Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > A259 > Y19870 > ~24931622-G-A > FGC42414

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
XFEFM
18185124-C-T 16073244-C-T FGC42415 Y+
9693106-T-C 9855497-T-C FGC42413 IR3_Prx +
28580874-A-G 26434727-A-G FGC42422 +
9384786-C-G 9547177-C-G FGC42412 Y+
24877609-G-C 22731462-G-C FGC42420 g1 +
8725253-G-A 8857212-G-A FGC42411 YY+
23013635-C-T 20851749-C-T FGC42418 YY+
28728750-A-AT 26582603-A-AT +
24879371-G-T 22733224-G-T FGC42421 g1 +
19035798-A-C 16923918-A-C FGC42416 YY+
4547679-G-A 4679638-G-A FGC42410 +
22359143-G-C 20197257-G-C FGC42417 DYZ19 *
6091759-TA-T 6223718-TA-T *
24188630-C-G 22042483-C-G FGC42419 P3_b1 *
58856356-T-G 56734515-A-C **
59000025-G-A 56853878-G-A **
23102783-A-T 20940897-A-T **
17700084-T-C 15588204-T-C **
13393000-A-T 11237324-A-T **
13339784-T-C 11184108-T-C **
28794830-C-G 26648683-C-G **
15102613-C-T 12990701-C-T **
17700085-G-A 15588205-G-A **
17895992-T-TA 15784112-T-TA **
15884145-G-T 13772265-G-T **
8666801-G-A 8798760-G-A **
13585500-GGC-G 11429824-GGC-G **
15187635-C-T 13075721-C-T **
15187681-T-A 13075767-T-A **
15247658-G-A 13135744-G-A **
17231048-GA-G 15119168-GA-G **
24375348-G-A 22229201-G-A **
17700086-T-C 15588206-T-C **
25181764-C-G 23035617-C-G g1 **
19425267-T-A 17313387-T-A **
21631609-G-A 19469723-G-A **
19425268-C-G 17313388-C-G **
19425280-C-G 17313400-C-G **
19425281-A-G 17313401-A-G **
22457252-T-G 20295366-T-G DYZ19 **
3822962-GATATATAT-G 3954921-GATATATAT-G 26×AT**
8739154-A-AAAT 8871113-A-AAAT 13×AAT**
17700080-C-T 15588200-C-T **
23293596-GTGTATATA-G 21131710-GTGTATATA-G **
23134163-TTGTTAAAACCTC-T 20972277-TTGTTAAAACCTC-T **
59013617-T-A 56867470-T-A **
5936159-GAT-G 6068118-GAT-G 19×AT**
22164269-C-A 20002383-C-A YFS1386832 **
22164262-A-G 20002376-A-G YFS1386831 **
22151317-A-G 19989431-A-G **
18190400-A-T 16078520-A-T YFS1386778 **
58862646-G-C 56728225-C-G **
18190399-G-A 16078519-G-A YFS1386777 **
19425269-A-T 17313389-A-T **
25973816-A-T 23827669-A-T P1_Y1 ***
26022127-A-C 23875980-A-C P1_Y1 ***
26047573-G-T 23901426-G-T P1_Y1 ***
25973802-C-A 23827655-C-A P1_Y1 ***
25930342-C-A 23784195-C-A P1_Y1 ***
26047591-A-T 23901444-A-T P1_Y1 ***
26100553-A-G 23954406-A-G P1_Y1 ***
26310742-A-T 24164595-A-T P1_Y1 ***
26206333-A-G 24060186-A-G P1_Y1 ***
26139555-T-C 23993408-T-C P1_Y1 ***
26154758-G-T 24008611-G-T P1_Y1 ***
26154792-A-G 24008645-A-G P1_Y1 ***
26179165-G-C 24033018-G-C P1_Y1 ***
26154817-G-T 24008670-G-T P1_Y1 ***
13724011-G-T 11568335-G-T ***
26810625-G-T 24664478-G-T P1_g2 ***
26359455-C-A 24213308-C-A P1_Y1 ***
27317761-C-T 25171614-C-T P1_g3 ***
27203969-G-T 25057822-G-T P1_g3 ***
27214278-A-T 25068131-A-T P1_g3 ***
27228679-G-A 25082532-G-A P1_g3 ***
27231232-T-C 25085085-T-C P1_g3 ***
27234606-C-A 25088459-C-A P1_g3 ***
27248289-C-T 25102142-C-T P1_g3 ***
27346362-G-A 25200215-G-A P1_g3 ***
27162822-C-T 25016675-C-T P1_g3 ***
27353074-A-C 25206927-A-C P1_g3 ***
27526850-A-C 25380703-A-C P1_Y2 ***
27562722-C-G 25416575-C-G P1_Y2 ***
