Rathlin1

aDNA: RM127
For this man's 'unique' mutations, please look at the short list of mutations which I checked in his BAM file, rather than the long list of variants.

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > Z30233

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRaDNA
RM127		Manual
Edits
13419968-T-A 11264292-T-A +
10018170-A-G 10180561-A-G Y+
10018171-C-T 10180562-C-T Y+
10018173-T-C 10180564-T-C Y+
13310913-G-T 11155237-G-T +
9945066-G-T 10107457-G-T Y+
13444243-T-C 11288567-T-C +
6660370-G-A 6792329-G-A YY++
3490704-G-A 3622663-G-A +
6781023-GT-G 6912982-GT-G ++
8773533-A-G 8905492-A-G YY++
13430680-G-A 11275004-G-A +
14774289-G-A 12662358-G-A YY++
16643054-C-T 14531174-C-T FT175951 YY++
17486452-G-A 15374572-G-A YY+
22058362-C-T 19896476-C-T Y+
9945199-G-A 10107590-G-A Y*
10018052-C-T 10180443-C-T Y*
9940489-C-A 10102880-C-A PF3678 Y*
22811820-G-T 20649934-G-T CTS10868 YY*
9962930-A-C 10125321-A-C Y*
9983676-G-A 10146067-G-A Y*
9983698-A-C 10146089-A-C Y*
10012349-G-C 10174740-G-C Y*
10012353-T-TC 10174744-T-TC *
13489300-A-T 11333624-A-T BY177505 *
13469182-G-A 11313506-G-A *
28760827-C-T 26614680-C-T CTS12957 Y*
9961264-A-C 10123655-A-C Y*
10042975-A-G 10205366-A-G *
23900993-T-C 21739107-T-C *
23901041-T-C 21739155-T-C *
23901044-T-C 21739158-T-C *
9934926-A-T 10097317-A-T Y*
13430952-T-C 11275276-T-C *
23900998-C-CTAA 21739112-C-CTAA *
10029655-G-A 10192046-G-A Y*
21154904-C-T 18993018-C-T Y*
10029322-T-C 10191713-T-C Y*
9938851-A-T 10101242-A-T Y*
13481308-G-T 11325632-G-T *
9954146-TA-T 10116537-TA-T *
13677797-T-G 11522121-T-G DYZ17 *
10064091-A-G 10226482-A-G *
9954500-G-C 10116891-G-C Y*
13475663-G-A 11319987-G-A *
13475674-C-T 11319998-C-T *
13475686-G-T 11320010-G-T *
13436785-TTA-T 11281109-TTA-T *
10022014-G-A 10184405-G-A Y*
9986015-A-T 10148406-A-T Y*
9962207-A-T 10124598-A-T Y*
9950584-T-C 10112975-T-C ZS1362 Y*
13423160-A-T 11267484-A-T *
13423188-T-A 11267512-T-A *
10042463-A-C 10204854-A-C *
13438854-A-T 11283178-A-T *
9940543-T-G 10102934-T-G Y*
13438821-T-G 11283145-T-G *
10060700-G-C 10223091-G-C *
13435721-C-A 11280045-C-A *
9933192-G-T 10095583-G-T Y*
13435719-G-A 11280043-G-A *
10060658-A-T 10223049-A-T *
10060686-A-G 10223077-A-G *
13435750-C-T 11280074-C-T *
28585959-T-C 26439812-T-C *
13436080-A-AT 11280404-A-AT 8×T*
10064142-C-G 10226533-C-G *
28693850-A-G 26547703-A-G *
10052443-C-T 10214834-C-T *
10064281-C-A 10226672-C-A *
9934877-C-T 10097268-C-T Y*
10043772-T-C 10206163-T-C *
10064259-T-C 10226650-T-C *
13436829-C-T 11281153-C-T *
10049560-A-G 10211951-A-G *
10049572-T-C 10211963-T-C *
10049370-G-A 10211761-G-A *
10064129-T-G 10226520-T-G *
10065527-TA-T 10227918-TA-T 9×A*
10052412-T-G 10214803-T-G *
10065597-T-G 10227988-T-G *
10065607-G-A 10227998-G-A *
9930843-C-G 10093234-C-G Y*
13470585-G-A 11314909-G-A *
5934869-G-A 6066828-G-A Z704Z235 *
9930095-C-T 10092486-C-T Y*
9930899-T-C 10093290-T-C Y*
9933183-GT-G 10095574-GT-G *
9933606-G-T 10095997-G-T FTA49221 Y*
9933624-G-C 10096015-G-C Y*
9939506-G-A 10101897-G-A Y*
9942850-T-C 10105241-T-C Y*
9942851-G-A 10105242-G-A Y*
9942899-A-C 10105290-A-C Y*
9942922-C-A 10105313-C-A Y*
9943359-G-A 10105750-G-A Y*
9943530-T-C 10105921-T-C Y*
9950734-A-G 10113125-A-G Z21544 Y*
9956790-T-C 10119181-T-C Y*
9956791-G-A 10119182-G-A Y*
9956934-A-C 10119325-A-C Y*
9957011-TA-T 10119402-TA-T *
9960353-T-A 10122744-T-A Y*
9986031-A-C 10148422-A-C Y*
9986032-C-A 10148423-C-A Y*
9996093-A-G 10158484-A-G Y*
10003228-T-A 10165619-T-A Y*
10006207-G-A 10168598-G-A Y*
10014714-A-G 10177105-A-G Y*
10014734-A-T 10177125-A-T Y*
10038366-T-A 10200757-T-A *
10041079-A-T 10203470-A-T *
10041089-A-T 10203480-A-T *
10042527-C-G 10204918-C-G *
10042540-T-C 10204931-T-C *
10043987-C-CT 10206378-C-CT *
10045116-C-T 10207507-C-T *
10045142-A-C 10207533-A-C *
10048192-G-A 10210583-G-A *
10048682-A-C 10211073-A-C *
10048933-A-T 10211324-A-T *
10048936-A-G 10211327-A-G *
10048945-T-C 10211336-T-C *
10049384-C-T 10211775-C-T *
10049469-C-T 10211860-C-T *
10050076-C-T 10212467-C-T *
10050273-A-G 10212664-A-G *
10050966-A-G 10213357-A-G *
10051017-A-G 10213408-A-G *
10051018-T-A 10213409-T-A *
10051441-T-G 10213832-T-G *
10051453-C-A 10213844-C-A *
10051459-G-T 10213850-G-T *
10052103-A-T 10214494-A-T *
10052414-T-A 10214805-T-A *
10054249-AG-A 10216640-AG-A *
10055207-C-T 10217598-C-T *
10055236-T-G 10217627-T-G *
10055473-T-A 10217864-T-A *
10056818-G-C 10219209-G-C *
10057344-G-C 10219735-G-C *
10057434-A-G 10219825-A-G *
10060708-A-C 10223099-A-C *
10061058-T-C 10223449-T-C *
10061174-A-T 10223565-A-T *
10061197-G-A 10223588-G-A FT91444 *
10061202-A-G 10223593-A-G *
10065544-G-C 10227935-G-C *
10065831-C-G 10228222-C-G *
10068156-G-C 10230547-G-C *
10068187-T-C 10230578-T-C *
10071114-G-A 10233505-G-A *
10071145-T-A 10233536-T-A *
10072047-C-T 10234438-C-T *
13266437-G-A 11110761-G-A *
13407994-C-T 11252318-C-T *
13428497-A-C 11272821-A-C *
13428501-C-G 11272825-C-G *
