Savage
FGC: QN44Z, FTDNA: 312232MDKA Birth: Northern Ireland
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC QN44Z | Manual Edits |
---|---|---|---|---|---|---|---|---|---|
17446661-G-A | 15334781-G-A | L158 | CTS7373 PF4024 | Y | Y | + | |||
3744303-G-T | 3876262-G-T | FGC40932 | + | ||||||
4226587-G-C | 4358546-G-C | FGC40933 | + | ||||||
4249029-C-A | 4380988-C-A | FGC40934 | + | ||||||
5595286-T-C | 5727245-T-C | FGC40935 | + | ||||||
6347446-T-G | 6479405-T-G | FGC40936 | + | ||||||
6782476-A-T | 6914435-A-T | FGC40937 | Y | Y | + | ||||
6906117-T-C | 7038076-T-C | FGC40938 | Y | Y | + | ||||
8331226-C-T | 8463185-C-T | FGC40941 | Y | Y | + | ||||
17532397-C-T | 15420517-C-T | FGC40944 | Y | Y | + | ||||
18610066-C-T | 16498186-C-T | FGC40945 | Y | Y | + | ||||
19556698-G-A | 17444818-G-A | FGC40946 | Y | + | |||||
21555109-G-A | 19393223-G-A | FGC40950 | Y | Y | + | ||||
22782756-G-A | 20620870-G-A | Y1120 | ** | ||||||
13392858-A-C | 11237182-A-C | ** | |||||||
27895460-A-T | 25749313-A-T | P1_Y2 | ** | ||||||
6347777-G-GGAAGGAAGGAAGGAAA | 6479736-G-GGAAGGAAGGAAGGAAA | 9×GAAA | ** | ||||||
58856399-T-C | 56734472-A-G | ** | |||||||
5462791-G-T | 5594750-G-T | ** | |||||||
5813113-C-T | 5945072-C-T | ** | |||||||
7142433-C-T | 7274392-C-T | ** | |||||||
8177601-C-A | 8309560-C-A | ** | |||||||
10001195-T-C | 10163586-T-C | ** | |||||||
13237282-A-G | 11081606-A-G | ** | |||||||
13314669-T-A | 11158993-T-A | ** | |||||||
16319423-A-G | 14207543-A-G | ** | |||||||
16381372-T-G | 14269492-T-G | ** | |||||||
16381381-C-T | 14269501-C-T | ** | |||||||
16502546-A-T | 14390666-A-T | ** | |||||||
17068271-T-G | 14956391-T-G | ** | |||||||
17699645-T-A | 15587765-T-A | ** | |||||||
18230186-G-A | 16118306-G-A | ** | |||||||
18230221-T-G | 16118341-T-G | ** | |||||||
18230333-A-G | 16118453-A-G | ** | |||||||
18230337-T-A | 16118457-T-A | ** | |||||||
21243033-G-C | 19081147-G-C | ** | |||||||
22692410-T-C | 20530524-T-C | ** | |||||||
23087170-C-T | 20925284-C-T | ** | |||||||
24490613-C-T | 22344466-C-T | ** | |||||||
25530444-G-A | 23384297-G-A | P1_gr1 | ** | ||||||
28750508-G-A | 26604361-G-A | ** | |||||||
28760889-T-C | 26614742-T-C | ** | |||||||
5795860-CTTT-C | 5927819-CTTT-C | 18×T | ** | ||||||
9674735-CATAA-C | 9837126-CATAA-C | IR3_Prx | ** | ||||||
20989104-TACACACACACAC-T | 18827218-TACACACACACAC-T | P4_Dst | 25×AC | ** | |||||
23063697-CTTTT-C | 20901811-CTTTT-C | ** | |||||||
28478038-T-TATAG | 26331891-T-TATAG | 23×AG | ** | ||||||
22273575-T-G | 20111689-T-G | DYZ19 | *** | ||||||
25246398-TCTC-T | 23100251-TCTC-T | P2_r1 | 6×CTC | *** | |||||
27232111-TTTTCTTTCTTTC-T | 25085964-TTTTCTTTCTTTC-T | P1_g3 | 18×TTTC | *** | |||||
22357720-G-T | 20195834-G-T | DYZ19 | *** | ||||||
19436672-A-AAAAG | 17324792-A-AAAAG | 17×AAAG | *** | ||||||
19690156-TAAATAAAATA-T | 17578276-TAAATAAAATA-T | P5_Prx | 12×AAATA | *** | |||||
22357700-T-A | 20195814-T-A | DYZ19 | *** | ||||||
58844610-C-G | 56746261-G-C | *** | |||||||
58880737-C-T | 56710134-G-A | *** | |||||||
58884357-C-T | 56706514-G-A | *** | |||||||
22503118-GT-TC | 20341232-GT-TC | DYZ19 | *** | ||||||
22224527-C-A | 20062641-C-A | DYZ19 | *** | ||||||
