Daly

Other: GS0040392
MDKA Birth: Ireland
WGS by Complete Genomics

Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z46375 > DF106 > DF104 > DF105 > ZS8379

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STROther
GS0040392
59002944-G-TA 56856797-G-TA +
13666524-T-C 11510848-T-C +
13651102-A-T 11495426-A-T +
13651106-AC-GT 11495430-AC-GT +
13658806-CGG-GGA 11503130-CGG-GGA +
13658826-G-T 11503150-G-T +
13658835-TCG-ACT 11503159-TCG-ACT +
13666282-C-G 11510606-C-G +
13666501-TAA-GAT 11510825-TAA-GAT +
13666509-TGG-CGA 11510833-TGG-CGA +
13666514-GGC-TCG 11510838-GGC-TCG +
13671058-ATT-CTG 11515382-ATT-CTG +
13651087-TG-AC 11495411-TG-AC +
13671073-A-T 11515397-A-T +
13671085-T-G 11515409-T-G +
13675998-GAGTGC-G 11520322-GAGTGC-G +
13676006-TAGTGTGGAAA-T 11520330-TAGTGTGGAAA-T +
13676023-GAA-AGT 11520347-GAA-AGT +
13676030-ATG-GTA 11520354-ATG-GTA +
13676037-C-G 11520361-C-G +
13676051-C-A 11520375-C-A +
13677221-A-C 11521545-A-C +
13680752-A-C 11525076-A-C +
13651091-A-G 11495415-A-G +
13651071-ATGT-CTCG 11495395-ATGT-CTCG +
13800852-TC-AT 11680146-TC-AT +
13642275-T-C 11486599-T-C +
13467653-AG-GC 11311977-AG-GC +
13469726-G-T 11314050-G-T +
13469733-CA-C 11314057-CA-C +
13469751-G-A 11314075-G-A +
13469759-A-G 11314083-A-G +
13476124-G-C 11320448-G-C +
13477494-A-G 11321818-A-G +
13478387-AG-CA 11322711-AG-CA +
13487462-TTC-GTG 11331786-TTC-GTG +
13642473-A-T 11486797-A-T +
13651061-ATGCAGTA-GAGGAATG 11495385-ATGCAGTA-GAGGAATG +
13645214-A-G 11489538-A-G +
13645226-G-C 11489550-G-C +
13645402-A-T 11489726-A-T +
13650354-A-G 11494678-A-G +
13650358-G-T 11494682-G-T +
13650367-TCGAAC-AGATAT 11494691-TCGAAC-AGATAT +
13650375-A-C 11494699-A-C +
13650384-A-C 11494708-A-C +
13650398-A-T 11494722-A-T +
13651056-A-C 11495380-A-C +
13687665-AGA-TGG 11531989-AGA-TGG +
13800859-G-T 11680153-G-T +
13466229-CCA-ACC 11310553-CCA-ACC +
13848910-A-AC 11728204-A-AC +
13842416-AA-CG 11721710-AA-CG +
13843438-T-G 11722732-T-G +
13843443-T-A 11722737-T-A +
13843570-G-C 11722864-G-C +
13843574-G-A 11722868-G-A ZS6780 +
13846090-G-T 11725384-G-T +
13848877-A-G 11728171-A-G +
13848882-T-G 11728176-T-G +
13848891-TG-GC 11728185-TG-GC +
13848919-ATT-CTG 11728213-ATT-CTG +
13842398-GAA-CAG 11721692-GAA-CAG +
13848925-TGGAT-CAAAA 11728219-TGGAT-CAAAA +
13848932-G-A 11728226-G-A +
13848936-A-C 11728230-A-C +
13848951-GGAATG-CGTACA 11728245-GGAATG-CGTACA +
13848960-T-C 11728254-T-C +
13848965-TGG-AGA 11728259-TGG-AGA +
13848975-T-C 11728269-T-C +
13848987-G-C 11728281-G-C +
13849820-T-A 11729114-T-A +
13849826-T-A 11729120-T-A +
13842413-G-A 11721707-G-A +
13842386-A-T 11721680-A-T +
13800863-T-A 11680157-T-A +
13813660-G-A 11692954-G-A +
13800873-AC-GG 11680167-AC-GG +
13801443-TTG-GTA 11680737-TTG-GTA +
13801539-G-A 11680833-G-A +
13801547-TGG-CGA 11680841-TGG-CGA +
13811500-T-G 11690794-T-G +
13813270-A-T 11692564-A-T +
13813277-T-G 11692571-T-G +
13813282-T-G 11692576-T-G +
13813287-GAA-CAG 11692581-GAA-CAG +
13813302-G-A 11692596-G-A +
13813679-GT-TC 11692973-GT-TC +
13841246-GA-TG 11720540-GA-TG +
13815573-G-A 11694867-G-A +
13815583-G-A 11694877-G-A +
13822033-G-C 11701327-G-C +
13822977-G-C 11702271-G-C +
13835943-A-G 11715237-A-G +
13835954-G-A 11715248-G-A +
13839181-A-C 11718475-A-C +
13839597-A-T 11718891-A-T +
13839669-T-A 11718963-T-A +
13840112-C-CATGGAGATTAATGGAATTGAATGGAGACTA 11719406-C-CATGGAGATTAATGGAATTGAATGGAGACTA +
13466234-A-G 11310558-A-G +
13466219-GCT-ATG 11310543-GCT-ATG +
13851006-T-C 11730300-T-C +
10044000-T-G 10206391-T-G +
10031944-G-A 10194335-G-A BY83184 Y+
10032317-A-C 10194708-A-C Y+
10032322-ACA-GCC 10194713-ACA-GCC +
10032327-TGCGCCCGC-CGTGACTGG 10194718-TGCGCCCGC-CGTGACTGG +
10033106-C-T 10195497-C-T Y+
10035104-A-G 10197495-A-G +
10037556-A-C 10199947-A-C +
10037560-A-C 10199951-A-C +
10037564-C-T 10199955-C-T +
10044406-C-G 10206797-C-G +
10031907-ATG-GTT 10194298-ATG-GTT +
10061804-C-G 10224195-C-G +
10061813-A-G 10224204-A-G +
10061816-A-C 10224207-A-C +
10061824-C-G 10224215-C-G +
