Treacy

FTDNA: B38804, FGC-BigY: LCLU5, YSEQ: 1870, YFull-BigY: YF05204
MDKA Birth: Ireland 1794

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > ZZ10 > Z255/S219 > Z16437 > A557 > A10886 > Z29008 > A10891

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
B38804		FGC-BigY
LCLU5
22689413-T-C 20527527-T-C A10888 YY++
22467096-A-T 20305210-A-T BY221845 DYZ19 *****
10043041-T-A 10205432-T-A **
4063891-G-A 4195850-G-A **
5454428-C-A 5586387-C-A **
5758246-G-T 5890205-G-T **
5990616-G-T 6122575-G-T **
7303773-C-A 7435732-C-A **
7632677-G-A 7764636-G-A **
7632693-C-A 7764652-C-A **
8290950-C-A 8422909-C-A **
9462741-A-C 9625132-A-C A10897 **
13512121-G-T 11356445-G-T **
13539203-C-A 11383527-C-A **
13624833-C-A 11469157-C-A **
13871425-G-T 11750719-G-T **
13999399-T-A 11878693-T-A **
14030217-C-T 11909511-C-T **
15444575-C-A 13332695-C-A **
15645049-A-G 13533169-A-G **
16883542-C-A 14771662-C-A **
17371200-G-T 15259320-G-T **
17517276-C-A 15405396-C-A **
17547587-C-T 15435707-C-T **
17968633-G-T 15856753-G-T **
18864276-G-A 16752396-G-A FT144131 **
18990867-T-C 16878987-T-C **
19062222-C-A 16950342-C-A **
19253192-T-C 17141312-T-C **
21394811-T-A 19232925-T-A A10891BY13599 A10899 **
23120003-C-A 20958117-C-A **
23143492-T-C 20981606-T-C FTA41866 **
23204586-G-T 21042700-G-T **
24383447-C-A 22237300-C-A **
28641646-C-A 26495499-C-A **
27082369-CAGA-C 24936222-CAGA-C P1_r4 5×AGA***
58823417-ATTCCATTGGATTACT-A 56767431-GAATGGAAAGTAATCC-G ***
58873281-G-A 56717590-C-T ***
9950542-G-A 10112933-G-A ZS1361 ***
9950572-G-T 10112963-G-T ***
22367457-T-C 20205571-T-C FGC35522 DYZ19 ***
21482757-C-T 19320871-C-T ***
22367474-T-G 20205588-T-G DYZ19 ***
13740966-ACC-TCG 11585290-ACC-TCG DYZ17 ***
9951939-G-T 10114330-G-T ***
27035479-C-T 24889332-C-T P1_r4 ***
22481631-AG-TA 20319745-AG-TA DYZ19 ***
10043908-G-T 10206299-G-T ***
10064221-T-C 10226612-T-C ***
10064250-T-C 10226641-T-C ***
10064259-T-C 10226650-T-C ***
20653983-C-G 18492097-C-G P4_Prx ***
27016207-A-G 24870060-A-G P1_r4 ***
27546742-C-T 25400595-C-T P1_Y2 19×T***
22297736-TGA-AGT 20135850-TGA-AGT DYZ19 ***
58977110-AA-GT 56830963-AA-GT ***
13740994-TG-AC 11585318-TG-AC DYZ17 ***
22498970-T-C 20337084-T-C DYZ19 ***
7107013-ATA-CTC 7238972-ATA-CTC ***
5818187-T-TAGAG 5950146-T-TAGAG ***
10049211-G-A 10211602-G-A ***
10049261-A-G 10211652-A-G ***
10049281-T-A 10211672-T-A ***
10049308-G-A 10211699-G-A FGC24478 ***
10068114-G-A 10230505-G-A ***
10068130-G-A 10230521-G-A ***
10070777-A-C 10233168-A-C ***
10070789-G-C 10233180-G-C ***
13855185-T-A 11734479-T-A DYZ17 ***
7424424-C-A 7556383-C-A ***
20653977-C-G 18492091-C-G P4_Prx ***
20653986-T-G 18492100-T-G P4_Prx ***
25466457-T-G 23320310-T-G P2_r2 ***
27095971-G-T 24949824-G-T P1_r4 ***