13428544-C-T 11272868-C-T *
13432571-G-T 11276895-G-T *
13437248-G-A 11281572-G-A *
13440850-C-T 11285174-C-T *
13444235-C-T 11288559-C-T FT127737 *
13466941-T-C 11311265-T-C *
13600537-T-C 11444861-T-C *
21154966-C-G 18993080-C-G Y*
21155023-A-G 18993137-A-G Y*
13400928-G-A 11245252-G-A *
13423011-T-A 11267335-T-A *
9942949-T-A 10105340-T-A Y*
10044527-G-A 10206918-G-A FGC43351 *
10059472-T-C 10221863-T-C *
10044555-G-A 10206946-G-A *
10018135-T-G 10180526-T-G FGC46296 Y*
10042994-G-T 10205385-G-T *
7210600-C-T 7342559-C-T FT83384 Y*
9930128-GC-G 10092519-GC-G *
9931494-C-G 10093885-C-G Y*
9931513-C-T 10093904-C-T Y*
9932008-T-C 10094399-T-C Y*
9932936-T-C 10095327-T-C Y*
9932971-G-T 10095362-G-T Y*
9932988-A-C 10095379-A-C Y*
9933122-G-T 10095513-G-T Y133717 Y*
9934934-A-C 10097325-A-C Y*
9939206-T-C 10101597-T-C Y*
9939789-C-A 10102180-C-A FT361927 Y*
9939798-T-A 10102189-T-A Y*
9939859-T-A 10102250-T-A Y*
9940483-A-G 10102874-A-G Y*
9940580-TA-T 10102971-TA-T *
9940647-A-G 10103038-A-G Y*
9940790-T-C 10103181-T-C Y*
9943367-C-G 10105758-C-G Y*
9944010-G-A 10106401-G-A Y*
9944639-G-C 10107030-G-C Y*
9944766-G-C 10107157-G-C Y*
9946042-T-G 10108433-T-G Y*
9950995-A-G 10113386-A-G Y*
9951639-T-TC 10114030-T-TC *
9951644-T-A 10114035-T-A Y*
9951945-A-G 10114336-A-G Y*
9952019-AT-A 10114410-AT-A *
9953504-T-C 10115895-T-C Y*
9953868-G-A 10116259-G-A Y*
9956692-G-A 10119083-G-A Y*
9956939-G-A 10119330-G-A Y*
9959800-G-C 10122191-G-C Y*
9960369-T-A 10122760-T-A Y*
9961565-G-A 10123956-G-A Y*
9981505-G-A 10143896-G-A Y*
9984160-CTT-C 10146551-CTT-C *
9984172-T-C 10146563-T-C Y*
9989179-G-A 10151570-G-A Y*
9996058-G-C 10158449-G-C Y*
9996092-G-A 10158483-G-A Y*
10003226-C-G 10165617-C-G Y*
10006198-C-T 10168589-C-T FGC82332 Y*
10007710-G-A 10170101-G-A A12358 Y*
10009855-C-T 10172246-C-T Y*
10012314-A-T 10174705-A-T Y*
10014729-A-G 10177120-A-G Y*
10021415-C-CTT 10183806-C-CTT *
10029308-A-T 10191699-A-T Y*
10029340-T-C 10191731-T-C Y*
10036591-C-G 10198982-C-G *
10037655-C-G 10200046-C-G *
10037691-C-T 10200082-C-T *
10037790-C-T 10200181-C-T *
10040974-A-T 10203365-A-T *
10041500-G-A 10203891-G-A *
10041513-T-C 10203904-T-C *
10042415-G-C 10204806-G-C *
10042528-A-C 10204919-A-C *
10042682-C-T 10205073-C-T *
10043272-A-T 10205663-A-T *
10043608-A-C 10205999-A-C *
10043682-T-C 10206073-T-C *
10043706-G-T 10206097-G-T FGC64350 *
10043919-C-G 10206310-C-G *
10043994-G-A 10206385-G-A *
10044014-A-C 10206405-A-C *
10044026-A-C 10206417-A-C *
10044232-G-C 10206623-G-C *
10044235-G-C 10206626-G-C *
10044433-A-G 10206824-A-G *
10044442-T-C 10206833-T-C *
10044469-C-T 10206860-C-T *
10044526-C-T 10206917-C-T *
10044580-T-A 10206971-T-A *
10044616-G-T 10207007-G-T *
10044639-T-C 10207030-T-C *
10048453-T-C 10210844-T-C *
10048858-C-T 10211249-C-T *
10048955-A-T 10211346-A-T *
10049047-G-C 10211438-G-C *
10049069-T-A 10211460-T-A *
10049371-G-T 10211762-G-T *
10049436-A-G 10211827-A-G *
10049487-C-A 10211878-C-A *
10049583-G-T 10211974-G-T *
10050066-C-T 10212457-C-T *
10050262-C-G 10212653-C-G *
10050267-G-A 10212658-G-A *
10050278-G-A 10212669-G-A *
10050631-T-C 10213022-T-C *
10050679-T-C 10213070-T-C *
10050928-A-G 10213319-A-G *
10051033-C-T 10213424-C-T *
10052094-G-T 10214485-G-T *
10055354-A-T 10217745-A-T *
10055468-C-T 10217859-C-T *
10056762-T-G 10219153-T-G *
10056823-T-A 10219214-T-A *
10057046-C-T 10219437-C-T *
10059494-C-T 10221885-C-T *
10059507-A-T 10221898-A-T *
10059544-A-G 10221935-A-G *
10061142-A-G 10223533-A-G *
10061232-A-G 10223623-A-G *
10061251-G-A 10223642-G-A *
10061276-G-A 10223667-G-A FT427052 *
10063533-G-T 10225924-G-T *
10063969-G-A 10226360-G-A *
10064055-G-A 10226446-G-A *
10064070-G-T 10226461-G-T *
10064184-G-A 10226575-G-A *
10064447-A-C 10226838-A-C *
10064973-C-G 10227364-C-G *
10065555-G-C 10227946-G-C *
10065802-T-C 10228193-T-C *
10066668-A-C 10229059-A-C FT427164 *
10066690-C-A 10229081-C-A *
10068204-A-C 10230595-A-C *
13399294-A-C 11243618-A-C *
13399301-C-G 11243625-C-G *
13401188-A-G 11245512-A-G *
13401189-C-T 11245513-C-T *
13403786-C-T 11248110-C-T *
13416290-A-C 11260614-A-C *
13418821-C-A 11263145-C-A *
13420047-C-T 11264371-C-T *
13423949-G-A 11268273-G-A *
13424609-A-C 11268933-A-C *
13428089-C-T 11272413-C-T *
13428588-TC-T 11272912-TC-T *
13431352-C-A 11275676-C-A *
13432946-T-G 11277270-T-G *
13433313-T-C 11277637-T-C *
13433434-A-G 11277758-A-G *
13434287-A-G 11278611-A-G *
13437099-C-T 11281423-C-T *
13440224-G-A 11284548-G-A *
13446232-T-A 11290556-T-A *
13485386-G-T 11329710-G-T *
13628553-T-C 11472877-T-C *
15281995-G-A 13170094-G-A CTS3946 Y*
18156486-G-A 16044606-G-A Y*
22221298-G-A 20059412-G-A Y22889 DYZ19 *
23901052-A-G 21739166-A-G *
23901284-A-T 21739398-A-T *
28580722-G-C 26434575-G-C *
58969803-T-C 56823656-T-C *
59001979-G-A 56855832-G-A *
59002029-C-G 56855882-C-G *
59002455-C-T 56856308-C-T *
59020291-A-G 56874144-A-G *
59027751-G-A 56881604-G-A *
59030061-A-G 56883914-A-G *
