Givens
FTDNA: 38804, BigY2: 38804MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 38804 | BigY2 38804 |
---|---|---|---|---|---|---|---|---|---|
18284371-C-T | 16172491-C-T | P6_Prx | *** | A* | |||||
26095257-T-C | 23949110-T-C | P1_Y1 | *** | A* | |||||
28817871-G-A | 26671724-G-A | A* | |||||||
13451201-C-G | 11295525-C-G | A* | |||||||
24223263-C-T | 22077116-C-T | P3_b1 | + | ||||||
13869134-C-T | 11748428-C-T | BY91731 | + | ||||||
6735161-A-G | 6867120-A-G | BY60957 | Y | Y | + | + | |||
14354879-C-A | 12234174-C-A | Y66548 | Y | ** | + | ||||
17411253-G-A | 15299373-G-A | BY114561 | Y | Y | + | + | |||
19516561-G-A | 17404681-G-A | Y75508 | Y | Y | + | + | |||
6720503-C-T | 6852462-C-T | ** | ** | ||||||
18868981-C-A | 16757101-C-A | FGC5033 | FGC5055 | ** | |||||
5548543-C-T | 5680502-C-T | FT114487 | ** | ||||||
13462269-T-C | 11306593-T-C | ** | |||||||
15865598-A-T | 13753718-A-T | ** | |||||||
5715472-A-G | 5847431-A-G | FT3371 | ** | ||||||
13288854-A-T | 11133178-A-T | ** | |||||||
13292953-G-A | 11137277-G-A | ** | |||||||
14760973-C-T | 12649042-C-T | CTS3241 | ** | ** | |||||
15260711-A-T | 13148795-A-T | ** | |||||||
18035698-G-T | 15923818-G-T | ** | |||||||
28654796-T-C | 26508649-T-C | CTS12647 | ** | ||||||
13462279-C-A | 11306603-C-A | ** | |||||||
7567827-G-A | 7699786-G-A | BY65973 | ** | ||||||
11036055-C-T | ** | ||||||||
13895086-C-A | 11774380-C-A | ** | |||||||
6892603-C-A | 7024562-C-A | ** | |||||||
8901991-CTTTTTT-C | 9033950-CTTTTTT-C | 19×T | ** | ||||||
14295237-C-A | 12174531-C-A | ** | |||||||
10011227-G-T | 10173618-G-T | ** | |||||||
6948125-GT-G | 7080084-GT-G | ** | |||||||
18928568-TAC-T | 16816688-TAC-T | ** | |||||||
3165014-GTT-G | 3296973-GTT-G | 13×T | ** | ||||||
16475271-C-A | 14363391-C-A | ** | |||||||
20215946-G-A | 18054060-G-A | P5_Dst | ** | ||||||
20215947-C-T | 18054061-C-T | P5_Dst | ** | ||||||
20215955-C-CATATAT | 18054069-C-CATATAT | P5_Dst | ** | ||||||
14502618-AT-A | 12390823-AT-A | 10×T | ** | ||||||
7299125-C-A | 7431084-C-A | ** | |||||||
17584158-A-G | 15472278-A-G | ** | |||||||
4901583-C-A | 5033542-C-A | ** | |||||||
17821825-GAAAA-G | 15709945-GAAAA-G | 17×A | ** | ||||||
10801413-G-T | ** | ||||||||
10801426-G-T | ** | ||||||||
10801427-A-C | ** | ||||||||
10801447-C-T | ** | ||||||||
10801448-A-G | ** | ||||||||
10801456-C-G | ** | ||||||||
10801458-G-C | ** | ||||||||
10801461-T-C | ** | ||||||||
10801462-G-C | ** | ||||||||
10801463-G-A | ** | ||||||||
3990643-T-G | 4122602-T-G | ** | |||||||
22592112-C-A | 20430226-C-A | ** | |||||||
16021282-C-A | 13909402-C-A | ** | |||||||
10769039-G-T | ** | ||||||||
11036107-T-A | ** | ||||||||
11036118-T-A | ** | ||||||||
10898525-C-A | FT435857 | ** | |||||||
10801417-C-CCTGCCACACA | ** | ||||||||
17158999-C-G | 15047119-C-G | ** | |||||||