27576876-C-T 25430729-C-T P1_Y2 ***
27586134-G-T 25439987-G-T P1_Y2 ***
27586182-G-T 25440035-G-T P1_Y2 ***
27641006-T-C 25494859-T-C P1_Y2 ***
27185997-G-T 25039850-G-T P1_g3 ***
27151372-G-T 25005225-G-T P1_g3 ***
26459274-G-T 24313127-G-T P1_Y1 ***
26748979-A-T 24602832-A-T P1_g2 ***
26463585-A-T 24317438-A-T P1_Y1 ***
26519742-G-T 24373595-G-T P1_Y1 ***
26542907-A-G 24396760-A-G P1_g2 ***
26553893-T-G 24407746-T-G P1_g2 ***
26616810-A-T 24470663-A-T P1_g2 ***
26658724-G-T 24512577-G-T P1_g2 ***
26713740-C-T 24567593-C-T P1_g2 ***
26810657-A-G 24664510-A-G P1_g2 ***
26981438-T-C 24835291-T-C P1_r4 ***
26810706-A-G 24664559-A-G P1_g2 ***
26890370-T-G 24744223-T-G P1_r3 ***
26902256-C-A 24756109-C-A P1_r3 ***
26902281-C-A 24756134-C-A P1_r3 ***
26906655-A-C 24760508-A-C P1_r3 ***
26908043-G-A 24761896-G-A P1_r3 ***
26980527-A-G 24834380-A-G P1_r4 ***
25902150-T-G 23756003-T-G P1_Y1 ***
25511662-T-C 23365515-T-C P1_gr1 ***
25825973-C-A 23679826-C-A P1_b3 ***
23228497-G-T 21066611-G-T ***
22619970-C-G 20458084-C-G ***
22642647-A-G 20480761-A-G ***
22779187-G-A 20617301-G-A ***
23006490-A-G 20844604-A-G ***
23100208-T-A 20938322-T-A ***
23180773-C-A 21018887-C-A ***
23181434-C-A 21019548-C-A ***
23261146-G-T 21099260-G-T ***
22505179-T-G 20343293-T-G DYZ19 ***
23448397-C-A 21286511-C-A ***
23520981-C-A 21359095-C-A ***
23808216-C-A 21646330-C-A ***
24043630-T-C 21897483-T-C ***
24051030-G-T 21904883-G-T P3_b1 ***
24126088-T-G 21979941-T-G P3_b1 ***
24133348-C-A 21987201-C-A P3_b1 ***
22593516-C-A 20431630-C-A ***
22505177-T-A 20343291-T-A DYZ19 ***
24231637-C-A 22085490-C-A P3_b1 ***
22482929-T-G 20321043-T-G DYZ19 ***
22366045-T-C 20204159-T-C DYZ19 ***
22366076-A-G 20204190-A-G DYZ19 ***
22422068-A-G 20260182-A-G DYZ19 ***
22422085-G-C 20260199-G-C DYZ19 ***
22422099-G-T 20260213-G-T DYZ19 ***
22422122-A-C 20260236-A-C DYZ19 ***
22457265-C-G 20295379-C-G DYZ19 ***
22482931-C-G 20321045-C-G DYZ19 ***
22505154-T-C 20343268-T-C DYZ19 ***
22499902-T-C 20338016-T-C DYZ19 ***
22502936-C-A 20341050-C-A DYZ19 ***
22503000-G-T 20341114-G-T DYZ19 ***
22503509-G-A 20341623-G-A DYZ19 ***
22504660-A-C 20342774-A-C DYZ19 ***
22505136-G-A 20343250-G-A DYZ19 ***
22505153-T-A 20343267-T-A DYZ19 ***
24211289-A-C 22065142-A-C P3_b1 ***
24231962-T-C 22085815-T-C P3_b1 ***
25825964-C-A 23679817-C-A P1_b3 ***
25510502-C-T 23364355-C-T P1_gr1 ***
25200310-C-T 23054163-C-T g1 ***
25268552-G-A 23122405-G-A P2_r1 ***
25268557-T-C 23122410-T-C P2_r1 ***
25297656-T-A 23151509-T-A P2_r1 ***
25310575-T-C 23164428-T-C P2_r1 ***
25452969-G-T 23306822-G-T P2_r2 ***
25508919-C-T 23362772-C-T P1_gr1 ***
27676812-T-C 25530665-T-C P1_Y2 ***
25110324-C-T 22964177-C-T g1 ***
25520132-T-G 23373985-T-G P1_gr1 ***
25545852-T-C 23399705-T-C P1_gr1 ***
25617849-T-A 23471702-T-A P1_gr1 ***
25626249-A-C 23480102-A-C P1_b3 ***
25626282-A-T 23480135-A-T P1_b3 ***
25825701-T-C 23679554-T-C P1_b3 ***
25825946-C-A 23679799-C-A P1_b3 ***
25137515-C-G 22991368-C-G g1 ***