9336652-AC-CT 9499043-AC-CT ***
13446403-CA-TG 11290727-CA-TG ***
13702191-GTG-CTC 11546515-GTG-CTC DYZ17 ***
58974456-AAATCA-TATTCC 56828309-AAATCA-TATTCC ***
22488767-G-C 20326881-G-C DYZ19 ***
9345449-T-G 9507840-T-G ***
22352479-T-C 20190593-T-C DYZ19 ***
26260143-C-G 24113996-C-G P1_Y1 ***
28293276-C-T 26147129-C-T P1_b4 ***
13485669-GAT-TAG 11329993-GAT-TAG ***
58974477-ATTCC-TTGCA 56828330-ATTCC-TTGCA ***
13855157-AAAAG-GAAAT 11734451-AAAAG-GAAAT DYZ17 ***
13858414-GGAT-AGAA 11737708-GGAT-AGAA DYZ17 ***
22311916-T-G 20150030-T-G BY23256 DYZ19 ***
10064169-T-G 10226560-T-G ***
25231924-T-G 23085777-T-G P2_r1 ***
26880358-A-C 24734211-A-C P1_r3 ***
27872517-C-A 25726370-C-A P1_Y2 ***
13846911-TATTTATTCG-AATTGTTTCA 11726205-TATTTATTCG-AATTGTTTCA DYZ17 ***
10068695-A-T 10231086-A-T ***
10068698-T-G 10231089-T-G ***
10068701-C-A 10231092-C-A ***
10066882-T-A 10229273-T-A ***
10066871-T-G 10229262-T-G ***
9345443-T-G 9507834-T-G ***
10066870-A-T 10229261-A-T ***
10066890-T-G 10229281-T-G ***
10066897-C-A 10229288-C-A ***
10066904-A-G 10229295-A-G ***
25446036-A-T 23299889-A-T P2_r2 ***
26376530-T-A 24230383-T-A P1_Y1 ***
26874693-T-G 24728546-T-G P1_r3 ***
26880345-A-C 24734198-A-C P1_r3 ***
13859632-GT-TTTC 11738926-GT-TTTC DYZ17 ***
58988360-TG-CA 56842213-TG-CA ***
9948263-C-T 10110654-C-T ***
10043272-A-T 10205663-A-T ***
10043294-C-T 10205685-C-T ***
10064184-G-A 10226575-G-A ***
10067303-T-A 10229694-T-A F18099 ***
10068075-T-C 10230466-T-C ***
10068204-A-C 10230595-A-C ***
14757667-C-A 12645736-C-A K213 A10896 ***
21061673-G-A 18899787-G-A Y12948 Z12180 ***
9202929-T-G 9365320-T-G ***
58823620-G-A 56767251-C-T ***
22358647-TT-CG 20196761-TT-CG DYZ19 ***
13737570-CTCCAATGGAATGGAG-C 11581894-CTCCAATGGAATGGAG-C DYZ17 ***
13433250-C-T 11277574-C-T ***
9365370-C-G 9527761-C-G ***
14779460-C-A 12667530-C-A ***
22367482-A-C 20205596-A-C DYZ19 ***
58846015-A-G 56744856-T-C ***
58846146-G-A 56744725-C-T ***
9956790-TG-CA 10119181-TG-CA ***
9956804-AG-CA 10119195-AG-CA ***
22361037-GT-TC 20199151-GT-TC DYZ19 ***
9365357-T-G 9527748-T-G ***
22234403-G-A 20072517-G-A DYZ19 ***
22481628-G-A 20319742-G-A DYZ19 ***
26260157-T-G 24114010-T-G P1_Y1 ***
22257704-A-G 20095818-A-G DYZ19 ***
24043797-T-G 21897650-T-G ***
9944603-G-C 10106994-G-C ***
9944691-C-T 10107082-C-T ***
13736427-T-A 11580751-T-A DYZ17 ***
13847019-A-G 11726313-A-G DYZ17 ***
19693572-A-C 17581692-A-C P5_Prx ***
20252715-T-A 18090829-T-A P5_Dst ***
20511033-C-T 18349147-C-T P5_Dst ***
22481609-T-G 20319723-T-G DYZ19 ***
27035460-A-T 24889313-A-T P1_r4 ***
24043830-A-G 21897683-A-G ***
26991278-T-A 24845131-T-A P1_r4 ***
58912757-C-T 56678114-G-A ***
13804057-AAAGGTGTC-TATGGTCTT 11683351-AAAGGTGTC-TATGGTCTT DYZ17 ***
