Ellis
FTDNA: 239895Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 239895 |
---|---|---|---|---|---|---|---|---|
7655584-C-T | 7787543-C-T | A857 | FGC15565 | Y | Y | + | ||
7832071-G-GTCTTTCTTTCTTTCTT | 7964030-G-GTCTTTCTTTCTTTCTT | 18×TCTT | + | |||||
6378348-C-T | 6510307-C-T | A305 | + | |||||
7958802-A-C | 8090761-A-C | FGC15566 | Y | Y | + | |||
8303867-G-A | 8435826-G-A | FGC15567 | Y | Y | + | |||
9054133-G-T | 9216524-G-T | FGC15569 | Y | + | ||||
18537724-G-A | 16425844-G-A | FGC15572 | + | |||||
19505846-T-C | 17393966-T-C | BY55210 | Y | Y | + | |||
22099892-G-A | 19938006-G-A | FGC15575 | Y | Y | + | |||
22485741-A-T | 20323855-A-T | DYZ19 | + | |||||
27315980-C-T | 25169833-C-T | FGC82846 | P1_g3 | + | ||||
13858155-T-G | 11737449-T-G | ** | ||||||
13740616-A-T | 11584940-A-T | ** | ||||||
20602087-A-G | 18440201-A-G | P5_Dst | ** | |||||
13839836-GGGTGGAACGT-G | 11719130-GGGTGGAACGT-G | ** | ||||||
13740615-A-T | 11584939-A-T | ** | ||||||
13732561-C-G | 11576885-C-G | ** | ||||||
16172191-C-G | 14060311-C-G | CTS5264 FGC2043 | ** | |||||
15422968-C-A | 13311088-C-A | 14×A | ** | |||||
4326081-C-A | 4458040-C-A | FGC15564 | ** | |||||
13732560-T-C | 11576884-T-C | ** | ||||||
13732565-G-A | 11576889-G-A | ** | ||||||
13732571-C-T | 11576895-C-T | ** | ||||||
13732589-T-G | 11576913-T-G | ** | ||||||
13680885-G-C | 11525209-G-C | *** | ||||||
28784657-G-T | 26638510-G-T | *** | ||||||
22502295-T-TA,TT | 20340409-T-TA,TT | DYZ19 | *** | |||||
10023660-GCCTATTTC-G | 10186051-GCCTATTTC-G | *** | ||||||
13142008-C-T | 10631494-C-T | *** | ||||||
13454011-G-A | 11298335-G-A | *** | ||||||
13454021-C-T | 11298345-C-T | *** | ||||||
13455306-C-A | 11299630-C-A | *** | ||||||
13676275-G-A | 11520599-G-A | *** | ||||||
13680860-G-C | 11525184-G-C | *** | ||||||
13680863-G-A,T | 11525187-G-A,T | *** | ||||||
13680909-A-C,T | 11525233-A-C,T | *** | ||||||
13680934-T-A | 11525258-T-A | *** | ||||||
13680980-G-T | 11525304-G-T | *** | ||||||
13799205-G-A | 11678499-G-A | *** | ||||||
13800613-T-G | 11679907-T-G | *** | ||||||
13804717-A-G | 11684011-A-G | *** | ||||||
13812083-A-G | 11691377-A-G | *** | ||||||
13813212-C-G | 11692506-C-G | *** | ||||||
13818091-A-T | 11697385-A-T | *** | ||||||
13829390-T-G | 11708684-T-G | *** | ||||||
13832906-A-G | 11712200-A-G | *** | ||||||
18378989-C-T | 16267109-C-T | P6_Prx | *** | |||||
27810184-C-G | 25664037-C-G | P1_Y2 | 21×AAAG | *** | ||||
28787260-G-A | 26641113-G-A | *** | ||||||
28787321-G-A | 26641174-G-A | BY151292 | *** | |||||
28787346-GTGGAA-G | 26641199-GTGGAA-G | 5×TGGAA | *** | |||||
13454583-G-A | 11298907-G-A | BY50604 | *** | |||||
13828036-C-G | 11707330-C-G | *** | ||||||
13843864-T-G | 11723158-T-G | *** | ||||||