25110238-A-G 22964091-A-G g1 ***
24257514-G-A 22111367-G-A P3_b1 ***
24673700-T-A 22527553-T-A P3_b2 ***
24264970-A-T 22118823-A-T P3_b1 ***
24264981-G-T 22118834-G-T P3_b1 ***
24290840-T-A 22144693-T-A P3_t1 ***
24387113-C-A 22240966-C-A ***
24573678-C-A 22427531-C-A P3_t2 ***
24605217-C-T 22459070-C-T P3_t2 ***
24646654-A-G 22500507-A-G P3_b2 ***
24763542-T-C 22617395-T-C P3_b2 ***
25058884-T-A 22912737-T-A g1 ***
24771059-G-A 22624912-G-A P3_b2 ***
24771141-G-T 22624994-G-T P3_b2 ***
24771148-G-T 22625001-G-T P3_b2 ***
24862194-T-G 22716047-T-G P3_b2 ***
24914311-T-A 22768164-T-A g1 ***
24997292-T-C 22851145-T-C g1 ***
25012695-G-T 22866548-G-T g1 ***
27663532-G-T 25517385-G-T P1_Y2 ***
28076602-T-C 25930455-T-C P1_Y2 ***
27692663-A-T 25546516-A-T P1_Y2 ***
13936206-A-AAGAC 11815500-A-AAGAC ***
13488324-CGCCC-TACCG 11332648-CGCCC-TACCG ***
13488362-CAGGCATC-AAGACATT 11332686-CAGGCATC-AAGACATT ***
13489202-CCTTCG-TGTAAT 11333526-CCTTCG-TGTAAT ***
13489233-CT-AC 11333557-CT-AC ***
13489635-AC-CA 11333959-AC-CA ***
13740728-A-AAATGG 11585052-A-AAATGG ***
13838169-A-ATGGAC 11717463-A-ATGGAC ***
14866143-G-GTTTT 12754213-G-GTTTT ***
13488186-GCCCAGA-TCCAAGG 11332510-GCCCAGA-TCCAAGG ***
14937863-C-CTTTTCTTTTA 12825938-C-CTTTTCTTTTA ***
14981859-TTCCTTCCT-A 12869927-TTCCTTCCT-A ***
15047300-T-TC 12935391-T-TC ***
16464533-TC-T 14352653-TC-T ***
16809479-A-AGATT 14697599-A-AGATT ***
17275764-A-AAGGGG 15163884-A-AAGGGG ***
17275765-A-AGGGAG 15163885-A-AGGGAG ***
13488311-CCG-ACA 11332635-CCG-ACA ***
13470626-AC-CG 11314950-AC-CG ***
17700080-CTCTTGT-TTCTCAC 15588200-CTCTTGT-TTCTCAC ***
8125070-A-AGAAGG 8257029-A-AGAAGG ***
5415304-A-ATCTG 5547263-A-ATCTG ***
6226034-TTCTTTCTA-T 6357993-TTCTTTCTA-T IR3_Dst ***
7336698-G-GATAGATAGATAT 7468657-G-GATAGATAGATAT ***
7573143-TC-T 7705102-TC-T ***
7907526-G-GA 8039485-G-GA ***
8125032-G-GAAAA 8256991-G-GAAAA ***
8125040-G-GAAAA 8256999-G-GAAAA ***
8498338-CAAAAA-C 8630297-CAAAAA-C 16×A***
13470594-GCG-ACA 11314918-GCG-ACA ***
9968339-G-GTT 10130730-G-GTT 15×T***
10041433-A-AGT 10203824-A-AGT ***
13445360-GACAAAA-G 11289684-GACAAAA-G ***
13461062-GTAGG-ATAGA 11305386-GTAGG-ATAGA ***
13470520-TGG-CGA 11314844-TGG-CGA ***
13470544-CA-TG 11314868-CA-TG ***
13470557-CCAGTGTCCATC-ATTGAGTGCGTG 11314881-CCAGTGTCCATC-ATTGAGTGCGTG ***
13470587-GC-AA 11314911-GC-AA ***
17275777-G-GGAAGT 15163897-G-GGAAGT ***
17737618-CAA-C 15625738-CAA-C 14×A***
4511163-CAA-C 4643122-CAA-C 26×A***
26810646-GCCCA-CCCCG 24664499-GCCCA-CCCCG P1_g2 ***
24264990-GG-CT 22118843-GG-CT P3_b1 ***
24425341-A-ATACT 22279194-A-ATACT ***
24447129-A-AAGAG 22300982-A-AAGAG ***
25323011-CTTTT-C 23176864-CTTTT-C P2_r1 30×T***
25995484-ACAGGAG-A 23849337-ACAGGAG-A P1_Y1 ***
26138361-CA-C 23992214-CA-C P1_Y1 10×A***
26344249-CAAA-C 24198102-CAAA-C P1_Y1 14×A***
28225579-GTTGT-TTTG 26079432-GTTGT-TTTG P1_b4 ***
22503610-GTGTT-CTGTC 20341724-GTGTT-CTGTC DYZ19 ***
58846313-AG-A 56744555-TC-T ***
58855315-TTCCAT-CTGCTCTCAAC 56735551-ATGGAA-GTTGAGAGCAG ***
