Pecknold

FGC: ZWT7E, FTDNA: 262388

Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z46375 > DF106 > DF104 > DF105 > FGC4108/S588 > S603 > FGC16732

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
ZWT7E
5235100-C-T 5367059-C-T FGC16728 +
19188593-G-C 17076713-G-C FGC16742 YY+
21406508-G-T 19244622-G-T FGC16743 YY+
21832167-C-T 19670281-C-T FGC16744 Y+
8809558-G-T 8941517-G-T FGC16734 YY+
2731859-T-C 2863818-T-C FGC16727 YY+
8768238-C-G 8900197-C-G FGC16733 YY+
14284526-C-A 12163820-C-A FGC16736 Y+
9039408-A-G 9201799-A-G FGC16735 Y+
28638144-A-G 26491997-A-G FGC16746 +
15519162-A-G 13407282-A-G FGC16738 YY+
15888315-A-G 13776435-A-G FGC16739 Y+
28592053-G-T 26445906-G-T FGC16745 +
5864550-C-A 5996509-C-A FGC16731 *
5386142-C-T 5518101-C-T FGC16729 *
5661801-A-G 5793760-A-G FGC16730 *
13411604-T-G 11255928-T-G **
7270276-C-CTTTTTT 7402235-C-CTTTTTT 25×T**
23316016-C-CTTTATTTA 21154130-C-CTTTATTTA 11×TTTA**
13423560-C-T 11267884-C-T **
13432695-G-C 11277019-G-C **
58845839-CATTCGAGTCCATTCG-C 56745015-TTCGAATGGACTCGAA-T **
25588170-G-T 23442023-G-T P1_gr1 ***
25998043-T-A 23851896-T-A P1_Y1 ***
25907837-A-T 23761690-A-T P1_Y1 ***
25865222-A-G 23719075-A-G P1_Y1 ***
24262390-A-T 22116243-A-T P3_b1 ***
24262391-A-T 22116244-A-T P3_b1 ***
25865186-G-A 23719039-G-A P1_Y1 ***
25568755-C-T 23422608-C-T P1_gr1 ***
24262424-C-T 22116277-C-T P3_b1 ***
24329090-A-C 22182943-A-C P3_t1 ***
24273722-G-A 22127575-G-A P3_b1 ***
24262393-A-T 22116246-A-T P3_b1 ***
24262394-C-T 22116247-C-T P3_b1 ***
24262396-C-T 22116249-C-T P3_b1 ***
24262419-A-T 22116272-A-T P3_b1 ***
24273720-G-A 22127573-G-A P3_b1 ***
25998071-G-T 23851924-G-T P1_Y1 ***
22241462-A-C 20079576-A-C DYZ19 ***
26040895-A-C 23894748-A-C P1_Y1 ***
27201163-G-T 25055016-G-T P1_g3 ***
27462488-T-C 25316341-T-C P1_Y2 15×AC***
27416054-G-T 25269907-G-T P1_g3 ***
27416044-T-A 25269897-T-A P1_g3 ***
27340264-T-A 25194117-T-A P1_g3 ***
27340262-T-A 25194115-T-A P1_g3 ***
27306817-G-T 25160670-G-T P1_g3 ***
27287129-G-A 25140982-G-A P1_g3 ***
27201230-C-T 25055083-C-T P1_g3 ***
27201224-A-T 25055077-A-T P1_g3 ***
27201164-G-T 25055017-G-T P1_g3 ***
27156634-T-A 25010487-T-A P1_g3 ***
26040897-A-T 23894750-A-T P1_Y1 ***
27156616-A-T 25010469-A-T P1_g3 ***
27078005-G-C 24931858-G-C P1_r4 ***
26846899-G-T 24700752-G-T P1_r3 ***
26846898-T-C 24700751-T-C P1_r3 ***
26846897-A-T 24700750-A-T P1_r3 ***
26846895-A-G 24700748-A-G P1_r3 ***
26699430-C-T 24553283-C-T P1_g2 ***
26372700-A-G 24226553-A-G P1_Y1 ***