58912846-GAC-TGG 56678023-GTC-CCA ***
58912863-GAG-TAT 56678006-CTC-ATA ***
58972730-TATTCCATTC-CATCCCGTTT 56826583-TATTCCATTC-CATCCCGTTT ***
22492932-G-C 20331046-G-C DYZ19 ***
28819281-G-T 26673134-G-T ***
10067405-AAGT-GTGC 10229796-AAGT-GTGC ***
19721757-ACCGA-CCCGC 17609877-ACCGA-CCCGC P5_Prx ***
27686456-G-A 25540309-G-A P1_Y2 ***
9944583-C-A 10106974-C-A ***
24086441-C-A 21940294-C-A P3_b1 ***
25146289-A-T 23000142-A-T g1 ***
22498964-A-T 20337078-A-T DYZ19 ***
13804186-C-A 11683480-C-A DYZ17 ***
13804188-A-T 11683482-A-T DYZ17 ***
28375668-G-A 26229521-G-A P1_gr2 ***
10042862-C-T 10205253-C-T ***
10042847-C-T 10205238-C-T ***
10042830-C-T 10205221-C-T ***
10067273-A-G 10229664-A-G ***
10067287-CTTGT-ATTGC 10229678-CTTGT-ATTGC ***
10067308-GTGTC-CTGTT 10229699-GTGTC-CTGTT ***
10068103-T-C 10230494-T-C ***
10066870-AT-TG 10229261-AT-TG ***
10068075-TGTTG-CGTTT 10230466-TGTTG-CGTTT ***
22257711-T-C 20095825-T-C ZS5760 DYZ19 ***
13132206-G-A 10621692-G-A ***
13729422-C-G 11573746-C-G DYZ17 ***
22311893-C-G 20150007-C-G DYZ19 ***
13739667-C-G 11583991-C-G DYZ17 ***
25662132-C-T 23515985-C-T P1_b3 ***
58833896-T-C 56756975-A-G ***
10049222-TAATA-GAATG 10211613-TAATA-GAATG ***
22234795-CAAAT-AAAAC 20072909-CAAAT-AAAAC DYZ19 ***
10011723-G-A 10174114-G-A ***
18370990-A-C 16259110-A-C P6_Prx ***
19943706-C-A 17831826-C-A P5_Prx ***
25440115-G-T 23293968-G-T P2_r2 ***
26255055-T-A 24108908-T-A P1_Y1 ***
13860554-CGAATAG-GGAAGGA 11739848-CGAATAG-GGAAGGA DYZ17 ***
13860567-ATGGTC-A 11739861-ATGGTC-A DYZ17 ***
17346138-CTTTC-TTTTT 15234258-CTTTC-TTTTT ***
9302436-C-G 9464827-C-G ***
13529496-CGGAA-TGGAG 11373820-CGGAA-TGGAG ***
13433272-A-G 11277596-A-G ***
10042752-A-C 10205143-A-C ***
9920561-A-G 10082952-A-G ***
10070728-C-T 10233119-C-T ***
10070710-ATCT-TTCC 10233101-ATCT-TTCC ***
20426729-GTTTC-G 18264843-GTTTC-G P5_Dst 4×TTTC***
10049222-T-G 10211613-T-G ***
10042857-T-C 10205248-T-C ***
9920527-G-T 10082918-G-T ***
10049226-A-G 10211617-A-G ***
9476067-A-C 9638458-A-C ***
10064170-G-A 10226561-G-A ***
58829518-G-T 56761353-C-A ***
10049255-T-G 10211646-T-G ***
10042774-A-G 10205165-A-G ***
22236409-T-A 20074523-T-A DYZ19 ***
10064126-A-T 10226517-A-T ***
10064129-T-C 10226520-T-C ***
10049254-C-T 10211645-C-T ***
10049258-A-T 10211649-A-T ***
22257713-A-T 20095827-A-T BY6716 DYZ19 ***
58829474-C-T 56761397-G-A ***
2979327-C-A 3111286-C-A ***
3275993-C-A 3407952-C-A ***
3287167-C-A 3419126-C-A ***
3492663-C-A 3624622-C-A ***
3492665-C-A 3624624-C-A ***
3582121-G-T 3714080-G-T ***
3627852-C-A 3759811-C-A ***
3865256-C-A 3997215-C-A ***
4757240-A-T 4889199-A-T ***
4922302-G-T 5054261-G-T ***
5189199-C-A 5321158-C-A ***
5426434-C-T 5558393-C-T ***
5586148-T-G 5718107-T-G ***
5669412-C-A 5801371-C-A ***