59030077-T-C 56883930-T-C *
59031814-A-T 56885667-A-T *
59031833-T-C 56885686-T-C *
59032483-T-C 56886336-T-C *
59032498-T-A 56886351-T-A *
9934935-A-T 10097326-A-T Y*
9961277-C-T 10123668-C-T Y*
10043775-A-T 10206166-A-T *
17055078-G-A 14943198-G-A BY112067 YY*
9958152-A-G 10120543-A-G Y*
13488353-A-T 11332677-A-T *
10044594-T-A 10206985-T-A *
10044601-G-T 10206992-G-T *
10044602-C-T 10206993-C-T *
9952026-G-C 10114417-G-C Y*
10014738-T-C 10177129-T-C Y*
10048846-A-G 10211237-A-G *
22622777-G-A 20460891-G-A Y*
9985805-G-T 10148196-G-T Y*
9995300-C-T 10157691-C-T Y*
9930105-G-C 10092496-G-C Y*
9930106-G-A 10092497-G-A Y*
9944559-C-T 10106950-C-T Y*
10042981-A-G 10205372-A-G *
10043729-G-A 10206120-G-A *
10044614-T-A 10207005-T-A *
10050060-G-T 10212451-G-T *
10071117-G-A 10233508-G-A *
13461470-ATTCACAAAGCCTAGACAAGCGTCCCATCACCTGAGTGATCAATGCAGAGATATGTCACAAAGCC-A 11305794-ATTCACAAAGCCTAGACAAGCGTCCCATCACCTGAGTGATCAATGCAGAGATATGTCACAAAGCC-A *
2671609-G-A 2803568-G-A Y*
2690482-G-A 2822441-G-A YY*
2806644-C-T 2938603-C-T YY*
2832756-T-C 2964715-T-C YY*
2841338-G-A 2973297-G-A YY*
3161957-G-A 3293916-G-A *
3398032-G-A 3529991-G-A *
3868751-C-T 4000710-C-T *
3903087-C-T 4035046-C-T *
3917457-G-A 4049416-G-A *
3936163-C-T 4068122-C-T *
4341080-C-T 4473039-C-T *
4663403-C-T 4795362-C-T *
4924990-C-T 5056949-C-T *
5007175-C-T 5139134-C-T *
5080772-G-A 5212731-G-A *
5770499-C-T 5902458-C-T *
5816445-G-A 5948404-G-A *
5851000-C-T 5982959-C-T *
5851686-G-A 5983645-G-A *
5967134-G-A 6099093-G-A *
5978930-G-A 6110889-G-A *
6043366-C-T 6175325-C-T *
6080115-C-T 6212074-C-T *
6084389-G-A 6216348-G-A *
6515592-G-A 6647551-G-A *
6639306-G-A 6771265-G-A Y*
6658001-C-T 6789960-C-T FT415633 YY*
6672319-C-T 6804278-C-T YY*
6731052-C-A 6863011-C-A Y*
6771049-G-A 6903008-G-A Y*
6780825-C-T 6912784-C-T FGC19178 YY*
6793226-G-A 6925185-G-A YY*
6814109-G-A 6946068-G-A YY*
6852838-G-A 6984797-G-A YY*
6864375-G-GA 6996334-G-GA *
6864379-C-T 6996338-C-T YY*
6868459-C-T 7000418-C-T YY*
6908514-G-A 7040473-G-A YY*
6943365-G-A 7075324-G-A YY*
6952179-G-A 7084138-G-A YY*
6952181-G-A 7084140-G-A YY*
7037892-C-T 7169851-C-T YY*
7037910-C-T 7169869-C-T YY*
7048054-C-T 7180013-C-T YY*
7128791-C-T 7260750-C-T YY*
7140138-G-A 7272097-G-A Y*
7144533-G-A 7276492-G-A YY*
7152177-C-T 7284136-C-T YY*
7164421-G-A 7296380-G-A YY*
7195048-C-T 7327007-C-T YY*
7228219-G-A 7360178-G-A YY*
7236958-C-T 7368917-C-T FT33800 Y*
7243019-G-A 7374978-G-A Y*
7312471-G-A 7444430-G-A YY*
7317156-G-A 7449115-G-A YY*
7344804-C-T 7476763-C-T Y*
7346282-G-A 7478241-G-A Y*
7390181-C-T 7522140-C-T YY*
7428578-C-T 7560537-C-T YY*
7557646-C-T 7689605-C-T YY*
7593388-G-A 7725347-G-A YY*
7594685-C-T 7726644-C-T YY*
7610532-C-T 7742491-C-T YY*
7615989-C-T 7747948-C-T YY*
7718993-C-T 7850952-C-T YY*
7721402-C-T 7853361-C-T YY*
7734413-G-A 7866372-G-A YY*
7815548-G-A 7947507-G-A YY*
7911908-G-A 8043867-G-A YY*
7974735-C-T 8106694-C-T YY*
7996850-G-A 8128809-G-A FT29106 YY*
8032626-G-A 8164585-G-A YY*
8080807-C-T 8212766-C-T YY*
8147930-G-A 8279889-G-A YY*
8199646-C-T 8331605-C-T YY*
8202072-G-A 8334031-G-A YY*
8271810-G-A 8403769-G-A YY*
8281000-G-A 8412959-G-A FT8677 YY*
8290928-C-T 8422887-C-T FT71903 YY*
8309897-C-T 8441856-C-T YY*
8332362-C-T 8464321-C-T YY*
8340535-G-A 8472494-G-A YY*
8355255-C-T 8487214-C-T YY*
8356284-C-T 8488243-C-T BY46946 YY*
8357011-G-A 8488970-G-A YY*
8363407-C-T 8495366-C-T YY*
8402983-G-A 8534942-G-A Z32876 YY*
8443461-C-T 8575420-C-T YY*
8443967-C-T 8575926-C-T YY*
8459541-G-A 8591500-G-A YY*
8470877-G-A 8602836-G-A YY*
8496218-C-T 8628177-C-T YY*
8590193-C-T 8722152-C-T YY*
8598039-C-T 8729998-C-T YY*
8601267-C-T 8733226-C-T YY*
8611189-C-T 8743148-C-T YY*
8621691-G-A 8753650-G-A YY*
8638822-C-T 8770781-C-T YY*
8684744-G-A 8816703-G-A YY*
8731404-G-A 8863363-G-A Y*
8734571-G-A 8866530-G-A BY5034 FGC44168 YY*
8743601-G-A 8875560-G-A YY*
8747701-G-A 8879660-G-A YY*
8792092-G-A 8924051-G-A YY*
8797216-C-A 8929175-C-A YY*
8821180-G-A 8953139-G-A YY*
8873591-C-T 9005550-C-T Y*
8896486-C-T 9028445-C-T Y*
8905292-C-T 9037251-C-T *
8992334-C-T 9154725-C-T FT206976 Y*
9044742-G-A 9207133-G-A Y*
9078026-C-T 9240417-C-T *
9096686-G-A 9259077-G-A Y*
9105262-C-T 9267653-C-T Y*
9138632-C-T 9301023-C-T Y*
9420631-A-G 9583022-A-G YY*
9493930-C-T 9656321-C-T *
9505194-C-T 9667585-C-T *
9851219-G-A 10013610-G-A YY*
9886461-G-A 10048852-G-A YY*
9920463-C-T 10082854-C-T Y*
9930057-G-C 10092448-G-C Y*
9933108-G-A 10095499-G-A Y*
9933118-T-C 10095509-T-C Y*
9933123-G-C 10095514-G-C Y*
9933127-T-C 10095518-T-C Y*
9933196-T-C 10095587-T-C Y*
9933586-G-A 10095977-G-A FT426561 Y*
9935166-A-C 10097557-A-C Y*
9936760-C-A 10099151-C-A Y*
9936761-C-A 10099152-C-A Y*
9939169-C-A 10101560-C-A FT361917 Y*
9939183-A-G 10101574-A-G Y*
9939780-C-T 10102171-C-T Y*
9940553-A-G 10102944-A-G Y*
9940613-T-G 10103004-T-G Y*
9940668-C-A 10103059-C-A Y*
9940691-A-G 10103082-A-G Y*
9942905-A-C 10105296-A-C Y*
9943545-G-A 10105936-G-A Y*
