McCarthy
FTDNA: 71719, BigY3: 71719, BigY2: 71719MDKA Birth: Ireland 1820
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 71719 | BigY3 71719 | BigY2 71719 |
---|---|---|---|---|---|---|---|---|---|---|
18289053-C-T | 16177173-C-T | P6_Prx | *** | A* | A* | |||||
26030659-A-G | 23884512-A-G | P1_Y1 | *** | A* | A* | |||||
22265456-G-T | 20103570-G-T | DYZ19 | A* | A* | ||||||
13450795-C-G | 11295119-C-G | A* | ||||||||
16097602-A-C | 13985722-A-C | P8_Prx | 8×C | A* | ||||||
13450652-T-G | 11294976-T-G | A* | ||||||||
18352881-T-C | 16241001-T-C | P6_Prx | A* | |||||||
19646467-A-G | 17534587-A-G | P5_Prx | A* | |||||||
20510195-G-C | 18348309-G-C | P5_Dst | A* | |||||||
6853559-C-T | 6985518-C-T | A15824 | Y | Y | + | + | + | |||
7617414-A-G | 7749373-A-G | A15825 | Y | Y | + | + | + | |||
8634403-C-A | 8766362-C-A | A15826 | Y | Y | + | + | ||||
16324495-A-G | 14212615-A-G | A15827 | Y | Y | + | + | + | |||
16360100-C-T | 14248220-C-T | A15828 | Y | Y | + | + | + | |||
17210149-C-T | 15098269-C-T | A15829 | Y | Y | + | + | + | |||
2759790-A-G | 2891749-A-G | FT94838 | Y | Y | + | |||||
4722152-C-G | 4854111-C-G | FT95468 | + | |||||||
5934305-C-T | 6066264-C-T | FT95910 | + | |||||||
3482498-G-A | 3614457-G-A | * | ||||||||
5426081-C-T | 5558040-C-T | FT52532 | * | |||||||
22309972-T-A | 20148086-T-A | DYZ19 | ** | |||||||
13485707-C-A | 11330031-C-A | ** | ||||||||
16150137-T-A | 14038257-T-A | P8_Dst | ** | |||||||
5308797-TATAG-T | 5440756-TATAG-T | ** | ||||||||
14757394-C-A | 12645463-C-A | ** | ||||||||
11022117-ATTC-A | ** | |||||||||
11022137-A-C | ** | |||||||||
8408482-C-A | 8540441-C-A | ** | ||||||||
9013092-TAA-T | 9175483-TAA-T | ** | ||||||||
16608-A-T | ** | |||||||||
15671150-C-A | 13559270-C-A | ** | ||||||||
15109093-C-A | 12997180-C-A | ** | ||||||||
8159002-C-A | 8290961-C-A | ** | ||||||||
17342898-C-A | 15231018-C-A | ** | ||||||||
15789035-C-A | 13677155-C-A | ** | ||||||||
18990401-C-A | 16878521-C-A | ** | ||||||||
4301977-C-A | 4433936-C-A | ** | ||||||||
10892550-T-A | ** | |||||||||
13953116-C-A | 11832410-C-A | ** | ||||||||
10985357-A-T | ** | |||||||||
10937074-G-T | ** | |||||||||
6769890-C-A | 6901849-C-A | ** | ||||||||
13487757-C-T | 11332081-C-T | ** | ||||||||
10921656-C-A | ** | |||||||||
11014899-C-A | ** | |||||||||
8095559-C-A | 8227518-C-A | ** | ||||||||
16768530-T-A | 14656650-T-A | ** | ||||||||
15870559-C-A | 13758679-C-A | ** | ||||||||
18848544-G-T | 16736664-G-T | ** | ||||||||
16868735-C-T | 14756855-C-T | ** | ||||||||
15397116-G-T | 13285236-G-T | ** | ||||||||
15495307-C-A | 13383427-C-A | ** | ||||||||
10902538-G-C | ** | |||||||||
10784678-C-A | ** | |||||||||
23475646-C-A | 21313760-C-A | ** | ||||||||
11010661-T-C | ** | |||||||||
10969228-T-C | ** | |||||||||
10969249-T-A | ** | |||||||||
17181838-C-A | 15069958-C-A | ** | ||||||||
14312201-C-A | 12191495-C-A | ** | ||||||||
26563900-G-T | 24417753-G-T | P1_g2 | ** | |||||||