58858901-CCATTCCATTCCATTG-C 56731937-GTGCAATGGAATGGAA-G ***
58874750-CTTC-TTTG 56716118-GAAG-CAAA ***
58912874-ATTCG-TTTCT 56677993-CGAAT-AGAAA ***
58974185-TG-CC 56828038-TG-CC ***
58979990-C-TCCATCCCACT 56833843-C-TCCATCCCACT 4×CCACT***
22996969-G-GATATATAT 20835083-G-GATATATAT 21×AT***
22503526-CT-AC 20341640-CT-AC DYZ19 ***
18190399-GA-AT 16078519-GA-AT ***
21251811-C-CA 19089925-C-CA ***
18393234-A-ATCTT 16281354-A-ATCTT P6_Gap ***
19346482-C-CTTTCTTTA 17234602-C-CTTTCTTTA ***
19372323-T-TAGAC 17260443-T-TAGAC ***
19412012-G-GAAAA 17300132-G-GAAAA ***
19425267-TCA-AGT 17313387-TCA-AGT ***
19425280-CA-GG 17313400-CA-GG ***
20363978-CT-C 18202092-CT-C P5_Dst ***
22287259-CTTC-GTTT 20125373-CTTC-GTTT DYZ19 ***
22435708-GCAG-ACAA 20273822-GCAG-ACAA DYZ19 ***
22297109-GA-CC 20135223-GA-CC DYZ19 ***
22330231-TGGA-CGGC 20168345-TGGA-CGGC DYZ19 ***
22330277-TTGGT-CTTAC 20168391-TTGGT-CTTAC DYZ19 ***
22341304-ACCGGTGA-TACGGAGG 20179418-ACCGGTGA-TACGGAGG DYZ19 ***
22341364-CCAGG-ACAGA 20179478-CCAGG-ACAGA DYZ19 ***
22346873-GG-AA 20184987-GG-AA DYZ19 ***
22346882-AGTCTGGCA-CTTCGGGCC 20184996-AGTCTGGCA-CTTCGGGCC DYZ19 ***
22422085-GGGTG-CGGTA 20260199-GGGTG-CGGTA DYZ19 ***
5388088-CA-C 5520047-CA-C 13×A***
3930563-GTATATATATA-G 4062522-GTATATATATA-G 21×TA***
27758128-T-C 25611981-T-C P1_Y2 ***
58823500-A-T 56767371-T-A ***
28438244-G-T 26292097-G-T P1_gr2 ***
28491691-T-C 26345544-T-C ***
28549491-G-A 26403344-G-A ***
28665775-T-A 26519628-T-A ***
58819474-A-G 56771397-T-C ***
58820159-G-T 56770712-C-A ***
58823407-A-C 56767464-T-G ***
58824926-A-T 56765945-T-A ***
28301497-C-A 26155350-C-A P1_b4 ***
58830308-C-G 56760563-G-C ***
58833208-G-C 56757663-C-G ***
58840760-C-G 56750111-G-C ***
58840770-C-A 56750101-G-T ***
58840778-T-C 56750093-A-G ***
58840810-C-T 56750061-G-A ***
58842016-T-C 56748855-A-G ***
28417144-G-A 26270997-G-A P1_gr2 ***
28261782-A-G 26115635-A-G P1_b4 ***
58844658-C-T 56746213-G-A ***
27915781-C-A 25769634-C-A P1_Y2 ***
27809198-G-A 25663051-G-A P1_Y2 ***
27810760-T-G 25664613-T-G P1_Y2 ***
27834485-C-A 25688338-C-A P1_Y2 ***
27841013-G-A 25694866-G-A P1_Y2 ***
27841567-C-T 25695420-C-T P1_Y2 ***
27861869-G-T 25715722-G-T P1_Y2 ***
27883941-G-T 25737794-G-T P1_Y2 ***
27935160-A-T 25789013-A-T P1_Y2 ***
28253372-G-A 26107225-G-A P1_b4 ***
28019930-G-A 25873783-G-A P1_Y2 ***
28076608-C-T 25930461-C-T P1_Y2 ***
28118503-G-A 25972356-G-A P1_b4 ***
28120115-A-T 25973968-A-T P1_b4 ***
28155091-T-C 26008944-T-C P1_b4 ***
28168786-G-A 26022639-G-A P1_b4 ***
28190648-A-G 26044501-A-G P1_b4 ***
28191811-C-A 26045664-C-A P1_b4 ***
58842075-A-C 56748796-T-G ***
58844676-C-T 56746195-G-A ***
3550573-TCA-CC 3682532-TCA-CC ***
6694444-C-CT 6826403-C-CT 20×T***
58901239-T-G 56689632-A-C ***
58907099-C-T 56683772-G-A ***
58916331-C-G 56674540-G-C ***
58916433-A-C 56674438-T-G ***
58999124-T-C 56852977-T-C ***
13471860-TT-CTC 11316184-TT-CTC ***
22287292-CA-AT 20125406-CA-AT DYZ19 ***
13535681-A-ATG 11380005-A-ATG 9×TG***
58899218-G-A 56691653-C-T ***