23720433-TAA-T | 21558547-TAA-T | 15×A | *** | |||||
27082352-GGAA-G | 24936205-GGAA-G | P1_r4 | 5×GAA | *** | ||||
13139209-T-C | 10628695-T-C | *** | ||||||
13680780-G-C | 11525104-G-C | *** | ||||||
13680790-G-C | 11525114-G-C | BY8909 | *** | |||||
13680802-A-T | 11525126-A-T | BY8905 | *** | |||||
13846517-CCAGAATGGATTCCAA-C | 11725811-CCAGAATGGATTCCAA-C | *** | ||||||
16108639-A-T | 13996759-A-T | P8_Prx | *** | |||||
13138715-T-C | 10628201-T-C | *** | ||||||
13138729-C-T | 10628215-C-T | *** | ||||||
13138833-T-C | 10628319-T-C | *** | ||||||
13138838-C-T | 10628324-C-T | *** | ||||||
13196125-T-C | 11040449-T-C | *** | ||||||
13196136-C-T | 11040460-C-T | *** | ||||||
13452683-T-C | 11297007-T-C | *** | ||||||
13470159-G-C | 11314483-G-C | *** | ||||||
13658914-A-G | 11503238-A-G | FT447448 | *** | |||||
13664836-T-A | 11509160-T-A | *** | ||||||
13680694-A-T | 11525018-A-T | *** | ||||||
13680696-G-A | 11525020-G-A | BY88211 | *** | |||||
13680705-A-G | 11525029-A-G | *** | ||||||
13734996-T-G | 11579320-T-G | *** | ||||||
13805046-A-G | 11684340-A-G | *** | ||||||
13811911-G-T | 11691205-G-T | *** | ||||||
13812959-T-A | 11692253-T-A | *** | ||||||
13817517-C-G | 11696811-C-G | *** | ||||||
13817525-A-C | 11696819-A-C | *** | ||||||
13817530-G-A | 11696824-G-A | FT350271 | *** | |||||
13817532-C-G | 11696826-C-G | *** | ||||||
13818693-G-A | 11697987-G-A | FTA3208 | *** | |||||
13818728-G-A | 11698022-G-A | *** | ||||||
13842277-A-G | 11721571-A-G | *** | ||||||
13847328-A-G | 11726622-A-G | *** | ||||||
13851142-C-A | 11730436-C-A | *** | ||||||
13859467-A-G | 11738761-A-G | *** | ||||||
13859472-A-G | 11738766-A-G | *** | ||||||
28798978-T-A | 26652831-T-A | *** | ||||||
58978329-G-C | 56832182-G-C | 4×CATTC | *** | |||||
58981304-C-T | 56835157-C-T | *** | ||||||
58982746-C-T | 56836599-C-T | *** | ||||||
13142066-A-C | 10631552-A-C | *** | ||||||
13678644-G-A | 11522968-G-A | *** | ||||||
13829429-A-G | 11708723-A-G | *** | ||||||
13661164-T-C | 11505488-T-C | *** | ||||||
13451191-T-C,TCCATTCCATTCCATTC | 11295515-T-C,TCCATTCCATTCCATTC | *** | ||||||
13648957-TGTAAA-T | 11493281-TGTAAA-T | *** | ||||||
13674868-A-G | 11519192-A-G | *** | ||||||
13820801-A-C | 11700095-A-C | *** | ||||||
13841490-A-G | 11720784-A-G | FT70968 | *** | |||||
13863371-C-G | 11742665-C-G | *** | ||||||
13863436-ATGCAATGGAT-A | 11742730-ATGCAATGGAT-A | *** | ||||||
13863449-C-G | 11742743-C-G | *** | ||||||
13196112-C-T | 11040436-C-T | *** | ||||||
13452718-C-T | 11297042-C-T | *** | ||||||
58977633-T-C | 56831486-T-C | *** | ||||||
13663795-T-G | 11508119-T-G | *** | ||||||
13137968-C-A | 10627454-C-A | *** | ||||||
13452693-A-C | 11297017-A-C | *** | ||||||