14339241-C-A | 12218536-C-A | ** | ||||||||
22077181-C-A | 19915295-C-A | ** | ||||||||
14537917-C-A | 12426118-C-A | ** | ||||||||
17685787-C-A | 15573907-C-A | ** | ||||||||
5216427-C-A | 5348386-C-A | ** | ||||||||
10669695-C-A | ** | |||||||||
16720003-C-A | 14608123-C-A | ** | ||||||||
5644707-C-A | 5776666-C-A | ** | ||||||||
16379111-C-A | 14267231-C-A | ** | ||||||||
22884945-AT-A | 20723059-AT-A | 9×T | ** | |||||||
10921473-C-A | ** | |||||||||
13612120-C-A | 11456444-C-A | ** | ||||||||
18814863-C-A | 16702983-C-A | ** | ||||||||
22809955-C-A | 20648069-C-A | ** | ||||||||
21042192-C-A | 18880306-C-A | ** | ||||||||
10980139-C-A | ** | |||||||||
28794192-G-T | 26648045-G-T | ** | ||||||||
9943527-C-A | 10105918-C-A | ** | ||||||||
10821961-C-A | ** | |||||||||
10764827-C-A | ** | |||||||||
9927340-C-A | 10089731-C-A | ** | ||||||||
11021911-A-C | ** | |||||||||
5249785-C-A | 5381744-C-A | ** | ||||||||
13854608-C-A | 11733902-C-A | FT98014 | DYZ17 | ** | ||||||
16070101-T-A | 13958221-T-A | ** | ||||||||
14554404-C-A | 12442605-C-A | ** | ||||||||
28744997-C-A | 26598850-C-A | ** | ||||||||
7044071-C-A | 7176030-C-A | ** | ||||||||
10672572-G-T | ** | |||||||||
13505396-C-A | 11349720-C-A | ** | ||||||||
15734234-C-A | 13622354-C-A | ** | ||||||||
14046818-G-A | 11926112-G-A | ** | ||||||||
2701276-C-A | 2833235-C-A | ** | ||||||||
2701281-C-A | 2833240-C-A | ** | ||||||||
3060357-C-A | 3192316-C-A | ** | ||||||||
3089041-C-A | 3221000-C-A | ** | ||||||||
3092792-G-C | 3224751-G-C | ** | ||||||||
3178217-G-T | 3310176-G-T | ** | ||||||||
3205327-G-T | 3337286-G-T | ** | ||||||||
3246447-G-A | 3378406-G-A | ** | ||||||||
3405428-A-G | 3537387-A-G | ** | ||||||||
3592428-A-G | 3724387-A-G | ** | ||||||||
3603423-C-A | 3735382-C-A | ** | ||||||||
3605831-C-A | 3737790-C-A | ** | ||||||||
3622094-T-A | 3754053-T-A | ** | ||||||||
3622279-C-A | 3754238-C-A | ** | ||||||||
3650665-G-T | 3782624-G-T | ** | ||||||||
3697099-G-T | 3829058-G-T | ** | ||||||||
3704181-C-A | 3836140-C-A | ** | ||||||||
3804368-C-A | 3936327-C-A | ** | ||||||||
3834478-A-G | 3966437-A-G | ** | ||||||||
3841818-C-A | 3973777-C-A | ** | ||||||||
3847551-T-C | 3979510-T-C | ** | ||||||||
3890230-C-A | 4022189-C-A | ** | ||||||||
3923476-C-A | 4055435-C-A | ** | ||||||||
3990345-C-A | 4122304-C-A | ** | ||||||||
3992349-G-A | 4124308-G-A | ** | ||||||||
4062532-C-A | 4194491-C-A | ** | ||||||||
4100566-C-A | 4232525-C-A | ** | ||||||||
4108282-T-C | 4240241-T-C | ** | ||||||||
4123496-C-A | 4255455-C-A | ** | ||||||||
4144266-G-C | 4276225-G-C | ** | ||||||||
4217897-G-A | 4349856-G-A | ** | ||||||||
4217980-C-A | 4349939-C-A | ** | ||||||||
4222624-C-A | 4354583-C-A | ** | ||||||||
4240372-C-A | 4372331-C-A | ** | ||||||||
4271885-C-A | 4403844-C-A | ** | ||||||||
4281971-C-A | 4413930-C-A | ** | ||||||||
4306168-G-C | 4438127-G-C | ** | ||||||||