10062983-G-C 10225374-G-C +
10062987-T-A 10225378-T-A +
10062990-AT-GG 10225381-AT-GG +
10063001-TCG-ACA 10225392-TCG-ACA +
10063006-G-C 10225397-G-C +
10065295-C-G 10227686-C-G +
10031919-CA-TG 10194310-CA-TG +
10031888-C-T 10194279-C-T Y+
10065305-CA-TC 10227696-CA-TC +
10031580-C-CG 10193971-C-CG +
10029848-A-G 10192239-A-G Y+
10029868-C-G 10192259-C-G Y+
10029921-A-G 10192312-A-G Y+
10029926-A-C 10192317-A-C Y+
10029985-T-G 10192376-T-G Y+
10030003-TG-CC 10192394-TG-CC +
10031451-T-C 10193842-T-C Y+
10031486-ATT-CTC 10193877-ATT-CTC +
10031502-G-A 10193893-G-A Y+
10031565-TG-CA 10193956-TG-CA +
10031596-TG-CA 10193987-TG-CA +
10031752-T-C 10194143-T-C Y+
10031604-T-C 10193995-T-C Y+
10031633-AT-GC 10194024-AT-GC +
10031637-T-C 10194028-T-C Y+
10031643-A-G 10194034-A-G Y+
10031649-C-A 10194040-C-A Y+
10031666-AGGGC-A 10194057-AGGGC-A +
10031672-GCCATCCACCTCAC-G 10194063-GCCATCCACCTCAC-G +
10031693-AGA-GGG 10194084-AGA-GGG +
10031717-ACA-GCC 10194108-ACA-GCC +
10031745-A-G 10194136-A-G Y+
10065301-AG-GC 10227692-AG-GC +
10068427-G-T 10230818-G-T +
13466216-C-T 11310540-C-T +
13396342-T-C 11240666-T-C +
13133082-G-T 10622568-G-T +
13133085-A-C 10622571-A-C +
13133089-ATG-GTT 10622575-ATG-GTT +
13134305-C-T 10623791-C-T +
13276763-G-T 11121087-G-T +
13300850-T-G 11145174-T-G +
13337675-A-T 11181999-A-T +
13361028-G-A 11205352-G-A +
13379063-A-G 11223387-A-G +
13448649-C-G 11292973-C-G +
13133069-CCTT-GATC 10622555-CCTT-GATC +
13448675-A-C 11292999-A-C +
13448688-C-A 11293012-C-A +
13463011-C-T 11307335-C-T +
13463046-TAT-CAG 11307370-TAT-CAG +
13465956-C-A 11310280-C-A +
13465961-G-A 11310285-G-A +
13465969-A-T 11310293-A-T +
13465977-CA-GC 11310301-CA-GC +
13466177-G-C 11310501-G-C +
13466181-T-G 11310505-T-G +
13133075-A-C 10622561-A-C +
13131015-G-A 10620501-G-A +
10068440-C-T 10230831-C-T +
10072220-AAC-TCT 10234611-AAC-TCT +
10068448-T-C 10230839-T-C +
10068729-C-A 10231120-C-A +
10068742-C-G 10231133-C-G +
10069243-C-A 10231634-C-A +
10071566-T-A 10233957-T-A +
10071573-GCA-AGT 10233964-GCA-AGT +
10071578-G-T 10233969-G-T +
10071589-TTAA-CTCT 10233980-TTAA-CTCT +
10072042-A-T 10234433-A-T +
10072062-T-C 10234453-T-C +
10072259-G-T 10234650-G-T +
13112763-A-G 10602249-A-G +
10072262-AGAG-GAAA 10234653-AGAG-GAAA +
10072269-GAA-AAG 10234660-GAA-AAG +
10072487-C-G 10234878-C-G +
10072492-C-T 10234883-C-T +
13801867-A-C 11681161-A-C S14510 +
10082622-A-T 10245013-A-T +
10082628-GG-TT 10245019-GG-TT +
10082856-GATTCT-CACTGC 10245247-GATTCT-CACTGC +
10082867-AAG-CTA 10245258-AAG-CTA +
10082872-A-T 10245263-A-T +
13850243-AC-CA 11729537-AC-CA +
13851695-ACA-TCG 11730989-ACA-TCG +
10029837-C-G 10192228-C-G Y+
58985079-G-A 56838932-G-A +
28799113-G-C 26652966-G-C +
58819824-A-T 56771047-T-A +
58913583-G-C 56677288-C-G +
58973416-T-A 56827269-T-A +
58973424-AAGTT-GATTC 56827277-AAGTT-GATTC +
58973433-TCA-CCT 56827286-TCA-CCT +
58976184-C-A 56830037-C-A +
58978034-C-G 56831887-C-G +
58978612-A-T 56832465-A-T +
58985086-T-G 56838939-T-G +
28798910-G-A 26652763-G-A +
58985090-C-A 56838943-C-A +
58985100-A-C 56838953-A-C +
58985888-C-G 56839741-C-G +
58985893-T-C 56839746-T-C +
58985900-AC-GG 56839753-AC-GG +
58985906-T-A 56839759-T-A +
58986097-C-T 56839950-C-T +
58987208-TG-CA 56841061-TG-CA +
58987214-A-T 56841067-A-T +
58987217-T-G 56841070-T-G +
28799108-T-C 26652961-T-C +
28358343-CA-C 26212196-CA-C P1_gr2 8×A+
58987227-C-T 56841080-C-T +
26951070-A-G 24804923-A-G P1_r3 +
25142869-G-GC 22996722-G-GC FGCLR599 g1 +
25202407-T-A 23056260-T-A g1 +
25328923-C-T 23182776-C-T P2_r1 +
25350135-G-C 23203988-G-C P2_r1 +
25359692-A-G 23213545-A-G P2_r2 +
25388901-T-C 23242754-T-C P2_r2 +
25617956-A-G 23471809-A-G P1_gr1 +
26269231-A-G 24123084-A-G P1_Y1 +
26846893-C-CA 24700746-C-CA P1_r3 +
27206218-C-CTGTGCATGTGTGAGAATGACAAT 25060071-C-CTGTGCATGTGTGAGAATGACAAT P1_g3 +
28293233-G-GC 26147086-G-GC P1_b4 +
27290634-GT-G 25144487-GT-G P1_g3 +
27392284-A-G 25246137-A-G FGC61343 P1_g3 +
27443549-G-GC 25297402-G-GC FGCLR204 P1_Y2 +