8723712-C-A | 8855671-C-A | Y47790 | ** | ||||||
25990664-C-T | 23844517-C-T | P1_Y1 | ** | ||||||
3627756-GAAGA-G | 3759715-GAAGA-G | 4×AAGA | ** | ||||||
10691020-C-A | ** | ||||||||
21713513-C-A | 19551627-C-A | ** | |||||||
9859192-CAAAA-C | 10021583-CAAAA-C | 17×A | ** | ||||||
10989109-C-A | ** | ||||||||
14253254-CAAAA-C | 12132548-CAAAA-C | 14×A | ** | ||||||
10840046-C-T | ** | ||||||||
28811872-C-A | 26665725-C-A | ** | |||||||
2665740-C-A | 2797699-C-A | ** | |||||||
13226480-C-A | 11070804-C-A | ** | |||||||
56847575-C-T | ** | ||||||||
10947800-T-C | ** | ||||||||
8666748-TG-T | 8798707-TG-T | ** | |||||||
28812253-A-T | 26666106-A-T | ** | |||||||
10801473-A-C | ** | ||||||||
10918344-G-T | ** | ||||||||
10989159-T-C | ** | ||||||||
11032417-CCACT-C | ** | ||||||||
22722369-T-G | 20560483-T-G | ** | |||||||
23801730-T-A | 21639844-T-A | ** | |||||||
10801478-G-T | ** | ||||||||
10801497-C-G | ** | ||||||||
10801501-C-A | ** | ||||||||
10801507-C-T | ** | ||||||||
16968225-C-A | 14856345-C-A | ** | |||||||
3848518-C-A | 3980477-C-A | ** | |||||||
13940982-C-A | 11820276-C-A | ** | |||||||
15410632-T-A | 13298752-T-A | ** | |||||||
6978372-C-A | 7110331-C-A | ** | |||||||
19059842-A-T | 16947962-A-T | ** | |||||||
21208971-AGAGC-A | 19047085-AGAGC-A | ** | |||||||
7252392-C-CA | 7384351-C-CA | ** | |||||||
8403271-GCAA-G | 8535230-GCAA-G | ** | |||||||
17916030-C-A | 15804150-C-A | ** | |||||||
15178942-T-A | 13067028-T-A | ** | |||||||
2793102-C-A | 2925061-C-A | ** | |||||||
9181024-C-T | 9343415-C-T | ** | |||||||
24407242-G-A | 22261095-G-A | ** | |||||||
10692166-C-A | ** | ||||||||
3545912-C-A | 3677871-C-A | ** | |||||||
20626066-A-AG | 18464180-A-AG | P4_Prx | ** | ||||||
28510414-C-A | 26364267-C-A | ** | |||||||
10947877-A-T | ** | ||||||||
10947885-C-T | ** | ||||||||
16988763-C-A | 14876883-C-A | ** | |||||||
16344458-GCTTCTT-G | 14232578-GCTTCTT-G | 12×CTT | ** | ||||||
14880241-ATTTT-A | 12768311-ATTTT-A | 17×T | ** | ||||||
10989062-AG-A | ** | ||||||||
8481808-C-CTT | 8613767-C-CTT | 11×T | ** | ||||||
14742140-G-T | 12630208-G-T | ** | |||||||
21118574-C-A | 18956688-C-A | A17896 | ** | ||||||
15140903-CTT-C | 13028990-CTT-C | 11×T | ** | ||||||
2817201-C-A | 2949160-C-A | ** | |||||||
15770363-C-A | 13658483-C-A | ** | |||||||
28812217-G-A | 26666070-G-A | ** | |||||||
28812202-T-G | 26666055-T-G | ** | |||||||
3610231-C-A | 3742190-C-A | ** | |||||||
7201940-C-A | 7333899-C-A | ** | |||||||
15171388-C-A | 13059474-C-A | ** | |||||||
20215953-T-C | 18054067-T-C | P5_Dst | ** | ||||||
24167261-G-T | 22021114-G-T | P3_b1 | ** | ||||||
2842981-G-T | 2974940-G-T | ** | |||||||
2909248-AAAG-A | 3041207-AAAG-A | ** | |||||||
2948496-A-G | 3080455-A-G | ** | |||||||
2950296-G-T | 3082255-G-T | ** | |||||||
3025050-C-A | 3157009-C-A | ** | |||||||