13458603-G-C,T | 11302927-G-C,T | *** | ||||||
13663789-A-T | 11508113-A-T | *** | ||||||
13663790-A-G | 11508114-A-G | *** | ||||||
13663915-T-G | 11508239-T-G | *** | ||||||
13804449-A-G | 11683743-A-G | *** | ||||||
13856635-C-A | 11735929-C-A | *** | ||||||
13856652-C-G | 11735946-C-G | *** | ||||||
13865605-T-G | 11744899-T-G | *** | ||||||
58976407-C-T | 56830260-C-T | *** | ||||||
58982736-C-T | 56836589-C-T | *** | ||||||
9935192-A-G | 10097583-A-G | *** | ||||||
13817527-G-C | 11696821-G-C | *** | ||||||
13832889-A-T | 11712183-A-T | *** | ||||||
13832895-A-C | 11712189-A-C | *** | ||||||
13805370-T-A | 11684664-T-A | *** | ||||||
13680795-G-T | 11525119-G-T | A12737 | *** | |||||
22337066-A-T | 20175180-A-T | DYZ19 | *** | |||||
28799838-G-T | 26653691-G-T | *** | ||||||
13664596-G-A | 11508920-G-A | *** | ||||||
13138808-T-C | 10628294-T-C | *** | ||||||
13859462-A-G | 11738756-A-G | *** | ||||||
9968263-C-T | 10130654-C-T | *** | ||||||
13139232-A-T | 10628718-A-T | *** | ||||||
13799514-T-G | 11678808-T-G | *** | ||||||
13804712-A-G | 11684006-A-G | *** | ||||||
13805210-T-C | 11684504-T-C | *** | ||||||
13805220-T-G | 11684514-T-G | *** | ||||||
13805226-G-C | 11684520-G-C | *** | ||||||
13805227-G-A | 11684521-G-A | *** | ||||||
13805231-C-G | 11684525-C-G | *** | ||||||
13817515-C-A | 11696809-C-A | *** | ||||||
13820073-C-T | 11699367-C-T | BY90517 | *** | |||||
13826036-A-G | 11705330-A-G | *** | ||||||
13828038-T-A | 11707332-T-A | *** | ||||||
13838348-G-A | 11717642-G-A | *** | ||||||
13853792-T-G | 11733086-T-G | *** | ||||||
13854433-C-G | 11733727-C-G | *** | ||||||
13856656-C-T | 11735950-C-T | FT41245 | *** | |||||
13861167-G-A | 11740461-G-A | *** | ||||||
28798959-G-T | 26652812-G-T | *** | ||||||
28798987-G-A | 26652840-G-A | *** | ||||||
28799034-T-G | 26652887-T-G | *** | ||||||
28801038-T-G | 26654891-T-G | *** | ||||||
58876824-C-G | 56714047-G-C | *** | ||||||
58912767-G-C | 56678104-C-G | *** | ||||||
58912787-G-C | 56678084-C-G | *** | ||||||
58912934-C-A | 56677937-G-T | *** | ||||||
58972229-G-T | 56826082-G-T | *** | ||||||
13850175-G-T | 11729469-G-T | *** | ||||||
13452531-T-C | 11296855-T-C | *** | ||||||
13457897-G-A | 11302221-G-A | *** | ||||||
13828028-G-A | 11707322-G-A | *** | ||||||
13849124-T-A | 11728418-T-A | *** | ||||||
13854237-T-G | 11733531-T-G | *** | ||||||
28785804-A-G | 26639657-A-G | *** | ||||||
28785821-T-G | 26639674-T-G | *** | ||||||
28785834-A-G | 26639687-A-G | *** | ||||||
28785841-C-G | 26639694-C-G | *** | ||||||
28799108-T-G | 26652961-T-G | *** | ||||||
28799839-A-G | 26653692-A-G | *** | ||||||
28800179-A-G | 26654032-A-G | *** | ||||||
58976348-C-T | 56830201-C-T | *** | ||||||
58976349-A-C | 56830202-A-C | *** | ||||||
