Duncan

FGC-BigY: 7KEJH, FTDNA: 377578

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z2959 > Z46375 > DF106 > DF104 > DF105 > ZZ87 > DF85 > S673 > S668 > DF97 > ZZ36 > FGC19851 > BY3346 > FGC19846 > FGC19848 > FGC19840 > FGC19845

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRFGC-BigY
7KEJH
hg19:Y:23526775-T-C hg38:Y:21364889-T-C FGC36684 YY+
hg19:Y:14581400-A-G hg38:Y:12469600-A-G FGC36685 YY+
hg19:Y:5710227-CAT-C hg38:Y:5842186-CAT-C *
hg19:Y:18067401-TAGAAAGAAAGAA-T hg38:Y:15955521-TAGAAAGAAAGAA-T 15×AGAA**
hg19:Y:13861486-G-T hg38:Y:11740780-G-T DYZ17 **
hg19:Y:10073718-T-A hg38:Y:10236109-T-A **
hg19:Y:9077232-G-T hg38:Y:9239623-G-T **
hg19:Y:2763696-C-A hg38:Y:2895655-C-A **
hg19:Y:3322330-G-T hg38:Y:3454289-G-T **
hg19:Y:3841550-A-T hg38:Y:3973509-A-T **
hg19:Y:4448957-C-A hg38:Y:4580916-C-A **
hg19:Y:4889298-C-A hg38:Y:5021257-C-A **
hg19:Y:5313431-C-A hg38:Y:5445390-C-A **
hg19:Y:7035280-T-G hg38:Y:7167239-T-G **
hg19:Y:7091394-C-A hg38:Y:7223353-C-A **
hg19:Y:7114642-G-T hg38:Y:7246601-G-T **
hg19:Y:7243145-C-A hg38:Y:7375104-C-A **
hg19:Y:7724559-C-A hg38:Y:7856518-C-A **
hg19:Y:8166613-G-A hg38:Y:8298572-G-A **
hg19:Y:8279815-G-T hg38:Y:8411774-G-T **
hg19:Y:8911986-G-T hg38:Y:9043945-G-T **
hg19:Y:10043721-T-A hg38:Y:10206112-T-A **
hg19:Y:10073738-C-A hg38:Y:10236129-C-A **
hg19:Y:13457612-C-A hg38:Y:11301936-C-A **
hg19:Y:14027600-G-A hg38:Y:11906894-G-A **
hg19:Y:14198495-C-A hg38:Y:12077789-C-A **
hg19:Y:14592236-A-C hg38:Y:12480436-A-C **
hg19:Y:14693700-G-T hg38:Y:12581766-G-T **
hg19:Y:15763262-G-T hg38:Y:13651382-G-T **
hg19:Y:15858442-G-A hg38:Y:13746562-G-A FGC47266 **
hg19:Y:15894084-C-A hg38:Y:13782204-C-A **
hg19:Y:15975080-C-A hg38:Y:13863200-C-A **
hg19:Y:16352261-G-T hg38:Y:14240381-G-T **
hg19:Y:17504216-A-G hg38:Y:15392336-A-G **
hg19:Y:17753739-C-A hg38:Y:15641859-C-A **
hg19:Y:18223788-T-C hg38:Y:16111908-T-C **
hg19:Y:18539053-T-C hg38:Y:16427173-T-C **
hg19:Y:19241500-C-A hg38:Y:17129620-C-A FTA32406 **
hg19:Y:19423771-G-T hg38:Y:17311891-G-T **
hg19:Y:19460705-C-A hg38:Y:17348825-C-A **
hg19:Y:19475169-G-C hg38:Y:17363289-G-C **
hg19:Y:21115595-A-C hg38:Y:18953709-A-C **
hg19:Y:21147896-C-A hg38:Y:18986010-C-A **
hg19:Y:21737799-C-A hg38:Y:19575913-C-A **
hg19:Y:22782021-C-A hg38:Y:20620135-C-A **
hg19:Y:23142404-C-A hg38:Y:20980518-C-A **
hg19:Y:23190045-C-A hg38:Y:21028159-C-A **
hg19:Y:23198873-G-T hg38:Y:21036987-G-T **
hg19:Y:23419125-C-A hg38:Y:21257239-C-A **
hg19:Y:23789385-C-A hg38:Y:21627499-C-A **
hg19:Y:24406554-G-T hg38:Y:22260407-G-T **
hg19:Y:28724127-C-A hg38:Y:26577980-C-A **
hg19:Y:58973313-G-T hg38:Y:56827166-G-T **
hg19:Y:58994973-G-T hg38:Y:56848826-G-T **
hg19:Y:14179473-A-ATGTC hg38:Y:12058767-A-ATGTC **
hg19:Y:28499309-TG-T hg38:Y:26353162-TG-T **
hg19:Y:10023634-C-A hg38:Y:10186025-C-A ***
hg19:Y:22481429-G-C hg38:Y:20319543-G-C DYZ19 ***
hg19:Y:13473724-T-A hg38:Y:11318048-T-A ***
hg19:Y:58912787-G-C hg38:Y:56678084-C-G ***
hg19:Y:22503639-G-C hg38:Y:20341753-G-C DYZ19 ***
hg19:Y:13745911-T-G hg38:Y:11590235-T-G DYZ17 ***
hg19:Y:58876794-C-G hg38:Y:56714077-G-C ***
hg19:Y:24696109-C-CA hg38:Y:22549962-C-CA P3_b2 15×A***
hg19:Y:24859198-G-GA hg38:Y:22713051-G-GA IR1_R 12×A***
hg19:Y:27990535-G-T hg38:Y:25844388-G-T P1_Y2 ***
hg19:Y:27778164-CT-C hg38:Y:25632017-CT-C P1_Y2 12×T***
hg19:Y:22502903-G-C hg38:Y:20341017-G-C DYZ19 ***
hg19:Y:13196474-A-C hg38:Y:11040798-A-C ***
hg19:Y:19683841-CA-C hg38:Y:17571961-CA-C P5_Prx 14×A***
hg19:Y:27809437-C-A hg38:Y:25663290-C-A P1_Y2 ***