3048149-A-G | 3180108-A-G | ** | |||||||
3072124-T-C | 3204083-T-C | ** | |||||||
3079480-C-A | 3211439-C-A | ** | |||||||
3089734-C-T | 3221693-C-T | ** | |||||||
3111199-C-A | 3243158-C-A | ** | |||||||
3146674-T-A | 3278633-T-A | ** | |||||||
3156543-C-T | 3288502-C-T | ** | |||||||
3207731-A-G | 3339690-A-G | ** | |||||||
3279035-C-A | 3410994-C-A | ** | |||||||
3321236-G-T | 3453195-G-T | ** | |||||||
3341276-C-A | 3473235-C-A | ** | |||||||
3344004-A-G | 3475963-A-G | ** | |||||||
3344047-C-A | 3476006-C-A | ** | |||||||
3346934-A-C | 3478893-A-C | ** | |||||||
3495754-C-A | 3627713-C-A | ** | |||||||
3548827-C-A | 3680786-C-A | ** | |||||||
3640817-C-T | 3772776-C-T | ** | |||||||
3832080-G-A | 3964039-G-A | ** | |||||||
3884538-G-T | 4016497-G-T | ** | |||||||
3980645-C-A | 4112604-C-A | ** | |||||||
3998341-G-A | 4130300-G-A | ** | |||||||
4169150-C-A | 4301109-C-A | ** | |||||||
4175077-C-A | 4307036-C-A | ** | |||||||
4226301-G-T | 4358260-G-T | ** | |||||||
4226316-G-C | 4358275-G-C | ** | |||||||
4287432-C-A | 4419391-C-A | ** | |||||||
4328927-G-T | 4460886-G-T | ** | |||||||
4414734-A-G | 4546693-A-G | ** | |||||||
4497077-G-T | 4629036-G-T | ** | |||||||
4509349-C-A | 4641308-C-A | ** | |||||||
4525254-A-G | 4657213-A-G | ** | |||||||
4779388-C-A | 4911347-C-A | FT78229 | ** | ||||||
4951484-C-A | 5083443-C-A | ** | |||||||
4957136-C-A | 5089095-C-A | ** | |||||||
4988716-T-C | 5120675-T-C | ** | |||||||
5012808-T-A | 5144767-T-A | FT307369 | ** | ||||||
5012965-G-T | 5144924-G-T | ** | |||||||
5110033-G-T | 5241992-G-T | ** | |||||||
5155492-C-A | 5287451-C-A | ** | |||||||
5193374-G-T | 5325333-G-T | ** | |||||||
5409946-C-A | 5541905-C-A | ** | |||||||
5412639-C-A | 5544598-C-A | ** | |||||||
5552313-C-A | 5684272-C-A | ** | |||||||
5621262-G-T | 5753221-G-T | ** | |||||||
5968692-C-T | 6100651-C-T | ** | |||||||
5987272-C-A | 6119231-C-A | ** | |||||||
5987351-C-A | 6119310-C-A | ** | |||||||
5990317-T-A | 6122276-T-A | ** | |||||||
6043291-C-A | 6175250-C-A | ** | |||||||
6213901-C-A | 6345860-C-A | IR3_Dst | ** | ||||||
6252867-A-G | 6384826-A-G | IR3_Dst | ** | ||||||
6277748-TAC-T | 6409707-TAC-T | IR3_Dst | ** | ||||||
6460991-C-A | 6592950-C-A | ** | |||||||
6535042-G-T | 6667001-G-T | ** | |||||||
6578148-T-C | 6710107-T-C | ** | |||||||
6593422-T-C | 6725381-T-C | ** | |||||||
6602817-A-G | 6734776-A-G | ** | |||||||
6784541-C-A | 6916500-C-A | ** | |||||||
6874574-C-A | 7006533-C-A | ** | |||||||
6892547-C-CT | 7024506-C-CT | ** | |||||||
6892609-C-A | 7024568-C-A | ** | |||||||
6901060-G-T | 7033019-G-T | ** | |||||||
6929558-C-A | 7061517-C-A | ** | |||||||
6944938-C-A | 7076897-C-A | ** | |||||||
6957658-C-A | 7089617-C-A | ** | |||||||
7009204-TTTG-T | 7141163-TTTG-T | ** | |||||||
7076655-T-C | 7208614-T-C | ** | |||||||