58981970-T-A | 56835823-T-A | *** | ||||||
13651907-T-C | 11496231-T-C | *** | ||||||
13810022-T-A | 11689316-T-A | *** | ||||||
13818177-CAAAAGGAATA-C | 11697471-CAAAAGGAATA-C | *** | ||||||
13841276-G-C | 11720570-G-C | FT138095 | *** | |||||
13841288-A-T | 11720582-A-T | *** | ||||||
13489631-A-C | 11333955-A-C | *** | ||||||
13142081-T-C | 10631567-T-C | *** | ||||||
13804447-A-T | 11683741-A-T | *** | ||||||
13818275-C-A | 11697569-C-A | *** | ||||||
13830375-A-G | 11709669-A-G | *** | ||||||
13848059-C-A | 11727353-C-A | *** | ||||||
13848362-A-G | 11727656-A-G | *** | ||||||
13848363-T-G | 11727657-T-G | *** | ||||||
13856776-CAAATG-C | 11736070-CAAATG-C | *** | ||||||
13858030-G-C | 11737324-G-C | FT388595 | *** | |||||
13860681-C-T | 11739975-C-T | A19788 | *** | |||||
28798989-G-T | 26652842-G-T | *** | ||||||
28799010-G-A | 26652863-G-A | FT376071 | *** | |||||
58982731-C-T | 56836584-C-T | *** | ||||||
58982741-C-T | 56836594-C-T | *** | ||||||
28785102-A-T | 26638955-A-T | *** | ||||||
13194772-C-T | 11039096-C-T | FT440470 | *** | |||||
13680882-A-T | 11525206-A-T | *** | ||||||
58978324-A-C | 56832177-A-C | *** | ||||||
13804390-G-A | 11683684-G-A | *** | ||||||
58855360-C-T | 56735511-G-A | *** | ||||||
13483494-G-C | 11327818-G-C | *** | ||||||
10023644-G-T | 10186035-G-T | *** | ||||||
13139458-T-A | 10628944-T-A | *** | ||||||
13139460-T-A | 10628946-T-A | *** | ||||||
13452698-T-C | 11297022-T-C | *** | ||||||
13799199-T-C | 11678493-T-C | *** | ||||||
13848411-C-T | 11727705-C-T | FGC42925 | *** | |||||
13858642-G-A,C | 11737936-G-A,C | *** | ||||||
13861165-A-G | 11740459-A-G | *** | ||||||
28784604-C-G | 26638457-C-G | *** | ||||||
58846063-G-GCATTC | 56744796-C-CGGAAT | *** | ||||||
13680735-A-G | 11525059-A-G | *** | ||||||
10018449-T-A | 10180840-T-A | *** | ||||||
13832914-A-G | 11712208-A-G | *** | ||||||
13656988-T-C | 11501312-T-C | *** | ||||||
13804706-T-G | 11684000-T-G | *** | ||||||
28784817-G-A | 26638670-G-A | *** | ||||||
13660583-G-A | 11504907-G-A | *** | ||||||
13661130-G-T | 11505454-G-T | FT447525 | *** | |||||
13661134-A-T | 11505458-A-T | *** | ||||||
13661263-T-A | 11505587-T-A | *** | ||||||
13678694-A-G | 11523018-A-G | *** | ||||||
13700993-T-G | 11545317-T-G | *** | ||||||
13809578-A-C | 11688872-A-C | *** | ||||||
13809946-G-A | 11689240-G-A | *** | ||||||
19036743-TAA-T | 16924863-TAA-T | *** | ||||||
25465346-A-AT | 23319199-A-AT | P2_r2 | 15×T | *** | ||||
58844535-T-C | 56746336-A-G | *** | ||||||
58855262-A-C | 56735609-T-G | *** | ||||||
13453613-CTTTTA-C,GGGTTA | 11297937-CTTTTA-C,GGGTTA | *** | ||||||
58983165-C-T | 56837018-C-T | *** | ||||||
13833770-T-A | 11713064-T-A | *** | ||||||
13860702-T-A | 11739996-T-A | *** | ||||||