hg19:Y:19612191-AAT-A hg38:Y:17500311-AAT-A P5_Prx 9×AT***
hg19:Y:24672342-C-G hg38:Y:22526195-C-G P3_b2 ***
hg19:Y:10041393-G-C hg38:Y:10203784-G-C ***
hg19:Y:10041413-G-T hg38:Y:10203804-G-T FGC36476 ***
hg19:Y:10041399-C-T hg38:Y:10203790-C-T ***
hg19:Y:19763364-GA-G hg38:Y:17651484-GA-G P5_Prx 15×A***
hg19:Y:26001413-CT-C hg38:Y:23855266-CT-C P1_Y1 18×T***
hg19:Y:27819786-A-AT hg38:Y:25673639-A-AT P1_Y2 13×T***
hg19:Y:10023656-CTC-T hg38:Y:10186047-CTC-T ***
hg19:Y:22470656-C-G hg38:Y:20308770-C-G BY204676 DYZ19 ***
hg19:Y:22505029-A-G hg38:Y:20343143-A-G DYZ19 ***
hg19:Y:13701152-T-C hg38:Y:11545476-T-C DYZ17 ***
hg19:Y:13702766-T-C hg38:Y:11547090-T-C DYZ17 ***
hg19:Y:13461696-T-A hg38:Y:11306020-T-A ***
hg19:Y:13474008-CGTA-GGTG hg38:Y:11318332-CGTA-GGTG ***
hg19:Y:6854399-C-A hg38:Y:6986358-C-A ***
hg19:Y:19189494-C-T hg38:Y:17077614-C-T ***
hg19:Y:24794436-T-G hg38:Y:22648289-T-G P3_b2 ***
hg19:Y:25231954-T-G hg38:Y:23085807-T-G P2_r1 ***
hg19:Y:25831995-A-T hg38:Y:23685848-A-T P1_b3 ***
hg19:Y:26902230-T-A hg38:Y:24756083-T-A P1_r3 ***
hg19:Y:27016187-A-C hg38:Y:24870040-A-C P1_r4 ***
hg19:Y:28186037-A-G hg38:Y:26039890-A-G P1_b4 ***
hg19:Y:10023630-C-CT hg38:Y:10186021-C-CT ***
hg19:Y:13143673-GCAGG-ACAGT hg38:Y:10633159-GCAGG-ACAGT ***
hg19:Y:26991266-TAGT-AAGA hg38:Y:24845119-TAGT-AAGA P1_r4 ***
hg19:Y:28245714-A-AT hg38:Y:26099567-A-AT P1_b4 15×T***
hg19:Y:58977796-TCCAC-CCCAT hg38:Y:56831649-TCCAC-CCCAT ***
hg19:Y:24895675-A-C hg38:Y:22749528-A-C g1 ***
hg19:Y:18855509-C-A hg38:Y:16743629-C-A ***
hg19:Y:10041346-A-T hg38:Y:10203737-A-T ***
hg19:Y:10041351-A-G hg38:Y:10203742-A-G ***
hg19:Y:10041357-T-C hg38:Y:10203748-T-C FTA9319 ***
hg19:Y:21170326-T-G hg38:Y:19008440-T-G ***
hg19:Y:13740309-T-G hg38:Y:11584633-T-G DYZ17 ***
hg19:Y:19727375-T-C hg38:Y:17615495-T-C P5_Prx ***
hg19:Y:24043833-T-G hg38:Y:21897686-T-G ***
hg19:Y:9930165-AGCGG-CGCGT hg38:Y:10092556-AGCGG-CGCGT ***
hg19:Y:13809826-CTT-ATG hg38:Y:11689120-CTT-ATG DYZ17 ***
hg19:Y:25177324-TAC-AAA hg38:Y:23031177-TAC-AAA g1 ***
hg19:Y:27398546-GAAG-AAAA hg38:Y:25252399-GAAG-AAAA P1_g3 ***
hg19:Y:27602856-A-G hg38:Y:25456709-A-G P1_Y2 ***
hg19:Y:10086440-C-T hg38:Y:10248831-C-T ***
hg19:Y:25372091-A-T hg38:Y:23225944-A-T P2_r2 ***
hg19:Y:14937865-T-TTTCTTTTCTA hg38:Y:12825940-T-TTTCTTTTCTA ***
hg19:Y:13859632-GT-TTTC hg38:Y:11738926-GT-TTTC DYZ17 ***
hg19:Y:28117258-GTTGATC-TTTTATT hg38:Y:25971111-GTTGATC-TTTTATT P1_b4 ***
hg19:Y:9930129-C-T hg38:Y:10092520-C-T ***
hg19:Y:10042184-G-A hg38:Y:10204575-G-A ***
hg19:Y:19187499-G-T hg38:Y:17075619-G-T ***
hg19:Y:19930476-C-T hg38:Y:17818596-C-T P5_Prx 22×T***
hg19:Y:21714738-G-A hg38:Y:19552852-G-A ***
hg19:Y:25177307-A-C hg38:Y:23031160-A-C g1 ***
hg19:Y:25883630-C-T hg38:Y:23737483-C-T P1_Y1 17×T***
hg19:Y:25883669-C-T hg38:Y:23737522-C-T P1_Y1 11×T***
hg19:Y:27001804-A-T hg38:Y:24855657-A-T P1_r4 ***
hg19:Y:27056942-A-G hg38:Y:24910795-A-G P1_r4 ***
hg19:Y:13866949-GA-TG hg38:Y:11746243-GA-TG DYZ17 ***
hg19:Y:26284858-CAAA-C hg38:Y:24138711-CAAA-C P1_Y1 19×A***
hg19:Y:58977828-GACTCCACTCAACTCC-CATTCCCCTCCTCTCA hg38:Y:56831681-GACTCCACTCAACTCC-CATTCCCCTCCTCTCA ***
hg19:Y:58981677-ACA-CCT hg38:Y:56835530-ACA-CCT ***
hg19:Y:58981746-ACATA-CCATT hg38:Y:56835599-ACATA-CCATT ***
hg19:Y:9325160-T-G hg38:Y:9487551-T-G ***
hg19:Y:18011079-C-T hg38:Y:15899199-C-T P7_Dst ***
hg19:Y:10043014-GAGT-CAGC hg38:Y:10205405-GAGT-CAGC ***
hg19:Y:27129799-T-C hg38:Y:24983652-T-C P1_g3 ***
hg19:Y:18011039-A-G hg38:Y:15899159-A-G P7_Dst ***