26248388-T-G 24102241-T-G P1_Y1 ***
26248380-T-C 24102233-T-C P1_Y1 ***
26637934-T-A 24491787-T-A P1_g2 ***
22495932-G-T 20334046-G-T DYZ19 ***
24262388-G-T 22116241-G-T P3_b1 ***
22332938-T-C 20171052-T-C DYZ19 ***
22338021-C-T 20176135-C-T DYZ19 ***
22338012-T-G 20176126-T-G DYZ19 ***
22337350-G-A 20175464-G-A DYZ19 ***
22337298-G-A 20175412-G-A DYZ19 ***
22337295-A-C 20175409-A-C DYZ19 ***
22337164-A-G 20175278-A-G DYZ19 ***
22337159-A-C 20175273-A-C DYZ19 ***
22335466-T-A 20173580-T-A DYZ19 ***
22335442-G-A 20173556-G-A DYZ19 ***
22335440-A-C 20173554-A-C DYZ19 ***
22335439-A-T 20173553-A-T DYZ19 ***
22324938-A-G 20163052-A-G DYZ19 ***
22355523-T-G 20193637-T-G DYZ19 ***
22324937-A-C 20163051-A-C DYZ19 ***
22324936-T-C 20163050-T-C DYZ19 ***
22322853-G-A 20160967-G-A DYZ19 ***
22308422-A-G 20146536-A-G DYZ19 ***
22307195-G-C 20145309-G-C DYZ19 ***
22307191-A-C 20145305-A-C DYZ19 ***
22292440-A-C 20130554-A-C DYZ19 ***
22292261-T-G 20130375-T-G DYZ19 ***
22248475-C-T 20086589-C-T DYZ19 ***
22232011-G-T 20070125-G-T DYZ19 ***
22231996-A-T 20070110-A-T DYZ19 ***
22354237-C-A 20192351-C-A DYZ19 ***
22355531-T-A 20193645-T-A DYZ19 ***
23110819-G-A 20948933-G-A ***
22421510-C-T 20259624-C-T DYZ19 ***
22996977-T-C 20835091-T-C ***
22503805-G-A 20341919-G-A DYZ19 ***
27480774-G-A 25334627-G-A P1_Y2 ***
22491820-G-T 20329934-G-T DYZ19 ***
22491381-A-C 20329495-A-C DYZ19 ***
22491380-C-T 20329494-C-T DYZ19 ***
22488560-T-G 20326674-T-G DYZ19 ***
22488489-G-T 20326603-G-T DYZ19 ***
22479109-G-A 20317223-G-A DYZ19 ***
22421955-C-G 20260069-C-G DYZ19 ***
22421529-T-A 20259643-T-A DYZ19 ***
22421503-G-A 20259617-G-A DYZ19 ***
22355537-A-C 20193651-A-C DYZ19 ***
22421378-G-A 20259492-G-A DYZ19 ***
22421346-G-T 20259460-G-T DYZ19 ***
22420553-A-T 20258667-A-T DYZ19 ***
22365782-A-T 20203896-A-T DYZ19 ***
22365775-T-G 20203889-T-G DYZ19 ***
22365770-A-T 20203884-A-T DYZ19 ***
22365122-T-A 20203236-T-A DYZ19 ***
22364969-C-G 20203083-C-G DYZ19 ***
22359986-T-C 20198100-T-C DYZ19 ***
22355565-A-G 20193679-A-G DYZ19 ***
22355557-C-G 20193671-C-G DYZ19 ***
27480771-G-A 25334624-G-A P1_Y2 ***
27637398-C-T 25491251-C-T FGC28051 P1_Y2 ***
27480775-G-A 25334628-G-A P1_Y2 ***
13548815-T-TG 11393139-T-TG ***
22292495-GT-CA 20130609-GT-CA DYZ19 ***
22292440-AT-CC 20130554-AT-CC DYZ19 ***
22248503-CC-TA 20086617-CC-TA DYZ19 ***
16729172-G-GTT 14617292-G-GTT 22×T***
16344407-C-CTTCTTA 14232527-C-CTTCTTA ***
16344406-T-TCTTCTC 14232526-T-TCTTCTC ***
16344404-C-CTTCTTG 14232524-C-CTTCTTG ***