21687951-A-AAC | 19526065-A-AAC | 17×AC | *** | |||||
28799008-G-A | 26652861-G-A | 5×GGAAT | *** | |||||
13138720-G-C | 10628206-G-C | *** | ||||||
13828196-C-G | 11707490-C-G | *** | ||||||
13828202-A-G | 11707496-A-G | *** | ||||||
13841281-G-A | 11720575-G-A | BY91131 | *** | |||||
13841298-T-A | 11720592-T-A | *** | ||||||
13847064-C-G | 11726358-C-G | *** | ||||||
58978312-T-C | 56832165-T-C | *** | ||||||
13805486-C-G | 11684780-C-G | *** | ||||||
13824665-A-T | 11703959-A-T | F11107 | *** | |||||
13858287-T-C | 11737581-T-C | *** | ||||||
28801009-T-G | 26654862-T-G | *** | ||||||
58981966-C-T | 56835819-C-T | *** | ||||||
58981975-AT-A,AC | 56835828-AT-A,AC | *** | ||||||
13469116-T-A | 11313440-T-A | *** | ||||||
13680964-T-C | 11525288-T-C | *** | ||||||
13683111-A-T | 11527435-A-T | *** | ||||||
13683114-G-A | 11527438-G-A | *** | ||||||
28785831-C-G | 26639684-C-G | *** | ||||||
13454700-G-T | 11299024-G-T | *** | ||||||
13663933-T-A | 11508257-T-A | *** | ||||||
13799951-C-G | 11679245-C-G | *** | ||||||
13804699-C-A | 11683993-C-A | *** | ||||||
13804714-A-G | 11684008-A-G | *** | ||||||
13804719-T-G | 11684013-T-G | *** | ||||||
13804725-T-C | 11684019-T-C | *** | ||||||
13804731-C-T | 11684025-C-T | *** | ||||||
13805402-G-GAGCCTAACAGAAGAGAATCGAACAGAATAGCATCA | 11684696-G-GAGCCTAACAGAAGAGAATCGAACAGAATAGCATCA | *** | ||||||
13810773-A-G | 11690067-A-G | *** | ||||||
13824670-C-T | 11703964-C-T | FT365252 | *** | |||||
13828200-C-T | 11707494-C-T | FT160000 | *** | |||||
13828512-G-A | 11707806-G-A | *** | ||||||
13828521-G-A | 11707815-G-A | *** | ||||||
13828536-G-A | 11707830-G-A | *** | ||||||
13828537-G-A | 11707831-G-A | *** | ||||||
13841365-T-G | 11720659-T-G | *** | ||||||
13848074-A-G | 11727368-A-G | *** | ||||||
13855091-T-G | 11734385-T-G | *** | ||||||
13856759-A-ATC | 11736053-A-ATC | *** | ||||||
13859749-T-C | 11739043-T-C | *** | ||||||
13860474-C-G | 11739768-C-G | *** | ||||||
58844528-G-T | 56746343-C-A | *** | ||||||
28801729-G-A | 26655582-G-A | *** | ||||||
13452668-C-T | 11296992-C-T | *** | ||||||
13653032-T-G | 11497356-T-G | *** | ||||||
13847060-A-G | 11726354-A-G | *** | ||||||
13680979-T-C | 11525303-T-C | *** | ||||||
13680768-A-G | 11525092-A-G | *** | ||||||
13680869-A-C,T | 11525193-A-C,T | 4×GGAAT | *** | |||||
13812767-T-G | 11692061-T-G | *** | ||||||
13681069-A-T | 11525393-A-T | *** | ||||||
22147867-T-C | 19985981-T-C | *** | ||||||
13661987-C-A | 11506311-C-A | *** | ||||||
13448626-C-T | 11292950-C-T | *** | ||||||
13678529-A-G | 11522853-A-G | *** | ||||||
13824764-G-A | 11704058-G-A | *** | ||||||
13828466-T-G | 11707760-T-G | *** | ||||||
13829598-A-T | 11708892-A-T | *** | ||||||