5387429-TC-T 5519388-TC-T ***
5571890-CT-C 5703849-CT-C 16×T***
4830412-C-CT 4962371-C-CT 13×T***
13459496-TTC-ATT 11303820-TTC-ATT ***
28747702-TTCA-T 26601555-TTCA-T ***
5253170-C-CT 5385129-C-CT 23×T***
3131168-A-AGATT 3263127-A-AGATT ***
58899798-G-C 56691073-C-G ***
58892829-T-G 56698042-A-C ***
58846400-C-T 56744471-G-A ***
58859644-T-A 56731227-A-T ***
58855310-T-C 56735561-A-G ***
58855315-T-C 56735556-A-G ***
58855318-C-A 56735553-G-T ***
58855320-T-C 56735551-A-G ***
58855327-C-A 56735544-G-T ***
58855340-T-C 56735531-A-G ***
58856569-T-G 56734302-A-C ***
58861745-A-C 56729126-T-G ***
58890644-T-A 56700227-A-T ***
58862532-T-A 56728339-A-T ***
58862549-G-T 56728322-C-A ***
58863129-A-T 56727742-T-A ***
58863881-C-T 56726990-G-A ***
58865458-G-T 56725413-C-A ***
58867146-G-T 56723725-C-A ***
58876802-T-A 56714069-A-T ***
58887653-A-G 56703218-T-C ***
22360322-G-T 20198436-G-T DYZ19 ***
22283232-A-G 20121346-A-G DYZ19 ***
22360321-A-T 20198435-A-T DYZ19 ***
6252817-C-T 6384776-C-T IR3_Dst ***
5430807-T-A 5562766-T-A ***
5430808-C-A 5562767-C-A 25×A***
5785652-G-A 5917611-G-A ***
5813484-C-T 5945443-C-T ***
6041333-G-T 6173292-G-T ***
6089624-A-T 6221583-A-T ***
6150412-G-T 6282371-G-T IR3_Dst ***
6310594-C-A 6442553-C-A IR3_Dst ***
5378169-T-G 5510128-T-G ***
6311649-G-T 6443608-G-T IR3_Dst ***
6312675-G-A 6444634-G-A IR3_Dst ***
6558242-C-A 6690201-C-A ***
6559699-G-T 6691658-G-T ***
6565437-T-A 6697396-T-A ***
6713136-G-C 6845095-G-C ***
7001973-G-T 7133932-G-T ***
5378176-C-A 5510135-C-A ***
5378158-T-C 5510117-T-C ***
7474934-C-T 7606893-C-T IR1_L ***
3561455-T-C 3693414-T-C ***
22341375-G-T 20179489-G-T DYZ19 ***
22341305-C-A 20179419-C-A DYZ19 ***
2877738-G-A 3009697-G-A ***
2922121-G-T 3054080-G-T ***
3512034-G-T 3643993-G-T ***
3534589-C-T 3666548-C-T ***
3536744-G-T 3668703-G-T ***
4118710-T-A 4250669-T-A ***
5235464-G-T 5367423-G-T ***
4220850-C-T 4352809-C-T ***
4619463-C-T 4751422-C-T ***
4699174-A-G 4831133-A-G ***
4726153-C-A 4858112-C-A ***
4794938-C-T 4926897-C-T ***
4822765-C-A 4954724-C-A ***
5231926-G-T 5363885-G-T ***
7118160-G-A 7250119-G-A ***
7966634-C-G 8098593-C-G ***
22346845-A-C 20184959-A-C DYZ19 ***
13341563-C-T 11185887-C-T ***
10037230-A-G 10199621-A-G ***
10047233-C-A 10209624-C-A ***
13114882-T-C 10604368-T-C ***
13254191-C-T 11098515-C-T ***
13254604-T-G 11098928-T-G ***
13261315-C-T 11105639-C-T ***
13311796-C-T 11156120-C-T ***
13461066-G-A 11305390-G-A ***
10033766-G-A 10196157-G-A ***
13462150-T-G 11306474-T-G ***
13466482-G-A 11310806-G-A ***
13470495-G-A 11314819-G-A ***
13470557-C-A 11314881-C-A ***
13470558-C-T 11314882-C-T ***
13470561-T-A 11314885-T-A ***
13470564-C-G 11314888-C-G ***
10033910-G-C 10196301-G-C ***
9976682-A-T 10139073-A-T ***
8213903-A-G 8345862-A-G ***
9577591-C-T 9739982-C-T IR3_Prx ***
8321802-G-T 8453761-G-T ***
8786123-T-G 8918082-T-G ***
9200079-A-T 9362470-A-T ***
9200152-C-A 9362543-C-A ***
9351221-C-A 9513612-C-A ***
9472405-A-T 9634796-A-T ***
9545048-A-T 9707439-A-T IR3_Prx ***