9944596-A-T 10106987-A-T Y*
9944669-C-A 10107060-C-A S3039 Y*
9944722-A-C 10107113-A-C Y*
9944773-A-T 10107164-A-T Y*
9946024-A-AAT 10108415-A-AAT *
9946027-ATG-A 10108418-ATG-A *
9951493-A-T 10113884-A-T Y*
9951494-A-G 10113885-A-G Y*
9951983-G-A 10114374-G-A Z11543 Y*
9953658-A-G 10116049-A-G Y*
9953674-C-T 10116065-C-T Y*
9953803-G-A 10116194-G-A BY82120 Y*
9953969-T-C 10116360-T-C Y*
9954095-G-A 10116486-G-A FGC80741 Y*
9954143-A-C 10116534-A-C Y*
9954223-T-G 10116614-T-G Y*
9956787-A-C 10119178-A-C Y*
9957676-A-C 10120067-A-C Y*
9957685-G-A 10120076-G-A Y*
9957708-A-G 10120099-A-G Y*
9957730-C-G 10120121-C-G Y*
9958914-A-G 10121305-A-G Y*
9960267-A-C 10122658-A-C Y*
9962911-A-G 10125302-A-G Y*
9963428-G-A 10125819-G-A Y*
9964292-C-A 10126683-C-A Y*
9967100-C-A 10129491-C-A Y*
9968021-C-T 10130412-C-T Y*
9985192-C-T 10147583-C-T Y*
9996074-A-G 10158465-A-G Y*
10000060-G-A 10162451-G-A Y*
10012354-G-A 10174745-G-A Y*
10015891-G-T 10178282-G-T Y*
10017934-G-T 10180325-G-T Y*
10018036-C-T 10180427-C-T Y*
10024658-C-T 10187049-C-T BY44363 Y*
10028141-G-A 10190532-G-A Y*
10033471-G-C 10195862-G-C Y*
10033483-C-A 10195874-C-A Y*
10036931-G-A 10199322-G-A *
10042423-A-G 10204814-A-G *
10042449-G-A 10204840-G-A *
10042485-A-C 10204876-A-C *
10042496-G-C 10204887-G-C *
10042518-C-T 10204909-C-T *
10042997-C-T 10205388-C-T *
10043040-A-T 10205431-A-T *
10043091-A-T 10205482-A-T *
10043124-T-G 10205515-T-G *
10043207-G-A 10205598-G-A *
10043289-A-G 10205680-A-G *
10043301-A-T 10205692-A-T *
10043304-T-A 10205695-T-A *
10043670-C-G 10206061-C-G *
10043695-T-G 10206086-T-G *
10043714-C-T 10206105-C-T *
10043715-C-A 10206106-C-A *
10043761-A-G 10206152-A-G *
10044537-C-T 10206928-C-T *
10044588-G-T 10206979-G-T *
10045119-C-A 10207510-C-A *
10045131-C-G 10207522-C-G *
10045180-G-T 10207571-G-T *
10045188-G-A 10207579-G-A *
10045217-A-G 10207608-A-G *
10050091-A-C 10212482-A-C *
10052417-C-T 10214808-C-T *
10059499-T-C 10221890-T-C *
10060698-C-A 10223089-C-A *
10060709-C-T 10223100-C-T *
10061211-A-T 10223602-A-T *
10061287-T-C 10223678-T-C *
10061288-G-A 10223679-G-A *
10061303-C-A 10223694-C-A *
10063365-T-A 10225756-T-A *
10063375-G-C 10225766-G-C *
10063414-C-G 10225805-C-G *
10063420-G-GT 10225811-G-GT *
10063424-A-T 10225815-A-T *
10065361-G-T 10227752-G-T *
10065366-G-C 10227757-G-C *
10065589-C-T 10227980-C-T *
10065599-G-A 10227990-G-A *
10065786-G-A 10228177-G-A *
10065805-G-T 10228196-G-T *
10066739-C-A 10229130-C-A *
10066751-A-G 10229142-A-G *
10081704-G-A 10244095-G-A *
13143452-C-T 10632938-C-T *
13194124-A-C 11038448-A-C *
13212884-G-A 11057208-G-A *
13218719-G-A 11063043-G-A *
13220964-C-T 11065288-C-T FT441155 *
13268056-C-T 11112380-C-T *
13270121-CT-C 11114445-CT-C *
13424624-A-G 11268948-A-G *
13424634-A-C 11268958-A-C *
13424647-T-C 11268971-T-C *
13445121-G-A 11289445-G-A *
13463279-C-A 11307603-C-A *
13463280-T-G 11307604-T-G *
13463323-C-A 11307647-C-A *
13463812-G-A 11308136-G-A *
13463891-C-T 11308215-C-T A13788 *
13468756-T-G 11313080-T-G *
13470573-A-T 11314897-A-T F18175 *
13471329-G-A 11315653-G-A *
13476136-C-A 11320460-C-A *
13476695-G-T 11321019-G-T *
13477245-G-T 11321569-G-T *
13477265-TC-T 11321589-TC-T *
13479410-C-G 11323734-C-G *
13484602-C-A 11328926-C-A *
13484622-A-T 11328946-A-T *
13489989-T-A 11334313-T-A *
13489991-C-T 11334315-C-T *
13601967-G-A 11446291-G-A *
13602998-G-A 11447322-G-A *
13637267-G-A 11481591-G-A *
13689276-C-T 11533600-C-T DYZ17 *
13689649-T-G 11533973-T-G DYZ17 *
13689916-C-A 11534240-C-A DYZ17 *
13718874-C-A 11563198-C-A DYZ17 *
13806555-C-T 11685849-C-T BY47113 DYZ17 *
13807970-C-T 11687264-C-T DYZ17 *
13810636-A-G 11689930-A-G DYZ17 *
13811129-G-C 11690423-G-C DYZ17 *
13815608-G-C 11694902-G-C DYZ17 *
13815622-C-A 11694916-C-A DYZ17 *
13819656-G-T 11698950-G-T DYZ17 *
13842719-A-C 11722013-A-C DYZ17 *
13910100-C-T 11789394-C-T Y*
13924258-G-A 11803552-G-A Y*
13992783-G-A 11872077-G-A YY*
13992939-C-T 11872233-C-T YY*
13999653-C-T 11878947-C-T Y*
14074369-C-T 11953663-C-T Y*
14091214-G-A 11970508-G-A YY*
14100313-G-A 11979607-G-A Y*
14148631-G-A 12027925-G-A YY*
14174577-C-T 12053871-C-T YY*
14174673-G-A 12053967-G-A YY*
14199704-G-A 12078998-G-A YY*
14200254-G-A 12079548-G-A YY*
14222111-C-T 12101405-C-T YY*
14226016-C-T 12105310-C-T YY*
14241379-C-T 12120673-C-T YY*
14243458-G-A 12122752-G-A YY*
14271157-G-T 12150451-G-T Y*
14364920-C-T 12244215-C-T YY*
14367554-C-T 12246850-C-T Y91216 YY*
14384424-C-T 12263720-C-T Y*
14454652-C-T 12333925-C-T BY95854 YY*
14481643-A-G 12360912-A-G YY*
14481645-A-G 12360914-A-G YY*
14481658-A-AG 12360927-A-AG *
14513867-G-A 12402072-G-A Y*
14573711-G-A 12461911-G-A YY*
14734288-G-A 12622356-G-A YY*
14750978-G-A 12639047-G-A FT153811 YY*
14775829-C-T 12663898-C-T BY185203 YY*
14806125-G-A 12694196-G-A YY*
14807853-C-T 12695924-C-T YY*
14821282-C-T 12709349-C-T YY*
14845483-C-T 12733549-C-T YY*
14908049-G-A 12796116-G-A YY*
14928923-G-A 12816988-G-A Y20312 FGC45319 FT9890 YY*
