Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Names	Region	McDonald BED	combBED	STR	Other GS0040392
59002944-G-TA	56856797-G-TA						+
13671058-ATT-CTG	11515382-ATT-CTG						+
13651102-A-T	11495426-A-T						+
13651106-AC-GT	11495430-AC-GT						+
13658806-CGG-GGA	11503130-CGG-GGA						+
13658826-G-T	11503150-G-T						+
13658835-TCG-ACT	11503159-TCG-ACT						+
13666282-C-G	11510606-C-G						+
13666501-TAA-GAT	11510825-TAA-GAT						+
13666509-TGG-CGA	11510833-TGG-CGA						+
13666514-GGC-TCG	11510838-GGC-TCG						+
13666524-T-C	11510848-T-C						+
13671073-A-T	11515397-A-T						+
13651087-TG-AC	11495411-TG-AC						+
13671085-T-G	11515409-T-G						+
13675998-GAGTGC-G	11520322-GAGTGC-G						+
13676006-TAGTGTGGAAA-T	11520330-TAGTGTGGAAA-T						+
13676023-GAA-AGT	11520347-GAA-AGT						+
13676030-ATG-GTA	11520354-ATG-GTA						+
13676037-C-G	11520361-C-G						+
13676051-C-A	11520375-C-A						+
13677221-A-C	11521545-A-C						+
13680752-A-C	11525076-A-C						+
13687665-AGA-TGG	11531989-AGA-TGG						+
13651091-A-G	11495415-A-G						+
13651071-ATGT-CTCG	11495395-ATGT-CTCG						+
13800859-G-T	11680153-G-T						+
13642275-T-C	11486599-T-C						+
13466234-A-G	11310558-A-G						+
13467653-AG-GC	11311977-AG-GC						+
13469726-G-T	11314050-G-T						+
13469733-CA-C	11314057-CA-C						+
13469751-G-A	11314075-G-A						+
13469759-A-G	11314083-A-G						+
13476124-G-C	11320448-G-C						+
13477494-A-G	11321818-A-G						+
13478387-AG-CA	11322711-AG-CA						+
13487462-TTC-GTG	11331786-TTC-GTG						+
13642473-A-T	11486797-A-T						+
13651061-ATGCAGTA-GAGGAATG	11495385-ATGCAGTA-GAGGAATG						+
13645214-A-G	11489538-A-G						+
13645226-G-C	11489550-G-C						+
13645402-A-T	11489726-A-T						+
13650354-A-G	11494678-A-G						+
13650358-G-T	11494682-G-T						+
13650367-TCGAAC-AGATAT	11494691-TCGAAC-AGATAT						+
13650375-A-C	11494699-A-C						+
13650384-A-C	11494708-A-C						+
13650398-A-T	11494722-A-T						+
13651056-A-C	11495380-A-C						+
13800852-TC-AT	11680146-TC-AT						+
13800863-T-A	11680157-T-A						+
13466219-GCT-ATG	11310543-GCT-ATG						+
13848932-G-A	11728226-G-A						+
13843443-T-A	11722737-T-A						+
13843570-G-C	11722864-G-C						+
13843574-G-A	11722868-G-A	ZS6780					+
13846090-G-T	11725384-G-T						+
13848877-A-G	11728171-A-G						+
13848882-T-G	11728176-T-G						+
13848891-TG-GC	11728185-TG-GC						+
13848910-A-AC	11728204-A-AC						+
13848919-ATT-CTG	11728213-ATT-CTG						+
13848925-TGGAT-CAAAA	11728219-TGGAT-CAAAA						+
13848936-A-C	11728230-A-C						+
13842416-AA-CG	11721710-AA-CG						+
13848951-GGAATG-CGTACA	11728245-GGAATG-CGTACA						+
13848960-T-C	11728254-T-C						+
13848965-TGG-AGA	11728259-TGG-AGA						+
13848975-T-C	11728269-T-C						+
13848987-G-C	11728281-G-C						+
13849820-T-A	11729114-T-A						+
13849826-T-A	11729120-T-A						+
13850243-AC-CA	11729537-AC-CA						+
13851006-T-C	11730300-T-C						+
13851695-ACA-TCG	11730989-ACA-TCG						+
13843438-T-G	11722732-T-G						+
13842413-G-A	11721707-G-A						+
13800873-AC-GG	11680167-AC-GG						+
13813679-GT-TC	11692973-GT-TC						+
13801443-TTG-GTA	11680737-TTG-GTA						+
13801539-G-A	11680833-G-A						+
13801547-TGG-CGA	11680841-TGG-CGA						+
13811500-T-G	11690794-T-G						+
13813270-A-T	11692564-A-T						+
13813277-T-G	11692571-T-G						+
13813282-T-G	11692576-T-G						+
13813287-GAA-CAG	11692581-GAA-CAG						+
13813302-G-A	11692596-G-A						+
13813660-G-A	11692954-G-A						+
13815573-G-A	11694867-G-A						+
13842398-GAA-CAG	11721692-GAA-CAG						+
13815583-G-A	11694877-G-A						+
13822033-G-C	11701327-G-C						+
13822977-G-C	11702271-G-C						+
13835943-A-G	11715237-A-G						+
13835954-G-A	11715248-G-A						+
13839181-A-C	11718475-A-C						+
13839597-A-T	11718891-A-T						+
13839669-T-A	11718963-T-A						+
13840112-C-CATGGAGATTAATGGAATTGAATGGAGACTA	11719406-C-CATGGAGATTAATGGAATTGAATGGAGACTA						+
13841246-GA-TG	11720540-GA-TG						+
13842386-A-T	11721680-A-T						+
13466229-CCA-ACC	11310553-CCA-ACC						+
13466216-C-T	11310540-C-T						+
13854317-CC-TG	11733611-CC-TG						+
10037556-A-C	10199947-A-C						+
10031752-T-C	10194143-T-C			Y			+
10031888-C-T	10194279-C-T			Y			+
10031907-ATG-GTT	10194298-ATG-GTT						+
10031919-CA-TG	10194310-CA-TG						+
10031944-G-A	10194335-G-A			Y			+
10032317-A-C	10194708-A-C			Y			+
10032322-ACA-GCC	10194713-ACA-GCC						+
10032327-TGCGCCCGC-CGTGACTGG	10194718-TGCGCCCGC-CGTGACTGG						+
10033106-C-T	10195497-C-T			Y			+
10035104-A-G	10197495-A-G						+
10037560-A-C	10199951-A-C						+
10031717-ACA-GCC	10194108-ACA-GCC						+
10037564-C-T	10199955-C-T						+
10044000-T-G	10206391-T-G						+
10044406-C-G	10206797-C-G						+
10061804-C-G	10224195-C-G						+
10061813-A-G	10224204-A-G						+