hg19:Y:13323515-AAAATACCG-TAAACA hg38:Y:11167839-AAAATACCG-TAAACA ***
hg19:Y:3131457-A-ATCTCTTCTCT hg38:Y:3263416-A-ATCTCTTCTCT 14×TCTCT***
hg19:Y:58912415-T-C hg38:Y:56678456-A-G ***
hg19:Y:10073695-T-A hg38:Y:10236086-T-A ***
hg19:Y:10073679-C-G hg38:Y:10236070-C-G ***
hg19:Y:58912778-C-T hg38:Y:56678093-G-A ***
hg19:Y:58984891-G-C hg38:Y:56838744-G-C ***
hg19:Y:10073681-A-T hg38:Y:10236072-A-T ***
hg19:Y:10073680-A-C hg38:Y:10236071-A-C ***
hg19:Y:58996539-G-C hg38:Y:56850392-G-C ***
hg19:Y:58997280-A-C hg38:Y:56851133-A-C ***
hg19:Y:9919482-A-C hg38:Y:10081873-A-C ***
hg19:Y:13644027-G-T hg38:Y:11488351-G-T ***
hg19:Y:2649658-C-A hg38:Y:2781617-C-A ***
hg19:Y:2792597-T-A hg38:Y:2924556-T-A ***
hg19:Y:2809633-C-A hg38:Y:2941592-C-A ***
hg19:Y:2854971-G-T hg38:Y:2986930-G-T ***
hg19:Y:3274193-C-A hg38:Y:3406152-C-A ***
hg19:Y:3535581-C-A hg38:Y:3667540-C-A ***
hg19:Y:4064008-C-A hg38:Y:4195967-C-A ***
hg19:Y:4240816-T-C hg38:Y:4372775-T-C ***
hg19:Y:4282569-G-A hg38:Y:4414528-G-A ***
hg19:Y:4365946-G-T hg38:Y:4497905-G-T ***
hg19:Y:5061616-A-G hg38:Y:5193575-A-G ***
hg19:Y:5077498-A-G hg38:Y:5209457-A-G ***
hg19:Y:5077519-C-A hg38:Y:5209478-C-A ***
hg19:Y:6138927-G-T hg38:Y:6270886-G-T IR3_Dst ***
hg19:Y:6340337-G-A hg38:Y:6472296-G-A IR3_Dst ***
hg19:Y:6545033-C-A hg38:Y:6676992-C-A ***
hg19:Y:6626730-C-A hg38:Y:6758689-C-A ***
hg19:Y:6734812-G-T hg38:Y:6866771-G-T ***
hg19:Y:6734839-C-A hg38:Y:6866798-C-A ***
hg19:Y:6784423-A-C hg38:Y:6916382-A-C ***
hg19:Y:7045634-G-T hg38:Y:7177593-G-T ***
hg19:Y:7050306-A-T hg38:Y:7182265-A-T ***
hg19:Y:7053977-C-A hg38:Y:7185936-C-A ***
hg19:Y:7107068-C-A hg38:Y:7239027-C-A ***
hg19:Y:7179890-C-A hg38:Y:7311849-C-A ***
hg19:Y:7186883-G-T hg38:Y:7318842-G-T ***
hg19:Y:7196386-C-A hg38:Y:7328345-C-A ***
hg19:Y:7225351-T-C hg38:Y:7357310-T-C ***
hg19:Y:7239084-C-A hg38:Y:7371043-C-A ***
hg19:Y:7311933-C-A hg38:Y:7443892-C-A ***
hg19:Y:7316596-T-G hg38:Y:7448555-T-G ***
hg19:Y:7316608-T-G hg38:Y:7448567-T-G ***
hg19:Y:7348654-A-G hg38:Y:7480613-A-G ***
hg19:Y:7363235-G-A hg38:Y:7495194-G-A ***
hg19:Y:7389925-C-A hg38:Y:7521884-C-A ***
hg19:Y:7401053-G-T hg38:Y:7533012-G-T ***
hg19:Y:7414221-T-A hg38:Y:7546180-T-A ***
hg19:Y:7417151-G-T hg38:Y:7549110-G-T ***
hg19:Y:7422529-C-A hg38:Y:7554488-C-A ***
hg19:Y:7436116-G-T hg38:Y:7568075-G-T ***
hg19:Y:7490247-C-T hg38:Y:7622206-C-T IR1_L ***
hg19:Y:7572763-C-A hg38:Y:7704722-C-A ***
hg19:Y:7580080-C-A hg38:Y:7712039-C-A ***
hg19:Y:7709967-G-T hg38:Y:7841926-G-T ***
hg19:Y:7721186-C-A hg38:Y:7853145-C-A ***
hg19:Y:7758854-C-A hg38:Y:7890813-C-A ***
hg19:Y:7873688-C-A hg38:Y:8005647-C-A ***
hg19:Y:7990970-G-T hg38:Y:8122929-G-T ***
hg19:Y:8076784-C-A hg38:Y:8208743-C-A ***
hg19:Y:8171912-C-A hg38:Y:8303871-C-A ***
hg19:Y:8238235-G-T hg38:Y:8370194-G-T ***
hg19:Y:8293882-C-A hg38:Y:8425841-C-A ***
hg19:Y:8344042-C-T hg38:Y:8476001-C-T ***
hg19:Y:8344057-A-T hg38:Y:8476016-A-T ***
hg19:Y:8344058-C-G hg38:Y:8476017-C-G ***
hg19:Y:8344062-T-A hg38:Y:8476021-T-A ***
hg19:Y:8344065-C-G hg38:Y:8476024-C-G ***
hg19:Y:8723615-C-A hg38:Y:8855574-C-A ***
hg19:Y:8748427-A-C hg38:Y:8880386-A-C ***
hg19:Y:8790181-G-T hg38:Y:8922140-G-T ***
hg19:Y:8855926-C-A hg38:Y:8987885-C-A ***
hg19:Y:8856891-C-A hg38:Y:8988850-C-A ***
hg19:Y:8911925-G-T hg38:Y:9043884-G-T ***
hg19:Y:8913736-G-C hg38:Y:9045695-G-C ***
hg19:Y:8914739-C-A hg38:Y:9046698-C-A ***
hg19:Y:8976642-C-A hg38:Y:9139033-C-A BY18018 ***
hg19:Y:9140217-C-A hg38:Y:9302608-C-A ***
