Ross
FGC: GNSTN, FTDNA: 59503, YSEQ: 1853MDKA Birth: Ireland
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC GNSTN |
---|---|---|---|---|---|---|---|---|
3895898-G-T | 4027857-G-T | FGC42638 | + | |||||
4657816-C-T | 4789775-C-T | FGC42639 | + | |||||
28080918-G-C | 25934771-G-C | FGC42656 | P1_Y2 | * | ||||
58862765-A-G | 56728106-T-C | ** | ||||||
26204854-T-A | 24058707-T-A | FGC15632 | P1_Y1 | ** | ||||
13466740-C-A | 11311064-C-A | BY85747 | ** | |||||
14121521-G-A | 12000815-G-A | ** | ||||||
14391129-G-T | 12270425-G-T | ** | ||||||
14656131-C-G | 12544196-C-G | ** | ||||||
15278880-T-C | 13166979-T-C | ** | ||||||
15856572-T-C | 13744692-T-C | ** | ||||||
16024252-T-C | 13912372-T-C | ** | ||||||
16322910-G-T | 14211030-G-T | ** | ||||||
16352454-C-A | 14240574-C-A | ** | ||||||
16978862-C-A | 14866982-C-A | ** | ||||||
17025770-G-T | 14913890-G-T | ** | ||||||
18727638-G-T | 16615758-G-T | ** | ||||||
18727668-G-T | 16615788-G-T | FT283229 | ** | |||||
24387386-C-T | 22241239-C-T | FGC71339 | ** | |||||
24387404-A-G | 22241257-A-G | ** | ||||||
58986184-C-G | 56840037-C-G | ** | ||||||
15645178-GTTT-G | 13533298-GTTT-G | ** | ||||||
19319834-G-GTATA | 17207954-G-GTATA | 23×TA | ** | |||||
21421790-GA-G | 19259904-GA-G | ** | ||||||
24387347-CATAT-C | 22241200-CATAT-C | ** | ||||||
22287090-TA-T | 20125204-TA-T | DYZ19 | *** | |||||
15491536-C-CA | 13379656-C-CA | *** | ||||||
13488439-TG-CA | 11332763-TG-CA | *** | ||||||
25200983-GAAGGAAGA-G | 23054836-GAAGGAAGA-G | g1 | *** | |||||
22341971-A-T | 20180085-A-T | DYZ19 | *** | |||||
22248537-T-A | 20086651-T-A | DYZ19 | *** | |||||
22349435-C-G | 20187549-C-G | FGC15913 | DYZ19 | *** | ||||
24388091-T-TAA | 22241944-T-TAA | *** | ||||||
22481326-G-C | 20319440-G-C | DYZ19 | *** | |||||
26262523-T-C | 24116376-T-C | P1_Y1 | *** | |||||
26538885-T-A | 24392738-T-A | P1_g2 | *** | |||||
22309078-G-A | 20147192-G-A | DYZ19 | *** | |||||
22330090-T-G | 20168204-T-G | DYZ19 | *** | |||||
14610673-A-C | 12498875-A-C | *** | ||||||
22358609-A-C | 20196723-A-C | DYZ19 | *** | |||||
13471960-CGCC-TGCT | 11316284-CGCC-TGCT | *** | ||||||
13471969-CACTG-AACCA | 11316293-CACTG-AACCA | *** | ||||||
22274188-G-T | 20112302-G-T | DYZ19 | *** | |||||
4848382-ATG-A | 4980341-ATG-A | *** | ||||||
6040788-G-GAA | 6172747-G-GAA | *** | ||||||
7545014-G-GC | 7676973-G-GC | *** | ||||||
9429479-AT-A | 9591870-AT-A | *** | ||||||
15557157-ATATATT-A | 13445277-ATATATT-A | *** | ||||||
22237258-G-A | 20075372-G-A | DYZ19 | *** | |||||
22237270-A-C | 20075384-A-C | DYZ19 | *** | |||||
22237289-A-C | 20075403-A-C | DYZ19 | *** | |||||
26465969-T-A | 24319822-T-A | P1_Y1 | *** | |||||
6903421-G-C | 7035380-G-C | *** | ||||||
22450153-A-C | 20288267-A-C | DYZ19 | *** | |||||
26024841-G-C | 23878694-G-C | GG046 | P1_Y1 | *** | ||||
22330453-G-T | 20168567-G-T | DYZ19 | *** | |||||
22356884-T-A | 20194998-T-A | DYZ19 | *** | |||||
22237153-A-T | 20075267-A-T | DYZ19 | *** | |||||
8481197-T-A | 8613156-T-A | FT345691 | *** | |||||