16336897-G-GGTTTTTTTT 14225017-G-GGTTTTTTTT 23×T***
16242402-C-CTTTTTTT 14130522-C-CTTTTTTT 18×T***
15904149-C-CAAA 13792269-C-CAAA 20×A***
15171226-C-CTTT 13059312-C-CTTT 19×T***
13488969-GGCC-AGCG 11333293-GGCC-AGCG ***
22328421-TATAA-GATCT 20166535-TATAA-GATCT DYZ19 ***
13488952-TC-CA 11333276-TC-CA ***
13483742-CTGT-ATGA 11328066-CTGT-ATGA ***
13480156-CCCG-GCCA 11324480-CCCG-GCCA ***
13476910-TTCAGCA-CTCACTG 11321234-TTCAGCA-CTCACTG ***
13472064-TGG-CGA 11316388-TGG-CGA ***
13468648-C-CA 11312972-C-CA ***
13467564-CT-AC 11311888-CT-AC ***
13467545-CAGA-TAGG 11311869-CAGA-TAGG ***
13464507-TTCT-GTCC 11308831-TTCT-GTCC ***
13140069-CACTCGAGTGCGTGTGATTCCATTAAATCAGA-C 10629555-CACTCGAGTGCGTGTGATTCCATTAAATCAGA-C ***
10090755-AAAG-CAAA 10253146-AAAG-CAAA ***
10037525-GTA-CTG 10199916-GTA-CTG ***
22292504-CCAGAGTT-TTAGATTG 20130618-CCAGAGTT-TTAGATTG DYZ19 ***
22337792-CAGT-TAGG 20175906-CAGT-TAGG DYZ19 ***
9342743-CCC-GGA 9505134-CCC-GGA ***
23315713-CTTTTTT-C 21153827-CTTTTTT-C 20×T***
58843642-GC-TT 56747228-GC-AA ***
58840387-TTTC-ATTT 56750481-GAAA-AAAT ***
28545880-CAAAAAAAA-C 26399733-CAAAAAAAA-C 20×A***
27971726-C-CAAAAAA 25825579-C-CAAAAAA P1_Y2 27×A***
27398510-C-CAAAAAAAAAA 25252363-C-CAAAAAAAAAA P1_g3 23×A***
27078005-GACAGACAG-CACACACAC 24931858-GACAGACAG-CACACACAC P1_r4 ***
26846894-AAAATG-CGATCT 24700747-AAAATG-CGATCT P1_r3 ***
26228689-C-CTTTTTTT 24082542-C-CTTTTTTT P1_Y1 27×T***
26060208-GACT-AA 23914061-GACT-AA P1_Y1 ***
24904674-G-GTTTTTTTTT 22758527-G-GTTTTTTTTT g1 21×T***
23364087-CAAAAAA-C 21202201-CAAAAAA-C 16×A***
22496172-TGTGG-AGTGA 20334286-TGTGG-AGTGA DYZ19 ***
22355195-CAA-AAG 20193309-CAA-AAG DYZ19 ***
22491380-CA-TC 20329494-CA-TC DYZ19 ***
22491377-T-TA 20329491-T-TA DYZ19 ***
22482591-ATTG-CTTT 20320705-ATTG-CTTT DYZ19 ***
22479046-CTG-GTC 20317160-CTG-GTC DYZ19 ***
22479024-TTT-AAG 20317138-TTT-AAG DYZ19 ***
22457188-TTTCG-GTTCA 20295302-TTTCG-GTTCA DYZ19 ***
22365758-GTTTTTTACATCA-ATTTGTTCCTTCT 20203872-GTTTTTTACATCA-ATTTGTTCCTTCT DYZ19 ***
22364977-TC-GG 20203091-TC-GG DYZ19 ***
22364943-CATCTTTAATGAAGC-TTTCAAGAATTAAGT 20203057-CATCTTTAATGAAGC-TTTCAAGAATTAAGT DYZ19 ***
22360059-GG-TT 20198173-GG-TT DYZ19 ***
22355574-CAGACC-AAGAAT 20193688-CAGACC-AAGAAT DYZ19 ***
22355517-GA-CC 20193631-GA-CC DYZ19 ***
9429480-T-TTAAAAA 9591871-T-TTAAAAA 18×A***
9330717-GG-AT 9493108-GG-AT ***
27480794-G-A 25334647-G-A P1_Y2 ***
58824588-C-T 56766283-G-A ***
58840697-T-A 56750174-A-T ***
58840369-G-T 56750502-C-A ***