hg19:Y:9300729-A-C hg38:Y:9463120-A-C ***
hg19:Y:9301352-G-A hg38:Y:9463743-G-A ***
hg19:Y:9302629-T-C hg38:Y:9465020-T-C ***
hg19:Y:9304120-C-A hg38:Y:9466511-C-A ***
hg19:Y:9329869-C-A hg38:Y:9492260-C-A ***
hg19:Y:9330693-T-G hg38:Y:9493084-T-G ***
hg19:Y:9494119-G-T hg38:Y:9656510-G-T ***
hg19:Y:9517028-G-T hg38:Y:9679419-G-T ***
hg19:Y:9529169-C-A hg38:Y:9691560-C-A IR3_Prx ***
hg19:Y:9529183-T-G hg38:Y:9691574-T-G IR3_Prx ***
hg19:Y:9529194-C-T hg38:Y:9691585-C-T IR3_Prx ***
hg19:Y:9529203-A-G hg38:Y:9691594-A-G IR3_Prx ***
hg19:Y:9540297-T-G hg38:Y:9702688-T-G IR3_Prx ***
hg19:Y:9601615-C-A hg38:Y:9764006-C-A IR3_Prx ***
hg19:Y:9626054-T-G hg38:Y:9788445-T-G IR3_Prx ***
hg19:Y:9890502-C-A hg38:Y:10052893-C-A ***
hg19:Y:9909109-C-A hg38:Y:10071500-C-A ***
hg19:Y:9909121-A-G hg38:Y:10071512-A-G ***
hg19:Y:9909127-T-C hg38:Y:10071518-T-C ***
hg19:Y:9909145-G-A hg38:Y:10071536-G-A ***
hg19:Y:9915592-G-T hg38:Y:10077983-G-T ***
hg19:Y:9921839-C-T hg38:Y:10084230-C-T ***
hg19:Y:9921846-C-G hg38:Y:10084237-C-G ***
hg19:Y:9921915-A-G hg38:Y:10084306-A-G ***
hg19:Y:9921949-C-A hg38:Y:10084340-C-A ***
hg19:Y:9923925-T-C hg38:Y:10086316-T-C ***
hg19:Y:9923940-C-A hg38:Y:10086331-C-A ***
hg19:Y:9928189-C-A hg38:Y:10090580-C-A ***
hg19:Y:9951075-A-G hg38:Y:10113466-A-G ***
hg19:Y:9951859-A-G hg38:Y:10114250-A-G ***
hg19:Y:9951860-T-A hg38:Y:10114251-T-A ***
hg19:Y:9951897-C-T hg38:Y:10114288-C-T ***
hg19:Y:10011674-A-T hg38:Y:10174065-A-T ***
hg19:Y:10026095-C-A hg38:Y:10188486-C-A ***
hg19:Y:10041352-G-A hg38:Y:10203743-G-A ***
hg19:Y:10041479-C-A hg38:Y:10203870-C-A ***
hg19:Y:10043017-T-C hg38:Y:10205408-T-C ***
hg19:Y:10043139-T-C hg38:Y:10205530-T-C ***
hg19:Y:10043184-A-T hg38:Y:10205575-A-T ***
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hg19:Y:24052532-C-A hg38:Y:21906385-C-A P3_b1 ***
hg19:Y:24060311-G-T hg38:Y:21914164-G-T P3_b1 ***
hg19:Y:24189529-C-A hg38:Y:22043382-C-A P3_b1 ***
hg19:Y:24513142-G-T hg38:Y:22366995-G-T ***
hg19:Y:24513611-T-G hg38:Y:22367464-T-G ***
hg19:Y:24513701-C-A hg38:Y:22367554-C-A ***
hg19:Y:24543443-G-T hg38:Y:22397296-G-T P3_t2 ***
hg19:Y:24618912-T-G hg38:Y:22472765-T-G P3_t2 ***
hg19:Y:24657299-G-T hg38:Y:22511152-G-T P3_b2 ***
hg19:Y:24671140-T-A hg38:Y:22524993-T-A P3_b2 ***
hg19:Y:24671301-G-A hg38:Y:22525154-G-A P3_b2 ***
hg19:Y:24701159-T-A hg38:Y:22555012-T-A P3_b2 ***
hg19:Y:24703316-A-C hg38:Y:22557169-A-C P3_b2 ***
hg19:Y:24707220-C-A hg38:Y:22561073-C-A P3_b2 ***
hg19:Y:24713296-G-T hg38:Y:22567149-G-T P3_b2 ***
hg19:Y:24717814-A-C hg38:Y:22571667-A-C P3_b2 ***
hg19:Y:24728572-A-C hg38:Y:22582425-A-C P3_b2 ***
hg19:Y:24739673-C-A hg38:Y:22593526-C-A P3_b2 ***
hg19:Y:24742036-A-G hg38:Y:22595889-A-G P3_b2 ***
hg19:Y:24742747-G-A hg38:Y:22596600-G-A P3_b2 ***
hg19:Y:24765598-G-T hg38:Y:22619451-G-T P3_b2 ***
hg19:Y:24775364-C-A hg38:Y:22629217-C-A P3_b2 ***
hg19:Y:24775381-C-A hg38:Y:22629234-C-A P3_b2 ***
hg19:Y:24776459-G-T hg38:Y:22630312-G-T P3_b2 ***
hg19:Y:24785815-C-A hg38:Y:22639668-C-A P3_b2 ***
hg19:Y:24790327-A-G hg38:Y:22644180-A-G P3_b2 ***
hg19:Y:24792776-A-C hg38:Y:22646629-A-C P3_b2 ***
hg19:Y:24842083-A-G hg38:Y:22695936-A-G IR1_R ***
hg19:Y:24861218-C-T hg38:Y:22715071-C-T IR1_R ***
hg19:Y:24987787-C-A hg38:Y:22841640-C-A g1 ***
hg19:Y:25010626-C-A hg38:Y:22864479-C-A g1 ***
hg19:Y:25127447-C-A hg38:Y:22981300-C-A g1 ***
hg19:Y:25127514-T-G hg38:Y:22981367-T-G g1 ***
hg19:Y:25130013-T-G hg38:Y:22983866-T-G g1 ***
hg19:Y:25157866-A-G hg38:Y:23011719-A-G g1 ***
hg19:Y:25368961-G-A hg38:Y:23222814-G-A P2_r2 ***