4388056-C-A | 4520015-C-A | ** | ||||||||
4392972-T-C | 4524931-T-C | ** | ||||||||
4408895-TA-T | 4540854-TA-T | 8×A | ** | |||||||
4443357-C-A | 4575316-C-A | ** | ||||||||
4497700-C-A | 4629659-C-A | ** | ||||||||
4538573-C-A | 4670532-C-A | ** | ||||||||
4540918-A-C | 4672877-A-C | ** | ||||||||
4541085-C-A | 4673044-C-A | ** | ||||||||
4568474-C-T | 4700433-C-T | ** | ||||||||
4582411-T-C | 4714370-T-C | ** | ||||||||
4694977-C-A | 4826936-C-A | ** | ||||||||
4727789-GT-G | 4859748-GT-G | ** | ||||||||
4754119-C-A | 4886078-C-A | ** | ||||||||
4779551-C-A | 4911510-C-A | ** | ||||||||
4896078-C-A | 5028037-C-A | FT57089 | ** | |||||||
4951595-T-C | 5083554-T-C | ** | ||||||||
4961669-T-G | 5093628-T-G | ** | ||||||||
4961683-G-T | 5093642-G-T | ** | ||||||||
4968102-C-A | 5100061-C-A | ** | ||||||||
4968103-A-G | 5100062-A-G | ** | ||||||||
4991644-C-A | 5123603-C-A | ** | ||||||||
5010333-T-C | 5142292-T-C | ** | ||||||||
5073853-C-A | 5205812-C-A | ** | ||||||||
5099479-C-G | 5231438-C-G | ** | ||||||||
5100904-C-A | 5232863-C-A | ** | ||||||||
5110242-C-A | 5242201-C-A | ** | ||||||||
5171513-C-A | 5303472-C-A | ** | ||||||||
5208130-C-A | 5340089-C-A | ** | ||||||||
5261492-G-T | 5393451-G-T | ** | ||||||||
5421501-C-A | 5553460-C-A | ** | ||||||||
5470835-C-A | 5602794-C-A | ** | ||||||||
5537373-C-A | 5669332-C-A | ** | ||||||||
5602760-T-C | 5734719-T-C | ** | ||||||||
5609417-A-G | 5741376-A-G | FT324484 | ** | |||||||
5711615-C-A | 5843574-C-A | ** | ||||||||
5743174-C-G | 5875133-C-G | ** | ||||||||
5813774-G-T | 5945733-G-T | ** | ||||||||
5815587-T-C | 5947546-T-C | ** | ||||||||
5829749-T-C | 5961708-T-C | ** | ||||||||
5830378-C-A | 5962337-C-A | ** | ||||||||
5842700-A-G | 5974659-A-G | ** | ||||||||
5854801-G-A | 5986760-G-A | ** | ||||||||
5864779-T-C | 5996738-T-C | ** | ||||||||
6028268-C-A | 6160227-C-A | ** | ||||||||
6074608-T-C | 6206567-T-C | ** | ||||||||
6356183-C-A | 6488142-C-A | ** | ||||||||
6474651-A-G | 6606610-A-G | ** | ||||||||
6509366-C-CT | 6641325-C-CT | 8×T | ** | |||||||
6580585-C-A | 6712544-C-A | ** | ||||||||
6666082-C-A | 6798041-C-A | ** | ||||||||
6666169-T-C | 6798128-T-C | ** | ||||||||
6691331-G-T | 6823290-G-T | ** | ||||||||
6712729-G-T | 6844688-G-T | ** | ||||||||
6720639-C-A | 6852598-C-A | ** | ||||||||
6751072-G-T | 6883031-G-T | ** | ||||||||
6948456-C-A | 7080415-C-A | ** | ||||||||
6999426-C-G | 7131385-C-G | ** | ||||||||
7039541-C-A | 7171500-C-A | ** | ||||||||
7043372-C-T | 7175331-C-T | ** | ||||||||
7044224-C-A | 7176183-C-A | ** | ||||||||
7044959-G-T | 7176918-G-T | ** | ||||||||
7045523-C-A | 7177482-C-A | ** | ||||||||
7060734-A-G | 7192693-A-G | ** | ||||||||
7110727-C-A | 7242686-C-A | ** | ||||||||
7231191-T-C | 7363150-T-C | ** | ||||||||
7277198-G-C | 7409157-G-C | ** | ||||||||
7277298-C-A | 7409257-C-A | ** | ||||||||
7299131-C-A | 7431090-C-A | ** | ||||||||
7301572-C-A | 7433531-C-A | ** | ||||||||
