-C-A **
10835589-T-C **
9508503-C-A 9670894-C-A **
10778978-T-C **
6642939-G-T 6774898-G-T **
10764153-G-A FT299743 **
10795809-G-T **
10888641-T-TCCTTG **
16019063-G-T 13907183-G-T **
14776986-A-G 12665055-A-G **
28758080-C-A 26611933-C-A **
10754930-T-G **
11031543-C-G **
13885569-C-A 11764863-C-A **
8276318-C-A 8408277-C-A **
7188399-C-A 7320358-C-A **
19496313-C-A 17384433-C-A **
6479158-C-A 6611117-C-A **
10937424-G-T **
19517746-C-A 17405866-C-A **
14292652-G-T 12171946-G-T **
14776923-CAAA-C 12664992-CAAA-C 15×A**
17934028-C-A 15822148-C-A **
7363239-C-A 7495198-C-A **
16572694-C-A 14460814-C-A **
3116079-C-A 3248038-C-A **
7160586-CTTT-C 7292545-CTTT-C 15×T**
26463150-G-T 24317003-G-T P1_Y1 **
10935466-C-A **
14502023-G-T 12390228-G-T **
27966907-GTATA-G 25820760-GTATA-G P1_Y2 10×TA**
56858700-C-A **
56832120-C-A **
14227631-C-A 12106925-C-A **
25995611-T-TA 23849464-T-TA P1_Y1 **
19138716-C-A 17026836-C-A **
10754983-A-C **
9945753-C-A 10108144-C-A **
9852658-C-A 10015049-C-A **
15161122-C-A 13049208-C-A **
14776977-T-A 12665046-T-A **
7362005-C-T 7493964-C-T **
9436837-C-A 9599228-C-A Y133125 **
18480335-A-T 16368455-A-T P6_Dst **
10652328-T-A **
10652335-T-C **
10652337-C-G **
17387424-C-A 15275544-C-A **
19168815-C-A 17056935-C-A **
19883252-G-T 17771372-G-T P5_Prx **
18263809-C-A 16151929-C-A **
14610734-C-A 12498936-C-A **
17730416-C-A 15618536-C-A **
14486033-T-C 12365302-T-C **
16462652-G-T 14350772-G-T **
18036627-G-T 15924747-G-T BY119357 **
23952575-T-G 21806428-T-G **
21367265-C-A 19205379-C-A **
21388632-C-A 19226746-C-A **
24509423-C-A 22363276-C-A **
25975061-G-T 23828914-G-T P1_Y1 **
11001503-T-G **
3544614-C-A 3676573-C-A **
17306349-C-A 15194469-C-A **
6459851-C-A 6591810-C-A **
22662446-G-T 20500560-G-T **
13234656-C-A 11078980-C-A **
17224240-C-A 15112360-C-A **
14184615-C-A 12063909-C-A **
18930550-C-A 16818670-C-A **
2684531-G-T 2816490-G-T **
2684602-T-G 2816561-T-G **
2853355-C-A 2985314-C-A **
2948219-C-A 3080178-C-A **
3064480-C-A 3196439-C-A **
3082866-C-A 3214825-C-A **
3093027-G-T 3224986-G-T **
3116138-A-G 3248097-A-G **
3122524-G-T 3254483-G-T **
3246330-A-T 3378289-A-T **
3250728-T-C 3382687-T-C **
3272958-C-A 3404917-C-A **
3274880-G-T 3406839-G-T **
3329300-C-A 3461259-C-A **
3337657-C-T 3469616-C-T **
3343807-A-C 3475766-A-C **
3350561-T-A 3482520-T-A **
3350624-G-C 3482583-G-C **
3407847-G-A 3539806-G-A **
3436410-CCTT-C 3568369-CCTT-C **
3436420-C-G 3568379-C-G FT426027 **
3467265-T-G 3599224-T-G **
3501196-A-T 3633155-A-T **
3536343-T-C 3668302-T-C **
3546754-C-G 3678713-C-G **
3555830-G-T 3687789-G-T **
3669263-C-A 3801222-C-A **
3759275-C-A 3891234-C-A **
3852330-C-A 3984289-C-A **
3866111-TA-T 3998070-TA-T **
3955463-G-A 4087422-G-A **
3957692-T-C 4089651-T-C **
4046482-T-G 4178441-T-G **
4178012-G-T 4309971-G-T **
4178606-A-G 4310565-A-G **
4179530-A-T 4311489-A-T **
4201137-G-T 4333096-G-T **