5989722-G-T 6121681-G-T ***
6062654-C-A 6194613-C-A ***
6232063-C-A 6364022-C-A IR3_Dst ***
6233086-T-C 6365045-T-C IR3_Dst ***
6237986-C-A 6369945-C-A IR3_Dst ***
6246903-C-T 6378862-C-T IR3_Dst ***
6355349-G-T 6487308-G-T ***
6694844-T-G 6826803-T-G ***
6763879-A-G 6895838-A-G ***
6778946-C-A 6910905-C-A ***
6832039-T-C 6963998-T-C ***
7039274-A-C 7171233-A-C ***
7045677-C-A 7177636-C-A ***
7132776-C-A 7264735-C-A ***
7274995-C-A 7406954-C-A ***
7307734-C-A 7439693-C-A ***
7333896-T-C 7465855-T-C ***
7371715-C-A 7503674-C-A ***
7414196-T-A 7546155-T-A ***
7414213-G-A 7546172-G-A ***
7629833-G-A 7761792-G-A ***
7649090-C-A 7781049-C-A ***
8159584-T-C 8291543-T-C ***
8181227-G-C 8313186-G-C ***
8181228-C-T 8313187-C-T ***
8408469-T-G 8540428-T-G ***
8661882-C-A 8793841-C-A ***
8712094-C-T 8844053-C-T ***
9216876-G-C 9379267-G-C ***
9220998-A-C 9383389-A-C ***
9237291-T-G 9399682-T-G ***
9293218-A-C 9455609-A-C ***
9302441-A-G 9464832-A-G ***
9336756-G-A 9499147-G-A ***
9343786-A-C 9506177-A-C ***
9528809-A-G 9691200-A-G ***
9566553-G-T 9728944-G-T IR3_Prx ***
9580322-G-C 9742713-G-C IR3_Prx ***
9592635-T-A 9755026-T-A IR3_Prx ***
9619406-T-A 9781797-T-A IR3_Prx ***
9744952-G-T 9907343-G-T ***
9909095-G-A 10071486-G-A ***
9914391-T-A 10076782-T-A ***
9914426-G-C 10076817-G-C ***
9914475-G-A 10076866-G-A ***
9920519-C-T 10082910-C-T ***
9920580-T-C 10082971-T-C ***
9921830-C-T 10084221-C-T ***
9924394-C-T 10086785-C-T ***
9924694-G-A 10087085-G-A ***
9943946-C-A 10106337-C-A ***
9943958-T-C 10106349-T-C ***
9951038-G-A 10113429-G-A FT373402 ***
9951044-C-A 10113435-C-A ***
9956739-A-G 10119130-A-G ***
10011746-G-C 10174137-G-C ***
10042813-T-A 10205204-T-A ***
10042825-A-T 10205216-A-T ***
10043687-C-G 10206078-C-G ***
10043842-C-A 10206233-C-A ***
10043880-A-G 10206271-A-G ***
10049162-T-A 10211553-T-A ***
10064146-C-T 10226537-C-T ***
10064206-A-G 10226597-A-G ***
10066832-C-G 10229223-C-G ***
10066837-A-C 10229228-A-C ***
10066850-T-C 10229241-T-C ***
10068098-T-C 10230489-T-C S13334 ***
10068121-A-G 10230512-A-G ***
10068212-C-A 10230603-C-A ***
10068261-A-C 10230652-A-C ***
10070710-A-T 10233101-A-T ***
10070713-T-C 10233104-T-C ***
10078006-T-C 10240397-T-C ***
10086306-A-T 10248697-A-T ***
13206406-T-C 11050730-T-C ***
13222380-A-G 11066704-A-G ***
13253156-C-T 11097480-C-T ***
13255247-C-A 11099571-C-A ***
13267622-G-T 11111946-G-T ***
13322729-A-G 11167053-A-G ***
13417436-A-C 11261760-A-C ***
13433722-A-C 11278046-A-C ***
13447181-G-A 11291505-G-A ***
13460649-T-A 11304973-T-A ***
13460669-A-T 11304993-A-T ***
13468141-A-G 11312465-A-G ***
13486871-G-C 11331195-G-C ***
13521419-T-G 11365743-T-G ***
13729403-A-T 11573727-A-T DYZ17 ***
13729455-G-A 11573779-G-A DYZ17 ***