hg19:Y:25372102-T-A hg38:Y:23225955-T-A P2_r2 ***
hg19:Y:25374543-G-T hg38:Y:23228396-G-T P2_r2 ***
hg19:Y:25434977-G-A hg38:Y:23288830-G-A P2_r2 ***
hg19:Y:25438786-G-T hg38:Y:23292639-G-T P2_r2 ***
hg19:Y:25446335-A-G hg38:Y:23300188-A-G P2_r2 ***
hg19:Y:25452431-G-T hg38:Y:23306284-G-T P2_r2 ***
hg19:Y:25456401-C-A hg38:Y:23310254-C-A P2_r2 ***
hg19:Y:25465399-A-T hg38:Y:23319252-A-T P2_r2 ***
hg19:Y:25466285-T-G hg38:Y:23320138-T-G P2_r2 ***
hg19:Y:25469106-C-G hg38:Y:23322959-C-G P2_r2 ***
hg19:Y:25480308-A-T hg38:Y:23334161-A-T P2_r2 ***
hg19:Y:25480317-T-A hg38:Y:23334170-T-A P2_r2 ***
hg19:Y:25485143-C-T hg38:Y:23338996-C-T P2_r2 ***
hg19:Y:25492347-A-T hg38:Y:23346200-A-T P2_r2 ***
hg19:Y:25567903-T-G hg38:Y:23421756-T-G P1_gr1 ***
hg19:Y:25628590-A-T hg38:Y:23482443-A-T P1_b3 ***
hg19:Y:25631004-G-T hg38:Y:23484857-G-T P1_b3 ***
hg19:Y:25641627-C-G hg38:Y:23495480-C-G P1_b3 ***
hg19:Y:25646999-T-A hg38:Y:23500852-T-A P1_b3 ***
hg19:Y:25658005-G-T hg38:Y:23511858-G-T P1_b3 ***
hg19:Y:25669937-G-A hg38:Y:23523790-G-A P1_b3 ***
hg19:Y:25677706-T-C hg38:Y:23531559-T-C P1_b3 ***
hg19:Y:25678956-G-T hg38:Y:23532809-G-T P1_b3 ***
hg19:Y:25722235-A-C hg38:Y:23576088-A-C P1_b3 ***
hg19:Y:25762434-A-C hg38:Y:23616287-A-C P1_b3 ***
hg19:Y:25835327-A-G hg38:Y:23689180-A-G P1_b3 ***
hg19:Y:25843648-C-T hg38:Y:23697501-C-T P1_b3 ***
hg19:Y:25896982-T-G hg38:Y:23750835-T-G P1_Y1 ***
hg19:Y:25978691-C-A hg38:Y:23832544-C-A P1_Y1 ***
hg19:Y:26088654-G-T hg38:Y:23942507-G-T P1_Y1 ***
hg19:Y:26135822-G-T hg38:Y:23989675-G-T P1_Y1 ***
hg19:Y:26147096-T-G hg38:Y:24000949-T-G P1_Y1 ***
hg19:Y:26279652-T-C hg38:Y:24133505-T-C P1_Y1 ***
hg19:Y:26283332-C-T hg38:Y:24137185-C-T P1_Y1 ***
hg19:Y:26465222-T-A hg38:Y:24319075-T-A P1_Y1 ***
hg19:Y:26558021-T-C hg38:Y:24411874-T-C P1_g2 ***
hg19:Y:26563214-A-G hg38:Y:24417067-A-G P1_g2 ***
hg19:Y:26676707-G-T hg38:Y:24530560-G-T P1_g2 ***
hg19:Y:26699191-T-C hg38:Y:24553044-T-C P1_g2 ***
hg19:Y:26810630-G-T hg38:Y:24664483-G-T P1_g2 ***
hg19:Y:26810659-C-G hg38:Y:24664512-C-G P1_g2 ***
hg19:Y:26874710-A-G hg38:Y:24728563-A-G P1_r3 ***
hg19:Y:26912659-T-G hg38:Y:24766512-T-G P1_r3 ***
hg19:Y:26914216-C-T hg38:Y:24768069-C-T P1_r3 ***
hg19:Y:26914227-C-T hg38:Y:24768080-C-T P1_r3 ***
hg19:Y:26943827-G-A hg38:Y:24797680-G-A P1_r3 ***
hg19:Y:26955004-C-A hg38:Y:24808857-C-A P1_r3 ***
hg19:Y:26955701-G-C hg38:Y:24809554-G-C P1_r3 ***
hg19:Y:26986468-A-T hg38:Y:24840321-A-T P1_r4 ***
hg19:Y:26993003-T-A hg38:Y:24846856-T-A P1_r4 ***
hg19:Y:27001814-A-C hg38:Y:24855667-A-C P1_r4 ***
hg19:Y:27004253-G-C hg38:Y:24858106-G-C P1_r4 ***
hg19:Y:27004265-G-C hg38:Y:24858118-G-C P1_r4 ***
hg19:Y:27035505-A-T hg38:Y:24889358-A-T P1_r4 ***
hg19:Y:27068158-C-T hg38:Y:24922011-C-T P1_r4 ***
hg19:Y:27095809-G-T hg38:Y:24949662-G-T P1_r4 ***
hg19:Y:27129816-G-T hg38:Y:24983669-G-T P1_g3 ***
hg19:Y:27129829-A-C hg38:Y:24983682-A-C P1_g3 ***
hg19:Y:27130722-C-A hg38:Y:24984575-C-A P1_g3 ***
hg19:Y:27139573-G-T hg38:Y:24993426-G-T P1_g3 ***
hg19:Y:27186530-T-A hg38:Y:25040383-T-A P1_g3 ***
hg19:Y:27214394-A-G hg38:Y:25068247-A-G P1_g3 ***
hg19:Y:27239620-C-T hg38:Y:25093473-C-T P1_g3 ***
hg19:Y:27253349-G-T hg38:Y:25107202-G-T P1_g3 ***
hg19:Y:27256411-C-A hg38:Y:25110264-C-A P1_g3 ***
hg19:Y:27305506-T-A hg38:Y:25159359-T-A P1_g3 ***
hg19:Y:27314296-C-A hg38:Y:25168149-C-A P1_g3 ***
hg19:Y:27328595-A-G hg38:Y:25182448-A-G P1_g3 ***
hg19:Y:27356614-G-C hg38:Y:25210467-G-C P1_g3 ***
hg19:Y:27371052-G-T hg38:Y:25224905-G-T P1_g3 ***