13262097-A-G | 11106421-A-G | *** | ||||||
13383095-T-G | 11227419-T-G | *** | ||||||
16978870-C-T | 14866990-C-T | Z9322 | *** | |||||
20084533-G-T | 17972653-G-T | P5_Dst | *** | |||||
20084534-G-T | 17972654-G-T | P5_Dst | *** | |||||
22503322-G-A | 20341436-G-A | DYZ19 | *** | |||||
58876310-C-T | 56714561-G-A | *** | ||||||
22262577-ATGT-GTGC | 20100691-ATGT-GTGC | DYZ19 | *** | |||||
22297134-C-T | 20135248-C-T | DYZ19 | *** | |||||
28022799-T-G | 25876652-T-G | P1_Y2 | *** | |||||
13478281-ATCCG-CTCCT | 11322605-ATCCG-CTCCT | *** | ||||||
15047301-T-TA | 12935392-T-TA | *** | ||||||
22356760-GTCCATCACATA-TTCCTTCAGATG | 20194874-GTCCATCACATA-TTCCTTCAGATG | DYZ19 | *** | |||||
22366592-T-C | 20204706-T-C | DYZ19 | *** | |||||
26170527-GGAA-G | 24024380-GGAA-G | P1_Y1 | 23×GAA | *** | ||||
6196837-G-A | 6328796-G-A | IR3_Dst | *** | |||||
22341930-T-C | 20180044-T-C | DYZ19 | *** | |||||
22422749-G-T | 20260863-G-T | DYZ19 | *** | |||||
24388082-A-ATT | 22241935-A-ATT | *** | ||||||
22189214-G-A | 20027328-G-A | *** | ||||||
22341368-G-A | 20179482-G-A | DYZ19 | *** | |||||
22348874-A-T | 20186988-A-T | DYZ19 | *** | |||||
13489725-C-T | 11334049-C-T | *** | ||||||
22330382-G-C | 20168496-G-C | DYZ19 | *** | |||||
22252530-T-G | 20090644-T-G | BY43693 | DYZ19 | *** | ||||
13813881-C-G | 11693175-C-G | DYZ17 | *** | |||||
58837227-G-A | 56753644-C-T | *** | ||||||
22777146-C-T | 20615260-C-T | *** | ||||||
27483079-T-C | 25336932-T-C | P1_Y2 | *** | |||||
58874004-A-C | 56716867-T-G | *** | ||||||
5107325-T-A | 5239284-T-A | *** | ||||||
2674448-T-G | 2806407-T-G | *** | ||||||
2674597-C-A | 2806556-C-A | *** | ||||||
3167013-G-A | 3298972-G-A | *** | ||||||
3207279-A-C | 3339238-A-C | *** | ||||||
3312175-A-G | 3444134-A-G | *** | ||||||
3461923-C-T | 3593882-C-T | *** | ||||||
3495467-G-T | 3627426-G-T | *** | ||||||
3548701-G-C | 3680660-G-C | *** | ||||||
3576229-A-G | 3708188-A-G | *** | ||||||
3603646-C-A | 3735605-C-A | *** | ||||||
3603659-G-A | 3735618-G-A | *** | ||||||
3634304-T-G | 3766263-T-G | *** | ||||||
3785724-G-C | 3917683-G-C | *** | ||||||
4020170-A-C | 4152129-A-C | *** | ||||||
4020176-T-A | 4152135-T-A | *** | ||||||
4020184-G-T | 4152143-G-T | *** | ||||||
4020185-T-C | 4152144-T-C | *** | ||||||
4020192-G-C | 4152151-G-C | *** | ||||||
4020198-T-G | 4152157-T-G | *** | ||||||
4020200-A-T | 4152159-A-T | *** | ||||||
4020208-T-C | 4152167-T-C | *** | ||||||
4020211-T-G | 4152170-T-G | *** | ||||||
4020214-A-G | 4152173-A-G | *** | ||||||
4020215-T-C | 4152174-T-C | *** | ||||||
4020217-A-G | 4152176-A-G | *** | ||||||
4020224-T-C | 4152183-T-C | *** | ||||||
4224043-G-A | 4356002-G-A | *** | ||||||
4228156-G-T | 4360115-G-T | *** | ||||||
4331844-G-A | 4463803-G-A | *** | ||||||
4822500-G-T | 4954459-G-T | *** | ||||||
4914863-T-C | 5046822-T-C | *** | ||||||
5107283-G-T | 5239242-G-T | *** | ||||||
5107284-T-C | 5239243-T-C | *** | ||||||
5107301-C-T | 5239260-C-T | *** | ||||||
5107303-T-C | 5239262-T-C | *** | ||||||