13740666-T-A 11584990-T-A DYZ17 ***
13745060-G-T 11589384-G-T DYZ17 ***
13809948-G-C 11689242-G-C DYZ17 ***
13829145-G-T 11708439-G-T DYZ17 ***
13846672-G-C 11725966-G-C DYZ17 ***
13880756-C-A 11760050-C-A ***
14014662-G-T 11893956-G-T ***
14076663-C-A 11955957-C-A ***
14279164-G-A 12158458-G-A ***
14286862-C-A 12166156-C-A ***
14286872-T-A 12166166-T-A ***
14518863-C-A 12407064-C-A ***
14581789-C-A 12469989-C-A ***
14610673-A-T 12498875-A-T ***
14674054-G-T 12562120-G-T ***
14716762-C-A 12604830-C-A ***
14786476-C-A 12674546-C-A ***
14803004-C-A 12691075-C-A ***
15080781-C-A 12968871-C-A ***
15146353-A-G 13034440-A-G ***
15584547-C-T 13472667-C-T ***
15679737-C-A 13567857-C-A ***
15823850-C-A 13711970-C-A ***
15928415-T-C 13816535-T-C ***
16019248-G-T 13907368-G-T ***
16033338-C-A 13921458-C-A ***
16038232-C-A 13926352-C-A ***
16118188-G-A 14006308-G-A P8_Prx ***
16146466-T-A 14034586-T-A P8_Dst ***
16177170-T-A 14065290-T-A FT22502 ***
16240838-C-A 14128958-C-A ***
16270919-C-G 14159039-C-G ***
16292650-C-T 14180770-C-T ***
16319358-A-G 14207478-A-G ***
16413564-C-A 14301684-C-A ***
16679509-G-A 14567629-G-A ***
16725605-G-T 14613725-G-T ***
16738253-C-A 14626373-C-A ***
16745125-G-T 14633245-G-T ***
17030674-C-A 14918794-C-A ***
17122282-C-A 15010402-C-A ***
17318218-C-A 15206338-C-A ***
17349346-T-A 15237466-T-A ***
17374946-C-A 15263066-C-A ***
17382403-C-A 15270523-C-A ***
17402532-C-A 15290652-C-A ***
17428853-T-C 15316973-T-C ***
17512493-C-A 15400613-C-A ***
17540918-G-C 15429038-G-C A10898 ***
17567474-C-T 15455594-C-T ***
17654031-C-A 15542151-C-A ***
17865332-C-A 15753452-C-A ***
17923577-G-A 15811697-G-A ***
17930210-G-T 15818330-G-T ***
17964464-G-T 15852584-G-T ***
18011029-G-T 15899149-G-T P7_Dst ***
18085488-T-C 15973608-T-C ***
18266230-C-T 16154350-C-T ***
18275370-A-G 16163490-A-G P6_Prx ***
18369756-T-C 16257876-T-C P6_Prx ***
18710410-A-G 16598530-A-G ***
18874211-C-A 16762331-C-A ***
18930028-C-A 16818148-C-A ***
19040812-C-A 16928932-C-A ***
19563340-A-G 17451460-A-G ***
19583767-G-A 17471887-G-A P5_Prx ***
19646889-A-C 17535009-A-C P5_Prx ***
19659309-G-T 17547429-G-T P5_Prx ***
19700266-T-A 17588386-T-A P5_Prx ***
19704247-T-G 17592367-T-G P5_Prx ***
19730970-T-A 17619090-T-A P5_Prx ***
19829408-C-T 17717528-C-T P5_Prx ***
20062546-A-T 17950666-A-T P5_Prx ***
20241122-C-T 18079236-C-T P5_Dst ***
20428192-T-G 18266306-T-G P5_Dst ***
20459152-G-T 18297266-G-T P5_Dst ***
20472866-T-C 18310980-T-C P5_Dst ***
20593022-G-A 18431136-G-A P5_Dst ***
20764135-C-T 18602249-C-T P4_Prx ***
20869349-A-G 18707463-A-G P4_Dst ***
20892246-A-C 18730360-A-C P4_Dst ***
21177017-T-A 19015131-T-A ***
21368732-C-T 19206846-C-T ***
21427210-C-A 19265324-C-A ***
21462577-C-G 19300691-C-G ***