hg19:Y:27497108-C-T hg38:Y:25350961-C-T P1_Y2 ***
hg19:Y:27534344-G-A hg38:Y:25388197-G-A P1_Y2 ***
hg19:Y:27543446-T-C hg38:Y:25397299-T-C P1_Y2 ***
hg19:Y:27711728-A-C hg38:Y:25565581-A-C P1_Y2 ***
hg19:Y:27732895-G-T hg38:Y:25586748-G-T P1_Y2 ***
hg19:Y:27778225-T-A hg38:Y:25632078-T-A P1_Y2 ***
hg19:Y:27780486-G-C hg38:Y:25634339-G-C P1_Y2 ***
hg19:Y:27782293-A-G hg38:Y:25636146-A-G P1_Y2 ***
hg19:Y:27800882-A-G hg38:Y:25654735-A-G P1_Y2 ***
hg19:Y:27837887-C-A hg38:Y:25691740-C-A P1_Y2 ***
hg19:Y:27844638-A-C hg38:Y:25698491-A-C P1_Y2 ***
hg19:Y:27859481-T-A hg38:Y:25713334-T-A P1_Y2 ***
hg19:Y:27859585-C-A hg38:Y:25713438-C-A P1_Y2 ***
hg19:Y:27872586-G-C hg38:Y:25726439-G-C P1_Y2 ***
hg19:Y:27903204-C-A hg38:Y:25757057-C-A P1_Y2 ***
hg19:Y:27917426-T-C hg38:Y:25771279-T-C P1_Y2 ***
hg19:Y:27953678-G-T hg38:Y:25807531-G-T P1_Y2 ***
hg19:Y:27967521-C-A hg38:Y:25821374-C-A P1_Y2 ***
hg19:Y:27982341-A-G hg38:Y:25836194-A-G P1_Y2 ***
hg19:Y:28062296-G-T hg38:Y:25916149-G-T P1_Y2 ***
hg19:Y:28094383-G-T hg38:Y:25948236-G-T P1_Y2 ***
hg19:Y:28117221-G-T hg38:Y:25971074-G-T P1_b4 ***
hg19:Y:28160892-C-T hg38:Y:26014745-C-T P1_b4 ***
hg19:Y:28160931-C-T hg38:Y:26014784-C-T P1_b4 ***
hg19:Y:28182579-C-A hg38:Y:26036432-C-A P1_b4 ***
hg19:Y:28214046-T-A hg38:Y:26067899-T-A P1_b4 ***
hg19:Y:28332322-G-T hg38:Y:26186175-G-T P1_b4 ***
hg19:Y:28438181-T-A hg38:Y:26292034-T-A P1_gr2 ***
hg19:Y:28566878-C-A hg38:Y:26420731-C-A ***
hg19:Y:28772871-C-A hg38:Y:26626724-C-A ***
hg19:Y:58821095-C-A hg38:Y:56769776-G-T ***
hg19:Y:58827414-A-T hg38:Y:56763457-T-A ***
hg19:Y:58828109-C-T hg38:Y:56762762-G-A ***
hg19:Y:58828127-A-C hg38:Y:56762744-T-G ***
hg19:Y:58828128-G-T hg38:Y:56762743-C-A ***
hg19:Y:58828171-T-C hg38:Y:56762700-A-G ***
hg19:Y:58844587-A-T hg38:Y:56746284-T-A ***
hg19:Y:58844594-T-C hg38:Y:56746277-A-G ***
hg19:Y:58846095-A-G hg38:Y:56744776-T-C ***
hg19:Y:58858766-C-G hg38:Y:56732105-G-C ***
hg19:Y:58858776-C-G hg38:Y:56732095-G-C ***
hg19:Y:58873305-C-T hg38:Y:56717566-G-A ***
hg19:Y:58876787-T-C hg38:Y:56714084-A-G ***
hg19:Y:58883950-G-T hg38:Y:56706921-C-A ***
hg19:Y:58912757-C-T hg38:Y:56678114-G-A ***
hg19:Y:58912771-T-C hg38:Y:56678100-A-G ***
hg19:Y:58979038-C-A hg38:Y:56832891-C-A ***
hg19:Y:58991302-C-T hg38:Y:56845155-C-T ***
hg19:Y:58991347-CCT-ACC hg38:Y:56845200-CCT-ACC ***
hg19:Y:13854287-AAA-CAT hg38:Y:11733581-AAA-CAT DYZ17 ***
hg19:Y:58976379-ACATTACAT-CCACTCCAA hg38:Y:56830232-ACATTACAT-CCACTCCAA ***
hg19:Y:13854270-AA-CT hg38:Y:11733564-AA-CT DYZ17 ***
hg19:Y:10073679-CAA-GCT hg38:Y:10236070-CAA-GCT ***
hg19:Y:13446325-GCT-ACA hg38:Y:11290649-GCT-ACA ***
hg19:Y:26046002-CT-C hg38:Y:23899855-CT-C P1_Y1 13×T***
hg19:Y:8094546-GTA-G hg38:Y:8226505-GTA-G ***
hg19:Y:7414231-TCGCG-ACGCA hg38:Y:7546190-TCGCG-ACGCA ***
hg19:Y:7456748-TGT-GGG hg38:Y:7588707-TGT-GGG IR1_L ***
hg19:Y:8094570-GTA-G hg38:Y:8226529-GTA-G ***
hg19:Y:8125049-A-AAAG hg38:Y:8257008-A-AAAG ***
hg19:Y:8344057-ACTCATTGCTAGCTTG-TGTCAATGGTAGTTTA hg38:Y:8476016-ACTCATTGCTAGCTTG-TGTCAATGGTAGTTTA ***
hg19:Y:9360724-GTT-TTG hg38:Y:9523115-GTT-TTG ***
hg19:Y:9556031-A-AT hg38:Y:9718422-A-AT IR3_Prx ***
hg19:Y:9915591-AG-CT hg38:Y:10077982-AG-CT ***
hg19:Y:9915625-TGGAG-GGGAT hg38:Y:10078016-TGGAG-GGGAT ***
hg19:Y:9921827-TTTCTG-ATTCAC hg38:Y:10084218-TTTCTG-ATTCAC ***
hg19:Y:9921879-CA-TG hg38:Y:10084270-CA-TG ***
hg19:Y:9930174-AGAT-GGAA hg38:Y:10092565-AGAT-GGAA ***
hg19:Y:10012814-TC-CT hg38:Y:10175205-TC-CT ***
hg19:Y:10041351-AG-GA hg38:Y:10203742-AG-GA ***