22324759-A-T | 20162873-A-T | DYZ19 | *** | ||||||
22251344-T-A | 20089458-T-A | BY25026 | DYZ19 | *** | |||||
22251364-A-T | 20089478-A-T | PF1110 | DYZ19 | *** | |||||
58879555-A-G | 56711316-T-C | *** | |||||||
9429477-TAATA-T | 9591868-TAATA-T | *** | |||||||
13462744-C-T | 11307068-C-T | *** | |||||||
13470538-G-A | 11314862-G-A | *** | |||||||
13936212-G-GAAAA | 11815506-G-GAAAA | *** | |||||||
19049508-A-ATAT | 16937628-A-ATAT | *** | |||||||
28522769-C-T | 26376622-C-T | *** | |||||||
22266540-T-C | 20104654-T-C | DYZ19 | *** | ||||||
58879543-T-G | 56711328-A-C | *** | |||||||
13489528-CCGC-GCGA | 11333852-CCGC-GCGA | *** | |||||||
3313079-T-G | 3445038-T-G | *** | |||||||
25985761-G-T | 23839614-G-T | P1_Y1 | *** | ||||||
58860368-C-T | 56730503-G-A | *** | |||||||
7532276-GTA-G | 7664235-GTA-G | 28×TA | *** | ||||||
58866388-C-T | 56724483-G-A | *** | |||||||
13606877-C-A | 11451201-C-A | 25×A | *** | ||||||
24513426-G-A | 22367279-G-A | *** | |||||||
25717408-T-A | 23571261-T-A | P1_b3 | *** | ||||||
24646615-C-T | 22500468-C-T | P3_b2 | *** | ||||||
27971568-T-A | 25825421-T-A | P1_Y2 | *** | ||||||
22481328-TTTAGG-GTTATA | 20319442-TTTAGG-GTTATA | DYZ19 | *** | ||||||
58884859-T-G | 56706012-A-C | *** | |||||||
58858734-T-A | 56732137-A-T | *** | |||||||
22311205-CC-AA | 20149319-CC-AA | DYZ19 | *** | ||||||
22311214-GTGTGCAGAG-TTCTCCTGAC | 20149328-GTGTGCAGAG-TTCTCCTGAC | DYZ19 | *** | ||||||
22358366-G-T | 20196480-G-T | DYZ19 | *** | ||||||
22358394-A-T | 20196508-A-T | DYZ19 | *** | ||||||
25717443-G-A | 23571296-G-A | P1_b3 | *** | ||||||
22241243-GA-AC | 20079357-GA-AC | DYZ19 | *** | ||||||
58986219-TT-CAA | 56840072-TT-CAA | *** | |||||||
6015015-G-A | 6146974-G-A | *** | |||||||
58860156-A-T | 56730715-T-A | *** | |||||||
6014979-G-A | 6146938-G-A | *** | |||||||
6592268-G-A | 6724227-G-A | *** | |||||||
22241256-T-C | 20079370-T-C | DYZ19 | *** | ||||||
22266567-C-A | 20104681-C-A | DYZ19 | *** | ||||||
19329659-C-T | 17217779-C-T | YP467 | *** | ||||||
22251480-A-C | 20089594-A-C | DYZ19 | *** | ||||||
22252531-T-G | 20090645-T-G | BY43694 | DYZ19 | *** | |||||
2855396-A-G | 2987355-A-G | *** | |||||||
13462782-G-C | 11307106-G-C | *** | |||||||
22499199-C-G | 20337313-C-G | DYZ19 | *** | ||||||
13485422-C-G | 11329746-C-G | *** | |||||||
13460688-G-A | 11305012-G-A | *** | |||||||
2674386-G-A | 2806345-G-A | *** | |||||||
2772511-T-C | 2904470-T-C | *** | |||||||
3271031-C-T | 3402990-C-T | *** | |||||||
3312942-A-T | 3444901-A-T | FT14987 | *** | ||||||
3809540-A-C | 3941499-A-C | *** | |||||||
4228413-A-T | 4360372-A-T | *** | |||||||
4292315-G-T | 4424274-G-T | *** | |||||||
4428808-T-C | 4560767-T-C | *** | |||||||
4439178-G-C | 4571137-G-C | *** | |||||||
4641726-G-A | 4773685-G-A | *** | |||||||
4763432-G-C | 4895391-G-C | *** | |||||||
4817486-G-A | 4949445-G-A | *** | |||||||
4848614-C-T | 4980573-C-T | *** | |||||||
4869043-C-T | 5001002-C-T | *** | |||||||
5098694-A-T | 5230653-A-T | *** | |||||||
5113052-C-T | 5245011-C-T | *** | |||||||
5113677-T-A | 5245636-T-A | *** | |||||||
5148763-C-A | 5280722-C-A | *** | |||||||
5208190-T-G | 5340149-T-G | *** | |||||||
5209941-T-A | 5341900-T-A | *** | |||||||