13861157-T-A | 11740451-T-A | *** | ||||||
13866279-G-C | 11745573-G-C | *** | ||||||
22147870-T-C | 19985984-T-C | *** | ||||||
22147872-T-C | 19985986-T-C | *** | ||||||
58912765-A-T | 56678106-T-A | *** | ||||||
58982721-C-T | 56836574-C-T | *** | ||||||
13143617-C-T | 10633103-C-T | *** | ||||||
13143622-C-T | 10633108-C-T | *** | ||||||
58977271-T-C | 56831124-T-C | *** | ||||||
13852615-TGGAAA-T | 11731909-TGGAAA-T | *** | ||||||
13657056-C-G | 11501380-C-G | *** | ||||||
13657084-A-T | 11501408-A-T | *** | ||||||
13805240-T-C | 11684534-T-C | FT425910 | *** | |||||
13829395-A-G | 11708689-A-G | *** | ||||||
13458568-T-C | 11302892-T-C | *** | ||||||
13815688-A-G | 11694982-A-G | *** | ||||||
13661240-A-C | 11505564-A-C | *** | ||||||
13454512-A-C | 11298836-A-C | *** | ||||||
13454520-G-T | 11298844-G-T | *** | ||||||
28800311-G-T | 26654164-G-T | *** | ||||||
28800318-A-T | 26654171-A-T | *** | ||||||
58972077-G-C | 56825930-G-C | *** | ||||||
9196232-T-G | 9358623-T-G | *** | ||||||
10023783-G-C | 10186174-G-C | FGC67094 | *** | |||||
13680706-A-G | 11525030-A-G | *** | ||||||
13680870-G-A | 11525194-G-A | *** | ||||||
13858288-T-A | 11737582-T-A | *** | ||||||
28800326-G-C | 26654179-G-C | *** | ||||||
25461433-CTT-C | 23315286-CTT-C | P2_r2 | 26×T | *** | ||||
13799547-T-A | 11678841-T-A | *** | ||||||
13860479-C-G | 11739773-C-G | *** | ||||||
58982060-C-G | 56835913-C-G | *** | ||||||
58972240-G-C | 56826093-G-C | 4×ATTCC | *** | |||||
13821068-GGAATC-G | 11700362-GGAATC-G | *** | ||||||
13828552-C-A,G | 11707846-C-A,G | *** | ||||||
10017939-C-T | 10180330-C-T | *** | ||||||
13824672-A-G | 11703966-A-G | *** | ||||||
13832905-G-T | 11712199-G-T | *** | ||||||
13681023-C-A,T | 11525347-C-A,T | *** | ||||||
13664806-A-G | 11509130-A-G | *** | ||||||
13664808-G-A | 11509132-G-A | *** | ||||||
13664826-A-G | 11509150-A-G | *** | ||||||
13454618-T-A | 11298942-T-A | *** | ||||||
13815391-A-T | 11694685-A-T | *** | ||||||
13858169-A-T | 11737463-A-T | *** | ||||||
28802826-A-G | 26656679-A-G | *** | ||||||
13828566-A-G,T | 11707860-A-G,T | *** | ||||||
13858165-C-A | 11737459-C-A | *** | ||||||
58972232-C-T | 56826085-C-T | *** | ||||||
13454516-T-C | 11298840-T-C | *** | ||||||
13799964-T-C | 11679258-T-C | *** | ||||||
13140975-C-T | 10630461-C-T | *** | ||||||
13485740-G-T | 11330064-G-T | *** | ||||||
13483219-T-A,G | 11327543-T-A,G | *** | ||||||
22473593-A-T | 20311707-A-T | BY24596 | DYZ19 | *** | ||||
13139337-T-C | 10628823-T-C | *** | ||||||
13866274-T-C,G | 11745568-T-C,G | *** | ||||||
28800331-C-T | 26654184-C-T | Y81108 | *** | |||||
13143026-A-T | 10632512-A-T | *** | ||||||
23176799-AGAAGGAAG-A | 21014913-AGAAGGAAG-A | 11×GAAG | *** | |||||