58840368-T-C 56750503-A-G ***
58830888-C-A 56759983-G-T ***
58830877-G-T 56759994-C-A ***
58830768-C-T 56760103-G-A ***
58830733-C-T 56760138-G-A ***
58830711-A-T 56760160-T-A ***
58830708-C-T 56760163-G-A ***
58825134-C-T 56765737-G-A ***
58824590-T-A 56766281-A-T ***
28819096-T-A 26672949-T-A ***
58843150-C-A 56747721-G-T ***
28819093-G-A 26672946-G-A ***
28819087-C-A 26672940-C-A ***
28819079-G-A 26672932-G-A ***
28385770-T-G 26239623-T-G P1_gr2 ***
27998517-G-A 25852370-G-A P1_Y2 ***
27957329-A-T 25811182-A-T P1_Y2 ***
27957310-T-A 25811163-T-A P1_Y2 ***
27821172-C-G 25675025-C-G P1_Y2 ***
27814557-G-C 25668410-G-C P1_Y2 ***
27814553-T-C 25668406-T-C P1_Y2 ***
20718339-A-T 18556453-A-T P4_Prx ***
27480795-G-A 25334648-G-A P1_Y2 ***
58840736-A-C 56750135-T-G ***
58843589-C-G 56747282-G-C ***
8776547-C-CGGATTTTTTTTT 8908506-C-CGGATTTTTTTTT 24×T***
58893150-C-G 56697721-G-C ***
8535204-G-GTTT 8667163-G-GTTT 19×T***
6456182-AAG-A 6588141-AAG-A ***
5479933-CCGGTCT-ACCATCG 5611892-CCGGTCT-ACCATCG ***
5479923-GTTTC-ATTTT 5611882-GTTTC-ATTTT ***
5225292-GTATA-G 5357251-GTATA-G 12×TA***
5211296-CTTTT-C 5343255-CTTTT-C 16×T***
3550573-TC-CA 3682532-TC-CA ***
23045488-C-AA 20883602-C-AA ***
22355142-GGT-AGG 20193256-GGT-AGG DYZ19 ***
58909188-T-C 56681683-A-G ***
58895453-A-G 56695418-T-C ***
58893294-C-T 56697577-G-A ***
58890443-T-C 56700428-A-G ***
58844313-T-A 56746558-A-T ***
58885040-C-T 56705831-G-A ***
58882191-A-T 56708680-T-A ***
58879408-C-T 56711463-G-A ***
58879392-C-T 56711479-G-A 4×CCATT***
58876490-G-C 56714381-C-G ***
58870601-A-C 56720270-T-G ***
58867426-T-A 56723445-A-T ***
58862458-C-T 56728413-G-A ***
58854287-C-A 56736584-G-T ***
58851980-A-T 56738891-T-A ***
58849078-T-A 56741793-A-T ***
58844318-T-G 56746553-A-C ***
20718342-A-T 18556456-A-T P4_Prx ***
20082227-G-T 17970347-G-T P5_Dst ***
20406919-G-A 18245033-G-A P5_Dst ***
22364988-T-A 20203102-T-A DYZ19 ***
58867486-TATTTTATTCCATGCC-T 56723365-CAAATGGCATGGAATA-C ***
22309574-AC-TT 20147688-AC-TT DYZ19 ***
58843147-C-T 56747724-G-A ***
22421460-A-T 20259574-A-T DYZ19 ***
22355178-C-G 20193292-C-G DYZ19 ***
22309590-C-T 20147704-C-T BY23146 DYZ19 ***
22292441-T-C 20130555-T-C DYZ19 ***
10052645-G-C 10215036-G-C ***
10052639-C-A 10215030-C-A ***
24643529-C-G 22497382-C-G P3_t2 ***
58874436-T-C 56716435-A-G ***
22364759-T-A 20202873-T-A DYZ19 ***
24836738-A-G 22690591-A-G P3_b2 ***
22252925-C-G 20091039-C-G DYZ19 ***
8972605-T-C 9134996-T-C ***
27617980-C-CAAAA 25471833-C-CAAAA P1_Y2 29×A***