4209087-A-C 4341046-A-C **
4241748-C-A 4373707-C-A **
4249182-C-A 4381141-C-A **
4349346-G-T 4481305-G-T **
4350518-G-T 4482477-G-T **
4357545-C-A 4489504-C-A **
4389548-A-C 4521507-A-C **
4439372-C-A 4571331-C-A **
4516285-T-C 4648244-T-C **
4535695-G-T 4667654-G-T **
4542632-G-T 4674591-G-T **
4597222-C-A 4729181-C-A **
4603203-C-T 4735162-C-T FT230478 **
4605131-T-C 4737090-T-C **
4611909-G-T 4743868-G-T **
4688291-C-A 4820250-C-A **
4700083-A-C 4832042-A-C **
4781126-C-A 4913085-C-A **
4862737-A-T 4994696-A-T **
4882640-C-A 5014599-C-A **
4882755-C-A 5014714-C-A **
4918434-A-G 5050393-A-G **
4930360-G-T 5062319-G-T **
4960515-A-G 5092474-A-G **
4961765-T-C 5093724-T-C **
5022030-C-A 5153989-C-A **
5050373-C-A 5182332-C-A **
5080612-G-T 5212571-G-T **
5101869-G-T 5233828-G-T **
5126153-C-A 5258112-C-A **
5127136-G-T 5259095-G-T **
5185192-A-G 5317151-A-G **
5185202-C-T 5317161-C-T **
5186456-G-T 5318415-G-T **
5191263-A-G 5323222-A-G **
5199680-C-T 5331639-C-T **
5224414-G-A 5356373-G-A **
5242740-C-A 5374699-C-A **
5242899-G-T 5374858-G-T **
5247343-C-A 5379302-C-A **
5247345-C-A 5379304-C-A **
5274296-T-G 5406255-T-G **
5305652-T-G 5437611-T-G **
5305707-T-G 5437666-T-G **
5316887-C-G 5448846-C-G **
5316923-A-G 5448882-A-G **
5375721-G-T 5507680-G-T **
5395428-T-G 5527387-T-G **
5448668-C-A 5580627-C-A **
5483838-C-A 5615797-C-A **
5524636-A-G 5656595-A-G **
5555196-C-A 5687155-C-A **
5625919-C-A 5757878-C-A **
5625937-C-A 5757896-C-A **
5645015-A-C 5776974-A-C **
5645171-C-A 5777130-C-A **
5721024-C-A 5852983-C-A **
5829533-T-A 5961492-T-A **
5841995-C-A 5973954-C-A **
5924424-A-C 6056383-A-C **
5927292-G-T 6059251-G-T **
5976351-T-C 6108310-T-C **
5976360-G-C 6108319-G-C **
6250255-T-C 6382214-T-C IR3_Dst **
6305418-A-G 6437377-A-G IR3_Dst **
6305437-G-T 6437396-G-T IR3_Dst **
6305477-G-T 6437436-G-T IR3_Dst **
6437511-G-T 6569470-G-T **
6437747-C-A 6569706-C-A **
6518286-C-A 6650245-C-A **
6582326-C-A 6714285-C-A **
6591529-G-T 6723488-G-T **
6663840-T-G 6795799-T-G **
6663841-G-A 6795800-G-A **
6663863-A-G 6795822-A-G **
6663879-G-T 6795838-G-T **
6663883-C-G 6795842-C-G **
6663884-T-C 6795843-T-C **
6767784-G-GA 6899743-G-GA 9×A**
6767863-A-G 6899822-A-G **
6767864-G-A 6899823-G-A **
6786924-T-C 6918883-T-C **
6790123-C-A 6922082-C-A **
6791702-C-A 6923661-C-A **
6825420-C-G 6957379-C-G **
6833401-T-C 6965360-T-C **
6891983-C-A 7023942-C-A **
6915917-C-A 7047876-C-A **
6981355-C-A 7113314-C-A **
6981384-C-A 7113343-C-A **
6981388-G-A 7113347-G-A **
7042727-C-A 7174686-C-A **
7081603-C-T 7213562-C-T **
7081615-A-G 7213574-A-G **
7082675-T-A 7214634-T-A **
7095054-C-A 7227013-C-A **
7103406-C-A 7235365-C-A **
7132149-G-T 7264108-G-T **
7142535-C-A 7274494-C-A **
7160558-T-G 7292517-T-G **
7163181-T-G 7295140-T-G **
7172455-T-C 7304414-T-C **
7182264-A-T 7314223-A-T **
7182874-C-A 7314833-C-A **
7182914-C-A 7314873-C-A **