21818820-C-A 19656934-C-A ***
21875808-G-A 19713922-G-A ***
21885973-C-A 19724087-C-A ***
22257659-T-A 20095773-T-A DYZ19 ***
22257663-A-G 20095777-A-G DYZ19 ***
22257665-G-T 20095779-G-T BY214512 DYZ19 ***
22257680-A-T 20095794-A-T DYZ19 ***
22257683-T-G 20095797-T-G DYZ19 ***
22257685-G-T 20095799-G-T DYZ19 ***
22257689-T-C 20095803-T-C DYZ19 ***
22257698-T-G 20095812-T-G DYZ19 ***
22257718-G-T 20095832-G-T BY37665 DYZ19 ***
22267589-T-A 20105703-T-A DYZ19 ***
22267632-G-T 20105746-G-T DYZ19 ***
22300892-T-G 20139006-T-G DYZ19 ***
22308461-A-T 20146575-A-T DYZ19 ***
22311848-T-C 20149962-T-C DYZ19 ***
22311851-A-G 20149965-A-G DYZ19 ***
22311852-G-C 20149966-G-C DYZ19 ***
22311876-G-T 20149990-G-T DYZ19 ***
22311885-C-A 20149999-C-A DYZ19 ***
22311886-A-G 20150000-A-G DYZ19 ***
22311887-C-A 20150001-C-A DYZ19 ***
22311900-G-C 20150014-G-C DYZ19 ***
22311906-G-T 20150020-G-T DYZ19 ***
22311907-A-T 20150021-A-T DYZ19 ***
22311910-G-T 20150024-G-T BY19545 DYZ19 ***
22321304-A-T 20159418-A-T DYZ19 ***
22327787-T-G 20165901-T-G DYZ19 ***
22334343-A-T 20172457-A-T DYZ19 ***
22344103-G-A 20182217-G-A DYZ19 ***
22360177-C-G 20198291-C-G DYZ19 ***
22360260-G-C 20198374-G-C DYZ19 ***
22367236-A-C 20205350-A-C DYZ19 ***
22421085-T-A 20259199-T-A DYZ19 ***
22431322-A-C 20269436-A-C DYZ19 ***
22481675-A-G 20319789-A-G DYZ19 ***
22493718-G-T 20331832-G-T DYZ19 ***
22493730-G-A 20331844-G-A DYZ19 ***
22495869-T-C 20333983-T-C DYZ19 ***
22503480-G-T 20341594-G-T DYZ19 ***
22504000-G-T 20342114-G-T DYZ19 ***
22787077-C-A 20625191-C-A ***
22871409-A-G 20709523-A-G ***
22981215-C-A 20819329-C-A ***
23004596-A-G 20842710-A-G ***
23036791-C-A 20874905-C-A ***
23126393-C-A 20964507-C-A ***
23142276-A-T 20980390-A-T ***
23831369-G-C 21669483-G-C ***
24021523-A-C 21875376-A-C ***
24025375-A-G 21879228-A-G ***
24027733-C-A 21881586-C-A ***
24080116-A-G 21933969-A-G P3_b1 ***
24192138-T-A 22045991-T-A P3_b1 ***
24416896-G-T 22270749-G-T ***
24549653-T-C 22403506-T-C P3_t2 ***
24551707-A-C 22405560-A-C P3_t2 ***
24562946-A-C 22416799-A-C P3_t2 ***
24585106-T-G 22438959-T-G P3_t2 ***
24614128-G-A 22467981-G-A P3_t2 ***
24646614-T-G 22500467-T-G P3_b2 ***
24664793-G-T 22518646-G-T P3_b2 ***
24671024-T-C 22524877-T-C P3_b2 ***
24694374-T-C 22548227-T-C P3_b2 ***
24694438-T-C 22548291-T-C P3_b2 ***
24694580-T-G 22548433-T-G P3_b2 ***
24744073-T-C 22597926-T-C P3_b2 ***
24769880-G-T 22623733-G-T P3_b2 ***
24830420-T-A 22684273-T-A P3_b2 ***
24854962-G-T 22708815-G-T IR1_R ***
24859730-T-A 22713583-T-A IR1_R ***
24866924-A-C 22720777-A-C IR1_R ***
24907777-G-T 22761630-G-T g1 ***
24907779-A-T 22761632-A-T g1 ***
24978930-G-T 22832783-G-T g1 ***
25135372-C-T 22989225-C-T g1 ***
25184859-C-T 23038712-C-T g1 ***