15002397-C-T 12890482-C-T YY*
15042092-G-A 12930182-G-A YY*
15050416-G-A 12938507-G-A FT346528 YY*
15074917-C-T 12963007-C-T YY*
15119690-C-T 13007777-C-T Y*
15157315-C-T 13045402-C-T YY*
15186425-G-A 13074511-G-A Y*
15186430-G-A 13074516-G-A Y*
15186812-C-T 13074898-C-T Y*
15205008-G-A 13093094-G-A YY*
15210726-G-A 13098812-G-A Y50405 YY*
15228835-G-A 13116921-G-A FT168857 Y*
15360448-G-A 13248568-G-A YY*
15411830-G-A 13299950-G-A YY*
15413609-G-A 13301729-G-A FTA23662 YY*
15416950-G-A 13305070-G-A Y40970 YY*
15453626-G-A 13341746-G-A BY101641 YY*
15505966-G-A 13394086-G-A YY*
15540966-C-T 13429086-C-T YY*
15544896-G-A 13433016-G-A YY*
15554634-C-T 13442754-C-T YY*
15594047-G-A 13482167-G-A YY*
15711855-G-A 13599975-G-A YY*
15726174-G-A 13614294-G-A FT72206 YY*
15802493-G-A 13690613-G-A YY*
15820205-G-A 13708325-G-A Y68965 YY*
15849487-G-A 13737607-G-A YY*
15896378-G-A 13784498-G-A BY104772 YY*
15896521-C-T 13784641-C-T YY*
15900697-G-A 13788817-G-A YY*
15904770-C-T 13792890-C-T YY*
15926200-G-A 13814320-G-A YY*
15957695-G-A 13845815-G-A YY*
15985986-G-A 13874106-G-A Y*
16002889-C-T 13891009-C-T Y*
16005532-G-A 13893652-G-A Y69248 Y*
16008624-G-A 13896744-G-A Y*
16036899-G-A 13925019-G-A YY*
16042661-C-T 13930781-C-T YY*
16047339-C-T 13935459-C-T Y*
16056038-G-T 13944158-G-T Y*
16076672-C-T 13964792-C-T Y69335 Y*
16089752-C-T 13977872-C-T Y*
16132986-C-T 14021106-C-T P8_Spc *
16172473-C-T 14060593-C-T Y*
16190439-G-A 14078559-G-A YY*
16219547-C-T 14107667-C-T YY*
16224651-C-T 14112771-C-T Y51532 YY*
16228962-G-A 14117082-G-A YY*
16238566-G-A 14126686-G-A YY*
16250051-C-T 14138171-C-T YY*
16293908-C-T 14182028-C-T YY*
16299233-C-T 14187353-C-T YY*
16371792-C-T 14259912-C-T YY*
16382038-C-T 14270158-C-T Y*
16413015-G-T 14301135-G-T YY*
16437216-C-T 14325336-C-T YY*
16441832-G-A 14329952-G-A FTA53451 YY*
16456032-G-A 14344152-G-A YY*
16459279-C-T 14347399-C-T FGC13172 YY*
16460791-C-T 14348911-C-T YY*
16468988-G-A 14357108-G-A Y*
16506730-G-A 14394850-G-A YY*
16557735-G-A 14445855-G-A YY*
16564684-G-A 14452804-G-A YY*
16606678-C-T 14494798-C-T YY*
16606691-C-T 14494811-C-T YY*
16637754-G-A 14525874-G-A YY*
16665968-G-A 14554088-G-A YY*
16667467-C-T 14555587-C-T YY*
16718504-G-A 14606624-G-A YY*
16723331-G-A 14611451-G-A Y*
16756892-C-T 14645012-C-T YY*
16762685-C-T 14650805-C-T YY*
16788030-G-A 14676150-G-A FTB66794 YY*
16792964-C-T 14681084-C-T YY*
16806810-G-A 14694930-G-A YY*
16841617-G-A 14729737-G-A YY*
16846251-G-A 14734371-G-A YY*
16855948-G-A 14744068-G-A YY*
16866819-G-A 14754939-G-A YY*
16927342-G-A 14815462-G-A YY*
17015714-C-T 14903834-C-T YY*
17029504-G-A 14917624-G-A BY41595BY41857 YY*
17049339-G-A 14937459-G-A YY*
17078658-G-A 14966778-G-A YY*
17084410-C-T 14972530-C-T Y*
17181276-C-T 15069396-C-T YY*
17185986-C-T 15074106-C-T YY*
17219215-C-T 15107335-C-T Y*
17224985-C-T 15113105-C-T BY30944Y41901 YY*
17240734-G-A 15128854-G-A YY*
17247870-G-A 15135990-G-A Y*
17253659-G-A 15141779-G-A YY*
17274371-C-T 15162491-C-T FTA8235 YY*
17298461-C-T 15186581-C-T YY*
17308365-C-T 15196485-C-T YY*
17322976-G-A 15211096-G-A YY*
17325509-C-T 15213629-C-T YY*
17328185-G-A 15216305-G-A YY*
17351573-C-T 15239693-C-T YY*
17360741-C-T 15248861-C-T YY*
17394687-C-T 15282807-C-T YY*
17430827-C-T 15318947-C-T Y*
17456835-G-A 15344955-G-A YY*
17462741-C-T 15350861-C-T YY*
17504555-G-A 15392675-G-A Y*
17508886-C-T 15397006-C-T YY*
17538974-C-T 15427094-C-T Y*
17586595-C-T 15474715-C-T YY*
17602330-G-A 15490450-G-A YY*
17670594-G-A 15558714-G-A YY*
17691208-C-T 15579328-C-T YY*
17705098-G-A 15593218-G-A YY*
17720408-G-A 15608528-G-A YY*
17721514-G-A 15609634-G-A YY*
17723752-C-T 15611872-C-T Y*
17733603-G-A 15621723-G-A Y*
17880204-C-T 15768324-C-T YY*
17909197-G-A 15797317-G-A YY*
17957309-C-T 15845429-C-T YY*
17971656-C-T 15859776-C-T YY*
17977172-G-A 15865292-G-A Y*
18044855-C-T 15932975-C-T YY*
18051855-G-A 15939975-G-A YY*
18051856-G-A 15939976-G-A YY*
18070165-G-A 15958285-G-A BY119670 YY*
18105364-C-T 15993484-C-T YY*
18116050-G-A 16004170-G-A YY*
18121780-C-T 16009900-C-T YY*
18160626-G-A 16048746-G-A YY*
18166683-C-A 16054803-C-A YY*
18171115-G-A 16059235-G-A YY*
18232274-G-A 16120394-G-A BY121031 Y*
18269035-C-T 16157155-C-T YSC0000937 *
18386915-G-A 16275035-G-A P6_Gap *
18400805-C-T 16288925-C-T P6_Gap *
18550148-G-A 16438268-G-A Y*
18550150-G-A 16438270-G-A Y*
18564079-C-T 16452199-C-T YY*
18699116-C-T 16587236-C-T YY*
18703416-G-A 16591536-G-A YY*
18705070-C-T 16593190-C-T YY*
18723160-G-A 16611280-G-A YY*
18727335-C-T 16615455-C-T YY*
18729318-C-T 16617438-C-T YY*
18732797-G-A 16620917-G-A FTA40772 YY*
18774966-C-T 16663086-C-T YY*
18810518-C-T 16698638-C-T YY*
18823555-C-T 16711675-C-T YY*
18824503-C-T 16712623-C-T YY*
18864830-G-A 16752950-G-A YY*
18898222-C-T 16786342-C-T YY*
18921704-C-T 16809824-C-T YY*
18943622-G-A 16831742-G-A YY*
18997398-G-A 16885518-G-A YY*
19115050-C-T 17003170-C-T YY*
19143417-C-T 17031537-C-T YY*