7185042-C-A 7317001-C-A **
7199549-C-G 7331508-C-G **
7208119-CT-C 7340078-CT-C **
7208509-A-G 7340468-A-G **
7225457-C-A 7357416-C-A **
7228376-G-A 7360335-G-A **
7240278-G-T 7372237-G-T **
7248107-C-A 7380066-C-A **
7275083-C-A 7407042-C-A **
7299753-A-G 7431712-A-G **
7303921-T-A 7435880-T-A **
7304343-G-C 7436302-G-C **
7304344-C-A 7436303-C-A **
7304751-T-C 7436710-T-C **
7335654-C-A 7467613-C-A **
7340404-G-T 7472363-G-T **
7361981-G-T 7493940-G-T **
7361997-G-T 7493956-G-T **
7362635-C-G 7494594-C-G **
7362642-G-T 7494601-G-T **
7371117-T-G 7503076-T-G **
7409423-A-AT 7541382-A-AT **
7428116-C-A 7560075-C-A **
7537710-G-C 7669669-G-C **
7567971-G-A 7699930-G-A **
7608469-C-A 7740428-C-A **
7621229-C-A 7753188-C-A **
7629886-G-T 7761845-G-T **
7670783-A-C 7802742-A-C **
7829462-G-A 7961421-G-A **
7867012-C-A 7998971-C-A **
7969235-A-C 8101194-A-C **
7969479-T-C 8101438-T-C **
7986024-C-T 8117983-C-T **
7991332-C-T 8123291-C-T **
7996739-C-A 8128698-C-A **
8110725-G-A 8242684-G-A **
8276355-G-A 8408314-G-A **
8288773-C-A 8420732-C-A **
8379389-T-C 8511348-T-C **
8556214-A-G 8688173-A-G **
8556237-G-T 8688196-G-T **
8556254-G-T 8688213-G-T **
8644323-G-T 8776282-G-T **
8661147-G-C 8793106-G-C **
8668310-C-A 8800269-C-A **
8694090-T-G 8826049-T-G **
8720332-C-A 8852291-C-A **
8822362-C-T 8954321-C-T **
9125508-G-T **
8980649-T-A 9143040-T-A **
9013075-T-G 9175466-T-G **
9194549-C-A 9356940-C-A **
9383702-G-T 9546093-G-T **
9436681-C-A 9599072-C-A **
9642478-G-T 9804869-G-T IR3_Prx **
9642519-G-T 9804910-G-T IR3_Prx **
9761109-C-A 9923500-C-A **
9830584-C-A 9992975-C-A **
9885292-C-A 10047683-C-A **
9925304-C-A 10087695-C-A **
9927514-G-T 10089905-G-T **
9927519-T-G 10089910-T-G **
9943547-A-C 10105938-A-C **
9953324-T-G 10115715-T-G **
9980588-T-G 10142979-T-G **
9983771-C-A 10146162-C-A **
9991225-T-A 10153616-T-A **
10015097-T-C 10177488-T-C **
10024907-T-G 10187298-T-G **
10026846-A-C 10189237-A-C **
10031821-C-A 10194212-C-A **
10034177-C-A 10196568-C-A **
10651875-C-T **
10663601-C-A **
10669141-G-C **
10685333-A-C **
10685368-G-T **
10754925-T-A **
10764154-T-C **
10764186-C-T **
10774800-G-T **
10777950-C-G **
10778075-TCTCTCATAGCATTTCAC-T **
10778932-T-A **
10778940-T-G **
10778947-A-T **
10778952-A-T **
10778967-A-G **
10778969-T-G **
10778973-T-C **
10778975-C-A **
10778981-T-A **
10787348-T-C **
10795837-T-TTTCCATTCCA **
10803826-T-G **
10826468-T-C **
10826839-C-A **
10835585-T-A **
10855571-A-T **
10858562-G-T **
10869965-CCCATTCCATTCCATTCCATTCCATTCCATT-C **
10870884-T-G **
10873603-C-A **
10880484-T-G **
10885838-T-C FT435530 **
10888590-T-C **
10888593-T-A **
10888598-T-C **
10889370-C-A **
10896140-C-G **
10896273-T-C **
10906849-C-A **
10906890-C-A **
10913222-C-A **
10913238-C-A **
10913254-C-G **
10916304-G-A **
10916336-A-C **
10925429-C-A **
10926599-G-C **
10956719-C-A **
10963494-C-A **
10975709-T-C **
10975716-T-C **