5107306-A-G | 5239265-A-G | *** | ||||||
5107313-G-C | 5239272-G-C | *** | ||||||
5196262-T-G | 5328221-T-G | *** | ||||||
5196276-G-A | 5328235-G-A | *** | ||||||
5806462-T-A | 5938421-T-A | *** | ||||||
6040775-G-A | 6172734-G-A | *** | ||||||
6155591-T-A | 6287550-T-A | IR3_Dst | *** | |||||
6157893-C-T | 6289852-C-T | IR3_Dst | *** | |||||
6170980-C-T | 6302939-C-T | IR3_Dst | *** | |||||
6178098-A-G | 6310057-A-G | IR3_Dst | *** | |||||
6196810-A-G | 6328769-A-G | IR3_Dst | *** | |||||
6196829-C-T | 6328788-C-T | IR3_Dst | *** | |||||
6196830-A-C | 6328789-A-C | IR3_Dst | *** | |||||
6196836-T-C | 6328795-T-C | IR3_Dst | *** | |||||
6196868-G-A | 6328827-G-A | IR3_Dst | *** | |||||
6196875-T-A | 6328834-T-A | IR3_Dst | *** | |||||
6196881-A-T | 6328840-A-T | IR3_Dst | *** | |||||
6313134-C-A | 6445093-C-A | IR3_Dst | *** | |||||
6597329-G-A | 6729288-G-A | *** | ||||||
6903471-G-A | 7035430-G-A | *** | ||||||
7060037-C-T | 7191996-C-T | *** | ||||||
7142102-T-G | 7274061-T-G | *** | ||||||
7440101-T-C | 7572060-T-C | *** | ||||||
7443872-T-A | 7575831-T-A | *** | ||||||
7491137-C-A | 7623096-C-A | IR1_L | *** | |||||
8276490-C-T | 8408449-C-T | *** | ||||||
8276493-C-A | 8408452-C-A | *** | ||||||
8276506-C-G | 8408465-C-G | *** | ||||||
8276534-G-T | 8408493-G-T | *** | ||||||
9189547-A-G | 9351938-A-G | *** | ||||||
9191051-T-C | 9353442-T-C | *** | ||||||
9191071-T-C | 9353462-T-C | *** | ||||||
9308523-C-T | 9470914-C-T | *** | ||||||
9355206-A-T | 9517597-A-T | *** | ||||||
9362310-G-C | 9524701-G-C | *** | ||||||
9525924-T-C | 9688315-T-C | *** | ||||||
9617365-G-T | 9779756-G-T | IR3_Prx | *** | |||||
9673766-A-T | 9836157-A-T | IR3_Prx | *** | |||||
9674804-G-T | 9837195-G-T | IR3_Prx | *** | |||||
9674825-A-T | 9837216-A-T | IR3_Prx | *** | |||||
9699647-C-A | 9862038-C-A | IR3_Prx | *** | |||||
9719190-T-C | 9881581-T-C | IR3_Prx | *** | |||||
9779313-A-C | 9941704-A-C | *** | ||||||
9946368-C-T | 10108759-C-T | *** | ||||||
9998165-A-T | 10160556-A-T | *** | ||||||
10009178-A-T | 10171569-A-T | *** | ||||||
13194521-A-C | 11038845-A-C | *** | ||||||
13253137-A-G | 11097461-A-G | *** | ||||||
13267644-A-T | 11111968-A-T | *** | ||||||
13340625-G-T | 11184949-G-T | *** | ||||||
13361655-G-T | 11205979-G-T | *** | ||||||
13459591-G-T | 11303915-G-T | *** | ||||||
13471198-C-T | 11315522-C-T | *** | ||||||
13489607-G-A | 11333931-G-A | *** | ||||||
13489743-C-T | 11334067-C-T | *** | ||||||
13489765-T-C | 11334089-T-C | *** | ||||||
13489769-C-A | 11334093-C-A | *** | ||||||
13489771-G-T | 11334095-G-T | *** | ||||||
13489804-C-T | 11334128-C-T | *** | ||||||
13489819-G-A | 11334143-G-A | *** | ||||||
13489898-C-A | 11334222-C-A | *** | ||||||
13549076-C-A | 11393400-C-A | *** | ||||||
13549177-T-A | 11393501-T-A | *** | ||||||
13583737-G-T | 11428061-G-T | *** | ||||||
13596465-C-T | 11440789-C-T | *** | ||||||
13645509-G-T | 11489833-G-T | *** | ||||||
13726699-G-T | 11571023-G-T | DYZ17 | *** | |||||
13729784-C-T | 11574108-C-T | DYZ17 | *** | |||||