24417006-A-AAAAGAAAGAAAG | 22270859-A-AAAAGAAAGAAAG | 18×AAAG | *** | |||||
13801344-T-G | 11680638-T-G | *** | ||||||
13138223-T-C | 10627709-T-C | *** | ||||||
13731459-T-A | 11575783-T-A | *** | ||||||
58831777-C-A | 56759094-G-T | *** | ||||||
13846668-C-T | 11725962-C-T | F11172 | *** | |||||
13828186-A-G | 11707480-A-G | *** | ||||||
13801214-G-T | 11680508-G-T | *** | ||||||
13801715-A-G | 11681009-A-G | *** | ||||||
58976342-C-T | 56830195-C-T | *** | ||||||
20690528-C-T | 18528642-C-T | P4_Prx | *** | |||||
13454533-G-A | 11298857-G-A | *** | ||||||
13854432-T-G | 11733726-T-G | *** | ||||||
13856858-A-C | 11736152-A-C | *** | ||||||
13858277-T-A | 11737571-T-A | *** | ||||||
22245001-C-G | 20083115-C-G | DYZ19 | *** | |||||
9952159-C-A | 10114550-C-A | *** | ||||||
9973942-A-T | 10136333-A-T | *** | ||||||
10023616-C-T | 10186007-C-T | *** | ||||||
13137984-G-A | 10627470-G-A | *** | ||||||
13138700-A-C | 10628186-A-C | *** | ||||||
13138701-G-C | 10628187-G-C | *** | ||||||
13138853-T-C | 10628339-T-C | *** | ||||||
13138863-T-C | 10628349-T-C | *** | ||||||
13195318-T-C | 11039642-T-C | *** | ||||||
13196107-C-G | 11040431-C-G | *** | ||||||
13196117-C-A | 11040441-C-A | *** | ||||||
13458563-T-C | 11302887-T-C | *** | ||||||
13464360-A-AC,G | 11308684-A-AC,G | *** | ||||||
13485736-C-G | 11330060-C-G | *** | ||||||
13657063-AAGTAG-A | 11501387-AAGTAG-A | *** | ||||||
13664800-A-G | 11509124-A-G | *** | ||||||
13678668-C-T | 11522992-C-T | *** | ||||||
13678709-T-G | 11523033-T-G | *** | ||||||
13680753-A-G | 11525077-A-G | *** | ||||||
13799505-G-A | 11678799-G-A | *** | ||||||
13802030-G-A | 11681324-G-A | *** | ||||||
13809231-A-G | 11688525-A-G | *** | ||||||
13809232-C-T | 11688526-C-T | *** | ||||||
13809233-T-C | 11688527-T-C | *** | ||||||
13809243-G-A | 11688537-G-A | FT216110 | *** | |||||
13809248-G-C | 11688542-G-C | *** | ||||||
13809253-C-G | 11688547-C-G | *** | ||||||
13809260-A-C | 11688554-A-C | *** | ||||||
13817341-C-T | 11696635-C-T | FT186074 | *** | |||||
13824953-T-C | 11704247-T-C | *** | ||||||
13826665-A-G | 11705959-A-G | *** | ||||||
13826678-G-T | 11705972-G-T | *** | ||||||
13828175-A-T | 11707469-A-T | *** | ||||||
13828476-C-A | 11707770-C-A | *** | ||||||
13828481-G-C | 11707775-G-C | *** | ||||||
13829385-A-G | 11708679-A-G | *** | ||||||
13833447-G-C | 11712741-G-C | *** | ||||||
13833460-T-A | 11712754-T-A | *** | ||||||
13833467-G-C | 11712761-G-C | *** | ||||||
13833475-T-G | 11712769-T-G | *** | ||||||
13835418-C-T | 11714712-C-T | *** | ||||||
13840584-A-T | 11719878-A-T | *** | ||||||
13844865-T-A | 11724159-T-A | *** | ||||||
13846754-C-G | 11726048-C-G | *** | ||||||
13847095-G-C | 11726389-G-C | *** | ||||||
13847097-T-A | 11726391-T-A | *** | ||||||