19196494-C-T 17084614-C-T YY*
19199208-G-A 17087328-G-A YY*
19218679-G-A 17106799-G-A YY*
19285807-G-A 17173927-G-A FT129153 YY*
19321544-G-A 17209664-G-A YY*
19324218-G-A 17212338-G-A YY*
19414946-C-T 17303066-C-T YY*
19459428-G-A 17347548-G-A Y*
20812678-C-T 18650792-C-T P4_Gap *
20822820-C-T 18660934-C-T P4_Gap *
21190806-C-T 19028920-C-T YY*
21218778-G-A 19056892-G-A YY*
21221030-C-T 19059144-C-T Y*
21264772-C-T 19102886-C-T FTA46651 YY*
21295183-G-A 19133297-G-A Y105996 YY*
21306886-G-A 19145000-G-A YY*
21309705-C-T 19147819-C-T YY*
21319973-G-A 19158087-G-A YY*
21336339-G-A 19174453-G-A Y*
21342375-G-A 19180489-G-A YY*
21401897-G-A 19240011-G-A YY*
21413968-C-T 19252082-C-T YY*
21447140-C-T 19285254-C-T YY*
21453881-G-A 19291995-G-A FT213410 YY*
21455230-G-A 19293344-G-A FT25376 YY*
21509399-G-A 19347513-G-A YY*
21559792-G-A 19397906-G-A Z18978 GG300 YY*
21589474-C-T 19427588-C-T YY*
21636056-G-A 19474170-G-A YY*
21656470-G-A 19494584-G-A YY*
21703858-G-A 19541972-G-A YY*
21719386-G-A 19557500-G-A YY*
21741015-C-T 19579129-C-T YY*
21762762-C-T 19600876-C-T YY*
21765467-G-A 19603581-G-A YY*
21765937-C-T 19604051-C-T YY*
21767131-C-T 19605245-C-T YY*
21767662-G-A 19605776-G-A YY*
21776711-C-T 19614825-C-T YY*
21790718-G-A 19628832-G-A Y*
21825182-G-A 19663296-G-A YY*
21877435-G-A 19715549-G-A YY*
21886545-G-A 19724659-G-A Y*
21893937-C-T 19732051-C-T YY*
21947121-C-T 19785235-C-T YY*
21994235-G-A 19832349-G-A YY*
22010804-C-T 19848918-C-T YY*
22057164-G-A 19895278-G-A FT2220 Y*
22062825-C-T 19900939-C-T YY*
22065752-G-A 19903866-G-A YY*
22078009-G-A 19916123-G-A YY*
22087231-C-T 19925345-C-T YY*
22110230-G-A 19948344-G-A YY*
22133260-G-A 19971374-G-A YY*
22135854-G-A 19973968-G-A YY*
22138884-G-A 19976998-G-A YY*
22142583-C-T 19980697-C-T YY*
22288313-C-T 20126427-C-T DYZ19 *
22519268-G-A 20357382-G-A Y*
22548544-C-T 20386658-C-T YY*
22548859-G-A 20386973-G-A YY*
22561943-C-T 20400057-C-T YY*
22580373-G-A 20418487-G-A YY*
22595674-G-A 20433788-G-A YY*
22615552-C-T 20453666-C-T YY*
22702298-C-T 20540412-C-T YY*
22728397-G-A 20566511-G-A YY*
22801761-C-T 20639875-C-T YY*
22840107-C-T 20678221-C-T Y*
22841205-C-T 20679319-C-T Y*
22864069-C-T 20702183-C-T YY*
22886350-C-T 20724464-C-T YY*
22902265-C-T 20740379-C-T YY*
22969024-C-T 20807138-C-T YY*
22996105-C-T 20834219-C-T YY*
23005816-C-T 20843930-C-T Y*
23008321-C-T 20846435-C-T Y*
23023549-G-A 20861663-G-A YY*
23060209-C-T 20898323-C-T YY*
23105377-G-A 20943491-G-A Y*
23131241-G-A 20969355-G-A YY*
23136833-C-T 20974947-C-T YY*
23248335-C-T 21086449-C-T YY*
23255525-C-T 21093639-C-T YY*
23255563-C-T 21093677-C-T YY*
23270794-G-A 21108908-G-A YY*
23279868-C-T 21117982-C-T YY*
23328019-G-A 21166133-G-A YY*
23337323-G-A 21175437-G-A YY*
23366842-C-T 21204956-C-T YY*
23369098-G-A 21207212-G-A BY144852 YY*
23419276-G-A 21257390-G-A YY*
23544088-C-T 21382202-C-T YY*
23547295-G-A 21385409-G-A YY*
23584190-C-T 21422304-C-T YY*
23589460-C-T 21427574-C-T YY*
23742418-C-T 21580532-C-T *
23748235-C-T 21586349-C-T Y*
23748236-C-T 21586350-C-T Y*
23826593-G-A 21664707-G-A Y*
23884493-G-A 21722607-G-A Y*
23901314-T-C 21739428-T-C S25976 *
23953225-G-A 21807078-G-A *
23957684-C-T 21811537-C-T *
23959181-C-T 21813034-C-T Y*
24361396-G-A 22215249-G-A *
24423407-G-A 22277260-G-A Y*
24478034-G-A 22331887-G-A A18030 Y*
24504324-C-T 22358177-C-T *
24513556-C-T 22367409-C-T *
24874064-G-A 22727917-G-A g1 *
28474826-G-A 26328679-G-A *
28504698-C-T 26358551-C-T Y*
28580721-A-C 26434574-A-C *
28590514-C-T 26444367-C-T *
28603332-C-T 26457185-C-T *
28603334-C-T 26457187-C-T *
28605127-G-A 26458980-G-A *
28623855-G-A 26477708-G-A Y*
28660596-G-A 26514449-G-A *
28663823-C-T 26517676-C-T *
28754628-G-A 26608481-G-A *
28786001-G-A 26639854-G-A *
28797309-A-G 26651162-A-G *
58968245-T-G 56822098-T-G *
58974884-TC-T 56828737-TC-T *
59001950-A-T 56855803-A-T *
59002067-T-A 56855920-T-A *
59002439-T-C 56856292-T-C *
59027259-A-G 56881112-A-G *
10011019-C-T 10173410-C-T **
9995943-C-G 10158334-C-G **
17847709-C-T 15735829-C-T BY117786 ***
9963448-C-T 10125839-C-T ***
13855366-A-G 11734660-A-G DYZ17 ***
13688829-T-C 11533153-T-C DYZ17 ***
13440626-G-A 11284950-G-A ***
9986943-A-G 10149334-A-G ***
13440600-T-C 11284924-T-C ***
10017426-C-T 10179817-C-T ***
13401705-C-A 11246029-C-A ***
23237100-G-A 21075214-G-A FGC20951 ***
10018220-A-G 10180611-A-G FGC57105 ***
10066744-T-C 10229135-T-C ***
9950862-T-G 10113253-T-G ***
13628573-G-T 11472897-G-T ***
7127156-T-C 7259115-T-C M8158 ***
10064277-G-C 10226668-G-C ***
10064250-T-C 10226641-T-C ***
10033890-A-C 10196281-A-C ***
10071874-T-A 10234265-T-A ***
13457955-C-G 11302279-C-G ***
13634919-A-T 11479243-A-T ***
13802380-C-A 11681674-C-A DYZ17 ***
9959226-A-T 10121617-A-T ***
9959233-G-T 10121624-G-T ***
8491786-C-T 8623745-C-T Y63907 ***
9941014-C-G 10103405-C-G ***
9951430-A-G 10113821-A-G ***
9956471-G-A 10118862-G-A ***
9956481-T-G 10118872-T-G ***
9976228-C-G 10138619-C-G ***