13735703-A-G | 11580027-A-G | DYZ17 | *** | |||||
13910256-G-T | 11789550-G-T | *** | ||||||
13978820-C-A | 11858114-C-A | *** | ||||||
14114177-C-T | 11993471-C-T | *** | ||||||
14178677-A-G | 12057971-A-G | *** | ||||||
14304196-A-T | 12183490-A-T | *** | ||||||
14307179-G-T | 12186473-G-T | *** | ||||||
14467331-T-C | 12346600-T-C | *** | ||||||
14564755-T-A | 12452955-T-A | *** | ||||||
14625046-C-A | 12513246-C-A | *** | ||||||
15101471-C-A | 12989559-C-A | *** | ||||||
15221291-A-G | 13109377-A-G | *** | ||||||
15221308-T-A | 13109394-T-A | *** | ||||||
15242818-G-T | 13130904-G-T | *** | ||||||
15297333-G-T | 13185432-G-T | *** | ||||||
15297349-T-G | 13185448-T-G | *** | ||||||
15626596-G-T | 13514716-G-T | *** | ||||||
15626626-G-T | 13514746-G-T | *** | ||||||
15629354-G-A | 13517474-G-A | *** | ||||||
15804018-G-T | 13692138-G-T | *** | ||||||
15889263-G-A | 13777383-G-A | *** | ||||||
15889434-G-A | 13777554-G-A | *** | ||||||
15891808-T-C | 13779928-T-C | *** | ||||||
15960471-A-C | 13848591-A-C | *** | ||||||
15960760-G-T | 13848880-G-T | *** | ||||||
15963222-G-T | 13851342-G-T | *** | ||||||
16686835-A-T | 14574955-A-T | *** | ||||||
16881557-A-T | 14769677-A-T | *** | ||||||
16978873-A-G | 14866993-A-G | *** | ||||||
17006286-G-T | 14894406-G-T | *** | ||||||
17030650-A-C | 14918770-A-C | *** | ||||||
17126212-G-A | 15014332-G-A | *** | ||||||
17162335-A-T | 15050455-A-T | *** | ||||||
17724229-T-C | 15612349-T-C | *** | ||||||
17724235-A-T | 15612355-A-T | *** | ||||||
17724248-G-A | 15612368-G-A | *** | ||||||
17724266-C-T | 15612386-C-T | *** | ||||||
17724267-A-G | 15612387-A-G | *** | ||||||
17724273-T-A | 15612393-T-A | *** | ||||||
17757235-A-C | 15645355-A-C | *** | ||||||
17991092-A-T | 15879212-A-T | P7_Prx | *** | |||||
18135572-A-T | 16023692-A-T | *** | ||||||
18230358-T-C | 16118478-T-C | *** | ||||||
18274707-G-T | 16162827-G-T | P6_Prx | *** | |||||
18366960-C-A | 16255080-C-A | P6_Prx | *** | |||||
18542569-A-C | 16430689-A-C | *** | ||||||
18622793-A-C | 16510913-A-C | *** | ||||||
18875517-T-C | 16763637-T-C | *** | ||||||
19012901-T-A | 16901021-T-A | *** | ||||||
19310723-C-T | 17198843-C-T | *** | ||||||
19487356-G-C | 17375476-G-C | *** | ||||||
19487374-C-T | 17375494-C-T | *** | ||||||
19487412-G-A | 17375532-G-A | *** | ||||||
19560889-C-T | 17449009-C-T | *** | ||||||
19753431-G-T | 17641551-G-T | P5_Prx | *** | |||||
19753483-A-C | 17641603-A-C | P5_Prx | *** | |||||
19815974-T-C | 17704094-T-C | P5_Prx | *** | |||||
19845514-A-T | 17733634-A-T | P5_Prx | *** | |||||
20062497-T-C | 17950617-T-C | P5_Prx | *** | |||||
20084536-G-T | 17972656-G-T | P5_Dst | *** | |||||
20084893-A-T | 17973013-A-T | P5_Dst | *** | |||||
20306729-C-T | 18144843-C-T | P5_Dst | *** | |||||
20329994-T-A | 18168108-T-A | P5_Dst | *** | |||||
20330945-G-C | 18169059-G-C | P5_Dst | *** | |||||
20408273-T-C | 18246387-T-C | P5_Dst | *** | |||||
20425318-G-T | 18263432-G-T | P5_Dst | *** | |||||
20426452-G-T | 18264566-G-T | P5_Dst | *** | |||||
20865944-T-C | 18704058-T-C | P4_Dst | *** | |||||