hg19:Y:10042140-TGATTA-CAATTG hg38:Y:10204531-TGATTA-CAATTG ***
hg19:Y:10067111-AATACAGT-GAGG hg38:Y:10229502-AATACAGT-GAGG ***
hg19:Y:10086421-GTA-TTG hg38:Y:10248812-GTA-TTG ***
hg19:Y:13445839-CCTGCT-TCTGTC hg38:Y:11290163-CCTGCT-TCTGTC ***
hg19:Y:13460449-C-CCTT hg38:Y:11304773-C-CCTT ***
hg19:Y:13460451-GCA-G hg38:Y:11304775-GCA-G ***
hg19:Y:13460477-ATC-TTT hg38:Y:11304801-ATC-TTT ***
hg19:Y:13468057-CTTG-GTTA hg38:Y:11312381-CTTG-GTTA ***
hg19:Y:13475503-C-CT hg38:Y:11319827-C-CT ***
hg19:Y:13476188-ATAAAT-TTACAC hg38:Y:11320512-ATAAAT-TTACAC ***
hg19:Y:13488815-CGGAC-GGGAT hg38:Y:11333139-CGGAC-GGGAT ***
hg19:Y:13566931-GTG-A hg38:Y:11411255-GTG-A ***
hg19:Y:13601982-A-AAC hg38:Y:11446306-A-AAC 14×AC***
hg19:Y:13661287-A-AATGTC hg38:Y:11505611-A-AATGTC DYZ17 ***
hg19:Y:13729278-GG-TT hg38:Y:11573602-GG-TT DYZ17 ***
hg19:Y:13739702-GGAATGGAATGGAATGGAA-TTAG hg38:Y:11584026-GGAATGGAATGGAATGGAA-TTAG DYZ17 ***
hg19:Y:13739764-AATGGC-A hg38:Y:11584088-AATGGC-A DYZ17 ***
hg19:Y:13739823-GG-TT hg38:Y:11584147-GG-TT DYZ17 ***
hg19:Y:13804057-AAAGGTGTC-TATGGTCTT hg38:Y:11683351-AAAGGTGTC-TATGGTCTT DYZ17 ***
hg19:Y:13854252-GGAC-TGAA hg38:Y:11733546-GGAC-TGAA DYZ17 ***
hg19:Y:13857641-AAAT-GAAA hg38:Y:11736935-AAAT-GAAA DYZ17 ***
hg19:Y:13857660-TT-GG hg38:Y:11736954-TT-GG DYZ17 ***
hg19:Y:13857791-GAATG-TAATC hg38:Y:11737085-GAATG-TAATC DYZ17 ***
hg19:Y:13858269-AGAA-GGAC hg38:Y:11737563-AGAA-GGAC DYZ17 ***
hg19:Y:13859789-GGAT-AGAC hg38:Y:11739083-GGAT-AGAC DYZ17 ***
hg19:Y:13866125-AAATT-GAATC hg38:Y:11745419-AAATT-GAATC DYZ17 ***
hg19:Y:13983550-G-GGAAGGAAT hg38:Y:11862844-G-GGAAGGAAT ***
hg19:Y:14376265-A-AGACAG hg38:Y:12255561-A-AGACAG ***
hg19:Y:14746176-CAAAAAAA-C hg38:Y:12634245-CAAAAAAA-C 19×A***
hg19:Y:14819056-TTTG-T hg38:Y:12707123-TTTG-T ***
hg19:Y:14937873-C-CTTTTATTTTA hg38:Y:12825948-C-CTTTTATTTTA ***
hg19:Y:15491941-G-GTATA hg38:Y:13380061-G-GTATA 19×TA***
hg19:Y:16145151-ATCAGCATTTTTTAAAAGCTTCCCTGGTACAGTCAAGTTTAAG-A hg38:Y:14033271-ATCAGCATTTTTTAAAAGCTTCCCTGGTACAGTCAAGTTTAAG-A P8_Dst ***
hg19:Y:16176843-C-CA hg38:Y:14064963-C-CA ***
hg19:Y:17083002-CTTTCTTTCT-C hg38:Y:14971122-CTTTCTTTCT-C ***
hg19:Y:17189355-GAAAAAA-G hg38:Y:15077475-GAAAAAA-G 19×A***
hg19:Y:18014662-CCAT-C hg38:Y:15902782-CCAT-C P7_Dst 5×CAT***
hg19:Y:18296168-CT-C hg38:Y:16184288-CT-C P6_Prx 10×T***
hg19:Y:19926979-GTATTTC-TTTTTTT hg38:Y:17815099-GTATTTC-TTTTTTT P5_Prx ***
hg19:Y:20089638-A-AGACAG hg38:Y:17977758-A-AGACAG P5_Dst ***
hg19:Y:20141755-A-AATTG hg38:Y:18029875-A-AATTG P5_Dst ***
hg19:Y:20210243-C-CCAT hg38:Y:18048357-C-CCAT P5_Dst ***
hg19:Y:20214462-CCAA-C hg38:Y:18052576-CCAA-C P5_Dst ***
hg19:Y:20426755-CTC-TTCT hg38:Y:18264869-CTC-TTCT P5_Dst ***
hg19:Y:20439586-A-AGACAG hg38:Y:18277700-A-AGACAG P5_Dst ***
hg19:Y:20716996-TGT-AGA hg38:Y:18555110-TGT-AGA P4_Prx ***
hg19:Y:20897484-A-ACAG hg38:Y:18735598-A-ACAG P4_Dst ***
hg19:Y:20908997-A-AAGGAC hg38:Y:18747111-A-AAGGAC P4_Dst ***
hg19:Y:20933509-CA-C hg38:Y:18771623-CA-C P4_Dst ***
hg19:Y:22481294-GAC-TAT hg38:Y:20319408-GAC-TAT DYZ19 ***
hg19:Y:22505056-AGTGT-TGTGA hg38:Y:20343170-AGTGT-TGTGA DYZ19 ***
hg19:Y:22737231-CAAAAAAA-C hg38:Y:20575345-CAAAAAAA-C 18×A***
hg19:Y:24034446-GC-G hg38:Y:21888299-GC-G ***
hg19:Y:24049158-C-CA hg38:Y:21903011-C-CA 9×A***
hg19:Y:24553438-TA-T hg38:Y:22407291-TA-T P3_t2 ***
hg19:Y:24585505-AAAATGTGGCTAACACACTGC-A hg38:Y:22439358-AAAATGTGGCTAACACACTGC-A P3_t2 ***
hg19:Y:24597883-AGCT-GGCC hg38:Y:22451736-AGCT-GGCC P3_t2 ***