27565890-T-TG 25419743-T-TG FGCLR391 P1_Y2 +
27616494-C-CT 25470347-C-CT P1_Y2 9×T+
27670052-A-C 25523905-A-C P1_Y2 +
27777270-TCTTTCTGGATA-T 25631123-TCTTTCTGGATA-T P1_Y2 +
27859008-A-T 25712861-A-T P1_Y2 +
27870269-A-G 25724122-A-G FGC61346 P1_Y2 +
28281362-T-G 26135215-T-G P1_b4 +
58987222-G-A 56841075-G-A +
58987231-G-A 56841084-G-A +
24549679-C-CG 22403532-C-CG P3_t2 +
10027351-AA-G 10189742-AA-G +
10032842-C-ACCCCCCCTT 10195233-C-ACCCCCCCTT +
10022338-GC-TCATTA 10184729-GC-TCATTA +
10019850-GATGG-AAACGA 10182241-GATGG-AAACGA +
10071583-C-AG 10233974-C-AG +
13677231-TTT-ATGGAATCATATA 11521555-TTT-ATGGAATCATATA +
14491300-CCCTTGGT-TCGAGAGAA +
10033113-AGGC-CGGTGT 10195504-AGGC-CGGTGT +
59002947-G-AAAATTTCA 56856800-G-AAAATTTCA +
10031505-AT-GCC 10193896-AT-GCC +
10005431-AGT-GC 10167822-AGT-GC +
59001381-ATAA-TTTT 56855234-ATAA-TTTT +
13671076-GATTC-AACG 11515400-GATTC-AACG +
14491311-G-ACT +
13801456-ATG-TTTC 11680750-ATG-TTTC +
10015657-CTGCTGC-G 10178048-CTGCTGC-G +
13848943-AAC-TA 11728237-AAC-TA +
58985082-CG-TTA 56838935-CG-TTA +
13650840-ATT-TA 11495164-ATT-TA +
14491321-T-CACCA +
58997643-TGGGTA-GAGCT 56851496-TGGGTA-GAGCT +
58993774-CT-ACC 56847627-CT-ACC +
9989126-C-TTCT 10151517-C-TTCT +
58997392-TTA-CTG 56851245-TTA-CTG +
58989274-T-A 56843127-T-A +
58993756-CACTGGCA-AATTAACT 56847609-CACTGGCA-AATTAACT +
58989279-A-C 56843132-A-C +
58989286-A-T 56843139-A-T +
58989289-T-A 56843142-T-A +
58989294-G-A 56843147-G-A +
58993686-A-C 56847539-A-C +
58993692-GG-CA 56847545-GG-CA +
58993698-T-G 56847551-T-G +
58993716-G-A 56847569-G-A +
58993721-CCT-TCC 56847574-CCT-TCC +
58993747-CTC-ATG 56847600-CTC-ATG +
58993779-CC-TA 56847632-CC-TA +
58997382-TGACA-CAATG 56851235-TGACA-CAATG +
58993786-AAGCA-CATCC 56847639-AAGCA-CATCC +
58993821-C-T 56847674-C-T +
58993829-G-A 56847682-G-A +
58993832-TGA-CTT 56847685-TGA-CTT +
58997339-AC-GG 56851192-AC-GG +
58997348-ACTA-CCAC 56851201-ACTA-CCAC +
58997355-TCT-CCA 56851208-TCT-CCA +
58997363-T-C 56851216-T-C +
58997372-GT-G 56851225-GT-G +
58997378-T-A 56851231-T-A +
24766139-T-C 22619992-T-C FGC61341 P3_b2 +
24303293-A-G 22157146-A-G ZS1896 P3_t1 +
13852370-T-C 11731664-T-C +
15938252-G-A 13826372-G-A YY+
14719578-T-TA 12607646-T-TA 19×A+
15676834-C-T 13564954-C-T F20018 Y+
15779595-C-T 13667715-C-T YY+
15807798-T-G 13695918-T-G Y+
15807806-G-T 13695926-G-T Y+
15808676-T-C 13696796-T-C Y+
15808804-G-A 13696924-G-A YY+
15808812-G-C 13696932-G-C YY+
15888161-G-C 13776281-G-C Y+
15942113-T-TAAAGCAAAAGCTAAGGTAAAGTG 13830233-T-TAAAGCAAAAGCTAAGGTAAAGTG +
14491314-GAG-CTC +
16081175-C-T 13969295-C-T Y+
16105607-G-C 13993727-G-C P8_Prx +
16207613-C-T 14095733-C-T FGC45767 Y+
16661913-G-GTCCTGGCGTGTGCGTGCT 14550033-G-GTCCTGGCGTGTGCGTGCT +
16785455-C-T 14673575-C-T M6969 Y+
17068652-A-C 14956772-A-C Y+
17182941-G-T 15071061-G-T Y+
17268186-A-G 15156306-A-G Y+
17619294-C-T 15507414-C-T Y+
17697595-T-G 15585715-T-G Y+
14491318-G-GC +
14491296-TC-GA +
18230919-T-C 16119039-T-C +
13859600-GAAT-AATA 11738894-GAAT-AATA +
13854317-CC-TG 11733611-CC-TG +
13855102-G-A 11734396-G-A +
13855107-GA-TT 11734401-GA-TT +
13855120-A-G 11734414-A-G +
13855129-A-C 11734423-A-C +
13856537-G-T 11735831-G-T +
13857000-C-T 11736294-C-T +
13857008-A-T 11736302-A-T +
13857017-G-A 11736311-G-A +
13857020-T-G 11736314-T-G +
13866566-A-T 11745860-A-T +
14399061-AAA-GAG 12278357-AAA-GAG +
13866576-T-C 11745870-T-C +
13866988-T-A 11746282-T-A +
13868530-G-T 11747824-G-T +
13869337-ATG-GTA 11748631-ATG-GTA +
13869343-T-C 11748637-T-C +
13869349-A-T 11748643-A-T +
13870087-TA-GT 11749381-TA-GT +
13870104-CA-TG 11749398-CA-TG +
14073429-G-C 11952723-G-C YY+
14156755-G-T 12036049-G-T Y+
17819785-C-T 15707905-C-T YY+
18304214-A-AG 16192334-A-AG FGCLR361 P6_Prx +
24299427-T-TG 22153280-T-TG FGCLR759 P3_t1 +
22356775-CC-AT 20194889-CC-AT DYZ19 +
22293309-CAG-TAC 20131423-CAG-TAC DYZ19 +
22293320-G-A 20131434-G-A DYZ19 +
22297134-CA-AG 20135248-CA-AG DYZ19 +
22322668-C-A 20160782-C-A DYZ19 +
22349275-GG-CT 20187389-GG-CT DYZ19 +