20887947-A-G | 18726061-A-G | P4_Dst | *** | |||||
20908822-G-A | 18746936-G-A | P4_Dst | *** | |||||
20998190-T-C | 18836304-T-C | P4_Dst | *** | |||||
20998263-T-G | 18836377-T-G | P4_Dst | *** | |||||
21012759-T-C | 18850873-T-C | P4_Dst | *** | |||||
21119620-A-T | 18957734-A-T | *** | ||||||
21409196-C-A | 19247310-C-A | *** | ||||||
21448017-C-T | 19286131-C-T | *** | ||||||
21448202-C-T | 19286316-C-T | *** | ||||||
21448275-G-A | 19286389-G-A | *** | ||||||
21574072-C-T | 19412186-C-T | *** | ||||||
21578220-A-G | 19416334-A-G | *** | ||||||
21579442-A-T | 19417556-A-T | *** | ||||||
22204050-C-A | 20042164-C-A | *** | ||||||
22223940-T-C | 20062054-T-C | DYZ19 | *** | |||||
22223951-T-G | 20062065-T-G | DYZ19 | *** | |||||
22237134-A-G | 20075248-A-G | DYZ19 | *** | |||||
22237162-A-T | 20075276-A-T | DYZ19 | *** | |||||
22237163-C-T | 20075277-C-T | DYZ19 | *** | |||||
22248543-T-A | 20086657-T-A | DYZ19 | *** | |||||
22252524-C-T | 20090638-C-T | DYZ19 | *** | |||||
22252528-C-A | 20090642-C-A | DYZ19 | *** | |||||
22283206-G-T | 20121320-G-T | DYZ19 | *** | |||||
22283221-T-G | 20121335-T-G | DYZ19 | *** | |||||
22283226-C-T | 20121340-C-T | DYZ19 | *** | |||||
22283232-A-T | 20121346-A-T | DYZ19 | *** | |||||
22292844-A-G | 20130958-A-G | DYZ19 | *** | |||||
22297133-C-A | 20135247-C-A | DYZ19 | *** | |||||
22305946-A-G | 20144060-A-G | DYZ19 | *** | |||||
22305961-G-A | 20144075-G-A | DYZ19 | *** | |||||
22311178-T-A | 20149292-T-A | DYZ19 | *** | |||||
22311209-C-G | 20149323-C-G | DYZ19 | *** | |||||
22311210-A-T | 20149324-A-T | DYZ19 | *** | |||||
22311232-T-A | 20149346-T-A | DYZ19 | *** | |||||
22330456-T-A | 20168570-T-A | DYZ19 | *** | |||||
22333334-A-T | 20171448-A-T | DYZ19 | *** | |||||
22341168-C-A | 20179282-C-A | DYZ19 | *** | |||||
22341173-G-A | 20179287-G-A | DYZ19 | *** | |||||
22341179-A-T | 20179293-A-T | DYZ19 | *** | |||||
22341180-G-A | 20179294-G-A | DYZ19 | *** | |||||
22341578-G-T | 20179692-G-T | DYZ19 | *** | |||||
22341688-G-T | 20179802-G-T | DYZ19 | *** | |||||
22341934-G-C | 20180048-G-C | DYZ19 | *** | |||||
22341972-G-T | 20180086-G-T | DYZ19 | *** | |||||
22341973-A-T | 20180087-A-T | DYZ19 | *** | |||||
22349408-C-G | 20187522-C-G | DYZ19 | *** | |||||
22349424-T-A | 20187538-T-A | DYZ19 | *** | |||||
22349721-A-T | 20187835-A-T | DYZ19 | *** | |||||
22352473-A-T | 20190587-A-T | DYZ19 | *** | |||||
22358243-G-T | 20196357-G-T | DYZ19 | *** | |||||
22360189-C-G | 20198303-C-G | DYZ19 | *** | |||||
22367597-T-G | 20205711-T-G | DYZ19 | *** | |||||
22450191-A-T | 20288305-A-T | DYZ19 | *** | |||||
22452440-T-G | 20290554-T-G | DYZ19 | *** | |||||
22481128-G-T | 20319242-G-T | DYZ19 | *** | |||||
22481176-C-A | 20319290-C-A | DYZ19 | *** | |||||
22481178-A-G | 20319292-A-G | DYZ19 | *** | |||||
22481255-C-G | 20319369-C-G | DYZ19 | *** | |||||
22481262-G-A | 20319376-G-A | DYZ19 | *** | |||||
22481264-G-C | 20319378-G-C | DYZ19 | *** | |||||
22481279-C-A | 20319393-C-A | DYZ19 | *** | |||||