9623662-A-C 9786053-A-C IR3_Prx ***
9976681-G-T 10139072-G-T ***
9699663-C-A 9862054-C-A IR3_Prx ***
9782352-A-T 9944743-A-T ***
9784304-G-T 9946695-G-T ***
9804531-T-A 9966922-T-A ***
9890362-A-G 10052753-A-G ***
9910803-T-G 10073194-T-G ***
9911018-C-T 10073409-C-T ***
5404762-C-T 5536721-C-T ***
22499876-G-T 20337990-G-T DYZ19 ***
13470588-C-A 11314912-C-A ***
24387108-C-A 22240961-C-A ***
22505127-A-G 20343241-A-G DYZ19 ***
5224862-A-G 5356821-A-G ***
13261588-T-C 11105912-T-C ***
13470522-G-A 11314846-G-A ***
16904731-A-AGT 14792851-A-AGT 20×GT***
17275763-G-GAAGGA 15163883-G-GAAGGA ***
22322768-A-C 20160882-A-C DYZ19 ***
27484258-ATCTTTCTT-A 25338111-ATCTTTCTT-A P1_Y2 19×TCTT***
28008591-C-A 25862444-C-A P1_Y2 11×A***
58906054-T-C 56684817-A-G ***
58999272-A-C 56853125-A-C ***
13470507-G-T 11314831-G-T ***
20332069-T-A 18170183-T-A P5_Dst ***
22332915-A-T 20171029-A-T DYZ19 ***
58876979-G-C 56713892-C-G ***
22333380-C-G 20171494-C-G DYZ19 ***
5229600-CT-C 5361559-CT-C 13×T***
4389597-C-CT 4521556-C-CT 15×T***
22322368-C-T 20160482-C-T DYZ19 ***
13258251-GAC-TA 11102575-GAC-TA ***
14407185-T-C 12286483-T-C A7241 ***
22360342-G-C 20198456-G-C DYZ19 ***
22360334-CGAA-AGAC 20198448-CGAA-AGAC DYZ19 ***
58846274-C-T 56744597-G-A ***
22504690-C-A 20342804-C-A DYZ19 ***
19753954-AT-A 17642074-AT-A P5_Prx 15×T***
13445465-CA-GG 11289789-CA-GG ***
22293342-TT-GA 20131456-TT-GA DYZ19 ***
22292005-C-T 20130119-C-T DYZ19 ***
58910951-G-T 56679920-C-A ***
22297736-T-A 20135850-T-A DYZ19 ***
24388090-A-ATC 22241943-A-ATC ***
22234939-C-A 20073053-C-A DYZ19 ***
15290982-C-T 13179081-C-T 17×T***
5486876-C-A 5618835-C-A 21×A***
3432966-TTATA-T 3564925-TTATA-T 10×TA***
5477636-C-A 5609595-C-A ***
22223821-G-T 20061935-G-T DYZ19 ***
22366077-T-C 20204191-T-C DYZ19 ***
20084617-A-T 17972737-A-T P5_Dst ***
58846435-C-T 56744436-G-A ***
58971885-T-TGTAC 56825738-T-TGTAC ***
58833554-G-A 56757317-C-T ***
21940037-C-CATAT 19778151-C-CATAT 22×AT***
22431581-A-T 20269695-A-T DYZ19 ***
13489132-CTGGC-ACGGT 11333456-CTGGC-ACGGT ***
13488324-C-T 11332648-C-T ***
20084826-A-T 17972946-A-T P5_Dst ***
58856537-A-T 56734334-T-A ***
20084916-A-T 17973036-A-T P5_Dst ***
27586161-A-T 25440014-A-T P1_Y2 ***
22300885-C-A 20138999-C-A DYZ19 ***
9075188-C-T 9237579-C-T 20×T***
58910759-C-T 56680112-G-A ***
58874709-C-G 56716162-G-C ***
58886938-T-G 56703933-A-C ***
58860578-C-G 56730293-G-C ***
26310780-C-T 24164633-C-T P1_Y1 ***
5036583-CATAT-C 5168542-CATAT-C 27×AT***
13486822-CAGT-AAGG 11331146-CAGT-AAGG ***
13488362-C-A 11332686-C-A ***
22234967-G-A 20073081-G-A DYZ19 ***
22422143-G-A 20260257-G-A DYZ19 ***
28602532-A-G 26456385-A-G ***
58830228-A-C 56760643-T-G ***
13203875-CAT-GAG 11048199-CAT-GAG ***
13472473-ACCCTGGC-CCCTTG 11316797-ACCCTGGC-CCCTTG ***
13261324-A-G 11105648-A-G ***
6226038-TTCTA-T 6357997-TTCTA-T IR3_Dst ***
20426270-C-G 18264384-C-G P5_Dst ***
58853569-ATTCCA-T 56737297-TGGAAT-A ***
22300886-C-T 20139000-C-T DYZ19 ***
13742278-T-C 11586602-T-C ***