9976935-C-T 10139326-C-T ***
9981169-G-T 10143560-G-T ***
9984188-G-A 10146579-G-A ***
9984190-C-T 10146581-C-T FT373749 ***
9995929-C-T 10158320-C-T BY30126 ***
10022310-C-G 10184701-C-G ***
10029237-A-G 10191628-A-G ***
10038824-A-T 10201215-A-T ***
10049524-C-T 10211915-C-T ***
10063547-A-G 10225938-A-G ***
13405493-G-A 11249817-G-A ***
13418936-A-T 11263260-A-T ***
13424702-G-T 11269026-G-T ***
13429151-G-A 11273475-G-A ***
13461286-G-C 11305610-G-C ***
13468911-T-G 11313235-T-G ***
13489230-A-T 11333554-A-T ***
14460403-AAG-A 12339676-AAG-A ***
15899059-G-A 13787179-G-A FT329792 ***
59002093-T-C 56855946-T-C ***
59013702-C-T 56867555-C-T ***
59029406-G-A 56883259-G-A ***
59030119-C-T 56883972-C-T ***
59030697-T-A 56884550-T-A ***
59031393-A-G 56885246-A-G ***
2721198-G-A 2853157-G-A ***
2745222-C-T 2877181-C-T ***
2778440-G-A 2910399-G-A ***
2839213-G-A 2971172-G-A ***
2839214-G-A 2971173-G-A ***
2848177-C-T 2980136-C-T ***
2853940-G-A 2985899-G-A ***
3229845-C-T 3361804-C-T ***
3277227-C-T 3409186-C-T ***
3388169-C-T 3520128-C-T ***
3520616-C-T 3652575-C-T ***
3715880-G-A 3847839-G-A ***
3718438-G-A 3850397-G-A ***
3726274-G-A 3858233-G-A ***
3959077-C-T 4091036-C-T ***
3998466-G-A 4130425-G-A ***
4078526-C-T 4210485-C-T ***
4365807-C-T 4497766-C-T ***
4588286-G-A 4720245-G-A ***
4805801-C-A 4937760-C-A ***
5594860-G-A 5726819-G-A ***
5720118-G-A 5852077-G-A ***
5821691-C-T 5953650-C-T ***
5901976-C-T 6033935-C-T ***
5943265-C-T 6075224-C-T ***
6047489-G-A 6179448-G-A ***
6050578-C-T 6182537-C-T ***
6402392-G-A 6534351-G-A ***
6473594-G-A 6605553-G-A ***
6495535-C-T 6627494-C-T ***
6664300-T-C 6796259-T-C ***
6692359-C-T 6824318-C-T ***
6695975-C-T 6827934-C-T ***
6699998-G-A 6831957-G-A ***
6704005-G-A 6835964-G-A ***
6736341-C-T 6868300-C-T ***
6769266-C-T 6901225-C-T ***
6788963-G-A 6920922-G-A ***
6802733-G-A 6934692-G-A ***
6904826-C-T 7036785-C-T FT14457 ***
6937726-C-T 7069685-C-T ***
6981219-C-T 7113178-C-T ***
6990271-G-T 7122230-G-T ***
7093078-G-A 7225037-G-A ***
7121211-G-A 7253170-G-A ***
7138840-C-T 7270799-C-T ***
7198507-G-A 7330466-G-A ***
7216517-C-T 7348476-C-T ***
7323784-G-A 7455743-G-A ***
7329970-G-A 7461929-G-A ***
7372638-C-T 7504597-C-T ***
7389997-G-A 7521956-G-A ***
7623176-C-T 7755135-C-T ***
7715978-C-A 7847937-C-A ***
7823520-G-A 7955479-G-A ***
7827349-C-T 7959308-C-T ***
7839450-G-A 7971409-G-A ***
7907400-C-T 8039359-C-T ***
8019486-G-A 8151445-G-A ***
8022000-C-T 8153959-C-T ***
8109065-G-A 8241024-G-A FT57552 ***
8133640-G-A 8265599-G-A ***
8150901-G-A 8282860-G-A ***
8213505-C-T 8345464-C-T ***
8243186-C-T 8375145-C-T ***
8243666-G-A 8375625-G-A ***
8359091-G-A 8491050-G-A ***
8417097-G-A 8549056-G-A ***
8479729-C-T 8611688-C-T ***
8491266-A-G 8623225-A-G ***
8580303-G-A 8712262-G-A ***
8598968-C-T 8730927-C-T ***
8687822-C-T 8819781-C-T ***
8827215-C-T 8959174-C-T ***
8895867-C-T 9027826-C-T ***
8907494-G-A 9039453-G-A ***
8911318-C-T 9043277-C-T ***
9830089-C-T 9992480-C-T ***
9931444-A-C 10093835-A-C ***
9933651-A-G 10096042-A-G ***
9937798-CA-C 10100189-CA-C ***
9939576-C-T 10101967-C-T ***
9940698-C-A 10103089-C-A ***
9944628-G-A 10107019-G-A ***
9945091-GCA-G 10107482-GCA-G ***
9946044-C-A 10108435-C-A ***
9946102-T-C 10108493-T-C ***
9950522-C-A 10112913-C-A ***
9950573-G-A 10112964-G-A ***
9951932-A-G 10114323-A-G ***
9957957-C-A 10120348-C-A ***
9964038-T-C 10126429-T-C ***
9964269-T-A 10126660-T-A ***
9976244-A-T 10138635-A-T ***
9985011-T-A 10147402-T-A ***
9985013-G-A 10147404-G-A ***
10022287-C-T 10184678-C-T BY83087 ***
10037896-C-T 10200287-C-T ***
10038898-G-A 10201289-G-A ***
10038904-A-G 10201295-A-G ***
10043100-C-T 10205491-C-T ***
10043165-T-A 10205556-T-A ***
10043634-T-C 10206025-T-C ***
10043870-G-A 10206261-G-A ***
10044467-C-A 10206858-C-A ***
10049544-A-G 10211935-A-G ***
10057385-C-T 10219776-C-T ***
10057389-C-T 10219780-C-T ***
10057432-G-T 10219823-G-T ***
10064280-A-G 10226671-A-G ***
10065008-C-A 10227399-C-A ***
10075685-G-C 10238076-G-C ***
10075701-C-G 10238092-C-G ***
13326200-G-A 11170524-G-A ***
13381622-G-A 11225946-G-A ***
13400906-T-A 11245230-T-A ***
13438923-C-T 11283247-C-T ***
13445510-T-C 11289834-T-C ***
13454602-G-A 11298926-G-A FGC33693 ***
13463790-G-C 11308114-G-C ***
13464412-C-T 11308736-C-T ***
13464413-C-T 11308737-C-T ***
13469198-T-A 11313522-T-A ***
13469438-T-A 11313762-T-A ***
13470068-C-A 11314392-C-A ***
13470880-G-A 11315204-G-A ***
13470897-G-A 11315221-G-A ***
13661022-A-C 11505346-A-C DYZ17 ***
13675055-C-T 11519379-C-T DYZ17 ***
13685031-G-A 11529355-G-A DYZ17 ***
13688788-A-T 11533112-A-T DYZ17 ***
13745679-G-T 11590003-G-T DYZ17 ***
13852847-G-A 11732141-G-A DYZ17 ***
13861390-G-A 11740684-G-A DYZ17 ***
13862955-G-A 11742249-G-A DYZ17 ***
13865280-C-A 11744574-C-A DYZ17 ***
13865870-G-A 11745164-G-A DYZ17 ***
13954375-G-A 11833669-G-A ***
14121240-G-A 12000534-G-A ***
14121255-G-A 12000549-G-A ***
14174957-C-T 12054251-C-T ***