7076657-A-G | 7208616-A-G | ** | |||||||
7081248-C-A | 7213207-C-A | ** | |||||||
7110578-A-T | 7242537-A-T | ** | |||||||
7127303-C-A | 7259262-C-A | ** | |||||||
7127741-G-T | 7259700-G-T | ** | |||||||
7131920-C-A | 7263879-C-A | ** | |||||||
7139202-C-A | 7271161-C-A | ** | |||||||
7162985-C-A | 7294944-C-A | ** | |||||||
7169993-C-A | 7301952-C-A | ** | |||||||
7181904-C-A | 7313863-C-A | ** | |||||||
7253758-A-G | 7385717-A-G | ** | |||||||
7255189-C-A | 7387148-C-A | ** | |||||||
7374334-GC-G | 7506293-GC-G | ** | |||||||
7437403-C-A | 7569362-C-A | ** | |||||||
7437470-C-A | 7569429-C-A | ** | |||||||
7567879-C-A | 7699838-C-A | ** | |||||||
7615448-T-C | 7747407-T-C | ** | |||||||
7699291-C-A | 7831250-C-A | ** | |||||||
7764572-AG-A | 7896531-AG-A | ** | |||||||
8008131-C-A | 8140090-C-A | ** | |||||||
8379414-G-T | 8511373-G-T | FGC64052 | ** | ||||||
8699098-G-T | 8831057-G-T | ** | |||||||
8699102-G-T | 8831061-G-T | ** | |||||||
8974509-G-T | 9136900-G-T | FGC65489 | ** | ||||||
9078797-G-T | 9241188-G-T | ** | |||||||
9139941-C-T | 9302332-C-T | ** | |||||||
9414477-C-T | 9576868-C-T | ** | |||||||
9428179-G-T | 9590570-G-T | ** | |||||||
9474638-G-T | 9637029-G-T | ** | |||||||
9583260-C-A | 9745651-C-A | IR3_Prx | ** | ||||||
9843184-CAAA-C | 10005575-CAAA-C | 15×A | ** | ||||||
9957991-T-C | 10120382-T-C | ** | |||||||
9979155-G-A | 10141546-G-A | ** | |||||||
9996451-T-A | 10158842-T-A | ** | |||||||
9997897-G-A | 10160288-G-A | ** | |||||||
10002715-T-G | 10165106-T-G | ** | |||||||
10040696-G-A | 10203087-G-A | ** | |||||||
10652069-CTCCATTCCATTCCAT-C | ** | ||||||||
10655445-C-A | ** | ||||||||
10663679-TTC-G | ** | ||||||||
10663682-CATT-C | ** | ||||||||
10663744-T-C | ** | ||||||||
10668627-A-G | ** | ||||||||
10671200-G-A | ** | ||||||||
10692171-A-C | ** | ||||||||
10744918-C-T | ** | ||||||||
10746739-A-T | ** | ||||||||
10755094-C-A | ** | ||||||||
10766246-C-A | FT219270 | ** | |||||||
10772219-T-C | ** | ||||||||
10775331-C-A | ** | ||||||||
10780211-C-T | ** | ||||||||
10780867-CTTCA-C | ** | ||||||||
10794491-C-CT | ** | ||||||||
10798311-AATTCCATTCCATTCCATTCCATTCCATTCCATTCC-A | ** | ||||||||
10805612-G-T | ** | ||||||||
10805782-A-G | ** | ||||||||
10818596-C-A | ** | ||||||||
10822047-C-A | ** | ||||||||
10824491-C-A | ** | ||||||||
10826280-C-G | ** | ||||||||
10827811-G-T | ** | ||||||||
10828139-G-T | FGC81009 | ** | |||||||
10832085-C-A | ** | ||||||||
10832631-C-A | ** | ||||||||
10839676-C-A | ** | ||||||||
10841227-C-A | ** | ||||||||
10861175-C-A | ** | ||||||||
10861513-C-G | ** | ||||||||
10868588-C-A | ** | ||||||||
10877815-C-CTTCAG | ** | ||||||||
10879649-G-T | ** | ||||||||
10881849-C-A | ** | ||||||||
10881854-C-A | FT435362 | ** | |||||||
10883949-C-A | ** | ||||||||
10883954-C-A | ** | ||||||||