5235821-A-T | 5367780-A-T | *** | |||||||
5241317-T-C | 5373276-T-C | *** | |||||||
5346022-A-C | 5477981-A-C | *** | |||||||
5394595-A-G | 5526554-A-G | *** | |||||||
5427921-C-T | 5559880-C-T | *** | |||||||
5430720-T-G | 5562679-T-G | *** | |||||||
5811304-G-T | 5943263-G-T | *** | |||||||
6014823-A-G | 6146782-A-G | *** | |||||||
6014847-G-A | 6146806-G-A | *** | |||||||
6014864-C-T | 6146823-C-T | *** | |||||||
6014894-G-A | 6146853-G-A | *** | |||||||
6014908-A-G | 6146867-A-G | *** | |||||||
6014998-T-A | 6146957-T-A | *** | |||||||
6117140-C-T | 6249099-C-T | FGC70276 | *** | ||||||
6160761-C-T | 6292720-C-T | IR3_Dst | *** | ||||||
6179735-G-T | 6311694-G-T | IR3_Dst | *** | ||||||
6181827-A-T | 6313786-A-T | IR3_Dst | *** | ||||||
6202406-T-C | 6334365-T-C | IR3_Dst | *** | ||||||
6202417-C-A | 6334376-C-A | IR3_Dst | *** | ||||||
6208576-C-A | 6340535-C-A | IR3_Dst | *** | ||||||
6492953-A-G | 6624912-A-G | FGC75738 | *** | ||||||
6494987-G-A | 6626946-G-A | *** | |||||||
6507486-A-C | 6639445-A-C | *** | |||||||
6559824-C-T | 6691783-C-T | *** | |||||||
6592264-A-C | 6724223-A-C | *** | |||||||
6683284-T-A | 6815243-T-A | *** | |||||||
6683306-G-A | 6815265-G-A | *** | |||||||
6750075-T-C | 6882034-T-C | *** | |||||||
6998455-A-C | 7130414-A-C | *** | |||||||
7395034-G-A | 7526993-G-A | *** | |||||||
7417984-G-T | 7549943-G-T | *** | |||||||
7567908-A-G | 7699867-A-G | *** | |||||||
7567915-C-T | 7699874-C-T | *** | |||||||
7567960-G-T | 7699919-G-T | *** | |||||||
7573141-T-A | 7705100-T-A | *** | |||||||
7709775-A-T | 7841734-A-T | *** | |||||||
7885956-C-A | 8017915-C-A | *** | |||||||
7896833-T-C | 8028792-T-C | *** | |||||||
7924628-T-A | 8056587-T-A | *** | |||||||
7924742-A-C | 8056701-A-C | *** | |||||||
8216568-C-A | 8348527-C-A | *** | |||||||
8371630-T-A | 8503589-T-A | *** | |||||||
8901190-C-T | 9033149-C-T | *** | |||||||
8972343-A-C | 9134734-A-C | *** | |||||||
9034270-C-T | 9196661-C-T | *** | |||||||
9034282-T-A | 9196673-T-A | *** | |||||||
9063605-G-T | 9225996-G-T | *** | |||||||
9191052-G-C | 9353443-G-C | *** | |||||||
9202243-A-G | 9364634-A-G | *** | |||||||
9214582-G-C | 9376973-G-C | *** | |||||||
9316429-G-A | 9478820-G-A | *** | |||||||
9338525-A-T | 9500916-A-T | *** | |||||||
9427705-G-A | 9590096-G-A | *** | |||||||
9430318-A-G | 9592709-A-G | *** | |||||||
9434071-A-C | 9596462-A-C | *** | |||||||
9587161-A-T | 9749552-A-T | IR3_Prx | *** | ||||||
9610922-A-T | 9773313-A-T | IR3_Prx | *** | ||||||
9620146-T-A | 9782537-T-A | IR3_Prx | *** | ||||||
9664772-G-A | 9827163-G-A | IR3_Prx | *** | ||||||
9668289-G-T | 9830680-G-T | IR3_Prx | *** | ||||||
9670193-A-T | 9832584-A-T | IR3_Prx | *** | ||||||
9935956-A-G | 10098347-A-G | *** | |||||||
10025313-A-G | 10187704-A-G | *** | |||||||
10058089-A-C | 10220480-A-C | *** | |||||||
10058096-A-G | 10220487-A-G | *** | |||||||
10058100-A-T | 10220491-A-T | *** | |||||||
13223193-A-G | 11067517-A-G | *** | |||||||
13223240-A-G | 11067564-A-G | *** | |||||||
13253230-A-C | 11097554-A-C | *** | |||||||
13253747-G-A | 11098071-G-A | *** | |||||||
13254187-A-C | 11098511-A-C | *** | |||||||
13254243-T-C | 11098567-T-C | *** | |||||||