13847549-G-T | 11726843-G-T | *** | ||||||
13848058-T-C | 11727352-T-C | *** | ||||||
13848102-C-T | 11727396-C-T | BY91331 | *** | |||||
13848126-A-G | 11727420-A-G | *** | ||||||
13850168-G-A | 11729462-G-A | *** | ||||||
13852511-A-G | 11731805-A-G | *** | ||||||
13854985-A-T | 11734279-A-T | *** | ||||||
13855041-T-C | 11734335-T-C | *** | ||||||
13856911-G-A | 11736205-G-A | *** | ||||||
13858159-C-A,T | 11737453-C-A,T | *** | ||||||
13858161-G-T | 11737455-G-T | *** | ||||||
13858171-A-G | 11737465-A-G | *** | ||||||
13858269-A-G | 11737563-A-G | *** | ||||||
13858272-A-C | 11737566-A-C | *** | ||||||
13861139-T-G | 11740433-T-G | *** | ||||||
13865635-C-G | 11744929-C-G | *** | ||||||
13865670-C-G | 11744964-C-G | *** | ||||||
13865674-A-G | 11744968-A-G | *** | ||||||
13865707-A-C | 11745001-A-C | *** | ||||||
13868658-T-A | 11747952-T-A | *** | ||||||
18358953-A-C | 16247073-A-C | P6_Prx | *** | |||||
19584544-T-G | 17472664-T-G | P5_Prx | *** | |||||
19998283-C-T | 17886403-C-T | P5_Prx | *** | |||||
22220772-G-T | 20058886-G-T | DYZ19 | *** | |||||
22253121-GT-G | 20091235-GT-G | DYZ19 | *** | |||||
22253123-T-A | 20091237-T-A | DYZ19 | *** | |||||
22337954-T-C | 20176068-T-C | DYZ19 | *** | |||||
22369006-G-C | 20207120-G-C | DYZ19 | *** | |||||
22469996-G-A | 20308110-G-A | FGC82845 | DYZ19 | *** | ||||
22477744-C-A | 20315858-C-A | FGC15576 | DYZ19 | *** | ||||
23719040-C-T | 21557154-C-T | *** | ||||||
24836960-T-C | 22690813-T-C | P3_b2 | *** | |||||
25151621-A-C | 23005474-A-C | g1 | *** | |||||
25785249-T-A | 23639102-T-A | P1_b3 | *** | |||||
25933923-A-G | 23787776-A-G | P1_Y1 | *** | |||||
28784641-A-G | 26638494-A-G | *** | ||||||
28785819-A-G | 26639672-A-G | *** | ||||||
28799840-GTGGAT-G | 26653693-GTGGAT-G | *** | ||||||
28800339-A-C | 26654192-A-C | *** | ||||||
58846019-G-C | 56744852-C-G | *** | ||||||
58855365-C-T | 56735506-G-A | *** | ||||||
58912894-A-C | 56677977-T-G | *** | ||||||
58912903-C-A | 56677968-G-T | *** | ||||||
58912910-T-G | 56677961-A-C | *** | ||||||
58974101-G-A | 56827954-G-A | *** | ||||||
58976347-C-T | 56830200-C-T | *** | ||||||
58982714-G-C | 56836567-G-C | *** | ||||||
58982716-T-C | 56836569-T-C | *** | ||||||
58982726-A-C,T | 56836579-A-C,T | *** | ||||||
13680892-C-CATGGA | 11525216-C-CATGGA | *** | ||||||
13141762-G-GCCATTCCATT,T | 10631248-G-GCCATTCCATT,T | 11×CCATT | *** | |||||
13800987-A-G,T | 11680281-A-G,T | *** | ||||||
13140972-T-C,TC | 10630458-T-C,TC | *** | ||||||
58979103-T-TTACATTCCAC,TTCCATTCCAC | 56832956-T-TTACATTCCAC,TTCCATTCCAC | *** | ||||||
13142948-GCATTC-C,G | 10632434-GCATTC-C,G | 11×CATTC | *** | |||||
13866697-T-A,C | 11745991-T-A,C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.