10975724-G-T **
10975728-A-C **
10975731-G-C **
10981229-GTTCCA-G **
10991233-TCCG-T **
10991237-T-TTTCTAAA **
10994302-C-A **
10995545-T-A **
11001487-C-A **
11035161-C-A **
13205303-G-C 11049627-G-C **
13215523-C-A 11059847-C-A **
13217910-G-T 11062234-G-T **
13217919-T-G 11062243-T-G **
13228972-C-T 11073296-C-T **
13234677-A-C 11079001-A-C **
13234728-G-T 11079052-G-T **
13235034-A-T 11079358-A-T **
13235046-T-A 11079370-T-A **
13295854-T-G 11140178-T-G **
13295883-T-G 11140207-T-G **
13297053-A-C 11141377-A-C **
13311864-C-A 11156188-C-A **
13315741-C-A 11160065-C-A **
13320281-T-G 11164605-T-G **
13322117-A-G 11166441-A-G **
13324756-C-G 11169080-C-G **
13329538-C-A 11173862-C-A **
13329549-A-C 11173873-A-C **
13335806-A-C 11180130-A-C **
13360968-C-A 11205292-C-A **
13402671-C-T 11246995-C-T **
13402672-A-G 11246996-A-G **
13402676-T-C 11247000-T-C **
13402680-C-T 11247004-C-T **
13402684-C-A 11247008-C-A **
13460142-C-A 11304466-C-A **
13461019-A-C 11305343-A-C **
13462330-C-A 11306654-C-A **
13468889-A-C 11313213-A-C **
13484554-A-T 11328878-A-T **
13484824-C-A 11329148-C-A **
13507004-G-T 11351328-G-T **
13529872-A-G 11374196-A-G **
13542294-T-G 11386618-T-G **
13640802-A-T 11485126-A-T **
11643703-G-C **
11649778-G-T **
11653136-G-A **
11653222-G-C **
11654917-C-A **
11659066-G-T **
11660194-A-G **
11675760-T-C **
11677670-A-C **
13856547-C-A 11735841-C-A **
13890877-T-G 11770171-T-G **
13909850-C-A 11789144-C-A **
13929257-T-G 11808551-T-G **
13932516-C-A 11811810-C-A **
13932596-G-A 11811890-G-A **
13934343-C-A 11813637-C-A **
13935118-A-T 11814412-A-T **
13936285-A-T 11815579-A-T **
13937368-C-A 11816662-C-A **
13956511-C-A 11835805-C-A **
13963433-G-T 11842727-G-T **
13968498-C-A 11847792-C-A **
13968569-A-C 11847863-A-C **
14006626-C-A 11885920-C-A **
14009601-T-G 11888895-T-G **
14050595-T-G 11929889-T-G **
14051979-T-G 11931273-T-G **
14070145-G-T 11949439-G-T **
14109352-G-A 11988646-G-A **
14181542-C-A 12060836-C-A **
14181554-A-C 12060848-A-C **
14191851-C-A 12071145-C-A **
14192947-A-G 12072241-A-G **
14198220-C-A 12077514-C-A **
14225341-C-A 12104635-C-A **
14229690-C-A 12108984-C-A **
14240308-C-A 12119602-C-A **
14241855-G-T 12121149-G-T **
14251761-G-T 12131055-G-T **
14251827-G-T 12131121-G-T **
14255124-C-T 12134418-C-T **
14263234-T-A 12142528-T-A **
14269958-C-A 12149252-C-A **
14284044-C-A 12163338-C-A **
14297944-G-C 12177238-G-C **
14308154-C-A 12187448-C-A **
14392761-GTCTCTC-G 12272057-GTCTCTC-G **
14444942-A-C 12324215-A-C **
14444975-T-C 12324248-T-C **
14445477-G-T 12324750-G-T **
14450434-A-T 12329707-A-T **
14461186-A-C 12340459-A-C **
14461234-C-A 12340507-C-A **
14468288-G-A 12347557-G-A **
14471694-A-C 12350963-A-C **
14512509-C-A 12400714-C-A **
14530917-T-G 12419118-T-G **
14537755-C-A 12425956-C-A **
14552716-C-A 12440917-C-A **
14553251-C-A 12441452-C-A FT111313 **
14554273-C-A 12442474-C-A **