13257332-T-C | 11101656-T-C | *** | |||||||
13257368-G-A | 11101692-G-A | *** | |||||||
13267494-G-T | 11111818-G-T | *** | |||||||
13311156-T-C | 11155480-T-C | *** | |||||||
13341652-C-T | 11185976-C-T | *** | |||||||
13460959-G-T | 11305283-G-T | *** | |||||||
13461083-G-A | 11305407-G-A | *** | |||||||
13461104-G-C | 11305428-G-C | *** | |||||||
13461161-C-G | 11305485-C-G | *** | |||||||
13461179-G-A | 11305503-G-A | *** | |||||||
13462711-C-A | 11307035-C-A | FT443926 | *** | ||||||
13462741-A-T | 11307065-A-T | *** | |||||||
13462755-G-T | 11307079-G-T | *** | |||||||
13462761-C-G | 11307085-C-G | FT443931 | *** | ||||||
13470537-A-C | 11314861-A-C | *** | |||||||
13474834-G-T | 11319158-G-T | *** | |||||||
13477042-T-G | 11321366-T-G | *** | |||||||
13477417-A-T | 11321741-A-T | *** | |||||||
13548640-C-T | 11392964-C-T | *** | |||||||
13583679-A-G | 11428003-A-G | *** | |||||||
13596941-A-G | 11441265-A-G | FGC50948 | *** | ||||||
13606834-C-G | 11451158-C-G | *** | |||||||
13728044-T-A | 11572368-T-A | DYZ17 | *** | ||||||
13728330-G-C | 11572654-G-C | DYZ17 | *** | ||||||
13878288-T-C | 11757582-T-C | *** | |||||||
13923556-A-T | 11802850-A-T | *** | |||||||
14132882-A-T | 12012176-A-T | *** | |||||||
14251490-A-T | 12130784-A-T | *** | |||||||
14532696-T-C | 12420897-T-C | *** | |||||||
14632162-T-C | 12520231-T-C | *** | |||||||
14695988-G-C | 12584054-G-C | *** | |||||||
15102171-T-A | 12990259-T-A | *** | |||||||
15231676-C-T | 13119762-C-T | *** | |||||||
15244529-T-C | 13132615-T-C | *** | |||||||
15889366-T-C | 13777486-T-C | *** | |||||||
15958442-T-A | 13846562-T-A | *** | |||||||
16135492-C-T | 14023612-C-T | P8_Dst | *** | ||||||
16344839-C-T | 14232959-C-T | *** | |||||||
16398338-G-A | 14286458-G-A | *** | |||||||
16500635-A-G | 14388755-A-G | *** | |||||||
16678399-A-T | 14566519-A-T | *** | |||||||
16701083-C-A | 14589203-C-A | *** | |||||||
17338189-T-A | 15226309-T-A | *** | |||||||
17458964-C-G | 15347084-C-G | *** | |||||||
17523618-A-G | 15411738-A-G | *** | |||||||
17724519-A-T | 15612639-A-T | *** | |||||||
18287168-C-T | 16175288-C-T | P6_Prx | *** | ||||||
18288218-C-A | 16176338-C-A | P6_Prx | *** | ||||||
18292370-C-A | 16180490-C-A | P6_Prx | *** | ||||||
18318109-G-T | 16206229-G-T | P6_Prx | *** | ||||||
18345855-G-T | 16233975-G-T | P6_Prx | *** | ||||||
18441863-T-G | 16329983-T-G | P6_Dst | *** | ||||||
18475343-C-A | 16363463-C-A | P6_Dst | *** | ||||||
18475347-T-G | 16363467-T-G | P6_Dst | *** | ||||||
18475352-T-C | 16363472-T-C | P6_Dst | *** | ||||||
18475376-T-C | 16363496-T-C | P6_Dst | *** | ||||||
18475385-A-G | 16363505-A-G | P6_Dst | *** | ||||||
18475403-T-C | 16363523-T-C | P6_Dst | *** | ||||||
18475408-T-C | 16363528-T-C | P6_Dst | *** | ||||||
18475412-G-T | 16363532-G-T | P6_Dst | *** | ||||||
18475415-A-T | 16363535-A-T | P6_Dst | *** | ||||||
18475427-A-G | 16363547-A-G | P6_Dst | *** | ||||||
18475428-G-T | 16363548-G-T | P6_Dst | *** | ||||||
18475435-T-G | 16363555-T-G | P6_Dst | *** | ||||||
18491375-T-C | 16379495-T-C | P6_Dst | *** | ||||||
18518023-A-G | 16406143-A-G | P6_Dst | *** | ||||||
18519889-A-C | 16408009-A-C | P6_Dst | *** | ||||||