7373181-C-G | 7505140-C-G | ** | ||||||||
7385910-T-G | 7517869-T-G | ** | ||||||||
7418541-G-T | 7550500-G-T | ** | ||||||||
7437421-T-C | 7569380-T-C | ** | ||||||||
7443939-C-A | 7575898-C-A | ** | ||||||||
7629918-C-A | 7761877-C-A | ** | ||||||||
7643558-G-T | 7775517-G-T | FT462906 | ** | |||||||
7757195-A-G | 7889154-A-G | ** | ||||||||
7829551-C-A | 7961510-C-A | ** | ||||||||
8077234-G-T | 8209193-G-T | ** | ||||||||
8080231-C-A | 8212190-C-A | ** | ||||||||
8159013-A-G | 8290972-A-G | ** | ||||||||
8159371-C-A | 8291330-C-A | ** | ||||||||
8326122-A-G | 8458081-A-G | ** | ||||||||
8736551-G-A | 8868510-G-A | ** | ||||||||
8811233-C-A | 8943192-C-A | ** | ||||||||
8811345-T-C | 8943304-T-C | ** | ||||||||
8854280-C-A | 8986239-C-A | ** | ||||||||
9111547-G-T | ** | |||||||||
9147002-G-T | 9309393-G-T | ** | ||||||||
9221751-G-GTATA | 9384142-G-GTATA | ** | ||||||||
9231548-G-T | 9393939-G-T | ** | ||||||||
9702795-G-T | 9865186-G-T | IR3_Prx | ** | |||||||
9750126-G-GT | 9912517-G-GT | ** | ||||||||
9885348-C-A | 10047739-C-A | ** | ||||||||
9990940-G-A | 10153331-G-A | ** | ||||||||
9991108-G-A | 10153499-G-A | ** | ||||||||
9996294-A-G | 10158685-A-G | ** | ||||||||
10001569-G-A | 10163960-G-A | ** | ||||||||
10075837-G-A | 10238228-G-A | FT72815 | ** | |||||||
10651847-C-A | ** | |||||||||
10655029-C-A | ** | |||||||||
10657987-C-A | ** | |||||||||
10658112-C-A | ** | |||||||||
10660111-C-T | ** | |||||||||
10661564-C-A | ** | |||||||||
10663363-T-C | ** | |||||||||
10669381-T-CAACAC | ** | |||||||||
10669388-C-G | ** | |||||||||
10678302-A-T | ** | |||||||||
10678661-C-A | ** | |||||||||
10686784-A-G | ** | |||||||||
10687083-C-A | ** | |||||||||
10688447-C-A | ** | |||||||||
10749294-C-A | ** | |||||||||
10753743-C-A | ** | |||||||||
10753870-A-G | ** | |||||||||
10758484-T-A | ** | |||||||||
10758503-C-A | ** | |||||||||
10763631-C-A | ** | |||||||||
10769367-T-C | ** | |||||||||
10782718-C-A | ** | |||||||||
10795107-C-A | ** | |||||||||
10805847-T-C | ** | |||||||||
10820014-C-A | ** | |||||||||
10820453-C-A | ** | |||||||||
10820626-C-A | ** | |||||||||
10829052-C-A | ** | |||||||||
10833342-C-A | ** | |||||||||
10834113-C-A | ** | |||||||||
10834479-T-C | ** | |||||||||
10835450-G-T | ** | |||||||||
10838069-C-A | ** | |||||||||
10843320-C-A | ** | |||||||||
10844503-C-G | ** | |||||||||
10861209-TC-T | ** | |||||||||
10861233-T-C | ** | |||||||||
10861241-C-A | ** | |||||||||
10861244-C-T | ** | |||||||||
10866539-C-A | ** | |||||||||
10867637-C-A | ** | |||||||||
10868554-C-T | ** | |||||||||
10868558-A-C | ** | |||||||||
10884636-G-C | ** | |||||||||
10892009-T-C | ** | |||||||||
10892562-C-CTACTTGAGTGGATT | ** | |||||||||
10898970-C-A | ** | |||||||||
10902505-GT-A | ** | |||||||||
10902543-T-C | ** | |||||||||
10918635-C-A | ** | |||||||||
10932324-C-A | ** | |||||||||
10939616-C-T | ** | |||||||||
10940614-C-A | ** | |||||||||
10948303-T-C | ** | |||||||||