22229450-G-A 20067564-G-A DYZ19 ***
27528893-C-A 25382746-C-A P1_Y2 ***
58889128-C-G 56701743-G-C ***
13470568-C-G 11314892-C-G ***
13470594-G-A 11314918-G-A ***
22358359-C-G 20196473-C-G DYZ19 ***
20252697-C-A 18090811-C-A P5_Dst ***
20084922-C-T 17973042-C-T P5_Dst ***
20101599-C-A 17989719-C-A P5_Dst ***
20101851-A-G 17989971-A-G P5_Dst ***
20105156-C-A 17993276-C-A P5_Dst ***
20243382-A-G 18081496-A-G P5_Dst ***
20252488-C-T 18090602-C-T P5_Dst ***
20252646-C-A 18090760-C-A P5_Dst ***
20252729-G-A 18090843-G-A P5_Dst ***
20084859-A-T 17972979-A-T P5_Dst ***
20252739-T-A 18090853-T-A P5_Dst ***
20252786-C-A 18090900-C-A P5_Dst ***
20329784-C-T 18167898-C-T P5_Dst ***
20331818-T-A 18169932-T-A P5_Dst ***
20335654-A-G 18173768-A-G P5_Dst ***
20350592-G-T 18188706-G-T P5_Dst ***
20359132-A-C 18197246-A-C P5_Dst ***
20084870-A-T 17972990-A-T P5_Dst ***
20084855-G-T 17972975-G-T P5_Dst ***
20568364-C-A 18406478-C-A P5_Dst ***
19853700-G-T 17741820-G-T P5_Prx ***
19757253-T-G 17645373-T-G P5_Prx ***
19775476-C-T 17663596-C-T P5_Prx ***
19775485-C-T 17663605-C-T P5_Prx ***
19792043-G-T 17680163-G-T P5_Prx ***
19799261-T-A 17687381-T-A P5_Prx ***
19828171-G-A 17716291-G-A P5_Prx ***
19853624-G-T 17741744-G-T P5_Prx ***
19967620-G-T 17855740-G-T P5_Prx ***
20084803-G-T 17972923-G-T P5_Dst ***
19987870-C-A 17875990-C-A P5_Prx ***
20084344-C-T 17972464-C-T P5_Dst ***
20084637-A-T 17972757-A-T P5_Dst ***
20084661-C-T 17972781-C-T P5_Dst ***
20084717-G-T 17972837-G-T P5_Dst ***
20084777-A-T 17972897-A-T P5_Dst ***
20084799-C-T 17972919-C-T P5_Dst ***
20453594-A-T 18291708-A-T P5_Dst ***
20568724-A-T 18406838-A-T P5_Dst ***
19330164-C-T 17218284-C-T ***
22332948-A-T 20171062-A-T DYZ19 ***
22283221-T-C 20121335-T-C DYZ19 ***
13724013-G-C 11568337-G-C ***
22283234-A-T 20121348-A-T DYZ19 ***
22283238-G-T 20121352-G-T DYZ19 ***
22311209-C-T 20149323-C-T DYZ19 ***
22320858-T-G 20158972-T-G FGC44708 DYZ19 ***
22330239-T-C 20168353-T-C DYZ19 ***
22338697-T-G 20176811-T-G DYZ19 ***
22283212-T-A 20121326-T-A DYZ19 ***
22341292-G-A 20179406-G-A DYZ19 ***
22346841-T-A 20184955-T-A DYZ19 ***
22346844-A-C 20184958-A-C DYZ19 ***
22346904-C-G 20185018-C-G DYZ19 ***
22354151-C-T 20192265-C-T DYZ19 ***
22356684-T-G 20194798-T-G DYZ19 ***
22358194-A-T 20196308-A-T DYZ19 ***
22283213-A-G 20121327-A-G DYZ19 ***
22258028-G-T 20096142-G-T DYZ19 ***
20570038-C-T 18408152-C-T P5_Dst ***
21171585-G-C 19009699-G-C ***
20574024-G-T 18412138-G-T P5_Dst ***
20663594-A-G 18501708-A-G P4_Prx ***
20907427-G-T 18745541-G-T P4_Dst ***
20907973-C-A 18746087-C-A P4_Dst ***
20967437-C-A 18805551-C-A P4_Dst ***
20970174-T-C 18808288-T-C P4_Dst ***
21056492-T-C 18894606-T-C ***
21511750-A-C 19349864-A-C ***
22235008-T-A 20073122-T-A DYZ19 ***
21535738-C-A 19373852-C-A ***
21630225-C-T 19468339-C-T ***
21914187-T-A 19752301-T-A ***
21914207-C-A 19752321-C-A ***
21914214-A-G 19752328-A-G ***
21929678-G-T 19767792-G-T ***
21997014-C-A 19835128-C-A ***
19426856-A-T 17314976-A-T ***
19330089-G-A 17218209-G-A ***