22481280-T-C | 20319394-T-C | DYZ19 | *** | |||||
22490168-C-A | 20328282-C-A | DYZ19 | *** | |||||
22498899-A-T | 20337013-A-T | DYZ19 | *** | |||||
22503353-G-C | 20341467-G-C | DYZ19 | *** | |||||
22503355-G-T | 20341469-G-T | DYZ19 | *** | |||||
22503368-T-G | 20341482-T-G | DYZ19 | *** | |||||
22503658-A-G | 20341772-A-G | DYZ19 | *** | |||||
22503661-C-G | 20341775-C-G | DYZ19 | *** | |||||
22503669-C-T | 20341783-C-T | DYZ19 | *** | |||||
22503683-T-C | 20341797-T-C | DYZ19 | *** | |||||
22504529-G-T | 20342643-G-T | DYZ19 | *** | |||||
22545577-A-G | 20383691-A-G | *** | ||||||
22757267-T-A | 20595381-T-A | *** | ||||||
22777150-T-A | 20615264-T-A | *** | ||||||
23192414-A-G | 21030528-A-G | *** | ||||||
23230917-C-T | 21069031-C-T | *** | ||||||
23318058-A-T | 21156172-A-T | *** | ||||||
23318061-C-T | 21156175-C-T | *** | ||||||
23519304-G-T | 21357418-G-T | *** | ||||||
23660898-A-G | 21499012-A-G | *** | ||||||
24013652-G-A | 21867505-G-A | *** | ||||||
24073487-G-T | 21927340-G-T | P3_b1 | *** | |||||
24073490-A-T | 21927343-A-T | P3_b1 | *** | |||||
24110064-T-C | 21963917-T-C | P3_b1 | *** | |||||
24126032-C-A | 21979885-C-A | P3_b1 | *** | |||||
24181679-T-A | 22035532-T-A | P3_b1 | *** | |||||
24283301-C-A | 22137154-C-A | P3_t1 | *** | |||||
24387334-C-T | 22241187-C-T | *** | ||||||
24490170-G-T | 22344023-G-T | *** | ||||||
24595301-T-C | 22449154-T-C | P3_t2 | *** | |||||
24686530-A-T | 22540383-A-T | P3_b2 | *** | |||||
24705741-G-T | 22559594-G-T | P3_b2 | *** | |||||
24753061-G-T | 22606914-G-T | P3_b2 | *** | |||||
24862106-C-A | 22715959-C-A | IR1_R | *** | |||||
24896528-G-T | 22750381-G-T | g1 | *** | |||||
24935409-C-T | 22789262-C-T | g1 | *** | |||||
24970519-C-A | 22824372-C-A | g1 | *** | |||||
24970677-G-T | 22824530-G-T | g1 | *** | |||||
25056249-T-G | 22910102-T-G | g1 | *** | |||||
25097126-C-T | 22950979-C-T | g1 | *** | |||||
25176354-C-A | 23030207-C-A | g1 | *** | |||||
25207736-T-A | 23061589-T-A | P2_r1 | *** | |||||
25241352-C-A | 23095205-C-A | P2_r1 | *** | |||||
25273901-C-T | 23127754-C-T | P2_r1 | *** | |||||
25296453-G-T | 23150306-G-T | P2_r1 | *** | |||||
25312568-T-G | 23166421-T-G | P2_r1 | *** | |||||
25323140-G-T | 23176993-G-T | P2_r1 | *** | |||||
25359645-C-A | 23213498-C-A | P2_r2 | *** | |||||
25377298-G-T | 23231151-G-T | P2_r2 | *** | |||||
25379803-T-C | 23233656-T-C | P2_r2 | *** | |||||
25466190-C-A | 23320043-C-A | P2_r2 | *** | |||||
25586875-T-A | 23440728-T-A | P1_gr1 | *** | |||||
25628502-C-T | 23482355-C-T | P1_b3 | *** | |||||
25628503-A-T | 23482356-A-T | P1_b3 | *** | |||||
25628636-C-A | 23482489-C-A | P1_b3 | *** | |||||
25628641-G-A | 23482494-G-A | P1_b3 | *** | |||||
25628657-C-T | 23482510-C-T | P1_b3 | *** | |||||
25720495-G-A | 23574348-G-A | P1_b3 | *** | |||||
25730056-C-A | 23583909-C-A | P1_b3 | *** | |||||
25791963-T-C | 23645816-T-C | P1_b3 | *** | |||||
25839384-G-A | 23693237-G-A | P1_b3 | *** | |||||
26024766-G-T | 23878619-G-T | P1_Y1 | *** | |||||
26065631-G-T | 23919484-G-T | P1_Y1 | *** | |||||