18521036-G-T | 16409156-G-T | P6_Dst | *** | ||||||
18524963-T-G | 16413083-T-G | P6_Dst | *** | ||||||
18524983-A-G | 16413103-A-G | P6_Dst | *** | ||||||
18580098-T-C | 16468218-T-C | *** | |||||||
19000932-T-G | 16889052-T-G | *** | |||||||
19329631-T-A | 17217751-T-A | *** | |||||||
19340017-T-C | 17228137-T-C | *** | |||||||
19437146-G-T | 17325266-G-T | *** | |||||||
19520813-G-A | 17408933-G-A | *** | |||||||
19582829-G-T | 17470949-G-T | P5_Prx | *** | ||||||
19618751-A-G | 17506871-A-G | P5_Prx | *** | ||||||
19643063-C-A | 17531183-C-A | P5_Prx | *** | ||||||
19753437-C-T | 17641557-C-T | P5_Prx | *** | ||||||
19753997-A-C | 17642117-A-C | P5_Prx | *** | ||||||
19758647-C-T | 17646767-C-T | P5_Prx | *** | ||||||
19874132-A-T | 17762252-A-T | P5_Prx | *** | ||||||
19967559-C-A | 17855679-C-A | P5_Prx | *** | ||||||
20047260-A-T | 17935380-A-T | P5_Prx | *** | ||||||
20084563-A-G | 17972683-A-G | P5_Dst | *** | ||||||
20127072-C-G | 18015192-C-G | P5_Dst | *** | ||||||
20142111-G-T | 18030231-G-T | P5_Dst | *** | ||||||
20142113-G-T | 18030233-G-T | P5_Dst | *** | ||||||
20252745-G-A | 18090859-G-A | P5_Dst | *** | ||||||
20252774-G-T | 18090888-G-T | P5_Dst | *** | ||||||
20301842-C-T | 18139956-C-T | P5_Dst | *** | ||||||
20326081-A-T | 18164195-A-T | P5_Dst | *** | ||||||
20326115-C-T | 18164229-C-T | P5_Dst | *** | ||||||
20332095-G-A | 18170209-G-A | P5_Dst | *** | ||||||
20364550-A-T | 18202664-A-T | P5_Dst | *** | ||||||
20426197-C-T | 18264311-C-T | P5_Dst | *** | ||||||
20472578-C-A | 18310692-C-A | P5_Dst | *** | ||||||
20534081-T-A | 18372195-T-A | P5_Dst | 14×A | *** | |||||
20569613-T-A | 18407727-T-A | P5_Dst | *** | ||||||
20596883-T-C | 18434997-T-C | P5_Dst | *** | ||||||
20673826-G-A | 18511940-G-A | P4_Prx | *** | ||||||
20734446-C-A | 18572560-C-A | P4_Prx | *** | ||||||
20756167-T-C | 18594281-T-C | P4_Prx | *** | ||||||
20889112-T-G | 18727226-T-G | P4_Dst | *** | ||||||
20909833-T-A | 18747947-T-A | P4_Dst | *** | ||||||
21068360-G-T | 18906474-G-T | *** | |||||||
21196975-G-A | 19035089-G-A | *** | |||||||
21271952-T-C | 19110066-T-C | *** | |||||||
21386678-G-T | 19224792-G-T | *** | |||||||
21558714-A-T | 19396828-A-T | *** | |||||||
21574749-A-C | 19412863-A-C | *** | |||||||
21635026-C-T | 19473140-C-T | *** | |||||||
21744882-G-A | 19582996-G-A | *** | |||||||
21944898-G-A | 19783012-G-A | *** | |||||||
22166581-C-T | 20004695-C-T | *** | |||||||
22228031-C-A | 20066145-C-A | DYZ19 | *** | ||||||
22234775-T-A | 20072889-T-A | DYZ19 | *** | ||||||
22248431-C-A | 20086545-C-A | DYZ19 | *** | ||||||
22248521-G-C | 20086635-G-C | DYZ19 | *** | ||||||
22283177-G-T | 20121291-G-T | DYZ19 | *** | ||||||
22283209-C-T | 20121323-C-T | DYZ19 | *** | ||||||
22283243-A-G | 20121357-A-G | DYZ19 | *** | ||||||
22313288-A-T | 20151402-A-T | DYZ19 | *** | ||||||
22328302-G-A | 20166416-G-A | DYZ19 | *** | ||||||
22341493-G-A | 20179607-G-A | DYZ19 | *** | ||||||
22346999-A-C | 20185113-A-C | DYZ19 | *** | ||||||
22347034-A-G | 20185148-A-G | DYZ19 | *** | ||||||
22352762-A-T | 20190876-A-T | DYZ19 | *** | ||||||
22353028-C-A | 20191142-C-A | DYZ19 | *** | ||||||
22357721-T-G | 20195835-T-G | DYZ19 | *** | ||||||