14559143-G-T 12447344-G-T **
14568849-C-A 12457049-C-A **
14570112-A-G 12458312-A-G **
14570721-C-A 12458921-C-A **
14582403-A-G 12470603-A-G **
14585746-A-C 12473946-A-C **
14610726-A-G 12498928-A-G **
14691545-A-G 12579611-A-G **
14698358-C-A 12586424-C-A **
14700989-G-T 12589055-G-T **
14704328-T-C 12592394-T-C **
14776990-AG-A 12665059-AG-A **
14777005-G-T 12665074-G-T **
14802058-C-A 12690129-C-A **
14823553-CT-C 12711620-CT-C **
14844428-A-G 12732494-A-G **
14846899-G-A 12734965-G-A **
14931833-C-A 12819898-C-A **
14938256-C-A 12826331-C-A **
14986165-A-C 12874233-A-C **
15044220-A-G 12932310-A-G **
15119388-G-A 13007475-G-A **
15119827-C-A 13007914-C-A **
15178290-A-C 13066376-A-C **
15218891-T-C 13106977-T-C **
15239602-AT-A 13127688-AT-A **
15252773-C-A 13140859-C-A **
15252785-G-T 13140871-G-T **
15260726-C-A 13148810-C-A **
15281866-T-C 13169965-T-C **
15288042-T-A 13176141-T-A **
15305793-C-A 13193892-C-A **
15321321-G-T 13209439-G-T **
15400254-G-C 13288374-G-C **
15401227-C-A 13289347-C-A **
15424660-CA-C 13312780-CA-C **
15430680-A-C 13318800-A-C **
15504203-G-A 13392323-G-A **
15536185-C-A 13424305-C-A **
15600076-T-G 13488196-T-G **
15644158-G-T 13532278-G-T **
15682856-C-A 13570976-C-A **
15682932-C-A 13571052-C-A **
15685503-C-G 13573623-C-G **
15688545-C-A 13576665-C-A **
15732992-C-A 13621112-C-A **
15742206-G-T 13630326-G-T **
15770356-A-C 13658476-A-C **
15788246-C-A 13676366-C-A **
15835165-A-C 13723285-A-C **
15921340-G-T 13809460-G-T **
15943044-A-C 13831164-A-C **
15946554-C-A 13834674-C-A **
15963751-C-G 13851871-C-G **
15995238-C-A 13883358-C-A **
16022648-G-T 13910768-G-T **
16032417-A-G 13920537-A-G **
16039182-T-G 13927302-T-G **
16050368-T-C 13938488-T-C **
16075877-A-C 13963997-A-C **
16092419-C-A 13980539-C-A **
16179766-C-A 14067886-C-A **
16184107-T-C 14072227-T-C **
16232454-A-G 14120574-A-G **
16312388-G-A 14200508-G-A **
16319929-A-G 14208049-A-G **
16355537-C-A 14243657-C-A **
16437455-T-A 14325575-T-A **
16462629-G-T 14350749-G-T **
16462855-C-A 14350975-C-A **
16467307-A-G 14355427-A-G **
16467400-G-T 14355520-G-T **
16467570-C-A 14355690-C-A **
16501307-G-T 14389427-G-T **
16505063-C-A 14393183-C-A **
16506937-C-A 14395057-C-A **
16531061-G-A 14419181-G-A **
16539629-A-C 14427749-A-C **
16559864-T-G 14447984-T-G **
16588386-C-A 14476506-C-A **
16652911-C-T 14541031-C-T **
16676071-C-A 14564191-C-A **
16707796-C-A 14595916-C-A **
16710448-T-G 14598568-T-G **
16738147-C-A 14626267-C-A **
16739461-C-A 14627581-C-A **
16777684-A-C 14665804-A-C **
16825029-C-A 14713149-C-A **
16868734-A-C 14756854-A-C **
16904587-C-A 14792707-C-A **
16938367-A-G 14826487-A-G **
16938368-C-A 14826488-C-A **
16938372-C-G 14826492-C-G **
16938417-T-G 14826537-T-G **
16938445-T-G 14826565-T-G **
16938572-G-T 14826692-G-T **
16941646-C-A 14829766-C-A **
16942156-C-A 14830276-C-A **
17006614-A-G 14894734-A-G **