26124379-C-A | 23978232-C-A | P1_Y1 | *** | |||||
26201643-G-T | 24055496-G-T | P1_Y1 | *** | |||||
26228967-A-T | 24082820-A-T | P1_Y1 | *** | |||||
26248621-C-A | 24102474-C-A | P1_Y1 | *** | |||||
26263907-T-C | 24117760-T-C | P1_Y1 | *** | |||||
26433613-A-T | 24287466-A-T | P1_Y1 | *** | |||||
26466230-C-T | 24320083-C-T | P1_Y1 | *** | |||||
26484123-G-A | 24337976-G-A | P1_Y1 | *** | |||||
26500188-G-T | 24354041-G-T | P1_Y1 | *** | |||||
26810756-G-C | 24664609-G-C | P1_g2 | *** | |||||
27053909-G-A | 24907762-G-A | P1_r4 | *** | |||||
27060563-A-T | 24914416-A-T | P1_r4 | *** | |||||
27221877-T-A | 25075730-T-A | P1_g3 | *** | |||||
27356859-T-A | 25210712-T-A | P1_g3 | *** | |||||
27398082-T-A | 25251935-T-A | P1_g3 | *** | |||||
27483132-G-A | 25336985-G-A | P1_Y2 | *** | |||||
27553682-T-G | 25407535-T-G | P1_Y2 | *** | |||||
27571237-G-T | 25425090-G-T | P1_Y2 | *** | |||||
27585980-T-G | 25439833-T-G | P1_Y2 | *** | |||||
27593368-C-T | 25447221-C-T | P1_Y2 | *** | |||||
27608488-A-G | 25462341-A-G | P1_Y2 | *** | |||||
27619088-G-C | 25472941-G-C | P1_Y2 | *** | |||||
27619119-C-G | 25472972-C-G | P1_Y2 | *** | |||||
27647241-T-C | 25501094-T-C | P1_Y2 | *** | |||||
27663299-G-A | 25517152-G-A | P1_Y2 | *** | |||||
27691554-T-A | 25545407-T-A | P1_Y2 | *** | |||||
27692192-A-G | 25546045-A-G | P1_Y2 | *** | |||||
27733610-T-G | 25587463-T-G | P1_Y2 | *** | |||||
27733707-T-A | 25587560-T-A | P1_Y2 | *** | |||||
27783436-T-A | 25637289-T-A | P1_Y2 | *** | |||||
27916539-G-T | 25770392-G-T | P1_Y2 | *** | |||||
27971698-C-A | 25825551-C-A | P1_Y2 | *** | |||||
28018184-T-G | 25872037-T-G | P1_Y2 | *** | |||||
28018651-A-T | 25872504-A-T | P1_Y2 | *** | |||||
28022794-T-G | 25876647-T-G | P1_Y2 | *** | |||||
28053787-G-T | 25907640-G-T | P1_Y2 | *** | |||||
28063340-G-T | 25917193-G-T | P1_Y2 | *** | |||||
28200838-C-T | 26054691-C-T | P1_b4 | *** | |||||
28205368-G-T | 26059221-G-T | P1_b4 | *** | |||||
28246205-G-A | 26100058-G-A | P1_b4 | *** | |||||
28281499-G-T | 26135352-G-T | P1_b4 | *** | |||||
58829352-T-A | 56761519-A-T | *** | ||||||
58837379-T-C | 56753492-A-G | *** | ||||||
58837591-G-A | 56753280-C-T | *** | ||||||
58845033-A-G | 56745838-T-C | *** | ||||||
58863794-G-T | 56727077-C-A | *** | ||||||
58867977-G-T | 56722894-C-A | *** | ||||||
58869487-A-T | 56721384-T-A | *** | ||||||
58873182-A-T | 56717689-T-A | *** | ||||||
58873405-G-C | 56717466-C-G | *** | ||||||
58876842-C-A | 56714029-G-T | *** | ||||||
58876869-A-C | 56714002-T-G | *** | ||||||
58877320-A-T | 56713551-T-A | *** | ||||||
58879502-T-C | 56711369-A-G | *** | ||||||
58882052-A-C | 56708819-T-G | *** | ||||||
58885575-C-T | 56705296-G-A | *** | ||||||
58887820-C-T | 56703051-G-A | *** | ||||||
58891022-A-T | 56699849-T-A | *** | ||||||
58898719-A-T | 56692152-T-A | *** | ||||||
58899421-A-C | 56691450-T-G | *** | ||||||
58899434-A-T | 56691437-T-A | *** | ||||||
58903002-A-T | 56687869-T-A | *** | ||||||
58913899-A-G | 56676972-T-C | *** | ||||||