25228656-T-A 23082509-T-A P2_r1 ***
25289867-G-T 23143720-G-T P2_r1 ***
25322396-C-A 23176249-C-A P2_r1 ***
25361353-C-T 23215206-C-T P2_r2 ***
25379656-T-C 23233509-T-C P2_r2 ***
25429589-T-G 23283442-T-G P2_r2 ***
25436803-T-C 23290656-T-C P2_r2 ***
25446068-T-G 23299921-T-G P2_r2 ***
25466337-T-A 23320190-T-A P2_r2 ***
25466363-T-A 23320216-T-A P2_r2 ***
25466371-C-A 23320224-C-A P2_r2 ***
25466436-C-A 23320289-C-A P2_r2 ***
25466980-C-A 23320833-C-A P2_r2 ***
25524821-C-T 23378674-C-T P1_gr1 ***
25524824-A-T 23378677-A-T P1_gr1 ***
25537114-G-T 23390967-G-T P1_gr1 ***
25578661-G-A 23432514-G-A P1_gr1 ***
25626782-A-T 23480635-A-T P1_b3 ***
25662142-C-T 23515995-C-T P1_b3 ***
25828105-T-G 23681958-T-G P1_b3 ***
26255048-A-T 24108901-A-T P1_Y1 ***
26255065-T-A 24108918-T-A P1_Y1 ***
26278891-G-T 24132744-G-T P1_Y1 ***
26310803-C-T 24164656-C-T P1_Y1 ***
26317311-C-A 24171164-C-A P1_Y1 ***
26328642-T-C 24182495-T-C P1_Y1 ***
26328670-A-C 24182523-A-C P1_Y1 ***
26341501-C-A 24195354-C-A P1_Y1 ***
26385906-C-A 24239759-C-A P1_Y1 ***
26465267-G-A 24319120-G-A P1_Y1 ***
26541513-C-A 24395366-C-A P1_g2 ***
26561609-C-A 24415462-C-A P1_g2 ***
26859199-A-T 24713052-A-T P1_r3 ***
26879559-G-A 24733412-G-A P1_r3 ***
26880374-A-C 24734227-A-C P1_r3 ***
26880402-G-T 24734255-G-T P1_r3 ***
26984903-G-T 24838756-G-T P1_r4 ***
27056823-T-A 24910676-T-A P1_r4 ***
27121107-G-T 24974960-G-T P1_g3 ***
27121990-G-T 24975843-G-T P1_g3 ***
27162008-A-C 25015861-A-C P1_g3 ***
27168322-T-G 25022175-T-G P1_g3 ***
27255049-C-T 25108902-C-T P1_g3 ***
27271089-G-T 25124942-G-T P1_g3 ***
27320937-C-T 25174790-C-T P1_g3 ***
27338029-G-A 25191882-G-A P1_g3 ***
27497058-C-T 25350911-C-T P1_Y2 ***
27497066-C-T 25350919-C-T P1_Y2 ***
27686449-A-C 25540302-A-C P1_Y2 ***
27686461-G-A 25540314-G-A P1_Y2 14×A***
27714382-G-T 25568235-G-T P1_Y2 ***
27720213-A-T 25574066-A-T P1_Y2 ***
27733463-T-A 25587316-T-A P1_Y2 ***
27733472-T-A 25587325-T-A P1_Y2 ***
27733507-T-A 25587360-T-A P1_Y2 ***
27792200-G-A 25646053-G-A P1_Y2 ***
27872505-G-A 25726358-G-A P1_Y2 ***
27872506-G-A 25726359-G-A P1_Y2 ***
28104027-A-T 25957880-A-T P1_Y2 ***
28225552-A-T 26079405-A-T P1_b4 ***
28225569-C-T 26079422-C-T P1_b4 ***
28225675-A-G 26079528-A-G P1_b4 ***
28293272-T-C 26147125-T-C P1_b4 ***
28506793-C-A 26360646-C-A ***
28732942-G-T 26586795-G-T ***
28767801-C-A 26621654-C-A ***
28798253-A-G 26652106-A-G ***
28798658-G-A 26652511-G-A ***
28819261-G-T 26673114-G-T ***
58819602-C-G 56771269-G-C ***
58821066-A-C 56769805-T-G ***
58827440-G-A 56763431-C-T ***
58827443-C-G 56763428-G-C ***
58829523-C-T 56761348-G-A ***
58829526-T-A 56761345-A-T ***
58829531-T-A 56761340-A-T ***
58844635-C-G 56746236-G-C ***
58987173-C-A 56841026-C-A ***