10949658-C-A | ** | |||||||||
10951963-G-T | ** | |||||||||
10954161-C-A | ** | |||||||||
10965373-C-A | ** | |||||||||
10969295-C-G | ** | |||||||||
10971315-C-T | ** | |||||||||
10984150-C-A | FTB9172 | ** | ||||||||
10985316-C-T | ** | |||||||||
10985334-G-C | ** | |||||||||
10985354-C-A | ** | |||||||||
10991335-A-T | ** | |||||||||
11000206-C-A | ** | |||||||||
11006513-C-A | ** | |||||||||
11006595-A-G | ** | |||||||||
11007026-C-T | ** | |||||||||
11010663-C-A | ** | |||||||||
11011058-C-A | ** | |||||||||
11011201-C-A | ** | |||||||||
11018216-T-G | ** | |||||||||
11018234-ACTCCAC-A | ** | |||||||||
11018282-C-G | ** | |||||||||
11018292-C-T | ** | |||||||||
11020675-C-A | ** | |||||||||
11025569-C-A | ** | |||||||||
11025877-C-A | ** | |||||||||
11033888-ATCCAT-A | ** | |||||||||
13256353-G-A | 11100677-G-A | ** | ||||||||
13306303-C-A | 11150627-C-A | ** | ||||||||
13353667-C-A | 11197991-C-A | ** | ||||||||
13360855-C-A | 11205179-C-A | ** | ||||||||
13525973-T-G | 11370297-T-G | ** | ||||||||
13567029-C-A | 11411353-C-A | ** | ||||||||
13576442-C-T | 11420766-C-T | ** | ||||||||
13591694-C-T | 11436018-C-T | ** | ||||||||
13594399-C-A | 11438723-C-A | ** | ||||||||
13692766-A-G | 11537090-A-G | DYZ17 | ** | |||||||
11654368-A-T | DYZ17 | ** | ||||||||
11655166-C-G | DYZ17 | ** | ||||||||
11656666-G-A | DYZ17 | ** | ||||||||
11657413-G-T | DYZ17 | ** | ||||||||
11658577-C-A | DYZ17 | ** | ||||||||
11670426-C-A | DYZ17 | ** | ||||||||
13804023-A-G | 11683317-A-G | DYZ17 | ** | |||||||
13856985-C-A | 11736279-C-A | DYZ17 | ** | |||||||
13858844-G-T | 11738138-G-T | DYZ17 | ** | |||||||
13871995-C-A | 11751289-C-A | ** | ||||||||
13891589-C-A | 11770883-C-A | ** | ||||||||
13896073-C-A | 11775367-C-A | ** | ||||||||
13927905-C-A | 11807199-C-A | FGC74188 | ** | |||||||
13935976-C-A | 11815270-C-A | ** | ||||||||
13938780-C-A | 11818074-C-A | ** | ||||||||
13940388-A-C | 11819682-A-C | ** | ||||||||
14007459-C-A | 11886753-C-A | ** | ||||||||
14093460-TCACCCC-T | 11972754-TCACCCC-T | ** | ||||||||
14178157-C-A | 12057451-C-A | ** | ||||||||
14232043-G-A | 12111337-G-A | ** | ||||||||
14241782-AT-A | 12121076-AT-A | ** | ||||||||
14278521-A-C | 12157815-A-C | ** | ||||||||
14344083-C-A | 12223378-C-A | ** | ||||||||
14349201-C-A | 12228496-C-A | ** | ||||||||
14361638-A-G | 12240933-A-G | ** | ||||||||
14385599-G-A | 12264895-G-A | ** | ||||||||
14386763-G-T | 12266059-G-T | ** | ||||||||
14463327-C-A | 12342600-C-A | ** | ||||||||
14486044-C-A | 12365313-C-A | ** | ||||||||
14486049-C-A | 12365318-C-A | ** | ||||||||
12373893-A-G | ** | |||||||||
12373955-C-A | ** | |||||||||
14505989-C-A | 12394194-C-A | ** | ||||||||
14539692-C-G | 12427893-C-G | ** | ||||||||
14560764-G-T | 12448965-G-T | ** | ||||||||
14571189-T-C | 12459389-T-C | ** | ||||||||
14661408-C-A | 12549473-C-A | ** | ||||||||
14680053-C-A | 12568119-C-A | ** | ||||||||