22349297-C-A 20187411-C-A DYZ19 +
22354628-AAT-GAG 20192742-AAT-GAG DYZ19 +
22354638-GG-AT 20192752-GG-AT DYZ19 +
22354646-GTCT-TCAA 20192760-GTCT-TCAA DYZ19 +
22424247-T-C 20262361-T-C DYZ19 +
22281837-AG-TA 20119951-AG-TA DYZ19 +
22427287-C-G 20265401-C-G DYZ19 +
22440186-T-C 20278300-T-C DYZ19 +
22441303-C-G 20279417-C-G DYZ19 +
22445825-G-T 20283939-G-T DYZ19 +
22510104-GTG-ATT 20348218-GTG-ATT DYZ19 +
22511140-C-G 20349254-C-G DYZ19 +
22629508-G-A 20467622-G-A Y+
23100409-A-G 20938523-A-G Y+
23694875-TC-T 21532989-TC-T +
24101909-C-T 21955762-C-T FGCLR2 P3_b1 +
22290273-C-T 20128387-C-T DYZ19 +
22278780-G-T 20116894-G-T BY48495 DYZ19 +
18964849-T-G 16852969-T-G YY+
20365237-TTTTCTT-CTCTTTC 18203351-TTTTCTT-CTCTTTC P5_Dst +
19725205-A-AC 17613325-A-AC P5_Prx +
19773774-GC-CT 17661894-GC-CT P5_Prx +
19773784-C-A 17661904-C-A P5_Prx +
19773796-C-A 17661916-C-A P5_Prx +
19774599-AGA-TCT 17662719-AGA-TCT P5_Prx +
19774604-C-G 17662724-C-G P5_Prx +
19774608-AGATAG-GCCAAT 17662728-AGATAG-GCCAAT P5_Prx +
19774617-T-C 17662737-T-C P5_Prx +
19774623-T-C 17662743-T-C P5_Prx +
19774628-G-C 17662748-G-C P5_Prx +
20365246-TAGAAT-CATTCC 18203360-TAGAAT-CATTCC P5_Dst +
22263798-CT-TA 20101912-CT-TA DYZ19 +
20365255-C-G 18203369-C-G P5_Dst +
20365258-AG-GT 18203372-AG-GT P5_Dst +
20388305-T-A 18226419-T-A P5_Dst +
20488263-G-GC 18326377-G-GC P5_Dst +
20995344-T-TG 18833458-T-TG P4_Dst +
22229905-AT-GG 20068019-AT-GG DYZ19 +
22263646-CAC-TAA 20101760-CAC-TAA DYZ19 +
22263654-TACT-GGTG 20101768-TACT-GGTG DYZ19 +
22263779-GGTGTTG-TACGGTT 20101893-GGTGTTG-TACGGTT DYZ19 +
22263793-CAA-AAG 20101907-CAA-AAG DYZ19 +
10029843-A-C 10192234-A-C Y+
10072501-G-C 10234892-G-C +
10029831-A-G 10192222-A-G Y+
9938944-C-G 10101335-C-G Y+
9960720-G-A 10123111-G-A Y+
9962569-CA-TG 10124960-CA-TG +
9962578-AGT-GTG 10124969-AGT-GTG +
9962697-T-G 10125088-T-G Y+
9962714-G-A 10125105-G-A Y+
9962780-G-T 10125171-G-T Y+
9962806-A-G 10125197-A-G Y+
9962810-T-C 10125201-T-C Z4564 Y+
9343987-G-GC 9506378-G-GC +
9957358-C-T 10119749-C-T Y+
9962854-AGCT-GTCG 10125245-AGCT-GTCG +
9963477-A-C 10125868-A-C Y+
9968136-AC-GT 10130527-AC-GT +
9968209-G-GAT 10130600-G-GAT +
9975597-T-C 10137988-T-C Y+
13277830-A-G 11122154-A-G +
9979687-T-A 10142078-T-A Y+
9979690-A-T 10142081-A-T Y+
9979697-A-T 10142088-A-T Y+
9957449-T-G 10119840-T-G S3040 Y+
9956272-C-T 10118663-C-T Y+
9980771-A-AGAAG 10143162-A-AGAAG +
9950419-A-G 10112810-A-G Y+
9990337-T-C 10152728-T-C Z11983 Y+
9946313-C-T 10108704-C-T Y+
9946318-G-T 10108709-G-T Y+
9946336-C-T 10108727-C-T Y+
9987152-C-T 10149543-C-T Y+
9946347-A-G 10108738-A-G Y+
9950396-A-C 10112787-A-C Y+
9950409-T-C 10112800-T-C Y+
10029820-A-G 10192211-A-G BY83161 Y+
9956269-C-A 10118660-C-A Y+
9986031-A-C 10148422-A-C Y+
9984401-A-G 10146792-A-G Y+
9983269-T-A 10145660-T-A Y+
9980608-A-T 10142999-A-T Y+
9980602-C-T 10142993-C-T Y+
9950425-A-G 10112816-A-G Y+
9957278-G-A 10119669-G-A Y+
9950457-A-C 10112848-A-C Y+
9950470-GGGAAAA-AGCAGAG 10112861-GGGAAAA-AGCAGAG +
9979700-G-A 10142091-G-A Y+
9980797-G-A 10143188-G-A Y+
9923945-CA-GG 10086336-CA-GG +
9986278-A-G 10148669-A-G Y+
9985336-G-A 10147727-G-A Y+
9985469-T-C 10147860-T-C Y+
9985475-T-G 10147866-T-G Y+
9985526-A-C 10147917-A-C Y+
9985747-A-ACTGATAAATTCAATTGTATTAAATGTAGAAGCTTTGAT 10148138-A-ACTGATAAATTCAATTGTATTAAATGTAGAAGCTTTGAT +
9986023-AT-GC 10148414-AT-GC +
28050211-T-TTTC 25904064-T-TTTC FGCLR392 P1_Y2 +
9986273-A-C 10148664-A-C Y+
9986338-G-A 10148729-G-A Y+
9985300-A-G 10147691-A-G Y+
9986635-C-A 10149026-C-A Y+
9986641-G-A 10149032-G-A Y+
9986673-A-C 10149064-A-C Y+
9986700-A-G 10149091-A-G BY184358 Y+
9986705-A-T 10149096-A-T Y+
9986728-A-T 10149119-A-T Y+
59002930-C-T 56856783-C-T +
9987084-C-G 10149475-C-G Y+
59002952-T-C 56856805-T-C +
22356817-T-A 20194931-T-A DYZ19 +
9985286-C-T 10147677-C-T F3910 Y+
9980800-T-G 10143191-T-G Y+
9984438-TG-CC 10146829-TG-CC +
9981287-A-C 10143678-A-C Y+
9982348-G-A 10144739-G-A Y+
9982393-A-G 10144784-A-G Y+
9983204-A-C 10145595-A-C Y+