17034900-G-T 14923020-G-T **
17085776-T-A 14973896-T-A **
17170332-G-T 15058452-G-T **
17175438-T-C 15063558-T-C **
17175475-G-T 15063595-G-T **
17177178-A-G 15065298-A-G **
17203358-A-G 15091478-A-G FT390499 **
17211526-G-T 15099646-G-T **
17211669-A-G 15099789-A-G **
17215984-C-A 15104104-C-A **
17297401-C-A 15185521-C-A **
17370805-T-C 15258925-T-C FT94667 **
17440347-T-C 15328467-T-C **
17474794-C-A 15362914-C-A **
17481117-C-A 15369237-C-A FTA24163 **
17486276-C-A 15374396-C-A **
17551660-T-G 15439780-T-G **
17575505-T-C 15463625-T-C **
17597981-G-T 15486101-G-T **
17628823-G-T 15516943-G-T **
17637856-G-A 15525976-G-A **
17788829-G-T 15676949-G-T **
17798953-G-T 15687073-G-T **
17882747-C-A 15770867-C-A **
18059083-A-C 15947203-A-C **
18059095-T-C 15947215-T-C **
18094239-G-T 15982359-G-T **
18143806-A-G 16031926-A-G **
18154383-C-G 16042503-C-G **
18192025-G-C 16080145-G-C **
18192027-G-A 16080147-G-A **
18194352-A-G 16082472-A-G **
18230477-G-T 16118597-G-T **
18231241-G-T 16119361-G-T **
18340668-G-T 16228788-G-T P6_Prx **
18382102-C-A 16270222-C-A P6_Gap **
18465595-C-G 16353715-C-G P6_Dst **
18465609-C-A 16353729-C-A P6_Dst **
18465613-C-A 16353733-C-A P6_Dst **
18524603-T-C 16412723-T-C P6_Dst **
18540142-T-C 16428262-T-C **
18616037-T-G 16504157-T-G **
18687557-C-A 16575677-C-A **
18703809-G-T 16591929-G-T **
18707237-G-T 16595357-G-T **
18730572-C-G 16618692-C-G **
18730631-A-T 16618751-A-T **
18748965-C-A 16637085-C-A **
18817865-C-T 16705985-C-T **
18817905-A-C 16706025-A-C **
18825455-C-T 16713575-C-T **
18902891-G-T 16791011-G-T **
18929023-C-A 16817143-C-A **
18933620-C-A 16821740-C-A **
19007657-C-A 16895777-C-A **
19052198-C-A 16940318-C-A **
19071025-A-G 16959145-A-G **
19097259-T-C 16985379-T-C **
19097260-A-C 16985380-A-C **
19122076-C-G 17010196-C-G **
19145537-T-C 17033657-T-C **
19206740-GTAAAAAA-G 17094860-GTAAAAAA-G **
19246730-A-C 17134850-A-C **
19246813-C-T 17134933-C-T **
19340378-C-T 17228498-C-T **
19449073-C-A 17337193-C-A **
19532452-C-A 17420572-C-A **
19559009-T-C 17447129-T-C **
19563137-T-A 17451257-T-A **
19619088-C-A 17507208-C-A P5_Prx **
19686221-C-CTTTTT 17574341-C-CTTTTT P5_Prx 16×T**
19686251-A-C 17574371-A-C P5_Prx **
19686255-TG-T 17574375-TG-T P5_Prx **
19740669-T-C 17628789-T-C P5_Prx **
19883230-G-T 17771350-G-T P5_Prx **
19883238-G-T 17771358-G-T P5_Prx **
19883267-T-G 17771387-T-G P5_Prx **
20021496-T-TTATATA 17909616-T-TTATATA P5_Prx 15×TA**
20332106-G-A 18170220-G-A P5_Dst **
20630614-A-G 18468728-A-G P4_Prx **
20794366-A-T 18632480-A-T P4_Prx **
20794391-A-G 18632505-A-G P4_Prx **
20794448-T-TGA 18632562-T-TGA P4_Prx **
20998441-C-A 18836555-C-A P4_Dst **
21139436-A-T 18977550-A-T **
21141062-C-T 18979176-C-T **
21162472-C-A 19000586-C-A FGC60431 **
21167438-C-A 19005552-C-A **
21240647-G-T 19078761-G-T **
21244195-G-T 19082309-G-T **
21248645-C-A 19086759-C-A **