10061816-A-C	10224207-A-C						+
10061824-C-G	10224215-C-G						+
10062983-G-C	10225374-G-C						+
10062987-T-A	10225378-T-A						+
10062990-AT-GG	10225381-AT-GG						+
10031745-A-G	10194136-A-G			Y			+
10031693-AGA-GGG	10194084-AGA-GGG						+
10063006-G-C	10225397-G-C						+
10031451-T-C	10193842-T-C			Y			+
10029820-A-G	10192211-A-G			Y			+
10029831-A-G	10192222-A-G			Y			+
10029837-C-G	10192228-C-G			Y			+
10029843-A-C	10192234-A-C			Y			+
10029848-A-G	10192239-A-G			Y			+
10029868-C-G	10192259-C-G			Y			+
10029921-A-G	10192312-A-G			Y			+
10029926-A-C	10192317-A-C			Y			+
10029985-T-G	10192376-T-G			Y			+
10030003-TG-CC	10192394-TG-CC						+
10031486-ATT-CTC	10193877-ATT-CTC						+
10031672-GCCATCCACCTCAC-G	10194063-GCCATCCACCTCAC-G						+
10031502-G-A	10193893-G-A			Y			+
10031565-TG-CA	10193956-TG-CA						+
10031580-C-CG	10193971-C-CG						+
10031596-TG-CA	10193987-TG-CA						+
10031604-T-C	10193995-T-C			Y			+
10031633-AT-GC	10194024-AT-GC						+
10031637-T-C	10194028-T-C			Y			+
10031643-A-G	10194034-A-G			Y			+
10031649-C-A	10194040-C-A			Y			+
10031666-AGGGC-A	10194057-AGGGC-A						+
10063001-TCG-ACA	10225392-TCG-ACA						+
10065295-C-G	10227686-C-G						+
13466181-T-G	11310505-T-G						+
13379063-A-G	11223387-A-G						+
13133069-CCTT-GATC	10622555-CCTT-GATC						+
13133075-A-C	10622561-A-C						+
13133082-G-T	10622568-G-T						+
13133085-A-C	10622571-A-C						+
13133089-ATG-GTT	10622575-ATG-GTT						+
13134305-C-T	10623791-C-T						+
13276763-G-T	11121087-G-T						+
13300850-T-G	11145174-T-G						+
13337675-A-T	11181999-A-T						+
13361028-G-A	11205352-G-A						+
13396342-T-C	11240666-T-C						+
13112763-A-G	10602249-A-G						+
13448649-C-G	11292973-C-G						+
13448675-A-C	11292999-A-C						+
13448688-C-A	11293012-C-A						+
13463011-C-T	11307335-C-T						+
13463046-TAT-CAG	11307370-TAT-CAG						+
13465956-C-A	11310280-C-A						+
13465961-G-A	11310285-G-A						+
13465969-A-T	11310293-A-T						+
13465977-CA-GC	11310301-CA-GC						+
13466177-G-C	11310501-G-C						+
13131015-G-A	10620501-G-A						+
10082872-A-T	10245263-A-T						+
10065301-AG-GC	10227692-AG-GC						+
10071589-TTAA-CTCT	10233980-TTAA-CTCT						+
10065305-CA-TC	10227696-CA-TC						+
10068427-G-T	10230818-G-T						+
10068440-C-T	10230831-C-T						+
10068448-T-C	10230839-T-C						+
10068729-C-A	10231120-C-A						+
10068742-C-G	10231133-C-G						+
10069243-C-A	10231634-C-A						+
10071566-T-A	10233957-T-A						+
10071573-GCA-AGT	10233964-GCA-AGT						+
10071578-G-T	10233969-G-T						+
10072042-A-T	10234433-A-T						+
10082867-AAG-CTA	10245258-AAG-CTA						+
10072062-T-C	10234453-T-C						+
10072220-AAC-TCT	10234611-AAC-TCT						+
10072259-G-T	10234650-G-T						+
10072262-AGAG-GAAA	10234653-AGAG-GAAA						+
10072269-GAA-AAG	10234660-GAA-AAG						+
10072487-C-G	10234878-C-G						+
13801867-A-C	11681161-A-C	S14510					+
10072501-G-C	10234892-G-C						+
10082622-A-T	10245013-A-T						+
10082628-GG-TT	10245019-GG-TT						+
10082856-GATTCT-CACTGC	10245247-GATTCT-CACTGC						+
13852370-T-C	11731664-T-C						+
13855102-G-A	11734396-G-A						+
10029265-A-C	10191656-A-C			Y			+
58978034-C-G	56831887-C-G						+
28710359-C-CA	26564212-C-CA					12×A	+
28798910-G-A	26652763-G-A						+
28799108-T-C	26652961-T-C						+
28799113-G-C	26652966-G-C						+
58819824-A-T	56771047-T-A						+
58913583-G-C	56677288-C-G						+
58973416-T-A	56827269-T-A						+
58973424-AAGTT-GATTC	56827277-AAGTT-GATTC						+
58973433-TCA-CCT	56827286-TCA-CCT						+
58976184-C-A	56830037-C-A						+
58978612-A-T	56832465-A-T						+
28293233-G-GC	26147086-G-GC		P1_b4				+
58985079-G-A	56838932-G-A						+
58985086-T-G	56838939-T-G						+
58985090-C-A	56838943-C-A						+
58985100-A-C	56838953-A-C						+
58985888-C-G	56839741-C-G						+
58985893-T-C	56839746-T-C						+
58985900-AC-GG	56839753-AC-GG						+
58985906-T-A	56839759-T-A						+
58986097-C-T	56839950-C-T						+
58987208-TG-CA	56841061-TG-CA						+
28358343-CA-C	26212196-CA-C		P1_gr2			8×A	+
28281362-T-G	26135215-T-G		P1_b4				+
58987217-T-G	56841070-T-G						+
26269231-A-G	24123084-A-G		P1_Y1				+
24303293-A-G	22157146-A-G	ZS1896	P3_t1				+
24549679-C-CG	22403532-C-CG		P3_t2				+
24766139-T-C	22619992-T-C	FGC61341	P3_b2				+
25142869-G-GC	22996722-G-GC		g1				+
25202407-T-A	23056260-T-A		g1				+
25328923-C-T	23182776-C-T		P2_r1				+
25350135-G-C	23203988-G-C		P2_r1				+
25359692-A-G	23213545-A-G		P2_r2				+
25388901-T-C	23242754-T-C		P2_r2				+
25617956-A-G	23471809-A-G		P1_gr1				+
26846893-C-CA	24700746-C-CA		P1_r3				+
27870269-A-G	25724122-A-G	FGC61346	P1_Y2				+
26951070-A-G	24804923-A-G		P1_r3				+
27206218-C-CTGTGCATGTGTGAGAATGACAAT	25060071-C-CTGTGCATGTGTGAGAATGACAAT		P1_g3				+
27290634-GT-G	25144487-GT-G		P1_g3				+