9983306-G-A 10145697-G-A Y+
9983764-G-T 10146155-G-T Z2923 Y+
9983783-A-C 10146174-A-C Y+
9983815-A-C 10146206-A-C Y+
9984433-T-C 10146824-T-C Y+
9996124-G-GA 10158515-G-GA +
22354237-C-CA 20192351-C-CA DYZ19 +
9984818-G-T 10147209-G-T Y+
9984828-G-T 10147219-G-T Y+
9985208-T-C 10147599-T-C Y+
9985211-C-A 10147602-C-A Y+
9985225-G-C 10147616-G-C Y+
9984959-AGG-GGA 10147350-AGG-GGA +
9985241-C-A 10147632-C-A PR1221 Y+
9985283-T-A 10147674-T-A Y+
9205154-G-A 9367545-G-A Z31228 Y+
10005468-A-G 10167859-A-G Y+
10019975-T-G 10182366-T-G Y+
9987166-A-G 10149557-A-G Y+
6255417-T-TG 6387376-T-TG FGCLR540 IR3_Dst +
59002362-C-T 56856215-C-T +
59031595-C-T 56885448-C-T +
7026571-A-G 7158530-A-G Y+
9956790-TG-CA 10119181-TG-CA +
14709276-AC-TG +
28119963-T-G 25973816-T-G FGCLR370 P1_b4 +
18231243-G-T 16119363-G-T +
24567078-G-A 22420931-G-A FGC61344 P3_t2 +
6233064-G-GC 6365023-G-GC FGCLR87 IR3_Dst +
22351269-GT-TC 20189383-GT-TC DYZ19 +
28753337-A-C 26607190-A-C +
24435424-C-G 22289277-C-G Y+
13837420-TC-CT 11716714-TC-CT +
59002632-G-A 56856485-G-A +
9985498-C-T 10147889-C-T Y+
59002627-G-T 56856480-G-T +
4148899-G-T 4280858-G-T +
4227092-TTC-ATT 4359051-TTC-ATT +
6099384-C-CA 6231343-C-CA 17×A+
22351198-AC-TA 20189312-AC-TA DYZ19 +
20331710-G-GGA 18169824-G-GGA P5_Dst +
6117905-G-A 6249864-G-A FGC59429 +
13859575-AAA-CAG 11738869-AAA-CAG +
3592291-C-T 3724250-C-T Y49 +
9171857-T-G 9334248-T-G FGC4723 Z8215 Y+
9946246-A-C 10108637-A-C Y+
9962028-T-C 10124419-T-C Y+
9985634-G-A 10148025-G-A Y+
9988565-C-T 10150956-C-T SA19 Y+
9990124-GA-G 10152515-GA-G +
25890672-G-GC 23744525-G-GC FGCLR365 P1_Y1 +
10027402-T-C 10189793-T-C Y+
13411532-C-G 11255856-C-G +
9302430-A-AC 9464821-A-AC +
10031955-T-C 10194346-T-C Y+
10044173-C-A 10206564-C-A +
10061547-C-A 10223938-C-A +
10063533-G-T 10225924-G-T +
22446667-TGA-ATT 20284781-TGA-ATT DYZ19 +
9992845-A-T 10155236-A-T Y+
22356835-A-AC 20194949-A-AC DYZ19 +
13375994-A-G 11220318-A-G +
27254673-A-C 25108526-A-C P1_g3 +
24932892-A-AC 22786745-A-AC g1 +
10020148-A-G 10182539-A-G Y+
9918577-A-G 10080968-A-G Y+
13105884-A-G 10595370-A-G +
9917393-A-C 10079784-A-C Y+
9917396-A-T 10079787-A-T Y+
9917399-T-A 10079790-T-A Y+
9917404-C-G 10079795-C-G Y+
9917410-T-G 10079801-T-G Y+
9917417-C-G 10079808-C-G Y+
9918572-G-T 10080963-G-T Y+
9918784-A-C 10081175-A-C Y+
9913700-C-A 10076091-C-A Y+
10043987-C-CT 10206378-C-CT +
10032343-T-C 10194734-T-C Y+
9918789-TG-GA 10081180-TG-GA +
9918793-G-A 10081184-G-A Y+
9919802-G-C 10082193-G-C Y+
9919805-T-A 10082196-T-A Y+
10030031-G-A 10192422-G-A Y+
10029880-G-C 10192271-G-C Y+
9923935-GGT-TTC 10086326-GGT-TTC +
9914327-G-C 10076718-G-C Y+
13122821-G-T 10612307-G-T +
22293305-G-A 20131419-G-A DYZ19 +
9342985-A-AG 9505376-A-AG +
6130846-A-G 6262805-A-G FGC24471 +
6182846-G-GA 6314805-G-GA IR3_Dst 8×A+
6282827-A-AG 6414786-A-AG IR3_Dst +
15808526-C-A 13696646-C-A Y4 Y+
6402673-T-C 6534632-T-C +
8324144-A-C 8456103-A-C Y+
9225250-AT-A 9387641-AT-A +
9230418-G-A 9392809-G-A Y+
9303738-CG-GC 9466129-CG-GC +
9382786-A-G 9545177-A-G Y+
9909844-T-C 10072235-T-C Y+
9450406-A-ACTTAGTTATTATTTTCCTTTTTC 9612797-A-ACTTAGTTATTATTTTCCTTTTTC +
13276464-T-A 11120788-T-A +
9638442-G-C 9800833-G-C FGC61342 IR3_Prx +
13253111-G-A 11097435-G-A +
9644949-C-T 9807340-C-T BY80332 IR3_Prx +
9780663-AC-TT 9943054-AC-TT +
13131003-G-A 10620489-G-A A4934 +
9909834-T-C 10072225-T-C Y+
9909837-CAGA-AGGC 10072228-CAGA-AGGC +
13449891-T-GTA 11294215-T-GTA +
9986064-C-T 10148455-C-T Y+
13254790-CGA-GGC 11099114-CGA-GGC +
10020423-AAC-GAT 10182814-AAC-GAT +
10027405-AAA-CAC 10189796-AAA-CAC +
10019826-C-T 10182217-C-T Y+
10019924-A-G 10182315-A-G Y+
10020413-TT-CC 10182804-TT-CC +
10023720-CCT-TCC 10186111-CCT-TCC +
10027378-T-G 10189769-T-G Y+
10027375-A-G 10189766-A-G Y+
10027372-A-G 10189763-A-G Y+
10019816-GCA-ATG 10182207-GCA-ATG +
10023704-G-A 10186095-G-A Y+
27895460-A-AT 25749313-A-AT P1_Y2 +
18501975-T-TC 16390095-T-TC FGCLR203 P6_Dst +
10020431-AA-CG 10182822-AA-CG +