21262695-C-A 19100809-C-A **
21280989-G-A 19119103-G-A **
21409581-A-G 19247695-A-G **
21427748-T-G 19265862-T-G **
21515672-C-A 19353786-C-A **
21796656-G-T 19634770-G-T **
21831774-G-T 19669888-G-T **
21911014-C-A 19749128-C-A **
21911033-C-A 19749147-C-A **
21911052-A-C 19749166-A-C **
21946397-A-G 19784511-A-G **
21980000-T-C 19818114-T-C **
22023257-G-T 19861371-G-T **
22048531-A-G 19886645-A-G **
22077153-G-C 19915267-G-C **
22078298-G-T 19916412-G-T **
22171167-G-T 20009281-G-T **
22175945-A-G 20014059-A-G **
22176067-G-T 20014181-G-T **
22188736-G-C 20026850-G-C **
22199373-C-T 20037487-C-T **
22204395-G-T 20042509-G-T **
22357705-C-A 20195819-C-A DYZ19 **
22357717-C-A 20195831-C-A DYZ19 **
22447613-G-T 20285727-G-T DYZ19 **
22506936-T-G 20345050-T-G DYZ19 **
22530112-G-A 20368226-G-A **
22536543-A-C 20374657-A-C **
22536545-T-C 20374659-T-C **
22661997-C-A 20500111-C-A **
22662445-T-G 20500559-T-G **
22808726-C-A 20646840-C-A **
22851419-C-A 20689533-C-A **
22887108-A-T 20725222-A-T **
22963453-A-G 20801567-A-G **
23007814-C-T 20845928-C-T **
23009184-C-G 20847298-C-G **
23185317-G-T 21023431-G-T **
23188214-C-A 21026328-C-A YFS153952 **
23277226-T-A 21115340-T-A **
23439030-G-T 21277144-G-T **
23459937-G-C 21298051-G-C **
23465785-G-T 21303899-G-T **
23476243-T-C 21314357-T-C **
23476258-T-C 21314372-T-C **
23476270-T-C 21314384-T-C **
23505105-G-C 21343219-G-C **
23603341-C-A 21441455-C-A **
23952509-G-T 21806362-G-T **
24212477-A-C 22066330-A-C P3_b1 **
24259201-C-A 22113054-C-A P3_b1 **
24259234-G-T 22113087-G-T P3_b1 **
24259246-C-A 22113099-C-A P3_b1 **
24389805-C-A 22243658-C-A **
24389921-G-TTTT 22243774-G-TTTT **
24404324-G-T 22258177-G-T **
24406306-A-G 22260159-A-G **
24466252-C-A 22320105-C-A **
24535238-C-T 22389091-C-T P3_t2 **
24564547-A-C 22418400-A-C P3_t2 **
25975043-G-T 23828896-G-T P1_Y1 **
25975071-G-T 23828924-G-T P1_Y1 **
26055548-G-C 23909401-G-C P1_Y1 **
26234888-GA-G 24088741-GA-G P1_Y1 **
26234891-A-T 24088744-A-T P1_Y1 **
26234893-G-GT 24088746-G-GT P1_Y1 **
26484719-G-T 24338572-G-T P1_Y1 **
26484738-A-G 24338591-A-G P1_Y1 **
26484768-T-TG 24338621-T-TG P1_Y1 **
27499385-T-TA 25353238-T-TA P1_Y2 **
27829229-G-T 25683082-G-T P1_Y2 **
27971706-T-G 25825559-T-G P1_Y2 **
28462158-A-C 26316011-A-C **
28475096-C-A 26328949-C-A **
28481333-A-C 26335186-A-C **
28528640-G-T 26382493-G-T **
28534341-A-C 26388194-A-C **
28591237-G-A 26445090-G-A **
28597514-C-A 26451367-C-A **
28599975-C-A 26453828-C-A **
28600503-G-T 26454356-G-T **
28600520-G-T 26454373-G-T **
28608436-T-G 26462289-T-G **
28608441-T-G 26462294-T-G **
28619323-T-A 26473176-T-A **
28619375-C-A 26473228-C-A **
28638709-C-A 26492562-C-A **
28656926-G-C 26510779-G-C **
28656969-G-T 26510822-G-T **
28676565-G-T 26530418-G-T **
28683572-C-A 26537425-C-A **
28708289-A-G 26562142-A-G **
28719200-C-A 26573053-C-A **
28735939-C-A 26589792-C-A **
28735971-T-G 26589824-T-G **