14703626-T-A | 12591692-T-A | ** | ||||||||
14717633-C-T | 12605701-C-T | ** | ||||||||
14766638-T-C | 12654707-T-C | ** | ||||||||
14779522-G-C | 12667592-G-C | ** | ||||||||
15045351-C-G | 12933441-C-G | ** | ||||||||
15066024-T-G | 12954116-T-G | ** | ||||||||
15114095-C-A | 13002182-C-A | ** | ||||||||
15115322-G-A | 13003409-G-A | ** | ||||||||
15168907-A-G | 13056993-A-G | ** | ||||||||
15186805-C-A | 13074891-C-A | ** | ||||||||
15239089-C-A | 13127175-C-A | ** | ||||||||
15369067-T-A | 13257187-T-A | ** | ||||||||
15391329-T-C | 13279449-T-C | ** | ||||||||
15394544-C-T | 13282664-C-T | ** | ||||||||
15452226-C-A | 13340346-C-A | ** | ||||||||
15606592-C-A | 13494712-C-A | ** | ||||||||
15729198-C-A | 13617318-C-A | ** | ||||||||
15791035-C-A | 13679155-C-A | ** | ||||||||
15832238-TGA-T | 13720358-TGA-T | ** | ||||||||
15916544-C-A | 13804664-C-A | ** | ||||||||
15943757-T-G | 13831877-T-G | ** | ||||||||
16001571-G-T | 13889691-G-T | ** | ||||||||
16044202-T-A | 13932322-T-A | ** | ||||||||
16045458-C-A | 13933578-C-A | ** | ||||||||
16048335-G-A | 13936455-G-A | ** | ||||||||
16079703-T-C | 13967823-T-C | ** | ||||||||
16245138-C-A | 14133258-C-A | ** | ||||||||
16421903-C-A | 14310023-C-A | ** | ||||||||
16426605-C-A | 14314725-C-A | ** | ||||||||
16462427-C-A | 14350547-C-A | ** | ||||||||
16490094-C-A | 14378214-C-A | ** | ||||||||
16526601-G-T | 14414721-G-T | ** | ||||||||
16623158-C-T | 14511278-C-T | ** | ||||||||
16826973-T-A | 14715093-T-A | ** | ||||||||
16827064-T-A | 14715184-T-A | ** | ||||||||
16968134-G-A | 14856254-G-A | ** | ||||||||
17066206-C-A | 14954326-C-A | ** | ||||||||
17085888-T-C | 14974008-T-C | ** | ||||||||
17379206-G-T | 15267326-G-T | ** | ||||||||
17465033-G-T | 15353153-G-T | ** | ||||||||
17466809-C-A | 15354929-C-A | ** | ||||||||
17511647-CA-C | 15399767-CA-C | ** | ||||||||
17545568-C-T | 15433688-C-T | ** | ||||||||
17567356-G-A | 15455476-G-A | ** | ||||||||
17795605-A-G | 15683725-A-G | ** | ||||||||
17850084-C-A | 15738204-C-A | ** | ||||||||
17926590-A-G | 15814710-A-G | ** | ||||||||
17968870-G-T | 15856990-G-T | ** | ||||||||
17998675-TGAAAAGACCAAATCTATG-T | 15886795-TGAAAAGACCAAATCTATG-T | P7_Gap | ** | |||||||
18086947-C-G | 15975067-C-G | ** | ||||||||
18186610-G-T | 16074730-G-T | ** | ||||||||
18187657-G-T | 16075777-G-T | ** | ||||||||
18226731-A-C | 16114851-A-C | ** | ||||||||
18288506-T-C | 16176626-T-C | P6_Prx | ** | |||||||
18622067-C-A | 16510187-C-A | ** | ||||||||
18928557-T-G | 16816677-T-G | ** | ||||||||
19073602-A-C | 16961722-A-C | ** | ||||||||
19129389-C-A | 17017509-C-A | ** | ||||||||
19303578-G-T | 17191698-G-T | ** | ||||||||
19410075-C-T | 17298195-C-T | ** | ||||||||
19537834-C-A | 17425954-C-A | FT371044 | ** | |||||||
19544494-C-T | 17432614-C-T | ** | ||||||||
19544523-C-A | 17432643-C-A | ** | ||||||||
19557319-C-A | 17445439-C-A | ** | ||||||||
20330272-C-T | 18168386-C-T | P5_Dst | ** | |||||||