13470596-G-A 11314920-G-A ***
13726799-G-T 11571123-G-T ***
13563376-G-T 11407700-G-T ***
13593712-T-A 11438036-T-A ***
13600600-C-A 11444924-C-A ***
13606668-G-A 11450992-G-A ***
13606671-T-A 11450995-T-A ***
13645333-A-T 11489657-A-T ***
13726798-G-T 11571122-G-T ***
13740786-T-G 11585110-T-G ***
13548959-A-G 11393283-A-G ***
13740798-G-C 11585122-G-C ***
13744283-A-T 11588607-A-T ***
13833483-A-G 11712777-A-G ***
14058898-G-A 11938192-G-A YFS1386713 ***
14261239-G-A 12140533-G-A ***
14390993-G-T 12270289-G-T ***
14549183-G-T 12437384-G-T ***
13549002-A-G 11393326-A-G ***
13489329-C-G 11333653-C-G ***
14565118-A-C 12453318-A-C ***
13489132-C-A 11333456-C-A ***
13470619-A-T 11314943-A-T ***
13470627-C-G 11314951-C-G ***
13488311-C-A 11332635-C-A ***
13488325-G-A 11332649-G-A ***
13488328-C-G 11332652-C-G ***
13488365-G-A 11332689-G-A ***
13488369-C-T 11332693-C-T ***
13489133-T-C 11333457-T-C ***
13489310-G-T 11333634-G-T ***
13489160-C-G 11333484-C-G ***
13489202-C-T 11333526-C-T ***
13489205-T-A 11333529-T-A ***
13489206-C-A 11333530-C-A ***
13489215-C-A 11333539-C-A ***
13489233-C-A 11333557-C-A ***
13489309-G-A 11333633-G-A ***
14565116-T-C 12453316-T-C ***
14656116-G-T 12544181-G-T ***
19330088-T-G 17218208-T-G ***
18761920-G-A 16650040-G-A ***
18297929-A-C 16186049-A-C P6_Prx ***
18297951-A-T 16186071-A-T P6_Prx ***
18298017-C-T 16186137-C-T P6_Prx ***
18329261-C-T 16217381-C-T P6_Prx ***
18443978-G-T 16332098-G-T P6_Dst ***
18540940-A-C 16429060-A-C ***
18734309-G-A 16622429-G-A ***
18846334-C-T 16734454-C-T ***
18228928-G-T 16117048-G-T ***
19014536-C-T 16902656-C-T ***
19083771-G-A 16971891-G-A ***
19085596-T-C 16973716-T-C ***
19098834-C-A 16986954-C-A ***
19178198-G-T 17066318-G-T ***
19187481-G-T 17075601-G-T ***
19297659-G-T 17185779-G-T ***
18231188-A-C 16119308-A-C ***
18135740-A-T 16023860-A-T ***
14661304-T-C 12549369-T-C ***
15629135-G-T 13517255-G-T ***
14725907-G-C 12613975-G-C ***
14737216-C-T 12625284-C-T ***
14989081-T-A 12877147-T-A ***
15117091-A-C 13005178-A-C ***
15141197-G-A 13029284-G-A ***
15300791-C-A 13188890-C-A ***
15300792-T-C 13188891-T-C ***
15630762-T-C 13518882-T-C ***
17988039-C-A 15876159-C-A P7_Prx ***
16067735-C-A 13955855-C-A ***
16498505-G-T 14386625-G-T ***
16720114-G-T 14608234-G-T ***
16738981-T-G 14627101-T-G ***
16834770-A-G 14722890-A-G ***
16997367-A-G 14885487-A-G ***
17085294-T-C 14973414-T-C ***
17854677-G-A 15742797-G-A ***
59008780-TTTA-T 56862633-TTTA-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Gray1325141111-13121212131429179-1011112516183015-16-16-17111119-221616201738-39121211915-1681010810101221-231610121216812252013121113111112123515916122426201211121211913121011113012132413101021151913241713152412231810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: XFEFM*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs53
Variant counts last updated 2018-04-27 00:01:13.

* BED data not available. Using default values.


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