22359927-A-G | 20198041-A-G | DYZ19 | *** | ||||||
22361447-A-C | 20199561-A-C | DYZ19 | *** | ||||||
22361448-C-T | 20199562-C-T | DYZ19 | *** | ||||||
22361454-A-G | 20199568-A-G | DYZ19 | *** | ||||||
22361476-G-A | 20199590-G-A | DYZ19 | *** | ||||||
22361481-A-G | 20199595-A-G | DYZ19 | *** | ||||||
22366143-T-A | 20204257-T-A | DYZ19 | *** | ||||||
22366146-G-C | 20204260-G-C | DYZ19 | *** | ||||||
22366610-T-A | 20204724-T-A | DYZ19 | *** | ||||||
22481024-A-C | 20319138-A-C | DYZ19 | *** | ||||||
22481126-A-C | 20319240-A-C | DYZ19 | *** | ||||||
22481135-A-T | 20319249-A-T | DYZ19 | *** | ||||||
22499052-T-G | 20337166-T-G | DYZ19 | *** | ||||||
22502944-A-T | 20341058-A-T | DYZ19 | *** | ||||||
22502969-C-T | 20341083-C-T | DYZ19 | *** | ||||||
22502971-T-C | 20341085-T-C | DYZ19 | *** | ||||||
22502986-A-G | 20341100-A-G | DYZ19 | *** | ||||||
22644465-C-G | 20482579-C-G | *** | |||||||
22668547-T-C | 20506661-T-C | *** | |||||||
22779549-G-T | 20617663-G-T | *** | |||||||
22982116-A-T | 20820230-A-T | *** | |||||||
23325327-A-C | 21163441-A-C | *** | |||||||
23516981-C-G | 21355095-C-G | *** | |||||||
23696608-G-A | 21534722-G-A | *** | |||||||
24044473-A-T | 21898326-A-T | *** | |||||||
24183028-C-A | 22036881-C-A | P3_b1 | *** | ||||||
24218493-C-T | 22072346-C-T | P3_b1 | *** | ||||||
24243162-G-T | 22097015-G-T | P3_b1 | *** | ||||||
24326842-T-C | 22180695-T-C | P3_t1 | *** | ||||||
24373699-C-G | 22227552-C-G | *** | |||||||
24536719-G-A | 22390572-G-A | P3_t2 | *** | ||||||
24537185-T-C | 22391038-T-C | P3_t2 | *** | ||||||
24579722-T-A | 22433575-T-A | P3_t2 | *** | ||||||
24614399-C-A | 22468252-C-A | P3_t2 | *** | ||||||
24660074-G-T | 22513927-G-T | P3_b2 | *** | ||||||
24768680-C-A | 22622533-C-A | P3_b2 | *** | ||||||
24931461-G-C | 22785314-G-C | g1 | *** | ||||||
24991923-T-C | 22845776-T-C | g1 | *** | ||||||
24992185-T-G | 22846038-T-G | g1 | *** | ||||||
24995953-C-T | 22849806-C-T | g1 | *** | ||||||
25176203-C-T | 23030056-C-T | g1 | *** | ||||||
25246623-A-C | 23100476-A-C | P2_r1 | *** | ||||||
25309272-C-T | 23163125-C-T | P2_r1 | *** | ||||||
25356253-A-G | 23210106-A-G | P2_r2 | *** | ||||||
25422107-G-A | 23275960-G-A | P2_r2 | *** | ||||||
25422116-G-A | 23275969-G-A | P2_r2 | *** | ||||||
25422143-C-T | 23275996-C-T | P2_r2 | *** | ||||||
25466221-T-G | 23320074-T-G | P2_r2 | *** | ||||||
25625078-G-A | 23478931-G-A | P1_b3 | *** | ||||||
25628569-C-T | 23482422-C-T | P1_b3 | *** | ||||||
25628817-C-T | 23482670-C-T | P1_b3 | *** | ||||||
25717387-G-T | 23571240-G-T | P1_b3 | *** | ||||||
25717430-T-A | 23571283-T-A | P1_b3 | *** | ||||||
25841094-A-C | 23694947-A-C | P1_b3 | *** | ||||||
25942487-A-T | 23796340-A-T | P1_Y1 | *** | ||||||
25944983-A-C | 23798836-A-C | P1_Y1 | *** | ||||||
25955365-C-T | 23809218-C-T | P1_Y1 | *** | ||||||
25957645-G-T | 23811498-G-T | P1_Y1 | *** | ||||||
25981200-G-A | 23835053-G-A | P1_Y1 | *** | ||||||
25996961-G-A | 23850814-G-A | P1_Y1 | *** | ||||||
26121700-C-T | 23975553-C-T | P1_Y1 | *** | ||||||
26149051-A-T | 24002904-A-T | P1_Y1 | *** | ||||||
26169906-C-A | 24023759-C-A | P1_Y1 | *** | ||||||
26261783-A-T | 24115636-A-T | P1_Y1 | *** | ||||||