20348652-T-TC | 18186766-T-TC | P5_Dst | ** | |||||||
20570271-TG-T | 18408385-TG-T | P5_Dst | ** | |||||||
20661844-C-CG | 18499958-C-CG | P4_Prx | ** | |||||||
20700662-A-C | 18538776-A-C | P4_Prx | ** | |||||||
20700676-A-C | 18538790-A-C | P4_Prx | ** | |||||||
20700705-A-AG | 18538819-A-AG | P4_Prx | ** | |||||||
21029187-T-A | 18867301-T-A | P4_Dst | ** | |||||||
21262756-G-T | 19100870-G-T | ** | ||||||||
21275394-G-T | 19113508-G-T | ** | ||||||||
21418866-C-A | 19256980-C-A | ** | ||||||||
21544752-C-A | 19382866-C-A | ** | ||||||||
21555238-C-CTTT | 19393352-C-CTTT | 15×T | ** | |||||||
21584624-C-T | 19422738-C-T | ** | ||||||||
21634971-A-G | 19473085-A-G | ** | ||||||||
21698233-C-A | 19536347-C-A | ** | ||||||||
21703145-C-A | 19541259-C-A | ** | ||||||||
21858211-G-T | 19696325-G-T | ** | ||||||||
21974772-A-G | 19812886-A-G | ** | ||||||||
21974773-A-G | 19812887-A-G | ** | ||||||||
21991332-A-G | 19829446-A-G | ** | ||||||||
22080563-C-A | 19918677-C-A | ** | ||||||||
22128667-T-C | 19966781-T-C | ** | ||||||||
22193091-C-A | 20031205-C-A | ** | ||||||||
22303622-T-C | 20141736-T-C | DYZ19 | ** | |||||||
22346866-T-A | 20184980-T-A | DYZ19 | ** | |||||||
22488997-C-A | 20327111-C-A | DYZ19 | ** | |||||||
22536718-A-G | 20374832-A-G | ** | ||||||||
22615143-G-T | 20453257-G-T | ** | ||||||||
22766021-C-A | 20604135-C-A | ** | ||||||||
22874071-G-T | 20712185-G-T | ** | ||||||||
22876547-C-A | 20714661-C-A | ** | ||||||||
23204659-A-G | 21042773-A-G | ** | ||||||||
23288493-T-C | 21126607-T-C | ** | ||||||||
23288596-T-C | 21126710-T-C | ** | ||||||||
23345917-C-A | 21184031-C-A | ** | ||||||||
23439905-GTTTT-G | 21278019-GTTTT-G | 15×T | ** | |||||||
23449061-T-G | 21287175-T-G | ** | ||||||||
23788260-C-A | 21626374-C-A | ** | ||||||||
23825064-A-ATTT | 21663178-A-ATTT | 25×T | ** | |||||||
24013850-T-TAA | 21867703-T-TAA | ** | ||||||||
24071330-C-A | 21925183-C-A | P3_b1 | ** | |||||||
24283326-A-T | 22137179-A-T | P3_t1 | ** | |||||||
24458798-T-C | 22312651-T-C | ** | ||||||||
24729566-C-T | 22583419-C-T | P3_b2 | ** | |||||||
25955982-G-GTATATATA | 23809835-G-GTATATATA | P1_Y1 | ** | |||||||
26162021-T-TTC | 24015874-T-TTC | P1_Y1 | ** | |||||||
26199544-G-A | 24053397-G-A | P1_Y1 | ** | |||||||
26206278-G-T | 24060131-G-T | P1_Y1 | ** | |||||||
26686600-C-A | 24540453-C-A | P1_g2 | ** | |||||||
26834836-GA-G | 24688689-GA-G | P1_g2 | ** | |||||||
27829080-C-A | 25682933-C-A | P1_Y2 | ** | |||||||
27862637-A-G | 25716490-A-G | P1_Y2 | ** | |||||||
27870216-C-A | 25724069-C-A | P1_Y2 | ** | |||||||
28482432-G-T | 26336285-G-T | ** | ||||||||
28483738-C-A | 26337591-C-A | ** | ||||||||
28496248-C-A | 26350101-C-A | ** | ||||||||
28510173-C-A | 26364026-C-A | ** | ||||||||
28544362-C-A | 26398215-C-A | ** | ||||||||
28555613-C-A | 26409466-C-A | ** | ||||||||
28558797-T-G | 26412650-T-G | ** | ||||||||
28601717-A-T | 26455570-A-T | ** | ||||||||