10884075-T-A | ** | ||||||||
10886778-C-A | ** | ||||||||
10892738-CACATTATATTGCAT-C | ** | ||||||||
10900266-C-A | ** | ||||||||
10910336-C-G | ** | ||||||||
10919269-G-T | ** | ||||||||
10932001-A-G | FT437049 | ** | |||||||
10934401-C-T | ** | ||||||||
10935874-C-A | ** | ||||||||
10938965-C-A | ** | ||||||||
10945910-A-G | FT437690 | ** | |||||||
10947793-T-C | ** | ||||||||
10947887-T-A | ** | ||||||||
10954900-G-T | ** | ||||||||
10960098-A-C | ** | ||||||||
10964423-C-A | ** | ||||||||
10969969-C-T | ** | ||||||||
10971485-T-A | ** | ||||||||
10972309-C-A | ** | ||||||||
10974106-C-A | ** | ||||||||
10974137-C-A | ** | ||||||||
10974448-G-A | ** | ||||||||
10983728-C-A | ** | ||||||||
13226968-C-A | 11071292-C-A | ** | |||||||
13244389-C-T | 11088713-C-T | ** | |||||||
13277532-T-C | 11121856-T-C | ** | |||||||
13306121-C-A | 11150445-C-A | ** | |||||||
13310795-C-A | 11155119-C-A | ** | |||||||
13315246-G-A | 11159570-G-A | ** | |||||||
13320785-A-G | 11165109-A-G | ** | |||||||
13327673-C-A | 11171997-C-A | ** | |||||||
13335910-C-A | 11180234-C-A | ** | |||||||
13338288-G-T | 11182612-G-T | ** | |||||||
13491702-C-A | 11336026-C-A | ** | |||||||
13522088-TGTATTTTTA-T | 11366412-TGTATTTTTA-T | ** | |||||||
13530508-C-T | 11374832-C-T | ** | |||||||
13586066-A-G | 11430390-A-G | ** | |||||||
13593620-A-C | 11437944-A-C | ** | |||||||
13596322-C-T | 11440646-C-T | ** | |||||||
13597453-T-C | 11441777-T-C | ** | |||||||
13614099-C-A | 11458423-C-A | ** | |||||||
13624164-C-A | 11468488-C-A | ** | |||||||
13707398-G-T | 11551722-G-T | ** | |||||||
11650202-G-T | ** | ||||||||
11676671-GGAAAC-G | ** | ||||||||
13872099-G-T | 11751393-G-T | ** | |||||||
13901757-G-T | 11781051-G-T | ** | |||||||
13922675-C-A | 11801969-C-A | ** | |||||||
13940654-C-A | 11819948-C-A | FT300715 | ** | ||||||
13963331-C-A | 11842625-C-A | ** | |||||||
13963903-A-G | 11843197-A-G | ** | |||||||
13963921-A-G | 11843215-A-G | ** | |||||||
13998253-G-T | 11877547-G-T | ** | |||||||
14015093-C-A | 11894387-C-A | ** | |||||||
14030101-T-C | 11909395-T-C | ** | |||||||
14097969-G-GT | 11977263-G-GT | ** | |||||||
14300750-C-A | 12180044-C-A | ** | |||||||
14324634-C-A | 12203928-C-A | ** | |||||||
14390647-A-G | 12269943-A-G | ** | |||||||
14432211-C-A | 12311484-C-A | ** | |||||||
14432337-C-A | 12311610-C-A | ** | |||||||
14445506-A-G | 12324779-A-G | ** | |||||||
14483531-T-C | 12362800-T-C | ** | |||||||
14501161-C-A | 12389366-C-A | ** | |||||||
14505953-T-G | 12394158-T-G | ** | |||||||
14506821-C-A | 12395026-C-A | ** | |||||||
14528404-C-A | 12416605-C-A | ** | |||||||
14568886-G-A | 12457086-G-A | ** | |||||||
14589000-G-T | 12477200-G-T | ** | |||||||
14716348-G-T | 12604415-G-T | ** | |||||||
14823503-A-T | 12711570-A-T | ** | |||||||
14845414-C-A | 12733480-C-A | ** | |||||||