27392284-A-G	25246137-A-G	FGC61343	P1_g3				+
27443549-G-GC	25297402-G-GC		P1_Y2				+
27565890-T-TG	25419743-T-TG		P1_Y2				+
27616494-C-CT	25470347-C-CT		P1_Y2			9×T	+
27670052-A-C	25523905-A-C		P1_Y2				+
27777270-TCTTTCTGGATA-T	25631123-TCTTTCTGGATA-T		P1_Y2				+
27859008-A-T	25712861-A-T		P1_Y2				+
58987214-A-T	56841067-A-T						+
58987222-G-A	56841075-G-A						+
24101909-C-T	21955762-C-T	FGCLR2	P3_b1				+
10027351-AA-G	10189742-AA-G						+
9989126-C-TTCT	10151517-C-TTCT						+
10032842-C-ACCCCCCCTT	10195233-C-ACCCCCCCTT						+
10022338-GC-TCATTA	10184729-GC-TCATTA						+
10019850-GATGG-AAACGA	10182241-GATGG-AAACGA						+
10071583-C-AG	10233974-C-AG						+
13677231-TTT-ATGGAATCATATA	11521555-TTT-ATGGAATCATATA						+
14491300-CCCTTGGT-TCGAGAGAA							+
10033113-AGGC-CGGTGT	10195504-AGGC-CGGTGT						+
59002947-G-AAAATTTCA	56856800-G-AAAATTTCA						+
10031505-AT-GCC	10193896-AT-GCC						+
10005431-AGT-GC	10167822-AGT-GC						+
58997392-TTA-CTG	56851245-TTA-CTG						+
13671076-GATTC-AACG	11515400-GATTC-AACG						+
14491311-G-ACT							+
13801456-ATG-TTTC	11680750-ATG-TTTC						+
10015657-CTGCTGC-G	10178048-CTGCTGC-G						+
13848943-AAC-TA	11728237-AAC-TA						+
58985082-CG-TTA	56838935-CG-TTA						+
13650840-ATT-TA	11495164-ATT-TA						+
14491321-T-CACCA							+
58997643-TGGGTA-GAGCT	56851496-TGGGTA-GAGCT						+
58993774-CT-ACC	56847627-CT-ACC						+
59001381-ATAA-TTTT	56855234-ATAA-TTTT						+
58997382-TGACA-CAATG	56851235-TGACA-CAATG						+
58987227-C-T	56841080-C-T						+
58993721-CCT-TCC	56847574-CCT-TCC						+
58987231-G-A	56841084-G-A						+
58989274-T-A	56843127-T-A						+
58989279-A-C	56843132-A-C						+
58989286-A-T	56843139-A-T						+
58989289-T-A	56843142-T-A						+
58989294-G-A	56843147-G-A						+
58993686-A-C	56847539-A-C						+
58993692-GG-CA	56847545-GG-CA						+
58993698-T-G	56847551-T-G						+
58993716-G-A	56847569-G-A						+
58993747-CTC-ATG	56847600-CTC-ATG						+
58997378-T-A	56851231-T-A						+
58993756-CACTGGCA-AATTAACT	56847609-CACTGGCA-AATTAACT						+
58993779-CC-TA	56847632-CC-TA						+
58993786-AAGCA-CATCC	56847639-AAGCA-CATCC						+
58993821-C-T	56847674-C-T						+
58993829-G-A	56847682-G-A						+
58993832-TGA-CTT	56847685-TGA-CTT						+
58997339-AC-GG	56851192-AC-GG						+
58997348-ACTA-CCAC	56851201-ACTA-CCAC						+
58997355-TCT-CCA	56851208-TCT-CCA						+
58997363-T-C	56851216-T-C						+
58997372-GT-G	56851225-GT-G						+
24299427-T-TG	22153280-T-TG		P3_t1				+
23694875-TC-T	21532989-TC-T						+
13855107-GA-TT	11734401-GA-TT						+
16105607-G-C	13993727-G-C		P8_Prx				+
15779595-C-T	13667715-C-T			Y	Y		+
15807798-T-G	13695918-T-G			Y			+
15807806-G-T	13695926-G-T			Y			+
15808676-T-C	13696796-T-C			Y			+
15808804-G-A	13696924-G-A			Y	Y		+
15808812-G-C	13696932-G-C			Y	Y		+
15888161-G-C	13776281-G-C			Y			+
15938252-G-A	13826372-G-A			Y	Y		+
15942113-T-TAAAGCAAAAGCTAAGGTAAAGTG	13830233-T-TAAAGCAAAAGCTAAGGTAAAGTG						+
16081175-C-T	13969295-C-T			Y			+
16207613-C-T	14095733-C-T	FGC45767		Y			+
14719578-T-TA	12607646-T-TA					19×A	+
16661913-G-GTCCTGGCGTGTGCGTGCT	14550033-G-GTCCTGGCGTGTGCGTGCT						+
16785455-C-T	14673575-C-T	M6969		Y			+
17068652-A-C	14956772-A-C			Y			+
17182941-G-T	15071061-G-T			Y			+
17268186-A-G	15156306-A-G			Y			+
17619294-C-T	15507414-C-T			Y			+
17697595-T-G	15585715-T-G			Y			+
17819785-C-T	15707905-C-T			Y	Y		+
18230919-T-C	16119039-T-C						+
18304214-A-AG	16192334-A-AG		P6_Prx				+
15676834-C-T	13564954-C-T	F20018		Y			+
14680794-G-GA	12568860-G-GA					15×A	+
18525345-G-GC	16413465-G-GC		P6_Dst				+
13866988-T-A	11746282-T-A						+
13855120-A-G	11734414-A-G						+
13855129-A-C	11734423-A-C						+
13856537-G-T	11735831-G-T						+
13857000-C-T	11736294-C-T						+
13857008-A-T	11736302-A-T						+
13857017-G-A	11736311-G-A						+
13857020-T-G	11736314-T-G						+
13859600-GAAT-AATA	11738894-GAAT-AATA						+
13866566-A-T	11745860-A-T						+
13866576-T-C	11745870-T-C						+
13868530-G-T	11747824-G-T						+
14491318-G-GC							+
13869337-ATG-GTA	11748631-ATG-GTA						+
13869343-T-C	11748637-T-C						+
13869349-A-T	11748643-A-T						+
13870087-TA-GT	11749381-TA-GT						+
13870104-CA-TG	11749398-CA-TG						+
14073429-G-C	11952723-G-C			Y	Y		+
14156755-G-T	12036049-G-T			Y			+
14399061-AAA-GAG	12278357-AAA-GAG						+
14491296-TC-GA							+
14491314-GAG-CTC							+
18374449-T-TC	16262569-T-TC		P6_Prx				+
18964849-T-G	16852969-T-G			Y	Y		+
23100409-A-G	20938523-A-G			Y			+
22354628-AAT-GAG	20192742-AAT-GAG		DYZ19				+
22263798-CT-TA	20101912-CT-TA		DYZ19				+
22278780-G-T	20116894-G-T		DYZ19				+
22281837-AG-TA	20119951-AG-TA		DYZ19				+
22290273-C-T	20128387-C-T		DYZ19				+
22293309-CAG-TAC	20131423-CAG-TAC		DYZ19				+