10020435-A-C 10182826-A-C Y+
10020551-GA-G 10182942-GA-G +
10020561-G-A 10182952-G-A Y+
10019823-A-G 10182214-A-G Y+
9985553-A-T 10147944-A-T Y+
13677226-C-A 11521550-C-A +
9962644-C-T 10125035-C-T Y+
10009959-G-A 10172350-G-A Y+
27897275-G-T 25751128-G-T FGCLR101 P1_Y2 +
20294373-T-TA 18132487-T-TA P5_Dst +
10016040-T-TTTTCCTTTTTCC 10178431-T-TTTTCCTTTTTCC +
10016159-A-T 10178550-A-T Y+
10028000-ATAT-GTGC 10190391-ATAT-GTGC +
10016168-G-C 10178559-G-C Y+
13142411-ACG-GTT 10631897-ACG-GTT +
13804321-C-G 11683615-C-G +
10027416-G-C 10189807-G-C Y+
9962120-AT-GG 10124511-AT-GG +
14258626-G-A 12137920-G-A Y+
9985446-T-G 10147837-T-G YSC0086 YSC0000086 Y+
10027413-C-CCT 10189804-C-CCT +
9986433-A-G 10148824-A-G Y+
10031414-T-C 10193805-T-C Y+
10016369-TGT-CGG 10178760-TGT-CGG +
10020564-AACC-GAAA 10182955-AACC-GAAA +
10020620-A-G 10183011-A-G Y+
10028008-T-C 10190399-T-C Y+
10021965-T-C 10184356-T-C Y+
10021922-TCA-CCG 10184313-TCA-CCG +
10021947-CA-AG 10184338-CA-AG +
24241727-A-AG 22095580-A-AG P3_b1 +
9983698-A-C 10146089-A-C Y+
10023572-A-G 10185963-A-G Y+
10027296-A-G 10189687-A-G Y+
10021960-T-G 10184351-T-G Y+
10027186-T-C 10189577-T-C Y+
10021893-CAT-TAC 10184284-CAT-TAC +
10024794-T-C 10187185-T-C Y+
13801470-A-C 11680764-A-C +
10021985-TG-CC 10184376-TG-CC +
10021995-T-C 10184386-T-C Y+
10022325-T-TACGG 10184716-T-TACGG +
10022330-A-T 10184721-A-T Y+
10022334-A-T 10184725-A-T Y+
9983676-G-A 10146067-G-A Y+
10021918-A-G 10184309-A-G Y+
10021882-G-C 10184273-G-C Y+
10024064-C-G 10186455-C-G Y+
10020743-G-T 10183134-G-T Y+
10020634-GTA-CTG 10183025-GTA-CTG +
10027356-TA-CG 10189747-TA-CG +
10020674-ATC-CTG 10183065-ATC-CTG +
10020728-C-G 10183119-C-G Y+
10027335-TTT-ATG 10189726-TTT-ATG +
10020732-GCC-TTG 10183123-GCC-TTG +
10027332-G-A 10189723-G-A Y+
10020757-A-T 10183148-A-T Y+
10021875-AGA-GGG 10184266-AGA-GGG +
10021098-C-G 10183489-C-G Y+
10021104-T-C 10183495-T-C Y+
10021111-T-C 10183502-T-C Y+
10027315-A-C 10189706-A-C Y+
10021181-T-G 10183572-T-G Y+
10027311-T-C 10189702-T-C Y+
10021863-A-G 10184254-A-G Y+
10027305-CGT-TGA 10189696-CGT-TGA +
10009951-T-G 10172342-T-G Y+
10028033-T-C 10190424-T-C Y+
10022704-AC-GG 10185095-AC-GG +
9990000-T-A 10152391-T-A Y+
13254709-A-T 11099033-A-T +
13247486-C-T 11091810-C-T +
10028845-TTAG-CGGC 10191236-TTAG-CGGC +
9989670-T-C 10152061-T-C PR1229 Y+
10028838-TA-CC 10191229-TA-CC +
9989678-T-C 10152069-T-C PR1230 Y+
9989700-T-G 10152091-T-G PR4952 Y+
9990026-C-T 10152417-C-T Y+
9989526-C-T 10151917-C-T PR4944 Y+
9950572-G-T 10112963-G-T Y+
9990247-A-G 10152638-A-G Y+
9990256-TC-CT 10152647-TC-CT +
9990286-T-C 10152677-T-C Y+
9990348-TG-CA 10152739-TG-CA +
9990357-A-T 10152748-A-T Y+
9990366-A-C 10152757-A-C Y+
9990478-TCT-CCC 10152869-TCT-CCC +
9989666-T-A 10152057-T-A Y+
9989523-T-C 10151914-T-C PR1224 Y+
9990547-C-T 10152938-C-T Y9×T+
59002734-A-C 56856587-A-C +
10023736-T-C 10186127-T-C Y+
10029269-T-C 10191660-T-C Y+
9987193-A-C 10149584-A-C Y+
9987810-AT-GC 10150201-AT-GC +
9988202-A-G 10150593-A-G FGC42175 SA21 Y+
9988271-A-G 10150662-A-G Y+
9988286-T-C 10150677-T-C Y+
9988305-G-A 10150696-G-A Y+
9988974-A-T 10151365-A-T Y+
10029265-A-C 10191656-A-C Y+
9988649-C-A 10151040-C-A Y+
9988652-T-G 10151043-T-G Y+
9988783-A-G 10151174-A-G Y+
22351262-G-A 20189376-G-A DYZ19 +
10023741-C-G 10186132-C-G Y+
10029191-TT-GG 10191582-TT-GG +
9988815-G-GAC 10151206-G-GAC +
9990541-T-C 10152932-T-C Y+
9990552-T-C 10152943-T-C Y+
10008983-A-G 10171374-A-G PR1253 Y+
10005008-T-C 10167399-T-C Y+
10004191-G-T 10166582-G-T Y+
10028169-T-C 10190560-T-C Y+
10004228-C-A 10166619-C-A Y+
10004319-A-AT 10166710-A-AT +
10004373-T-C 10166764-T-C Y+
10004604-T-C 10166995-T-C Y+
10004868-C-CGT 10167259-C-CGT 8×GT+
22263789-G-T 20101903-G-T DYZ19 +
10003506-T-TG 10165897-T-TG +
10028153-T-C 10190544-T-C Y+
10028149-T-G 10190540-T-G Y+
10005054-T-A 10167445-T-A Y+
10005500-C-T 10167891-C-T Y+
9950542-G-A 10112933-G-A ZS1361 Y+
10005672-C-T 10168063-C-T Y+
10008978-C-T 10171369-C-T Y+
10028061-C-CA 10190452-C-CA +