15070595-A-T | 12958686-A-T | ** | |||||||
15103668-C-A | 12991756-C-A | ** | |||||||
15151440-A-T | 13039527-A-T | ** | |||||||
15210869-C-A | 13098955-C-A | ** | |||||||
15221834-C-A | 13109920-C-A | ** | |||||||
15285865-T-C | 13173964-T-C | ** | |||||||
15297242-C-A | 13185341-C-A | ** | |||||||
15334844-T-C | 13222962-T-C | ** | |||||||
15376075-G-A | 13264195-G-A | ** | |||||||
15496950-C-A | 13385070-C-A | ** | |||||||
15576650-C-A | 13464770-C-A | ** | |||||||
15600006-C-A | 13488126-C-A | ** | |||||||
15657125-TA-T | 13545245-TA-T | 8×A | ** | ||||||
15698647-C-A | 13586767-C-A | ** | |||||||
15699865-C-A | 13587985-C-A | ** | |||||||
15742422-C-A | 13630542-C-A | ** | |||||||
15763147-CT-C | 13651267-CT-C | ** | |||||||
15775155-C-A | 13663275-C-A | ** | |||||||
15916443-T-C | 13804563-T-C | ** | |||||||
15922012-G-T | 13810132-G-T | ** | |||||||
15936608-C-A | 13824728-C-A | ** | |||||||
16018888-C-A | 13907008-C-A | ** | |||||||
16034310-G-T | 13922430-G-T | ** | |||||||
16214456-G-T | 14102576-G-T | ** | |||||||
16217959-A-G | 14106079-A-G | ** | |||||||
16351741-G-T | 14239861-G-T | ** | |||||||
16379330-G-T | 14267450-G-T | ** | |||||||
16491484-T-A | 14379604-T-A | ** | |||||||
16602818-C-A | 14490938-C-A | ** | |||||||
16603414-C-T | 14491534-C-T | ** | |||||||
16620405-G-T | 14508525-G-T | ** | |||||||
16662465-C-T | 14550585-C-T | ** | |||||||
16673172-C-A | 14561292-C-A | ** | |||||||
16705072-C-A | 14593192-C-A | ** | |||||||
16707649-C-T | 14595769-C-T | ** | |||||||
16709795-T-C | 14597915-T-C | ** | |||||||
16726287-G-T | 14614407-G-T | ** | |||||||
16816368-G-T | 14704488-G-T | ** | |||||||
16828930-C-T | 14717050-C-T | ** | |||||||
16905869-TCA-T | 14793989-TCA-T | ** | |||||||
17092645-C-A | 14980765-C-A | ** | |||||||
17092792-C-T | 14980912-C-T | ** | |||||||
17128569-C-T | 15016689-C-T | ** | |||||||
17258032-G-T | 15146152-G-T | ** | |||||||
17276228-C-A | 15164348-C-A | ** | |||||||
17317665-G-C | 15205785-G-C | ** | |||||||
17343246-T-C | 15231366-T-C | ** | |||||||
17703282-G-A | 15591402-G-A | 6×GAAA | ** | ||||||
17923789-A-G | 15811909-A-G | ** | |||||||
17997377-G-T | 15885497-G-T | P7_Gap | ** | ||||||
18059635-C-A | 15947755-C-A | ** | |||||||
18135729-G-T | 16023849-G-T | ** | |||||||
18158431-A-G | 16046551-A-G | ** | |||||||
18443423-AT-A | 16331543-AT-A | P6_Dst | ** | ||||||
18702395-G-T | 16590515-G-T | ** | |||||||
18707176-C-A | 16595296-C-A | ** | |||||||
18750049-G-T | 16638169-G-T | ** | |||||||
18753068-G-T | 16641188-G-T | ** | |||||||
18838753-A-G | 16726873-A-G | ** | |||||||
18864656-C-A | 16752776-C-A | ** | |||||||
18874858-T-C | 16762978-T-C | ** | |||||||
18951541-C-A | 16839661-C-A | ** | |||||||
19044365-C-A | 16932485-C-A | ** | |||||||
19130769-TTTG-T | 17018889-TTTG-T | ** | |||||||