22293320-G-A	20131434-G-A		DYZ19				+
22297134-CA-AG	20135248-CA-AG		DYZ19				+
22322668-C-A	20160782-C-A		DYZ19				+
22349275-GG-CT	20187389-GG-CT		DYZ19				+
22349297-C-A	20187411-C-A		DYZ19				+
22354638-GG-AT	20192752-GG-AT		DYZ19				+
22263779-GGTGTTG-TACGGTT	20101893-GGTGTTG-TACGGTT		DYZ19				+
22354646-GTCT-TCAA	20192760-GTCT-TCAA		DYZ19				+
22356775-CC-AT	20194889-CC-AT		DYZ19				+
22424247-T-C	20262361-T-C		DYZ19				+
22427287-C-G	20265401-C-G		DYZ19				+
22440186-T-C	20278300-T-C		DYZ19				+
22441303-C-G	20279417-C-G		DYZ19				+
22445825-G-T	20283939-G-T		DYZ19				+
22510104-GTG-ATT	20348218-GTG-ATT		DYZ19				+
22511140-C-G	20349254-C-G		DYZ19				+
22629508-G-A	20467622-G-A			Y			+
22263793-CAA-AAG	20101907-CAA-AAG		DYZ19				+
22263654-TACT-GGTG	20101768-TACT-GGTG		DYZ19				+
19678517-G-GC	17566637-G-GC		P5_Prx				+
20365237-TTTTCTT-CTCTTTC	18203351-TTTTCTT-CTCTTTC		P5_Dst				+
19725205-A-AC	17613325-A-AC		P5_Prx				+
19773774-GC-CT	17661894-GC-CT		P5_Prx				+
19773784-C-A	17661904-C-A		P5_Prx				+
19773796-C-A	17661916-C-A		P5_Prx				+
19774599-AGA-TCT	17662719-AGA-TCT		P5_Prx				+
19774604-C-G	17662724-C-G		P5_Prx				+
19774608-AGATAG-GCCAAT	17662728-AGATAG-GCCAAT		P5_Prx				+
19774617-T-C	17662737-T-C		P5_Prx				+
19774623-T-C	17662743-T-C		P5_Prx				+
19774628-G-C	17662748-G-C		P5_Prx				+
20365246-TAGAAT-CATTCC	18203360-TAGAAT-CATTCC		P5_Dst				+
22263646-CAC-TAA	20101760-CAC-TAA		DYZ19				+
20365255-C-G	18203369-C-G		P5_Dst				+
20365258-AG-GT	18203372-AG-GT		P5_Dst				+
20385533-A-G	18223647-A-G	FGC61340	P5_Dst				+
20388305-T-A	18226419-T-A		P5_Dst				+
20416397-A-AT	18254511-A-AT		P5_Dst			15×T	+
20488263-G-GC	18326377-G-GC		P5_Dst				+
20508319-A-AG	18346433-A-AG		P5_Dst				+
20707643-T-TA	18545757-T-TA		P4_Prx			9×A	+
20995344-T-TG	18833458-T-TG		P4_Dst				+
21078408-C-CA	18916522-C-CA					12×A	+
22229905-AT-GG	20068019-AT-GG		DYZ19				+
10029269-T-C	10191660-T-C			Y			+
10072492-C-T	10234883-C-T						+
10029191-TT-GG	10191582-TT-GG						+
9957358-C-T	10119749-C-T			Y			+
9946347-A-G	10108738-A-G			Y			+
9950396-A-C	10112787-A-C			Y			+
9950409-T-C	10112800-T-C			Y			+
9950419-A-G	10112810-A-G			Y			+
9950425-A-G	10112816-A-G			Y			+
9950457-A-C	10112848-A-C			Y			+
9950470-GGGAAAA-AGCAGAG	10112861-GGGAAAA-AGCAGAG						+
9956269-C-A	10118660-C-A			Y			+
9956272-C-T	10118663-C-T			Y			+
9957449-T-G	10119840-T-G	S3040		Y			+
9946318-G-T	10108709-G-T			Y			+
22354237-C-CA	20192351-C-CA		DYZ19				+
9960720-G-A	10123111-G-A			Y			+
9962569-CA-TG	10124960-CA-TG						+
9962578-AGT-GTG	10124969-AGT-GTG						+
9962697-T-G	10125088-T-G			Y			+
9962714-G-A	10125105-G-A			Y			+
9962780-G-T	10125171-G-T			Y			+
9962806-A-G	10125197-A-G			Y			+
9962810-T-C	10125201-T-C	Z4564		Y			+
9946336-C-T	10108727-C-T			Y			+
9946313-C-T	10108704-C-T			Y			+
9962854-AGCT-GTCG	10125245-AGCT-GTCG						+
9980602-C-T	10142993-C-T			Y			+
9918577-A-G	10080968-A-G			Y			+
9984401-A-G	10146792-A-G			Y			+
9918784-A-C	10081175-A-C			Y			+
9918789-TG-GA	10081180-TG-GA						+
9983269-T-A	10145660-T-A			Y			+
9918793-G-A	10081184-G-A			Y			+
9919802-G-C	10082193-G-C			Y			+
9919805-T-A	10082196-T-A			Y			+
9980608-A-T	10142999-A-T			Y			+
10028845-TTAG-CGGC	10191236-TTAG-CGGC						+
9205154-G-A	9367545-G-A	Z31228		Y			+
9923935-GGT-TTC	10086326-GGT-TTC						+
9923945-CA-GG	10086336-CA-GG						+
9957278-G-A	10119669-G-A			Y			+
9946264-A-G	10108655-A-G			Y			+
9938944-C-G	10101335-C-G			Y			+
9343987-G-GC	9506378-G-GC						+
13277830-A-G	11122154-A-G						+
9996124-G-GA	10158515-G-GA						+
9984959-AGG-GGA	10147350-AGG-GGA						+
22356817-T-A	20194931-T-A		DYZ19				+
9963477-A-C	10125868-A-C			Y			+
9986031-A-C	10148422-A-C			Y			+
9985469-T-C	10147860-T-C			Y			+
9984828-G-T	10147219-G-T			Y			+
9985208-T-C	10147599-T-C			Y			+
9985211-C-A	10147602-C-A			Y			+
9985225-G-C	10147616-G-C			Y			+
9985241-C-A	10147632-C-A	PR1221		Y			+
6233064-G-GC	6365023-G-GC		IR3_Dst				+
9985286-C-T	10147677-C-T	F3910		Y			+
9985300-A-G	10147691-A-G			Y			+
9985336-G-A	10147727-G-A			Y			+
9985475-T-G	10147866-T-G			Y			+
9984818-G-T	10147209-G-T			Y			+
9985526-A-C	10147917-A-C			Y			+
9985747-A-ACTGATAAATTCAATTGTATTAAATGTAGAAGCTTTGAT	10148138-A-ACTGATAAATTCAATTGTATTAAATGTAGAAGCTTTGAT						+
9986023-AT-GC	10148414-AT-GC						+
9986064-C-T	10148455-C-T			Y			+
9986273-A-C	10148664-A-C			Y			+
59002734-A-C	56856587-A-C						+
9986278-A-G	10148669-A-G			Y			+
22351262-G-A	20189376-G-A		DYZ19				+
58998597-A-G	56852450-A-G						+
4134484-C-CA	4266443-C-CA					18×A	+
9984438-TG-CC	10146829-TG-CC						+
9968136-AC-GT	10130527-AC-GT						+
9981287-A-C	10143678-A-C			Y			+
9968209-G-GAT	10130600-G-GAT						+
9975597-T-C	10137988-T-C			Y			+