26291853-G-T | 24145706-G-T | P1_Y1 | *** | ||||||
26309026-A-T | 24162879-A-T | P1_Y1 | *** | ||||||
26310724-G-T | 24164577-G-T | P1_Y1 | *** | ||||||
26311070-A-T | 24164923-A-T | P1_Y1 | *** | ||||||
26346470-C-A | 24200323-C-A | P1_Y1 | *** | ||||||
26369318-C-G | 24223171-C-G | P1_Y1 | *** | ||||||
26376367-T-G | 24230220-T-G | P1_Y1 | *** | ||||||
26376466-T-C | 24230319-T-C | P1_Y1 | *** | ||||||
26438447-A-G | 24292300-A-G | P1_Y1 | *** | ||||||
26564146-G-T | 24417999-G-T | P1_g2 | *** | ||||||
26616706-G-T | 24470559-G-T | P1_g2 | *** | ||||||
26658677-C-T | 24512530-C-T | P1_g2 | *** | ||||||
26687061-A-G | 24540914-A-G | P1_g2 | *** | ||||||
26834020-C-T | 24687873-C-T | P1_g2 | *** | ||||||
26906666-T-A | 24760519-T-A | P1_r3 | *** | ||||||
26991332-G-A | 24845185-G-A | P1_r4 | *** | ||||||
27022746-A-T | 24876599-A-T | P1_r4 | *** | ||||||
27077274-A-T | 24931127-A-T | P1_r4 | *** | ||||||
27131921-G-C | 24985774-G-C | P1_g3 | *** | ||||||
27161621-T-A | 25015474-T-A | P1_g3 | *** | ||||||
27161897-C-A | 25015750-C-A | P1_g3 | *** | ||||||
27161947-T-A | 25015800-T-A | P1_g3 | *** | ||||||
27259559-T-A | 25113412-T-A | P1_g3 | *** | ||||||
27262622-A-C | 25116475-A-C | P1_g3 | *** | ||||||
27302584-C-T | 25156437-C-T | P1_g3 | *** | ||||||
27304455-T-A | 25158308-T-A | P1_g3 | *** | ||||||
27317998-A-T | 25171851-A-T | P1_g3 | *** | ||||||
27332582-G-A | 25186435-G-A | P1_g3 | *** | ||||||
27430134-T-G | 25283987-T-G | P1_g3 | *** | ||||||
27454800-C-T | 25308653-C-T | P1_Y2 | *** | ||||||
27499244-T-G | 25353097-T-G | P1_Y2 | *** | ||||||
27546170-A-G | 25400023-A-G | P1_Y2 | *** | ||||||
27734457-A-C | 25588310-A-C | P1_Y2 | *** | ||||||
27783563-G-T | 25637416-G-T | P1_Y2 | *** | ||||||
27792195-T-A | 25646048-T-A | P1_Y2 | *** | ||||||
27792239-T-G | 25646092-T-G | P1_Y2 | *** | ||||||
27822659-C-T | 25676512-C-T | P1_Y2 | *** | ||||||
27842924-C-T | 25696777-C-T | P1_Y2 | *** | ||||||
27848665-G-A | 25702518-G-A | P1_Y2 | *** | ||||||
27916311-C-A | 25770164-C-A | P1_Y2 | *** | ||||||
27964444-C-T | 25818297-C-T | P1_Y2 | *** | ||||||
28021940-G-T | 25875793-G-T | P1_Y2 | *** | ||||||
28033274-A-G | 25887127-A-G | P1_Y2 | *** | ||||||
28081259-C-A | 25935112-C-A | P1_Y2 | *** | ||||||
28091051-T-G | 25944904-T-G | P1_Y2 | *** | ||||||
28122986-C-T | 25976839-C-T | P1_b4 | *** | ||||||
28136815-T-A | 25990668-T-A | P1_b4 | *** | ||||||
28137074-G-T | 25990927-G-T | P1_b4 | *** | ||||||
28207372-T-C | 26061225-T-C | P1_b4 | *** | ||||||
28356225-G-T | 26210078-G-T | P1_gr2 | *** | ||||||
28438130-C-G | 26291983-C-G | P1_gr2 | *** | ||||||
28442662-G-T | 26296515-G-T | P1_gr2 | *** | ||||||
28451734-A-T | 26305587-A-T | P1_gr2 | *** | ||||||
28675924-G-T | 26529777-G-T | *** | |||||||
28766314-T-A | 26620167-T-A | *** | |||||||
58831183-C-A | 56759688-G-T | *** | |||||||
58835057-A-C | 56755814-T-G | *** | |||||||
58835199-T-G | 56755672-A-C | *** | |||||||
58839189-T-C | 56751682-A-G | *** | |||||||
58840817-A-G | 56750054-T-C | *** | |||||||
58845001-C-T | 56745870-G-A | *** | |||||||
58854790-T-C | 56736081-A-G | *** | |||||||
58854799-A-G | 56736072-T-C | *** | |||||||
58858760-A-T | 56732111-T-A | *** | |||||||