19437473-A-C | 17325593-A-C | ** | |||||||
19948287-T-C | 17836407-T-C | P5_Prx | ** | ||||||
21195855-T-A | 19033969-T-A | ** | |||||||
21201712-T-A | 19039826-T-A | ** | |||||||
21283420-C-A | 19121534-C-A | ** | |||||||
21323318-A-G | 19161432-A-G | ** | |||||||
21323322-T-G | 19161436-T-G | ** | |||||||
21362794-T-C | 19200908-T-C | ** | |||||||
21467872-C-A | 19305986-C-A | ** | |||||||
21672177-C-A | 19510291-C-A | ** | |||||||
21678025-C-A | 19516139-C-A | ** | |||||||
21748049-C-A | 19586163-C-A | ** | |||||||
21792809-C-A | 19630923-C-A | ** | |||||||
21834052-T-C | 19672166-T-C | ** | |||||||
21852510-C-T | 19690624-C-T | ** | |||||||
21853661-C-A | 19691775-C-A | ** | |||||||
21863106-A-G | 19701220-A-G | ** | |||||||
22079882-C-A | 19917996-C-A | ** | |||||||
22092860-C-G | 19930974-C-G | ** | |||||||
22101030-C-CT | 19939144-C-CT | ** | |||||||
22188822-CTTGGG-C | 20026936-CTTGGG-C | ** | |||||||
22757614-C-A | 20595728-C-A | ** | |||||||
22884791-G-A | 20722905-G-A | ** | |||||||
23014987-G-A | 20853101-G-A | ** | |||||||
23062305-A-G | 20900419-A-G | ** | |||||||
23193160-C-A | 21031274-C-A | ** | |||||||
23274813-C-T | 21112927-C-T | ** | |||||||
23276630-C-A | 21114744-C-A | ** | |||||||
23276675-G-T | 21114789-G-T | ** | |||||||
23294198-C-A | 21132312-C-A | ** | |||||||
23311363-G-A | 21149477-G-A | ** | |||||||
23340617-G-T | 21178731-G-T | ** | |||||||
23803329-GT-G | 21641443-GT-G | ** | |||||||
23808135-C-A | 21646249-C-A | ** | |||||||
23808761-C-A | 21646875-C-A | ** | |||||||
23838686-C-A | 21676800-C-A | ** | |||||||
24047421-A-G | 21901274-A-G | ** | |||||||
24403411-C-A | 22257264-C-A | ** | |||||||
24513412-C-A | 22367265-C-A | ** | |||||||
25030063-C-A | 22883916-C-A | g1 | ** | ||||||
25532964-T-A | 23386817-T-A | P1_gr1 | ** | ||||||
26730366-C-A | 24584219-C-A | P1_g2 | ** | ||||||
27918647-T-TC | 25772500-T-TC | P1_Y2 | ** | ||||||
27997657-A-G | 25851510-A-G | P1_Y2 | ** | ||||||
28469734-G-T | 26323587-G-T | ** | |||||||
28492875-C-A | 26346728-C-A | ** | |||||||
28529530-C-A | 26383383-C-A | ** | |||||||
28530699-G-C | 26384552-G-C | ** | |||||||
28541275-G-C | 26395128-G-C | ** | |||||||
28581194-T-A | 26435047-T-A | ** | |||||||
28587212-C-A | 26441065-C-A | ** | |||||||
28587943-C-A | 26441796-C-A | ** | |||||||
28700954-T-C | 26554807-T-C | ** | |||||||
28734687-T-C | 26588540-T-C | ** | |||||||
28774472-C-A | 26628325-C-A | ** | |||||||
28776178-G-A | 26630031-G-A | ** | |||||||
28780334-C-A | 26634187-C-A | ** | |||||||
28802804-G-T | 26656657-G-T | ** | |||||||
28812181-A-G | 26666034-A-G | ** | |||||||
28812192-A-C | 26666045-A-C | ** | |||||||
28812197-G-T | 26666050-G-T | ** | |||||||
28812213-T-G | 26666066-T-G | ** | |||||||
28812218-TGC-T | 26666071-TGC-T | ** | |||||||
28812238-T-A | 26666091-T-A | ** | |||||||