9979687-T-A	10142078-T-A			Y			+
9979690-A-T	10142081-A-T			Y			+
9979697-A-T	10142088-A-T			Y			+
9979700-G-A	10142091-G-A			Y			+
9980771-A-AGAAG	10143162-A-AGAAG						+
9980797-G-A	10143188-G-A			Y			+
9980800-T-G	10143191-T-G			Y			+
9982348-G-A	10144739-G-A			Y			+
13449891-T-GTA	11294215-T-GTA						+
9982393-A-G	10144784-A-G			Y			+
9983204-A-C	10145595-A-C			Y			+
9983306-G-A	10145697-G-A			Y			+
9983764-G-T	10146155-G-T	Z2923		Y			+
9983783-A-C	10146174-A-C			Y			+
59002930-C-T	56856783-C-T						+
9983815-A-C	10146206-A-C			Y			+
9984433-T-C	10146824-T-C			Y			+
59002952-T-C	56856805-T-C						+
9918572-G-T	10080963-G-T			Y			+
9917417-C-G	10079808-C-G			Y			+
13254709-A-T	11099033-A-T						+
13324015-G-A	11168339-G-A						+
9990124-GA-G	10152515-GA-G						+
10027402-T-C	10189793-T-C			Y			+
10031955-T-C	10194346-T-C			Y			+
10044173-C-A	10206564-C-A						+
19803096-T-C	17691216-T-C		P5_Prx				+
10061547-C-A	10223938-C-A						+
10063533-G-T	10225924-G-T						+
15808526-C-A	13696646-C-A	Y4		Y			+
13375994-A-G	11220318-A-G						+
13411532-C-G	11255856-C-G						+
9988565-C-T	10150956-C-T	SA19		Y			+
20331710-G-GGA	18169824-G-GGA		P5_Dst				+
13302919-C-G	11147243-C-G						+
13290759-G-C	11135083-G-C						+
59002362-C-T	56856215-C-T						+
59028736-G-A	56882589-G-A						+
59031595-C-T	56885448-C-T						+
9956790-TG-CA	10119181-TG-CA						+
14709276-AC-TG							+
28119963-T-G	25973816-T-G		P1_b4				+
22293305-G-A	20131419-G-A		DYZ19				+
9985634-G-A	10148025-G-A			Y			+
18231243-G-T	16119363-G-T						+
25890672-G-GC	23744525-G-GC		P1_Y1				+
7026571-A-G	7158530-A-G			Y			+
22351198-AC-TA	20189312-AC-TA		DYZ19				+
22351269-GT-TC	20189383-GT-TC		DYZ19				+
22356835-A-AC	20194949-A-AC		DYZ19				+
59017813-G-A	56871666-G-A						+
9992845-A-T	10155236-A-T			Y			+
22446667-TGA-ATT	20284781-TGA-ATT		DYZ19				+
9302430-A-AC	9464821-A-AC						+
13859575-AAA-CAG	11738869-AAA-CAG						+
59003293-G-A	56857146-G-A						+
9962028-T-C	10124419-T-C			Y			+
28050211-T-TTTC	25904064-T-TTTC		P1_Y2				+
59003075-A-C	56856928-A-C						+
59002632-G-A	56856485-G-A						+
3592291-C-T	3724250-C-T	Y49					+
59002627-G-T	56856480-G-T						+
9171857-T-G	9334248-T-G	FGC4723 Z8215		Y			+
27254673-A-C	25108526-A-C		P1_g3				+
24932892-A-AC	22786745-A-AC		g1				+
9946246-A-C	10108637-A-C			Y			+
13276464-T-A	11120788-T-A						+
13276382-G-T	11120706-G-T						+
9917410-T-G	10079801-T-G			Y			+
9909844-T-C	10072235-T-C			Y			+
9342985-A-AG	9505376-A-AG						+
9382786-A-G	9545177-A-G			Y			+
9450406-A-ACTTAGTTATTATTTTCCTTTTTC	9612797-A-ACTTAGTTATTATTTTCCTTTTTC						+
9638442-G-C	9800833-G-C	FGC61342	IR3_Prx				+
9644949-C-T	9807340-C-T		IR3_Prx				+
9780663-AC-TT	9943054-AC-TT						+
10020148-A-G	10182539-A-G			Y			+
9909834-T-C	10072225-T-C			Y			+
9909837-CAGA-AGGC	10072228-CAGA-AGGC						+
10019975-T-G	10182366-T-G			Y			+
9230418-G-A	9392809-G-A			Y			+
9913700-C-A	10076091-C-A			Y			+
9914327-G-C	10076718-G-C			Y			+
10005468-A-G	10167859-A-G			Y			+
9990337-T-C	10152728-T-C	Z11983		Y			+
9987152-C-T	10149543-C-T			Y			+
9917393-A-C	10079784-A-C			Y			+
9917396-A-T	10079787-A-T			Y			+
9917399-T-A	10079790-T-A			Y			+
9917404-C-G	10079795-C-G			Y			+
9303738-CG-GC	9466129-CG-GC						+
9225250-AT-A	9387641-AT-A						+
24567078-G-A	22420931-G-A	FGC61344	P3_t2				+
6130846-A-G	6262805-A-G	FGC24471					+
28753337-A-C	26607190-A-C						+
24435424-C-G	22289277-C-G				Y		+
13837420-TC-CT	11716714-TC-CT						+
9985498-C-T	10147889-C-T			Y			+
4148899-G-T	4280858-G-T						+
4227092-TTC-ATT	4359051-TTC-ATT						+
13253111-G-A	11097435-G-A						+
6099384-C-CA	6231343-C-CA					17×A	+
6117905-G-A	6249864-G-A	FGC59429					+
6182846-G-GA	6314805-G-GA		IR3_Dst			8×A	+
8324144-A-C	8456103-A-C			Y			+
6282827-A-AG	6414786-A-AG		IR3_Dst				+
13131003-G-A	10620489-G-A	A4934					+
13122821-G-T	10612307-G-T						+
13105884-A-G	10595370-A-G						+
10043987-C-CT	10206378-C-CT						+
6402673-T-C	6534632-T-C						+
10032343-T-C	10194734-T-C			Y			+
10030031-G-A	10192422-G-A			Y			+
10029880-G-C	10192271-G-C			Y			+
9986338-G-A	10148729-G-A			Y			+
9985283-T-A	10147674-T-A			Y			+
13247486-C-T	11091810-C-T						+
10020743-G-T	10183134-G-T			Y			+
10020435-A-C	10182826-A-C			Y			+
10020551-GA-G	10182942-GA-G						+
10020561-G-A	10182952-G-A			Y			+
10020564-AACC-GAAA	10182955-AACC-GAAA						+
10020620-A-G	10183011-A-G			Y			+
10020634-GTA-CTG	10183025-GTA-CTG						+
10020674-ATC-CTG	10183065-ATC-CTG						+
10020728-C-G	10183119-C-G			Y			+
10020732-GCC-TTG	10183123-GCC-TTG						+
10020757-A-T	10183148-A-T			Y			+
10020423-AAC-GAT	10182814-AAC-GAT						+
10021098-C-G	10183489-C-G			Y			+
10021104-T-C	10183495-T-C			Y			+