10004169-C-T 10166560-C-T Y+
10002756-T-C 10165147-T-C Y+
9990556-T-G 10152947-T-G Y+
9995408-C-T 10157799-C-T Y+
9985757-A-G 10148148-A-G Y+
9991313-C-CCTCTGATGGCCAGTGATGATATTGTGGTTTTGATTTGGATTT 10153704-C-CCTCTGATGGCCAGTGATGATATTGTGGTTTTGATTTGGATTT +
13469706-CG-AC 11314030-CG-AC +
59002815-ACG-GCT 56856668-ACG-GCT +
9993533-A-C 10155924-A-C Y+
9993959-T-A 10156350-T-A Y+
9994260-C-G 10156651-C-G Y+
10028635-G-A 10191026-G-A Y+
9997912-G-A 10160303-G-A Y+
10028623-AAT-CAC 10191014-AAT-CAC +
10028616-T-A 10191007-T-A Y+
9996153-C-G 10158544-C-G Y+
13855099-T-C 11734393-T-C +
9996218-GGA-AGG 10158609-GGA-AGG +
9996225-G-A 10158616-G-A Y+
9996234-A-G 10158625-A-G Y+
9997905-T-C 10160296-T-C Y+
10022701-A-G 10185092-A-G Y+
13867044-C-G 11746338-C-G **
58997620-TCTTG-ACA 56851473-TCTTG-ACA **
27760220-G-GT 25614073-G-GT P1_Y2 14×T**
22354575-AC-TA 20192689-AC-TA DYZ19 **
27546003-T-G 25399856-T-G P1_Y2 **
27540001-T-TC 25393854-T-TC FGCLR366 P1_Y2 **
27468020-T-C 25321873-T-C P1_Y2 **
26879518-T-C 24733371-T-C P1_r3 **
26466663-T-C 24320516-T-C P1_Y1 **
26446402-G-GC 24300255-G-GC P1_Y1 **
28357273-G-A 26211126-G-A P1_gr2 **
13659554-C-A 11503878-C-A **
28477777-G-A 26331630-G-A **
58997629-GGATTT-AGTTCG 56851482-GGATTT-AGTTCG **
17527342-A-T 15415462-A-T **
58986165-C-G 56840018-C-G **
58987204-T-G 56841057-T-G **
9957299-T-A 10119690-T-A **
58989266-G-A 56843119-G-A **
28253521-AAAC-A 26107374-AAAC-A P1_b4 **
9922823-CTC-TT 10085214-CTC-TT **
6177492-TGTGTGTG-AGCACTTTTTCTAAAACAGATTTTTTTTTATTCGTT 6309451-TGTGTGTG-AGCACTTTTTCTAAAACAGATTTTTTTTTATTCGTT IR3_Dst **
58997640-C-A 56851493-C-A **
58997408-G-A 56851261-G-A **
13677253-GG-TGAATTTAT 11521577-GG-TGAATTTAT **
58997404-C-T 56851257-C-T **
58997398-GG-TA 56851251-GG-TA **
13464130-G-C 11308454-G-C **
13436568-A-G 11280892-A-G **
58993741-AG-TC 56847594-AG-TC **
13464117-A-T 11308441-A-T **
58993838-G-C 56847691-G-C **
58993804-C-T 56847657-C-T **
58993816-GTT-CGG 56847669-GTT-CGG **
58985107-G-C 56838960-G-C **
26099850-TCTCTC-CCTTTG 23953703-TCTCTC-CCTTTG P1_Y1 **
28784657-G-A 26638510-G-A **
58973406-TTC-GTT 56827259-TTC-GTT **
28785082-T-A 26638935-T-A **
28785984-T-C 26639837-T-C **
28786691-A-C 26640544-A-C **
28786728-G-T 26640581-G-T **
28787508-G-T 26641361-G-T **
28798916-A-T 26652769-A-T **
28800778-A-T 26654631-A-T **
21575218-AC-A 19413332-AC-A **
58890675-C-G 56700196-G-C **
58973412-TG-AT 56827265-TG-AT **
10015035-T-C 10177426-T-C **
13651002-A-C 11495326-A-C **
13677244-G-AAAAGC 11521568-G-AAAAGC **
13801883-TC-ACGAATG 11681177-TC-ACGAATG **
58975904-A-T 56829757-A-T **
58978030-C-A 56831883-C-A **
58978507-C-A 56832360-C-A **
58978521-C-A 56832374-C-A **
58979744-CCA-GCT 56833597-CCA-GCT **
58984519-TGC-AGG 56838372-TGC-AGG **
27862554-GAGAGA-CAAAGG 25716407-GAGAGA-CAAAGG P1_Y2 **
26375820-T-TTATTTC 24229673-T-TTATTTC P1_Y1 **
13865794-G-T 11745088-G-T **
26148892-A-ACACTCATAATACCATTATAC 24002745-A-ACACTCATAATACCATTATAC P1_Y1 **
13677256-G-GATATAGCA 11521580-G-GATATAGCA **
13476340-ATAAA-CAAGT 11320664-ATAAA-CAAGT **
9996148-A-G 10158539-A-G **
13477500-G-C 11321824-G-C **
13643083-A-T 11487407-A-T **
13645130-T-G 11489454-T-G **
9990660-C-T 10153051-C-T **
9990200-G-C 10152591-G-C **
13660082-G-A 11504406-G-A BY87392 **
13660092-C-T 11504416-C-T **
13665424-GAT-CAA 11509748-GAT-CAA **
13670016-G-C 11514340-G-C **
13672736-G-A 11517060-G-A **
9988292-A-G 10150683-A-G **
13677248-G-GGTCTC 11521572-G-GGTCTC **
13678079-G-C 11522403-G-C **
13466184-CT-AC 11310508-CT-AC **
13825561-TT-CA 11704855-TT-CA **
13850156-C-CA 11729450-C-CA **
9962821-G-T 10125212-G-T FGC24472 **
9978914-A-C 10141305-A-C F18064 **
13842378-G-A 11721672-G-A **
13839172-A-C 11718466-A-C **
13826576-A-T 11705870-A-T **
13816699-G-T 11695993-G-T **
13679130-A-C 11523454-A-C **
9985302-T-TGTGGTAAA 10147693-T-TGTGGTAAA **
13804632-GATTCT-G 11683926-GATTCT-G **
13801678-G-A 11680972-G-A **
13693000-G-A 11537324-G-A **
13686902-GT-CG 11531226-GT-CG **
13686895-CTC-TTA 11531219-CTC-TTA **