28754892-C-A 26608745-C-A **
28755978-C-A 26609831-C-A **
28756189-C-A 26610042-C-A **
28758063-C-A 26611916-C-A **
28771459-A-C 26625312-A-C **
28773748-C-T 26627601-C-T **
28798698-G-T 26652551-G-T **
28800928-C-A 26654781-C-A **
56763500-A-T **
56828393-C-A **
56833589-A-C **
56833610-A-G **
56833650-T-C **
56846059-T-G **
56858687-C-A **
58972950-G-A,T 56826803-G-A,T ***
18512434-CTG-C 16400554-CTG-C P6_Dst 17×TG***
58976132-C-T 56829985-C-T ***
25176165-G-A 23030018-G-A g1 ***
17396230-CT-C 15284350-CT-C 11×T***
24207919-C-G 22061772-C-G P3_b1 ***
13860224-C-A 11739518-C-A ***
22260638-C-T 20098752-C-T DYZ19 ***
22275489-C-A 20113603-C-A DYZ19 ***
22312010-C-G 20150124-C-G DYZ19 ***
24661498-G-A 22515351-G-A P3_b2 ***
24770480-C-T 22624333-C-T P3_b2 ***
25015522-A-G 22869375-A-G g1 ***
25017699-C-A 22871552-C-A g1 ***
25024696-C-T 22878549-C-T g1 ***
25132472-A-G 22986325-A-G g1 ***
25142161-C-T 22996014-C-T g1 ***
22257035-TA-T 20095149-TA-T DYZ19 ***
25786996-TTGTG-T 23640849-TTGTG-T P1_b3 12×TG***
5830179-C-A 5962138-C-A ***
28773593-C-A 26627446-C-A ***
13489768-CCG-C 11334092-CCG-C ***
56829662-A-C,G ***
18691838-CTTT-C,CTT 16579958-CTTT-C,CTT 14×T***
22698929-CTT-C,CT 20537043-CTT-C,CT 13×T***
13470484-C-T 11314808-C-T ***
19091406-GTT-G 16979526-GTT-G 14×T***
18847786-C-A 16735906-C-A ***
8119045-C-T 8251004-C-T ***
10864690-T-G ***
3267745-C-A 3399704-C-A ***
19436730-AAGAAAGAA-A,AAGAAAGAG 17324850-AAGAAAGAA-A,AAGAAAGAG ***
8768581-G-T 8900540-G-T ***
56832012-C-CCACTG ***
22100771-G-A 19938885-G-A B475 ***
56685661-G-C ***
2840099-CAAAA-C,CAAA 2972058-CAAAA-C,CAAA 20×A***
7095276-C-A 7227235-C-A ***
7180167-G-T 7312126-G-T ***
7299552-CA-C 7431511-CA-C ***
7625137-T-A 7757096-T-A ***
7643555-A-G 7775514-A-G ***
8084369-C-A 8216328-C-A ***
9144110-C-A 9306501-C-A ***
9649358-G-T 9811749-G-T IR3_Prx ***
10673947-C-CGGTTT ***
10893731-T-C ***
13477700-C-A 11322024-C-A ***
13477820-C-A 11322144-C-A ***
13932834-G-A 11812128-G-A ***
14071354-CTTTTTT-C,CTTTTT 11950648-CTTTTTT-C,CTTTTT 25×T***
14079560-C-A 11958854-C-A ***
14108501-C-A 11987795-C-A ***
14405839-C-T 12285136-C-T ***
14418082-C-A 12297379-C-A ***
14517528-C-A 12405729-C-A ***
14626230-A-G 12514298-A-G ***
16427981-G-T 14316101-G-T ***
16719973-A-T 14608093-A-T ***
17324504-C-A 15212624-C-A ***
19037857-T-A 16925977-T-A ***
21138615-G-T 18976729-G-T ***
21329438-G-T 19167552-G-T ***
21891065-C-A 19729179-C-A ***
22100750-G-A 19938864-G-A ***
22100752-C-T 19938866-C-T ***
22100757-G-A 19938871-G-A ***
22100764-G-A 19938878-G-A ***
22100766-G-T 19938880-G-T ***
22825064-C-A 20663178-C-A ***
23205278-T-A 21043392-T-A ***
23482923-G-A 21321037-G-A ***
23952886-C-A 21806739-C-A ***
28657098-C-A 26510951-C-A ***
28657101-C-A 26510954-C-A ***
56826788-A-G ***
56830724-C-A ***
35494-A-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual17515267-C-T15403387-C-T2T