10021111-T-C	10183502-T-C			Y			+
10021181-T-G	10183572-T-G			Y			+
24241727-A-AG	22095580-A-AG		P3_b1				+
20294373-T-TA	18132487-T-TA		P5_Dst				+
10021863-A-G	10184254-A-G			Y			+
10021875-AGA-GGG	10184266-AGA-GGG						+
10021882-G-C	10184273-G-C			Y			+
10020431-AA-CG	10182822-AA-CG						+
10020413-TT-CC	10182804-TT-CC						+
10021918-A-G	10184309-A-G			Y			+
10016040-T-TTTTCCTTTTTCC	10178431-T-TTTTCCTTTTTCC						+
9985446-T-G	10147837-T-G	YSC0086 YSC0000086		Y			+
9986433-A-G	10148824-A-G			Y			+
10031414-T-C	10193805-T-C			Y			+
13804321-C-G	11683615-C-G						+
10008978-C-T	10171369-C-T			Y			+
9985553-A-T	10147944-A-T			Y			+
10008983-A-G	10171374-A-G	PR1253		Y			+
10009951-T-G	10172342-T-G			Y			+
10009959-G-A	10172350-G-A			Y			+
10016159-A-T	10178550-A-T			Y			+
10019924-A-G	10182315-A-G			Y			+
27895460-A-AT	25749313-A-AT		P1_Y2				+
10016168-G-C	10178559-G-C			Y			+
24625376-A-G	22479229-A-G	FGCLR100	P3_t2				+
18501975-T-TC	16390095-T-TC		P6_Dst				+
10016369-TGT-CGG	10178760-TGT-CGG						+
13677226-C-A	11521550-C-A						+
10019816-GCA-ATG	10182207-GCA-ATG						+
10019823-A-G	10182214-A-G			Y			+
10019826-C-T	10182217-C-T			Y			+
10021893-CAT-TAC	10184284-CAT-TAC						+
10021922-TCA-CCG	10184313-TCA-CCG						+
9962120-AT-GG	10124511-AT-GG						+
10028000-ATAT-GTGC	10190391-ATAT-GTGC						+
10027332-G-A	10189723-G-A			Y			+
10027335-TTT-ATG	10189726-TTT-ATG						+
10027356-TA-CG	10189747-TA-CG						+
10027372-A-G	10189763-A-G			Y			+
10027375-A-G	10189766-A-G			Y			+
10027378-T-G	10189769-T-G			Y			+
10027405-AAA-CAC	10189796-AAA-CAC						+
10027413-C-CCT	10189804-C-CCT						+
10027416-G-C	10189807-G-C			Y			+
10028008-T-C	10190399-T-C			Y			+
10027311-T-C	10189702-T-C			Y			+
10028033-T-C	10190424-T-C			Y			+
10028061-C-CA	10190452-C-CA						+
10028149-T-G	10190540-T-G			Y			+
10028153-T-C	10190544-T-C			Y			+
10028169-T-C	10190560-T-C			Y			+
10028616-T-A	10191007-T-A			Y			+
10028623-AAT-CAC	10191014-AAT-CAC						+
10028635-G-A	10191026-G-A			Y			+
10028838-TA-CC	10191229-TA-CC						+
10027315-A-C	10189706-A-C			Y			+
10027305-CGT-TGA	10189696-CGT-TGA						+
10021947-CA-AG	10184338-CA-AG						+
10022704-AC-GG	10185095-AC-GG						+
10021960-T-G	10184351-T-G			Y			+
10021965-T-C	10184356-T-C			Y			+
10021985-TG-CC	10184376-TG-CC						+
10021995-T-C	10184386-T-C			Y			+
13855099-T-C	11734393-T-C						+
10022325-T-TACGG	10184716-T-TACGG						+
10022330-A-T	10184721-A-T			Y			+
10022334-A-T	10184725-A-T			Y			+
10022701-A-G	10185092-A-G			Y			+
10023572-A-G	10185963-A-G			Y			+
10027296-A-G	10189687-A-G			Y			+
10023704-G-A	10186095-G-A			Y			+
9983698-A-C	10146089-A-C			Y			+
10023720-CCT-TCC	10186111-CCT-TCC						+
10023736-T-C	10186127-T-C			Y			+
10023741-C-G	10186132-C-G			Y			+
10024064-C-G	10186455-C-G			Y			+
9983676-G-A	10146067-G-A			Y			+
13801470-A-C	11680764-A-C						+
10024794-T-C	10187185-T-C			Y			+
10027186-T-C	10189577-T-C			Y			+
14258626-G-A	12137920-G-A			Y			+
6255417-T-TG	6387376-T-TG		IR3_Dst				+
13142411-ACG-GTT	10631897-ACG-GTT						+
9988305-G-A	10150696-G-A			Y			+
9990547-C-T	10152938-C-T			Y		9×T	+
13254790-CGA-GGC	11099114-CGA-GGC						+
59002815-ACG-GCT	56856668-ACG-GCT						+
9990552-T-C	10152943-T-C			Y			+
13469706-CG-AC	11314030-CG-AC						+
9985757-A-G	10148148-A-G			Y			+
9990556-T-G	10152947-T-G			Y			+
9950572-G-T	10112963-G-T			Y			+
9988652-T-G	10151043-T-G			Y			+
9991313-C-CCTCTGATGGCCAGTGATGATATTGTGGTTTTGATTTGGATTT	10153704-C-CCTCTGATGGCCAGTGATGATATTGTGGTTTTGATTTGGATTT						+
9993533-A-C	10155924-A-C			Y			+
9993959-T-A	10156350-T-A			Y			+
9988286-T-C	10150677-T-C			Y			+
9994260-C-G	10156651-C-G			Y			+
9995408-C-T	10157799-C-T			Y			+
9988271-A-G	10150662-A-G			Y			+
9989526-C-T	10151917-C-T	PR4944		Y			+
9988649-C-A	10151040-C-A			Y			+
9988783-A-G	10151174-A-G			Y			+
9996153-C-G	10158544-C-G			Y			+
9990256-TC-CT	10152647-TC-CT						+
9989670-T-C	10152061-T-C	PR1229		Y			+
9989678-T-C	10152069-T-C	PR1230		Y			+
9989700-T-G	10152091-T-G	PR4952		Y			+
9990000-T-A	10152391-T-A			Y			+
9990026-C-T	10152417-C-T			Y			+
22263789-G-T	20101903-G-T		DYZ19				+
9989523-T-C	10151914-T-C	PR1224		Y			+
9990247-A-G	10152638-A-G			Y			+
9990286-T-C	10152677-T-C			Y			+
9988815-G-GAC	10151206-G-GAC						+
9990348-TG-CA	10152739-TG-CA						+
9990357-A-T	10152748-A-T			Y			+
9988974-A-T	10151365-A-T			Y			+
9950542-G-A	10112933-G-A	ZS1361		Y			+
27897275-G-T	25751128-G-T	FGCLR101	P1_Y2				+
9990366-A-C	10152757-A-C			Y			+
9990478-TCT-CCC	10152869-TCT-CCC						+
9990541-T-C	10152932-T-C			Y			+
9988202-A-G	10150593-A-G	FGC42175 SA21		Y			+
9989666-T-A	10152057-T-A			Y			+
9996218-GGA-AGG	10158609-GGA-AGG						+
9986673-A-C	10149064-A-C			Y			+