22326778-CC-TA 20164892-CC-TA DYZ19 ***
6489371-C-CAAAAAAAAAAA 6621330-C-CAAAAAAAAAAA 25×A***
13473565-G-C 11317889-G-C ***
22503798-A-C 20341912-A-C DYZ19 ***
22337810-C-T 20175924-C-T DYZ19 ***
9930543-T-C 10092934-T-C FGC24635 ***
58867576-CAGTCC-GAGTAA 56723290-GGACTG-TTACTC ***
22480697-A-T 20318811-A-T DYZ19 ***
58874476-A-T 56716395-T-A ***
22268165-CTTAGTGG-ATTGGTGT 20106279-CTTAGTGG-ATTGGTGT DYZ19 ***
28385881-T-C 26239734-T-C P1_gr2 ***
58838987-C-T 56751884-G-A ***
22337297-T-C 20175411-T-C DYZ19 ***
13473556-T-C 11317880-T-C ***
58840405-CA-TAG 56750465-TG-CTA ***
58866420-T-A 56724451-A-T ***
22366432-G-T 20204546-G-T DYZ19 ***
13114401-G-C 10603887-G-C ***
58907246-ATTTTATCA-TTCCGATCT 56683617-TGATAAAAT-AGATCGGAA ***
58847152-G-A 56743719-C-T ***
58843145-G-A 56747726-C-T ***
28385888-G-A 26239741-G-A P1_gr2 ***
22457192-G-A 20295306-G-A DYZ19 ***
58913232-TGATG-GAATT 56677635-CATCA-AATTC ***
14429405-TTATA-T 12308680-TTA-T 15×TA***
7534392-G-GTTTT 7666351-G-GTTTT 13×T***
13467390-ACTC-TCTG 11311714-ACTC-TCTG ***
58826702-T-A 56764169-A-T ***
22364901-T-G 20203015-T-G DYZ19 ***
22364876-A-G 20202990-A-G DYZ19 ***
22308403-T-G 20146517-T-G DYZ19 ***
58843776-GTACGATTCC-ATTGGAGTCA 56747086-GGAATCGTAC-TGACTCCAAT ***
22480658-A-G 20318772-A-G DYZ19 ***
22365130-A-T 20203244-A-T DYZ19 ***
22328421-T-G 20166535-T-G DYZ19 ***
22488535-GAAGCTACC-TAAGTTGCA 20326649-GAAGCTACC-TAAGTTGCA DYZ19 ***
22257282-TACG-CATT 20095396-TACG-CATT DYZ19 ***
22234419-A-C 20072533-A-C DYZ19 ***
22248431-C-T 20086545-C-T DYZ19 ***
13467509-GAAG-TACT 11311833-GAAG-TACT ***
13467498-T-TC 11311822-T-TC ***
58909129-A-C 56681742-T-G ***
58843740-A-C 56747131-T-G ***
13740850-C-T 11585174-C-T ***
58910658-GCATTCCATTC-G 56680183-AAATGGAATGG-A 5×CATTC***
22262664-AC-A 20100778-AC-A DYZ19 ***
13486004-AA-TC 11330328-AA-TC ***
58908683-G-T 56682188-C-A ***
58874506-A-T 56716365-T-A ***
22435950-C-T 20274064-C-T DYZ19 ***
58843764-A-C 56747107-T-G ***
22357694-C-A 20195808-C-A DYZ19 ***
22366443-C-T 20204557-C-T DYZ19 ***
13475082-C-T 11319406-C-T BY85941 ***
22503151-CAGAA-AAGAG 20341265-CAGAA-AAGAG DYZ19 ***
22435744-TGA-AGC 20273858-TGA-AGC DYZ19 ***
22252645-TCTTCCTTTTGGC-CCTTAATTCTGGG 20090759-TCTTCCTTTTGGC-CCTTAATTCTGGG DYZ19 ***
22503693-T-C 20341807-T-C DYZ19 ***
22365649-G-A 20203763-G-A DYZ19 ***
22232065-G-A 20070179-G-A DYZ19 ***
4275251-T-A 4407210-T-A ***
22251518-A-C 20089632-A-C DYZ19 ***
22251519-A-T 20089633-A-T DYZ19 ***
19098471-AC-A 16986591-AC-A ***