13476112-T-A 11320436-T-A **
13464230-G-A 11308554-G-A S13951 **
13860153-T-G 11739447-T-G **
13125487-C-G 10614973-C-G **
10032846-C-CCTTCCCCCGCTTG 10195237-C-CCTTCCCCCGCTTG **
10024656-G-C 10187047-G-C **
10024517-T-C 10186908-T-C **
10024107-T-C 10186498-T-C **
10023745-C-G 10186136-C-G **
10044836-G-A 10207227-G-A **
10068402-G-A 10230793-G-A FGC24469 **
10069247-T-C 10231638-T-C **
10021808-T-C 10184199-T-C **
10082619-A-G 10245010-A-G **
10090777-T-A 10253168-T-A **
10101629-GC-G 10264020-GC-G **
13108683-A-AG 10598169-A-AG **
13125481-GCT-CTC 10614967-GCT-CTC **
13125492-G-A 10614978-G-A **
13464091-G-T 11308415-G-T **
13143815-C-A 10633301-C-A **
13463551-AT-GG 11307875-AT-GG **
13452604-T-A 11296928-T-A **
13448654-C-G 11292978-C-G **
10014334-A-G 10176725-A-G **
13337694-C-T 11182018-C-T **
13194434-C-T 11038758-C-T **
13143689-T-G 10633175-T-G **
10017103-GG-CA 10179494-GG-CA **
13143685-G-A 10633171-G-A **
13143107-T-C 10632593-T-C **
13142013-C-G 10631499-C-G **
13141593-C-G 10631079-C-G **
13141383-CCC-TCT 10630869-CCC-TCT **
13133105-G-C 10622591-G-C **
13858415-G-A 11737709-G-A **
13860745-G-A 11740039-G-A **
25637684-CT-GA 23491537-CT-GA P1_b3 **
22352445-C-A 20190559-C-A DYZ19 **
21613933-C-CTTGTTCTTTGTTTTCTATTTTT 19452047-C-CTTGTTCTTTGTTTTCTATTTTT **
22015506-T-C 19853620-T-C **
22255113-A-T 20093227-A-T DYZ19 **
6117352-T-A 6249311-T-A **
5447975-T-TATATATAG 5579934-T-TATATATAG **
4821085-A-G 4953044-A-G **
3901393-A-T 4033352-A-T **
22281950-AGCTC-TGTTG 20120064-AGCTC-TGTTG DYZ19 **
3496119-T-TCTGTATAATATGTTAAGTGTGA 3628078-T-TCTGTATAATATGTTAAGTGTGA **
3173838-A-AATTTCTTCATGTACAAAAATTAACTC 3305797-A-AATTTCTTCATGTACAAAAATTAACTC **
58968245-T-G 56822098-T-G **
22297120-CCA-ACT 20135234-CCA-ACT DYZ19 **
22322663-G-A 20160777-G-A DYZ19 **
22352436-CGCG-AGAT 20190550-CGCG-AGAT DYZ19 **
22422201-TTAT-GCAC 20260315-TTAT-GCAC DYZ19 **
6346117-T-C 6478076-T-C **
13108778-G-T 10598264-G-T **
9216148-A-AG 9378539-A-AG **
24634080-C-CA 22487933-C-CA P3_t2 18×A**
24566692-G-C 22420545-G-C P3_t2 **
24562239-T-C 22416092-T-C P3_t2 **
24388530-T-A 22242383-T-A **
23380162-T-TTATTTATTTATG 21218276-T-TTATTTATTTATG **
23100397-A-G 20938511-A-G **
22424240-CAGAG-TAATA 20262354-CAGAG-TAATA DYZ19 **
22972701-C-T 20810815-C-T **
22507115-T-G 20345229-T-G DYZ19 **
22507111-GC-TT 20345225-GC-TT DYZ19 **
22474957-T-G 20313071-T-G DYZ19 **
24566705-G-T 22420558-G-T P3_t2 **
9342865-T-TG 9505256-T-TG **
21061660-T-G 18899774-T-G F23845 **
6347721-A-G 6479680-A-G **
13860748-T-C 11740042-T-C **
15296250-A-G 13184349-A-G **
13860757-AT-TA 11740051-AT-TA **
13861954-TC-AT 11741248-TC-AT **
13865483-T-G 11744777-T-G **
13865791-A-C 11745085-A-C **
13865970-G-A 11745264-G-A **
13867706-C-A 11747000-C-A **
13868716-G-A 11748010-G-A **
13869478-T-C 11748772-T-C **
9925377-GT-TG 10087768-GT-TG **
13870176-GA-AC 11749470-GA-AC **
13872863-T-C 11752157-T-C **
9922829-GA-CT 10085220-GA-CT **
14242647-G-GGATAGATACATAGATATGATAGAT 12121941-G-GGATAGATACATAGATATGATAGAT **
9920377-A-G 10082768-A-G **
15675468-G-A 13563588-G-A **
6347725-A-G 6479684-A-G BY53558 **
18113589-G-GAAAAGAGAAAGAGAAAGGGA 16001709-G-GAAAAGAGAAAGAGAAAGGGA **
6347793-A-G 6479752-A-G **
7464037-C-CA 7595996-C-CA IR1_L 19×A**
8006729-T-C 8138688-T-C **
8007620-A-C 8139579-A-C **
18331141-CA-TG 16219261-CA-TG P6_Prx **
18246337-A-G 16134457-A-G **
9783418-G-A 9945809-G-A **
15675550-AG-TA 13563670-AG-TA **
9910863-C-A 10073254-C-A **
9910866-T-C 10073257-T-C **
9910872-T-G 10073263-T-G **
9915354-A-T 10077745-A-T **
16051025-TCTT-CTTA 13939145-TCTT-CTTA **
9915373-A-G 10077764-A-G **
13808130-A-G 11687424-A-G **

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: GS0040392*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs2588
Variant counts last updated 2019-02-26 23:24:37.
SNP counts for this person are currently not being used in the age analysis.

* BED data not available. Using default values.

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