9987084-C-G	10149475-C-G			Y			+
10004319-A-AT	10166710-A-AT						+
9986705-A-T	10149096-A-T			Y			+
9986700-A-G	10149091-A-G			Y			+
10004373-T-C	10166764-T-C			Y			+
10004604-T-C	10166995-T-C			Y			+
10004868-C-CGT	10167259-C-CGT					8×GT	+
10004228-C-A	10166619-C-A			Y			+
10005008-T-C	10167399-T-C			Y			+
9986641-G-A	10149032-G-A			Y			+
9986635-C-A	10149026-C-A			Y			+
9962644-C-T	10125035-C-T			Y			+
10005054-T-A	10167445-T-A			Y			+
10005500-C-T	10167891-C-T			Y			+
10005672-C-T	10168063-C-T			Y			+
9987166-A-G	10149557-A-G			Y			+
9986728-A-T	10149119-A-T			Y			+
13292569-A-G	11136893-A-G						+
10002756-T-C	10165147-T-C			Y			+
22356859-A-T	20194973-A-T		DYZ19				+
9997912-G-A	10160303-G-A			Y			+
9997905-T-C	10160296-T-C			Y			+
9996234-A-G	10158625-A-G			Y			+
9996225-G-A	10158616-G-A			Y			+
9987810-AT-GC	10150201-AT-GC						+
9987193-A-C	10149584-A-C			Y			+
10004169-C-T	10166560-C-T			Y			+
10004191-G-T	10166582-G-T			Y			+
10003506-T-TG	10165897-T-TG						+
26148892-A-ACACTCATAATACCATTATAC	24002745-A-ACACTCATAATACCATTATAC		P1_Y1				**
58993804-C-T	56847657-C-T						**
25637684-CT-GA	23491537-CT-GA		P1_b3				**
58997620-TCTTG-ACA	56851473-TCTTG-ACA						**
13867044-C-G	11746338-C-G						**
27546003-T-G	25399856-T-G		P1_Y2				**
27468020-T-C	25321873-T-C		P1_Y2				**
27540001-T-TC	25393854-T-TC		P1_Y2				**
58993838-G-C	56847691-G-C						**
26879518-T-C	24733371-T-C		P1_r3				**
58986086-G-C	56839939-G-C						**
26375820-T-TTATTTC	24229673-T-TTATTTC		P1_Y1				**
26446402-G-GC	24300255-G-GC		P1_Y1				**
21575218-AC-A	19413332-AC-A						**
26466663-T-C	24320516-T-C		P1_Y1				**
58993741-AG-TC	56847594-AG-TC						**
13436568-A-G	11280892-A-G						**
10015035-T-C	10177426-T-C						**
28785082-T-A	26638935-T-A						**
13651002-A-C	11495326-A-C						**
58984519-TGC-AGG	56838372-TGC-AGG						**
6177492-TGTGTGTG-AGCACTTTTTCTAAAACAGATTTTTTTTTATTCGTT	6309451-TGTGTGTG-AGCACTTTTTCTAAAACAGATTTTTTTTTATTCGTT		IR3_Dst				**
9922823-CTC-TT	10085214-CTC-TT						**
58978030-C-A	56831883-C-A						**
58978507-C-A	56832360-C-A						**
58978521-C-A	56832374-C-A						**
58989266-G-A	56843119-G-A						**
27862554-GAGAGA-CAAAGG	25716407-GAGAGA-CAAAGG		P1_Y2				**
58993816-GTT-CGG	56847669-GTT-CGG						**
28253521-AAAC-A	26107374-AAAC-A		P1_b4				**
58997640-C-A	56851493-C-A						**
26099850-TCTCTC-CCTTTG	23953703-TCTCTC-CCTTTG		P1_Y1				**
13677253-GG-TGAATTTAT	11521577-GG-TGAATTTAT						**
13659554-C-A	11503878-C-A						**
58987204-T-G	56841057-T-G						**
58986165-C-G	56840018-C-G						**
58985107-G-C	56838960-G-C						**
17527342-A-T	15415462-A-T						**
9957299-T-A	10119690-T-A						**
13801883-TC-ACGAATG	11681177-TC-ACGAATG						**
58975904-A-T	56829757-A-T						**
13464117-A-T	11308441-A-T						**
28786728-G-T	26640581-G-T						**
28357273-G-A	26211126-G-A		P1_gr2				**
28477777-G-A	26331630-G-A						**
28724174-A-AT	26578027-A-AT					20×T	**
13464130-G-C	11308454-G-C						**
28784657-G-A	26638510-G-A						**
20386768-G-GA	18224882-G-GA		P5_Dst			15×A	**
28785984-T-C	26639837-T-C						**
28786691-A-C	26640544-A-C						**
28787508-G-T	26641361-G-T						**
58997629-GGATTT-AGTTCG	56851482-GGATTT-AGTTCG						**
58997398-GG-TA	56851251-GG-TA						**
28798916-A-T	26652769-A-T						**
58997404-C-T	56851257-C-T						**
58997408-G-A	56851261-G-A						**
28800778-A-T	26654631-A-T						**
13677244-G-AAAAGC	11521568-G-AAAAGC						**
58890675-C-G	56700196-G-C						**
58973406-TTC-GTT	56827259-TTC-GTT						**
58973412-TG-AT	56827265-TG-AT						**
58979744-CCA-GCT	56833597-CCA-GCT						**
13867706-C-A	11747000-C-A						**
27760220-G-GT	25614073-G-GT		P1_Y2			14×T	**
13660092-C-T	11504416-C-T						**
13677256-G-GATATAGCA	11521580-G-GATATAGCA						**
13677248-G-GGTCTC	11521572-G-GGTCTC						**
13672736-G-A	11517060-G-A						**
13670016-G-C	11514340-G-C						**
9988292-A-G	10150683-A-G						**
13665424-GAT-CAA	11509748-GAT-CAA						**
13660082-G-A	11504406-G-A						**
13679130-A-C	11523454-A-C						**
9990200-G-C	10152591-G-C						**
13645130-T-G	11489454-T-G						**
13643083-A-T	11487407-A-T						**
13477500-G-C	11321824-G-C						**
13476340-ATAAA-CAAGT	11320664-ATAAA-CAAGT						**
13476112-T-A	11320436-T-A						**
13678079-G-C	11522403-G-C						**
13686895-CTC-TTA	11531219-CTC-TTA						**
9996148-A-G	10158539-A-G						**
13839172-A-C	11718466-A-C						**
9925377-GT-TG	10087768-GT-TG						**
13858415-G-A	11737709-G-A						**
13850156-C-CA	11729450-C-CA						**
9962821-G-T	10125212-G-T	FGC24472					**
9978914-A-C	10141305-A-C	F18064					**
13842378-G-A	11721672-G-A						**
13826576-A-T	11705870-A-T						**
13686902-GT-CG	11531226-GT-CG						**
13825561-TT-CA	11704855-TT-CA						**
13816699-G-T	11695993-G-T						**