58858781-C-T | 56732090-G-A | *** | |||||||
58860330-G-T | 56730541-C-A | *** | |||||||
58860362-A-T | 56730509-T-A | *** | |||||||
58875723-T-C | 56715148-A-G | *** | |||||||
58875864-C-T | 56715007-G-A | *** | |||||||
58881391-C-A | 56709480-G-T | *** | |||||||
58887282-G-T | 56703589-C-A | *** | |||||||
58903455-C-T | 56687416-G-A | *** | |||||||
58912864-A-T | 56678007-T-A | *** | |||||||
58979841-A-C | 56833694-A-C | *** | |||||||
22997012-T-ATATA | 20835126-T-ATATA | *** | |||||||
22189232-AAC-A | 20027346-AAC-A | *** | |||||||
17466767-GGA-G | 15354887-GGA-G | *** | |||||||
22358786-GT-TC | 20196900-GT-TC | DYZ19 | *** | ||||||
3641036-C-CCTTTCCTTTT | 3772995-C-CCTTTCCTTTT | *** | |||||||
4887611-TCAAAA-T | 5019570-TCAAAA-T | *** | |||||||
5806936-TA-T | 5938895-TA-T | *** | |||||||
7275188-TAAAAAAA-T | 7407147-TAAAAAAA-T | 20×A | *** | ||||||
7532276-GTATATATATATATATATATATATATATATA-G | 7664235-GTATATATATATATATATATATATATATATA-G | 28×TA | *** | ||||||
8125024-G-GAAAA | 8256983-G-GAAAA | *** | |||||||
8125044-G-GAAAA | 8257003-G-GAAAA | *** | |||||||
10013177-CGG-TGT | 10175568-CGG-TGT | *** | |||||||
13460958-CG-AT | 11305282-CG-AT | *** | |||||||
13460980-TCG-GCA | 11305304-TCG-GCA | *** | |||||||
13460993-GTAGGC-CTAGTT | 11305317-GTAGGC-CTAGTT | *** | |||||||
13461146-AAAGA-CAAGG | 11305470-AAAGA-CAAGG | *** | |||||||
13461160-CC-AG | 11305484-CC-AG | *** | |||||||
13462741-AAAC-TAAT | 11307065-AAAC-TAAT | *** | |||||||
13489129-CTC-ATT | 11333453-CTC-ATT | *** | |||||||
13726590-T-AATGGA | 11570914-T-AATGGA | DYZ17 | *** | ||||||
13737573-CAATGGAATGGAGT-GAGTGGAATGGAGC | 11581897-CAATGGAATGGAGT-GAGTGGAATGGAGC | DYZ17 | *** | ||||||
14698457-TCAAAAA-T | 12586523-TCAAAAA-T | *** | |||||||
15293538-TGAT-CAAC | 13181637-TGAT-CAAC | *** | |||||||
17441215-TAC-T | 15329335-TAC-T | *** | |||||||
18230333-ATTAT-GTTAA | 16118453-ATTAT-GTTAA | *** | |||||||
18475343-CATAT-AATAG | 16363463-CATAT-AATAG | P6_Dst | *** | ||||||
18475408-TAAAGAGA-CAAATAGT | 16363528-TAAAGAGA-CAAATAGT | P6_Dst | *** | ||||||
18475427-AG-GT | 16363547-AG-GT | P6_Dst | *** | ||||||
18767670-GT-G | 16655790-GT-G | 8×T | *** | ||||||
22234774-AT-CA | 20072888-AT-CA | DYZ19 | *** | ||||||
22241265-AA-TG | 20079379-AA-TG | DYZ19 | *** | ||||||
22263664-GTTAC-TTTAA | 20101778-GTTAC-TTTAA | DYZ19 | *** | ||||||
22295751-GATATGT-TATGTGG | 20133865-GATATGT-TATGTGG | DYZ19 | *** | ||||||
22366143-TCAGATGC-ACACATGT | 20204257-TCAGATGC-ACACATGT | DYZ19 | *** | ||||||
22502969-CCT-TCC | 20341083-CCT-TCC | DYZ19 | *** | ||||||
22502986-AGTGTCTT-GGTTTCTG | 20341100-AGTGTCTT-GGTTTCTG | DYZ19 | *** | ||||||
22504964-ATTTT-GTTTG | 20343078-ATTTT-GTTTG | DYZ19 | *** | ||||||
23316028-A-ATTTT | 21154142-A-ATTTT | *** | |||||||
25422146-GTG-TTT | 23275999-GTG-TTT | P2_r2 | *** | ||||||
58821799-GGC-TGT | 56769070-GCC-ACA | *** | |||||||
58843097-GGCG-TGCC | 56747771-CGCC-GGCA | *** | |||||||
58986062-ACACG-TCACT | 56839915-ACACG-TCACT | *** | |||||||
58986545-CTG-TTC | 56840398-CTG-TTC | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Mutation Notes:
Kit | POSITION-REF-ALT (hg19) | POSITION-REF-ALT (hg38) | Note |
---|---|---|---|
Manual | 24199076-A-T | 22052929-A-T | 57A 3C 2G 50T |