14273521-C-T 12152815-C-T ***
14327860-G-A 12207154-G-A ***
14330195-G-A 12209489-G-A ***
14358425-C-T 12237720-C-T ***
14386905-G-A 12266201-G-A ***
14462772-G-A 12342045-G-A ***
14464644-C-T 12343917-C-T FT411920 ***
14532719-C-T 12420920-C-T ***
14593743-G-A 12481943-G-A ***
14792388-G-A 12680459-G-A Y92213 ***
14806499-T-C 12694570-T-C ***
14908552-C-T 12796619-C-T ***
14923997-C-T 12812062-C-T ***
15044364-G-A 12932454-G-A ***
15132445-G-A 13020532-G-A ***
15169030-G-A 13057116-G-A ***
15180983-G-A 13069069-G-A ***
15221611-C-T 13109697-C-T ***
15276713-G-A 13164802-G-A ***
15426965-C-T 13315085-C-T ***
15446362-G-A 13334482-G-A ***
15475738-G-A 13363858-G-A ***
15587328-C-T 13475448-C-T ***
15590053-C-T 13478173-C-T ***
15600818-C-T 13488938-C-T ***
15620328-G-A 13508448-G-A ***
15636812-A-G 13524932-A-G ***
15663872-C-T 13551992-C-T ***
15699890-C-A 13588010-C-A ***
15753620-G-A 13641740-G-A ***
15914822-C-T 13802942-C-T FT343343 ***
15932457-C-T 13820577-C-T ***
15932475-C-T 13820595-C-T ***
16020146-C-T 13908266-C-T BY105459 ***
16085692-G-A 13973812-G-A ***
16201716-G-A 14089836-G-A Y95591 ***
16330087-C-T 14218207-C-T ***
16349184-C-T 14237304-C-T ***
16350702-G-A 14238822-G-A BY107158 ***
16380061-G-A 14268181-G-A ***
16441611-C-T 14329731-C-T ***
16463386-G-A 14351506-G-A ***
16506581-C-T 14394701-C-T ***
16599696-G-A 14487816-G-A ***
16693673-G-A 14581793-G-A ***
16770279-A-AT 14658399-A-AT ***
16842467-G-A 14730587-G-A ***
16861953-G-A 14750073-G-A ***
16906466-G-A 14794586-G-A ***
16941534-C-T 14829654-C-T ***
17058488-C-T 14946608-C-T ***
17108919-C-T 14997039-C-T ***
17266260-C-T 15154380-C-T ***
17403318-C-T 15291438-C-T ***
17463083-G-A 15351203-G-A ***
17480436-G-A 15368556-G-A ***
17494302-G-A 15382422-G-A ***
17588804-G-A 15476924-G-A FT205023 ***
17771843-G-T 15659963-G-T ***
17832415-G-A 15720535-G-A ***
17847706-C-T 15735826-C-T S991 ***
18017226-C-T 15905346-C-T ***
18042300-C-T 15930420-C-T ***
18059716-G-A 15947836-G-A ***
18107279-G-A 15995399-G-A Y101324 ***
18129664-G-A 16017784-G-A FT280018 ***
18134407-C-T 16022527-C-T ***
18145351-G-A 16033471-G-A ***
18170428-C-T 16058548-C-T ***
18194064-G-A 16082184-G-A ***
18413503-C-T 16301623-C-T P6_Gap ***
18559539-C-T 16447659-C-T ***
18583356-G-A 16471476-G-A ***
18663614-G-A 16551734-G-A ***
18871109-C-T 16759229-C-T ***
18927011-C-T 16815131-C-T ***
18984827-G-A 16872947-G-A ***
18988570-G-A 16876690-G-A ***
19039515-C-T 16927635-C-T ***
19040743-G-A 16928863-G-A ***
19050290-C-T 16938410-C-T ***
19107520-C-T 16995640-C-T ***
19130620-G-A 17018740-G-A ***
19263929-G-A 17152049-G-A ***
19337946-G-A 17226066-G-A FGC35499 ***
19469054-C-T 17357174-C-T ***
19469708-C-T 17357828-C-T ***
19519086-C-T 17407206-C-T ***
21148993-G-A 18987107-G-A ***
21164547-C-T 19002661-C-T ***
21176769-C-T 19014883-C-T ***
21176778-C-T 19014892-C-T ***
21297734-G-A 19135848-G-A ***
21390091-G-A 19228205-G-A ***
21591796-G-A 19429910-G-A FTA15062 ***
21770062-C-T 19608176-C-T ***
21776911-G-A 19615025-G-A ***
21885972-G-A 19724086-G-A ***
21886643-G-A 19724757-G-A ***
21907411-G-A 19745525-G-A ***
22006511-C-T 19844625-C-T ***
22031950-C-T 19870064-C-T ***
22052626-G-A 19890740-G-A ***
22147436-G-A 19985550-G-A ***
22171325-A-G 20009439-A-G ***
22171334-T-TG 20009448-T-TG ***
22573467-C-T 20411581-C-T ***
22616389-C-T 20454503-C-T ***
22679552-C-T 20517666-C-T ***
22729953-G-A 20568067-G-A ***
22737667-C-T 20575781-C-T ***
22742391-C-T 20580505-C-T ***
22753085-C-T 20591199-C-T ***
22755863-G-A 20593977-G-A ***
22759110-G-A 20597224-G-A ***
22763964-C-T 20602078-C-T ***
22767033-G-A 20605147-G-A ***
22778464-G-A 20616578-G-A ***
22936776-C-T 20774890-C-T ***
22957214-C-T 20795328-C-T ***
22991790-G-A 20829904-G-A ***
23197138-G-A 21035252-G-A ***
23240167-C-T 21078281-C-T ***
23381004-C-T 21219118-C-T ***
23404057-G-T 21242171-G-T ***
23490995-G-T 21329109-G-T ***
23494603-C-T 21332717-C-T ***
23806335-G-T 21644449-G-T BY147850 ***
23824505-C-T 21662619-C-T ***
23981412-C-T 21835265-C-T ***
23983255-C-T 21837108-C-T ***
24477821-G-A 22331674-G-A ***
24500233-G-A 22354086-G-A ***
28508984-C-T 26362837-C-T ***
28545806-G-A 26399659-G-A ***
28552749-G-A 26406602-G-A ***
28589379-G-A 26443232-G-A ***
28590943-C-T 26444796-C-T ***
28639844-T-A 26493697-T-A ***
28702255-C-T 26556108-C-T ***
28732168-C-T 26586021-C-T ***
28785973-AT-A 26639826-AT-A ***
28814337-G-A 26668190-G-A ***
59002073-C-T 56855926-C-T ***
59003204-AAAT-A 56857057-AAAT-A ***
59003210-A-C 56857063-A-C ***
59027650-A-T 56881503-A-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual5275051-C-G5407010-C-G2G
Manual22200784-C-G20038898-C-G1G
Manual16050996-CTCTT-C13939116-CTCTT-COne positive read and one negative read for this STR deletion.
Manual6660370-G-A6792329-G-A9A
Manual6781023-GT-G6912982-GT-GAll 5 reads show the deletion.
Manual8773533-A-G8905492-A-G7G
Manual14774289-G-A12662358-G-A3A
Manual16643054-C-T14531174-C-T5T