58913913-G-T | 56676958-C-A | *** | ||||||
58913987-C-G | 56676884-G-C | *** | ||||||
16344410-C-CTTCTTT | 14232530-C-CTTCTTT | *** | ||||||
19261150-C-TT | 17149270-C-TT | *** | ||||||
15658212-CGT-C | 13546332-CGT-C | *** | ||||||
24387413-CCA-C | 22241266-CCA-C | *** | ||||||
2903290-CCTTC-T | 3035249-CCTTC-T | *** | ||||||
3930604-TAC-T | 4062563-TAC-T | *** | ||||||
4167657-CAAAAAAA-C | 4299616-CAAAAAAA-C | 18×A | *** | |||||
4826400-T-TTATA | 4958359-T-TTATA | 22×TA | *** | |||||
5028088-T-TAATAG | 5160047-T-TAATAG | *** | ||||||
7545015-G-GT | 7676974-G-GT | *** | ||||||
8125069-G-GGGAAA | 8257028-G-GGGAAA | *** | ||||||
8468065-CAAAAAAAAAA-C | 8600024-CAAAAAAAAAA-C | 24×A | *** | |||||
9654338-AGAAAGAAAG-GATAGAAAGAAAGAAAGA | 9816729-AGAAAGAAAG-GATAGAAAGAAAGAAAGA | IR3_Prx | *** | |||||
13194516-ATTCCAT-A | 11038840-ATTCCAT-A | *** | ||||||
13454810-T-TCCATC | 11299134-T-TCCATC | *** | ||||||
13454818-A-ATTCCT | 11299142-A-ATTCCT | *** | ||||||
13471944-GGGC-CGGT | 11316268-GGGC-CGGT | *** | ||||||
13471993-CCTGC-GCTGT | 11316317-CCTGC-GCTGT | *** | ||||||
13472003-TGG-AGA | 11316327-TGG-AGA | *** | ||||||
13730698-AT-TA | 11575022-AT-TA | DYZ17 | *** | |||||
13733865-ACGAGCGCAA-TGGACCACAT | 11578189-ACGAGCGCAA-TGGACCACAT | DYZ17 | *** | |||||
13983583-G-GAAGTAAGC | 11862877-G-GAAGTAAGC | *** | ||||||
14610887-A-ACATG | 12499093-A-ACATG | *** | ||||||
14610903-A-ACATG | 12499109-A-ACATG | *** | ||||||
14610908-C-CATAG | 12499114-C-CATAG | *** | ||||||
14645416-TTTTG-T | 12533480-TTTTG-T | *** | ||||||
15491537-C-CA | 13379657-C-CA | *** | ||||||
17274965-G-GATAT | 15163085-G-GATAT | *** | ||||||
17274967-T-TAGAA | 15163087-T-TAGAA | *** | ||||||
17274975-T-TAGAC | 15163095-T-TAGAC | *** | ||||||
17274979-T-TAGAA | 15163099-T-TAGAA | *** | ||||||
17991069-ATATATAT-A | 15879189-ATATATAT-A | P7_Prx | *** | |||||
17991090-ATA-TT | 15879210-ATA-TT | P7_Prx | *** | |||||
19486859-CTTTTT-C | 17374979-CTTTTT-C | 16×T | *** | |||||
19500593-G-GAGAAAGAAAGAAAGAA | 17388713-G-GAGAAAGAAAGAAAGAA | 15×AGAA | *** | |||||
21464204-G-GAAAGAAAA | 19302318-G-GAAAGAAAA | *** | ||||||
21464210-A-AAGAAAGAG | 19302324-A-AAGAAAGAG | *** | ||||||
22341149-CTTCT-GTTCA | 20179263-CTTCT-GTTCA | DYZ19 | *** | |||||
22341179-AG-TA | 20179293-AG-TA | DYZ19 | *** | |||||
22358173-TTTCG-GTACA | 20196287-TTTCG-GTACA | DYZ19 | *** | |||||
22481124-TTATG-GTATT | 20319238-TTATG-GTATT | DYZ19 | *** | |||||
24232042-ACTCT-CCTCC | 22085895-ACTCT-CCTCC | P3_b1 | *** | |||||
24232072-CAAC-AAAA | 22085925-CAAC-AAAA | P3_b1 | *** | |||||
27483131-TG-CA | 25336984-TG-CA | P1_Y2 | *** | |||||
58829352-TCGA-ATGC | 56761516-TCGA-GCAT | *** | ||||||
58844979-TCCATTTGATGCCATC-T | 56745872-CATGGGATGGCATCAA-C | *** | ||||||
58908884-CCATTCCATTCCATTCCATTG-C | 56681952-CAATGGAATGGAATGCAATGG-C | *** | ||||||
58980036-CCACG-TCACT | 56833889-CCACG-TCACT | *** | ||||||
58986163-TGCCTAA-AGCTTAC | 56840016-TGCCTAA-AGCTTAC | *** | ||||||
59022603-AAAC-A | 56876456-AAAC-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.