10042790-GCTTTG-TCTTCA 10205181-GCTTTG-TCTTCA ***
9920577-CACT-TGCC 10082968-CACT-TGCC ***
58994857-CAT-GAC 56848710-CAT-GAC ***
22502503-AG-TA 20340617-AG-TA DYZ19 ***
21598135-G-GA 19436249-G-GA 9×A***
26349675-AAC-A 24203528-AAC-A P1_Y1 14×AC***
10049254-CTTTACTA-TGTTTCTG 10211645-CTTTACTA-TGTTTCTG ***
6226279-C-CTT 6358238-C-CTT IR3_Dst 14×T***
6727436-AA-TGCTG 6859395-AA-TGCTG ***
9914403-AG-GC 10076794-AG-GC ***
9916048-TTC-AT 10078439-TTC-AT ***
9920519-CAAAGAAAG-TAAACAAAT 10082910-CAAAGAAAG-TAAACAAAT ***
9944566-CT-AC 10106957-CT-AC ***
10042818-GT-TA 10205209-GT-TA ***
10043687-CA-GT 10206078-CA-GT ***
10064126-ATAT-TTAC 10226517-ATAT-TTAC ***
10064142-CTTTC-GTTTT 10226533-CTTTC-GTTTT ***
10068268-CT-C 10230659-CT-C ***
10086287-GC-TT 10248678-GC-TT ***
13132137-AACAC-TACAT 10621623-AACAC-TACAT ***
13143656-AC-GT 10633142-AC-GT ***
13339794-AA-CT 11184118-AA-CT ***
13445632-TAGG-GAGA 11289956-TAGG-GAGA ***
13486835-TG-CA 11331159-TG-CA ***
13734783-TTCAAAT-CTGAAAC 11579107-TTCAAAT-CTGAAAC DYZ17 ***
13804122-GA-AT 11683416-GA-AT DYZ17 ***
13804146-CAA-GAT 11683440-CAA-GAT DYZ17 ***
13804154-CA-C 11683448-CA-C DYZ17 ***
13804159-CG-TTC 11683453-CG-TTC DYZ17 ***
13846935-GAATGTAT-AAATGGAA 11726229-GAATGTAT-AAATGGAA DYZ17 ***
13846999-GGAAT-CGAAC 11726293-GGAAT-CGAAC DYZ17 ***
14730396-CAAAAAA-C 12618464-CAAAAAA-C 18×A***
15179030-AAAAA-G 13067116-AAAAA-G ***
15320664-G-GGAAGAAGAAGAAGAAGAAGAA 13208770-G-GGAAGAAGAA 18×GAA***
16146472-AAAAAAG-A 14034592-AAAAAAG-A P8_Dst ***
17047880-ATTTT-A 14936000-ATTTT-A 16×T***
18534461-GT-G 16422581-GT-G P6_Dst ***
19810630-TG-GT 17698750-TG-GT P5_Prx ***
20025443-CTCT-C 17913563-CTCT-C P5_Prx ***
20947419-CA-C 18785533-CA-C P4_Dst ***
22205320-TA-T 20043434-TA-T 9×A***
22267607-AG-GC 20105721-AG-GC DYZ19 ***
22498448-GGTGT-TGTAG 20336562-GGTGT-TGTAG DYZ19 ***
22500841-TG-T 20338955-TG-T DYZ19 ***
24023873-AAAAG-A 21877726-AAAAG-A ***
24605004-CTG-C 22458857-CTG-C P3_t2 ***
24696218-CTT-C 22550071-CTT-C P3_b2 15×T***
24854976-CGAT-TGAC 22708829-CGAT-TGAC IR1_R ***
25165777-CT-C 23019630-CT-C g1 9×T***
25447265-TGGTGGTA-T 23301118-TGGTGGTA-T P2_r2 ***
25490559-CGGG-C 23344412-CGGG-C P2_r2 ***
25727463-CAGG-AAGT 23581316-CAGG-AAGT P1_b3 ***
25781074-GT-G 23634927-GT-G P1_b3 12×T***
26248108-GAAAG-AAAAA 24101961-GAAAG-AAAAA P1_Y1 ***
26276630-GT-G 24130483-GT-G P1_Y1 ***
26310809-A-AT 24164662-A-AT P1_Y1 ***
26537614-AGT-GGG 24391467-AGT-GGG P1_g2 ***
27916377-CTC-ATA 25770230-CTC-ATA P1_Y2 ***
27929119-GT-G 25782972-GT-G P1_Y2 ***
28175350-GAC-G 26029203-GAC-G P1_b4 12×AC***
58982015-CCAC-TCAA 56835868-CCAC-TCAA ***
58985891-CCTACAT-GCCACAG 56839744-CCTACAT-GCCACAG ***
58989352-CTC-GTG 56843205-CTC-GTG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.