28622001-A-G | 26475854-A-G | ** | ||||||||
28632721-C-A | 26486574-C-A | ** | ||||||||
28666895-C-A | 26520748-C-A | ** | ||||||||
28703436-C-A | 26557289-C-A | ** | ||||||||
28720192-T-C | 26574045-T-C | ** | ||||||||
28754385-C-A | 26608238-C-A | ** | ||||||||
56825613-G-T | ** | |||||||||
58981435-C-G | 56835288-C-G | ** | ||||||||
56840759-T-G | ** | |||||||||
56842131-T-C | ** | |||||||||
56842176-T-C | ** | |||||||||
56850273-G-T | ** | |||||||||
56851223-C-T | ** | |||||||||
59027478-A-C | 56881331-A-C | ** | ||||||||
28045-G-T | ** | |||||||||
28812453-G-C | 26666306-G-C | ** | ||||||||
3203652-T-G | 3335611-T-G | ** | ||||||||
6174530-T-G | 6306489-T-G | IR3_Dst | ** | |||||||
10053188-GT-G | 10215579-GT-G | ** | ||||||||
15147610-A-T | 13035697-A-T | ** | ||||||||
15480111-A-ATTT | 13368231-A-ATTT | 21×T | ** | |||||||
19686246-G-T | 17574366-G-T | P5_Prx | ** | |||||||
19753967-T-G | 17642087-T-G | P5_Prx | ** | |||||||
19846889-T-C | 17735009-T-C | P5_Prx | ** | |||||||
20436045-T-TC | 18274159-T-TC | P5_Dst | ** | |||||||
20689838-TGA-T | 18527952-TGA-T | P4_Prx | ** | |||||||
23085469-T-C | 20923583-T-C | ** | ||||||||
25520323-A-T | 23374176-A-T | P1_gr1 | ** | |||||||
25567584-C-A | 23421437-C-A | P1_gr1 | ** | |||||||
25596255-T-A | 23450108-T-A | P1_gr1 | ** | |||||||
25617306-C-A | 23471159-C-A | P1_gr1 | ** | |||||||
26398389-G-T | 24252242-G-T | P1_Y1 | ** | |||||||
9992953-T-C | 10155344-T-C | *** | ||||||||
13866339-GTAATC-G,GGAATC | 11745633-GTAATC-G,GGAATC | DYZ17 | *** | |||||||
19231306-G-T | 17119426-G-T | *** | ||||||||
13140528-CA-C | 10630014-CA-C | *** | ||||||||
25023934-C-T | 22877787-C-T | g1 | *** | |||||||
26553052-G-A | 24406905-G-A | P1_g2 | *** | |||||||
24417006-AAAAGAAAGAAAG-A,AAAAG | 22270859-AAAAGAAAGAAAG-A,AAAAG | 18×AAAG | *** | |||||||
15964642-CTT-C,CT | 13852762-CTT-C,CT | 14×T | *** | |||||||
13855815-C-A | 11735109-C-A | DYZ17 | *** | |||||||
3279801-G-T | 3411760-G-T | *** | ||||||||
7188502-C-A | 7320461-C-A | *** | ||||||||
8556344-A-G | 8688303-A-G | *** | ||||||||
9063859-CTTTT-C,CTTT | 9226250-CTTTT-C,CTTT | 16×T | *** | |||||||
11030123-C-A | *** | |||||||||
13329495-A-T | 11173819-A-T | *** | ||||||||
13466162-C-A | 11310486-C-A | *** | ||||||||
13468648-C-T | 11312972-C-T | *** | ||||||||
11663425-C-T | FT450784 | DYZ17 | *** | |||||||
14960476-G-A | 12848551-G-A | *** | ||||||||
23006841-C-A | 20844955-C-A | *** | ||||||||
27039050-C-A | 24892903-C-A | P1_r4 | *** | |||||||
28611766-C-T | 26465619-C-T | *** | ||||||||
7299201-C-A | 7431160-C-A | *** | ||||||||
13475608-G-A | 11319932-G-A | *** | ||||||||
8634402-AC-A,AA | 8766361-AC-A,AA | *** | ||||||||
10061961-G-T | 10224352-G-T | *** | ||||||||
14682215-C-A | 12570281-C-A | *** | ||||||||
16999865-C-A | 14887985-C-A | *** | ||||||||
18860575-C-T | 16748695-C-T | *** | ||||||||
21124656-T-C | 18962770-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.