9985302-T-TGTGGTAAA	10147693-T-TGTGGTAAA						**
13804632-GATTCT-G	11683926-GATTCT-G						**
13801678-G-A	11680972-G-A						**
13693000-G-A	11537324-G-A						**
9990660-C-T	10153051-C-T						**
13466184-CT-AC	11310508-CT-AC						**
13860745-G-A	11740039-G-A						**
10068402-G-A	10230793-G-A	FGC24469					**
13108683-A-AG	10598169-A-AG						**
10101629-GC-G	10264020-GC-G						**
10090777-T-A	10253168-T-A						**
10017103-GG-CA	10179494-GG-CA						**
10082619-A-G	10245010-A-G						**
10069247-T-C	10231638-T-C						**
10021808-T-C	10184199-T-C						**
13125487-C-G	10614973-C-G						**
10044836-G-A	10207227-G-A						**
10032846-C-CCTTCCCCCGCTTG	10195237-C-CCTTCCCCCGCTTG						**
10023745-C-G	10186136-C-G						**
10024107-T-C	10186498-T-C						**
10024517-T-C	10186908-T-C						**
10024656-G-C	10187047-G-C						**
13125481-GCT-CTC	10614967-GCT-CTC						**
13125492-G-A	10614978-G-A						**
13464230-G-A	11308554-G-A	S13951					**
13143815-C-A	10633301-C-A						**
13464091-G-T	11308415-G-T						**
13463551-AT-GG	11307875-AT-GG						**
13452604-T-A	11296928-T-A						**
13448654-C-G	11292978-C-G						**
13337694-C-T	11182018-C-T						**
13194434-C-T	11038758-C-T						**
13143689-T-G	10633175-T-G						**
10014334-A-G	10176725-A-G						**
13143685-G-A	10633171-G-A						**
13143107-T-C	10632593-T-C						**
13142013-C-G	10631499-C-G						**
13141593-C-G	10631079-C-G						**
13141383-CCC-TCT	10630869-CCC-TCT						**
13135194-C-T	10624680-C-T						**
13133105-G-C	10622591-G-C						**
13860153-T-G	11739447-T-G						**
13860748-T-C	11740042-T-C						**
22354575-AC-TA	20192689-AC-TA		DYZ19				**
22015506-T-C	19853620-T-C						**
22322663-G-A	20160777-G-A		DYZ19				**
22297120-CCA-ACT	20135234-CCA-ACT		DYZ19				**
24566705-G-T	22420558-G-T		P3_t2				**
22281950-AGCTC-TGTTG	20120064-AGCTC-TGTTG		DYZ19				**
9342865-T-TG	9505256-T-TG						**
22255113-A-T	20093227-A-T		DYZ19				**
21613933-C-CTTGTTCTTTGTTTTCTATTTTT	19452047-C-CTTGTTCTTTGTTTTCTATTTTT						**
22352436-CGCG-AGAT	20190550-CGCG-AGAT		DYZ19				**
21061660-T-G	18899774-T-G	F23845					**
58968245-T-G	56822098-T-G						**
3173838-A-AATTTCTTCATGTACAAAAATTAACTC	3305797-A-AATTTCTTCATGTACAAAAATTAACTC						**
3496119-T-TCTGTATAATATGTTAAGTGTGA	3628078-T-TCTGTATAATATGTTAAGTGTGA						**
3901393-A-T	4033352-A-T						**
4821085-A-G	4953044-A-G						**
13108778-G-T	10598264-G-T						**
22352445-C-A	20190559-C-A		DYZ19				**
5447975-T-TATATATAG	5579934-T-TATATATAG						**
22981819-T-TA	20819933-T-TA					15×A	**
24634080-C-CA	22487933-C-CA		P3_t2			18×A	**
24566692-G-C	22420545-G-C		P3_t2				**
24562239-T-C	22416092-T-C		P3_t2				**
24388530-T-A	22242383-T-A						**
23380162-T-TTATTTATTTATG	21218276-T-TTATTTATTTATG						**
23100397-A-G	20938511-A-G						**
22972701-C-T	20810815-C-T						**
22422201-TTAT-GCAC	20260315-TTAT-GCAC		DYZ19				**
6347729-A-G	6479688-A-G	A19522 BY31693					**
22507115-T-G	20345229-T-G		DYZ19				**
22507111-GC-TT	20345225-GC-TT		DYZ19				**
22474957-T-G	20313071-T-G		DYZ19				**
9216148-A-AG	9378539-A-AG						**
22424240-CAGAG-TAATA	20262354-CAGAG-TAATA		DYZ19				**
4976099-C-CA	5108058-C-CA					16×A	**
6117352-T-A	6249311-T-A						**
13860757-AT-TA	11740051-AT-TA						**
13868716-G-A	11748010-G-A						**
15675468-G-A	13563588-G-A						**
15296250-A-G	13184349-A-G						**
14242647-G-GGATAGATACATAGATATGATAGAT	12121941-G-GGATAGATACATAGATATGATAGAT						**
13872863-T-C	11752157-T-C						**
13870176-GA-AC	11749470-GA-AC						**
13869478-T-C	11748772-T-C						**
9920377-A-G	10082768-A-G						**
9915373-A-G	10077764-A-G						**
9922829-GA-CT	10085220-GA-CT						**
13865970-G-A	11745264-G-A						**
13865794-G-T	11745088-G-T						**
13865791-A-C	11745085-A-C						**
13865483-T-G	11744777-T-G						**
13861954-TC-AT	11741248-TC-AT						**
15675550-AG-TA	13563670-AG-TA						**
9915354-A-T	10077745-A-T						**
6346117-T-C	6478076-T-C						**
18331141-CA-TG	16219261-CA-TG		P6_Prx				**
6347721-A-G	6479680-A-G						**
6347725-A-G	6479684-A-G						**
19604809-C-CA	17492929-C-CA		P5_Prx			19×A	**
19597973-C-CA	17486093-C-CA		P5_Prx			17×A	**
6347793-A-G	6479752-A-G						**
7464037-C-CA	7595996-C-CA		IR1_L			19×A	**
8006729-T-C	8138688-T-C						**
9910872-T-G	10073263-T-G						**
18246337-A-G	16134457-A-G						**
8007620-A-C	8139579-A-C						**
18113589-G-GAAAAGAGAAAGAGAAAGGGA	16001709-G-GAAAAGAGAAAGAGAAAGGGA						**
9783418-G-A	9945809-G-A						**
16051025-TCTT-CTTA	13939145-TCTT-CTTA						**
9910863-C-A	10073254-C-A						**
9910866-T-C	10073257-T-C						**
13808130-A-G	11687424-A-G						**

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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Big Tree Main Page

Daly

Tree Position

Unique Mutations