22309358-ATT-GTG 20147472-ATT-GTG DYZ19 ***
58844025-C-CG 56746845-T-TC ***
13876452-G-A 11755746-G-A ***
58910238-T-C 56680633-A-G ***
58867556-C-T 56723315-G-A ***
58867539-T-C 56723332-A-G ***
58867514-T-A 56723357-A-T ***
22292480-C-A 20130594-C-A DYZ19 ***
22292454-G-T 20130568-G-T DYZ19 ***
19740992-C-A 17629112-C-A P5_Prx 24×A***
13716281-T-A 11560605-T-A ***
22480925-ACTGG-TGTGA 20319039-ACTGG-TGTGA DYZ19 ***
22292227-ATCCAGT-GTCAAGA 20130341-ATCCAGT-GTCAAGA DYZ19 ***
22488496-G-T 20326610-G-T DYZ19 ***
13460356-T-G 11304680-T-G ***
22309318-GC-CG 20147432-GC-CG DYZ19 ***
9951397-CAGACT-TAGACC 10113788-CAGACT-TAGACC ***
22495918-G-C 20334032-G-C DYZ19 ***
22480676-C-G 20318790-C-G DYZ19 ***
22241386-C-T 20079500-C-T DYZ19 ***
23832825-TTT-C 21670939-TTT-C ***
22353018-TG-T 20191132-TG-T DYZ19 ***
22352967-GT-TA 20191081-GT-TA DYZ19 ***
22309544-GTGGT-CTGGG 20147658-GTGGT-CTGGG DYZ19 ***
22353012-GG-AA 20191126-GG-AA DYZ19 ***
22353013-G-A 20191127-G-A DYZ19 ***
13414797-A-ATCTT 11259121-A-ATCTT 20×T***
13469217-T-C 11313541-T-C ***
22234430-A-G 20072544-A-G DYZ19 ***
20406917-G-T 18245031-G-T P5_Dst ***
13257293-T-A 11101617-T-A ***
13733916-C-T 11578240-C-T ***
13720082-G-T 11564406-G-T ***
13719752-C-G 11564076-C-G ***
13716293-G-A 11560617-G-A ***
13716267-G-A 11560591-G-A ***
13548821-G-C 11393145-G-C ***
13475721-G-A 11320045-G-A ***
13472113-G-T 11316437-G-T ***
13470657-T-A 11314981-T-A ***
13257297-T-A 11101621-T-A ***
13257295-T-A 11101619-T-A A3788 ***
13114430-G-C 10603916-G-C ***
14434868-C-T 12314141-C-T ***
13110566-G-C 10600052-G-C ***
13110063-T-A 10599549-T-A ***
13104557-A-T 10594043-A-T ***
10052627-T-A 10215018-T-A ***
9342745-C-A 9505136-C-A ***
9342744-C-G 9505135-C-G ***
9342743-C-G 9505134-C-G ***
9330718-G-T 9493109-G-T ***
9330717-G-A 9493108-G-A ***
9330716-T-G 9493107-T-G ***
9302447-T-C 9464838-T-C ***
14260531-A-G 12139825-A-G ***
14565610-A-C 12453810-A-C ***
9302433-C-A 9464824-C-A ***
19177240-T-C 17065360-T-C ***
20230064-G-A 18068178-G-A P5_Dst ***
20230062-G-A 18068176-G-A P5_Dst ***
20230054-G-A 18068168-G-A P5_Dst ***
20230049-G-T 18068163-G-T P5_Dst ***
20212738-A-G 18050852-A-G P5_Dst ***
20212734-T-A 18050848-T-A P5_Dst ***
20212733-C-G 18050847-C-G P5_Dst ***
22250888-T-A 20089002-T-A DYZ19 ***
19772439-C-T 17660559-C-T P5_Prx ***
19772427-T-A 17660547-T-A P5_Prx ***
19746883-T-G 17635003-T-G P5_Prx 13×TG***
19098458-G-A 16986578-G-A ***
14703999-T-A 12592065-T-A ***
18446899-T-G 16335019-T-G P6_Dst ***