28812244-A-G | 26666097-A-G | ** | |||||||
28812282-A-G | 26666135-A-G | ** | |||||||
56839191-G-C | ** | ||||||||
56843408-C-A | ** | ||||||||
35833-C-A | ** | ||||||||
35838-C-T | ** | ||||||||
58841099-C-T | 56749772-G-A | *** | |||||||
20000745-AT-A | 17888865-AT-A | P5_Prx | 11×T | *** | |||||
9295934-C-A | 9458325-C-A | *** | |||||||
20723141-G-GT | 18561255-G-GT | P4_Prx | 12×T | *** | |||||
17307191-T-TATTGC | 15195311-T-TATTGC | 12×ATTGC | *** | ||||||
3535987-C-CAT | 3667946-C-CAT | *** | |||||||
28802561-A-G | 26656414-A-G | *** | |||||||
13482544-G-GC | 11326868-G-GC | *** | |||||||
10020420-C-A | 10182811-C-A | *** | |||||||
25054112-A-C | 22907965-A-C | g1 | *** | ||||||
9955152-G-GTTTT | 10117543-G-GTTTT | *** | |||||||
22185855-CTTTTT-C | 20023969-CTTTTT-C | 25×T | *** | ||||||
13470414-C-A | 11314738-C-A | *** | |||||||
16505918-TAA-T | 14394038-TAA-T | 12×A | *** | ||||||
10690835-C-A | *** | ||||||||
10677743-C-CACTCT | *** | ||||||||
13504839-C-A | 11349163-C-A | *** | |||||||
13461019-A-T | 11305343-A-T | *** | |||||||
15235310-CT-C,CTT | 13123396-CT-C,CTT | 13×T | *** | ||||||
17118990-G-GT | 15007110-G-GT | 9×T | *** | ||||||
16029964-C-A | 13918084-C-A | *** | |||||||
2651303-CAAAA-C | 2783262-CAAAA-C | 16×A | *** | ||||||
8442571-CTT-C,CT | 8574530-CTT-C,CT | 15×T | *** | ||||||
10659507-TATTCCATTCC-T | *** | ||||||||
10663565-C-A | *** | ||||||||
2803658-G-T | 2935617-G-T | S8332 | *** | ||||||
4244622-AT-A,ATT | 4376581-AT-A,ATT | 16×T | *** | ||||||
6434905-C-A | 6566864-C-A | *** | |||||||
7269834-G-T | 7401793-G-T | *** | |||||||
10669500-A-G | *** | ||||||||
10673779-A-G | *** | ||||||||
10748070-G-A | *** | ||||||||
10769841-C-A | *** | ||||||||
10888690-C-A | *** | ||||||||
10970982-C-T | *** | ||||||||
13234969-A-G | 11079293-A-G | *** | |||||||
13311758-C-A | 11156082-C-A | *** | |||||||
13504852-T-C | 11349176-T-C | *** | |||||||
13522220-G-T | 11366544-G-T | *** | |||||||
13613729-A-G | 11458053-A-G | *** | |||||||
11676687-GAATGA-G | *** | ||||||||
14025889-AG-A | 11905183-AG-A | *** | |||||||
14315408-ATTTTT-A,ATTTTTT | 12194702-ATTTTT-A,ATTTTTT | 16×T | *** | ||||||
14717721-T-C | 12605789-T-C | *** | |||||||
15270877-TAA-T,TA | 13158966-TAA-T,TA | 13×A | *** | ||||||
15657063-C-A | 13545183-C-A | *** | |||||||
15670369-C-A | 13558489-C-A | *** | |||||||
15734084-C-T | 13622204-C-T | *** | |||||||
15746705-C-A | 13634825-C-A | Y94649 | *** | ||||||
15873435-T-C | 13761555-T-C | *** | |||||||
18082920-G-GTT | 15971040-G-GTT | 11×T | *** | ||||||
19415851-G-T | 17303971-G-T | *** | |||||||
21163111-C-A | 19001225-C-A | *** | |||||||
21853783-A-G | 19691897-A-G | *** | |||||||
21853811-A-G | 19691925-A-G | *** | |||||||
23415294-A-G | 21253408-A-G | *** | |||||||
56851044-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.