18446885-T-A 16335005-T-A P6_Dst ***
18446883-T-G 16335003-T-G P6_Dst ***
18446858-T-A 16334978-T-A P6_Dst ***
18446851-T-A 16334971-T-A P6_Dst ***
18446850-T-A 16334970-T-A P6_Dst ***
18446848-G-T 16334968-G-T P6_Dst ***
15243175-C-T 13131261-C-T ***
15233773-G-T 13121859-G-T ***
14704039-A-T 12592105-A-T ***
14704017-T-A 12592083-T-A ***
9302436-C-T 9464827-C-T ***
9222832-G-T 9385223-G-T ***
58847150-C-T 56743721-G-A ***
22365677-T-G 20203791-T-G DYZ19 ***
26834861-G-A 24688714-G-A P1_g2 ***
26834849-G-A 24688702-G-A P1_g2 ***
22335452-A-C 20173566-A-C DYZ19 ***
9951061-CCA-C 10113452-CCA-C ***
14926489-G-AA 12814554-G-AA ***
22358425-T-A 20196539-T-A DYZ19 ***
22336087-T-A 20174201-T-A DYZ19 ***
58821133-TTC-T 56769732-AAG-A ***
9342740-C-A 9505131-C-A ***
9216149-G-T 9378540-G-T ***
22502657-G-T 20340771-G-T DYZ19 ***
13529010-C-A 11373334-C-A ***
22324940-A-T 20163054-A-T DYZ19 ***
22336099-T-A 20174213-T-A DYZ19 ***
7033240-C-A 7165199-C-A 15×A***
4778009-T-A 4909968-T-A ***
22421683-TCC-ACA 20259797-TCC-ACA DYZ19 ***
22292259-G-T 20130373-G-T DYZ19 ***
13480124-T-A 11324448-T-A ***
22307195-GT-CG 20145309-GT-CG DYZ19 ***
13257299-TTT-ATA 11101623-TTT-ATA ***
13535663-ATA-GTG 11379987-ATA-GTG ***
13535656-T-TACAC 11379980-T-TACAC ***
58856588-T-A 56734283-A-T ***
22241315-T-C 20079429-T-C DYZ19 ***
13470654-CGGTCT-TGGAGA 11314978-CGGTCT-TGGAGA ***
9193375-C-T 9355766-C-T ***
5088784-G-T 5220743-G-T ***
9171320-C-T 9333711-C-T ***
8178068-T-C 8310027-T-C ***
6778575-C-T 6910534-C-T ***
6292493-A-T 6424452-A-T IR3_Dst ***
6292492-G-T 6424451-G-T IR3_Dst ***
6292488-G-T 6424447-G-T IR3_Dst ***
6292472-C-T 6424431-C-T IR3_Dst ***
5479913-G-C 5611872-G-C ***
5479908-G-A 5611867-G-A FT69907 ***
5088789-G-C 5220748-G-C ***
5088785-T-C 5220744-T-C ***
5088780-G-C 5220739-G-C ***
13733917-G-T 11578241-G-T ***
5088778-A-G 5220737-A-G ***
58893713-G-T 56697158-C-A ***
22499354-A-G 20337468-A-G DYZ19 ***
9962289-G-A 10124680-G-A ***
13471261-G-A 11315585-G-A ***
13475731-T-G 11320055-T-G ***
13464095-A-G 11308419-A-G ***
10090748-G-A 10253139-G-A ***
22479084-T-A 20317198-T-A BY53231 DYZ19 ***
16784555-G-A 14672675-G-A ***
58898226-C-T 56692645-G-A ***
58843675-CGTTTCA-AATGATT 56747190-TGAAACG-AATCATT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: ZWT7E*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs97
Variant counts last updated 2019-07-19 22:51:27.

* BED data not available. Using default values.

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