hg19:Y:24700556-A-ACT hg38:Y:22554409-A-ACT P3_b2 ***
hg19:Y:24704847-T-TCTG hg38:Y:22558700-T-TCTG P3_b2 ***
hg19:Y:24710331-AAT-GAA hg38:Y:22564184-AAT-GAA P3_b2 ***
hg19:Y:24743615-TGGGGGGGCAAA-T hg38:Y:22597468-TGGGGGGGCAAA-T P3_b2 ***
hg19:Y:24752764-AT-A hg38:Y:22606617-AT-A P3_b2 ***
hg19:Y:24778541-G-GGCT hg38:Y:22632394-G-GGCT P3_b2 ***
hg19:Y:24787454-CA-C hg38:Y:22641307-CA-C P3_b2 ***
hg19:Y:24792680-G-GAGC hg38:Y:22646533-G-GAGC P3_b2 ***
hg19:Y:24983141-A-AGACAG hg38:Y:22836994-A-AGACAG g1 ***
hg19:Y:25394890-T-TTCTG hg38:Y:23248743-T-TTCTG P2_r2 ***
hg19:Y:25403538-GTA-G hg38:Y:23257391-GTA-G P2_r2 ***
hg19:Y:25429364-TGGGGAGCAAAAGGGGTTATG-T hg38:Y:23283217-TGGGGAGCAAAAGGGGTTATG-T P2_r2 ***
hg19:Y:25432726-A-AGCT hg38:Y:23286579-A-AGCT P2_r2 ***
hg19:Y:25435206-TATTTTAATCTA-T hg38:Y:23289059-TATTTTAATCTA-T P2_r2 ***
hg19:Y:25454174-A-ATCAAATTGT hg38:Y:23308027-A-ATCAAATTGT P2_r2 ***
hg19:Y:25454177-AGC-A hg38:Y:23308030-AGC-A P2_r2 ***
hg19:Y:25455549-A-AG hg38:Y:23309402-A-AG P2_r2 ***
hg19:Y:25460777-CT-C hg38:Y:23314630-CT-C P2_r2 ***
hg19:Y:25480302-GT-TG hg38:Y:23334155-GT-TG P2_r2 ***
hg19:Y:25845397-C-CA hg38:Y:23699250-C-CA P1_b3 8×A***
hg19:Y:26873983-CTT-C hg38:Y:24727836-CTT-C P1_r3 23×T***
hg19:Y:26992907-G-GT hg38:Y:24846760-G-GT P1_r4 24×T***
hg19:Y:27082231-AGGAGGGA-GGGGGGGG hg38:Y:24936084-AGGAGGGA-GGGGGGGG P1_r4 ***
hg19:Y:27117014-AT-A hg38:Y:24970867-AT-A P1_r4 8×T***
hg19:Y:27131696-CC-TT hg38:Y:24985549-CC-TT P1_g3 ***
hg19:Y:27147042-T-TTCCTG hg38:Y:25000895-T-TTCCTG P1_g3 ***
hg19:Y:27151460-AT-A hg38:Y:25005313-AT-A P1_g3 9×T***
hg19:Y:27156678-TA-T hg38:Y:25010531-TA-T P1_g3 ***
hg19:Y:27206479-TCTAAAATAAATA-T hg38:Y:25060332-TCTAAAATAAATA-T P1_g3 ***
hg19:Y:27214371-GTTGTTT-G hg38:Y:25068224-GTTGTTT-G P1_g3 ***
hg19:Y:27231382-GCCCCAGCCT-G hg38:Y:25085235-GCCCCAGCCT-G P1_g3 ***
hg19:Y:27296059-TGGCCAAAACA-T hg38:Y:25149912-TGGCCAAAACA-T P1_g3 ***
hg19:Y:27302041-G-GCTGTC hg38:Y:25155894-G-GCTGTC P1_g3 ***
hg19:Y:27340563-T-TTCTG hg38:Y:25194416-T-TTCTG P1_g3 ***
hg19:Y:27368713-A-AGACAG hg38:Y:25222566-A-AGACAG P1_g3 ***
hg19:Y:27602842-TTTTG-T hg38:Y:25456695-TTTTG-T P1_Y2 ***
hg19:Y:27777421-CA-C hg38:Y:25631274-CA-C P1_Y2 ***
hg19:Y:27791098-A-AGACAG hg38:Y:25644951-A-AGACAG P1_Y2 ***
hg19:Y:28001199-T-GA hg38:Y:25855052-T-GA P1_Y2 ***
hg19:Y:28022181-CCAA-C hg38:Y:25876034-CCAA-C P1_Y2 ***
hg19:Y:28125461-TC-T hg38:Y:25979314-TC-T P1_b4 ***
hg19:Y:28226499-CT-C hg38:Y:26080352-CT-C P1_b4 ***
hg19:Y:28258185-A-AGACAG hg38:Y:26112038-A-AGACAG P1_b4 ***
hg19:Y:28581596-TA-T hg38:Y:26435449-TA-T 8×A***
hg19:Y:28799249-GGA-G hg38:Y:26653102-GGA-G ***
hg19:Y:58819738-CATTG-TATTC hg38:Y:56771129-CAATG-GAATA ***
hg19:Y:58819747-CCA-TCG hg38:Y:56771122-TGG-CGA ***
hg19:Y:58844600-C-CGGTTTGAAGG hg38:Y:56746270-G-GCCTTCAAACC ***
hg19:Y:58908887-TTCC-CTCCATTAT hg38:Y:56681981-GGAA-ATAATGGAG ***
hg19:Y:58972156-TCC-ACA hg38:Y:56826009-TCC-ACA ***
hg19:Y:58972730-TATTCCATTC-CATCCCGTTT hg38:Y:56826583-TATTCCATTC-CATCCCGTTT ***
hg19:Y:58974199-GCCAT-TCCAG hg38:Y:56828052-GCCAT-TCCAG ***
hg19:Y:58975998-CACG-TGTT hg38:Y:56829851-CACG-TGTT ***
hg19:Y:58976588-GG-CT hg38:Y:56830441-GG-CT ***
hg19:Y:58976687-TGC-CAT hg38:Y:56830540-TGC-CAT ***
hg19:Y:58977283-GATCTC-TAGCAA hg38:Y:56831136-GATCTC-TAGCAA ***
hg19:Y:58978016-TTTCCATTG-ATTCCATTC hg38:Y:56831869-TTTCCATTG-ATTCCATTC ***
hg19:Y:58978729-CTTCAAA-TTTTGAC hg38:Y:56832582-CTTCAAA-TTTTGAC ***
hg19:Y:58996993-TC-CA hg38:Y:56850846-TC-CA ***
hg19:Y:5313437-ACCT-A hg38:Y:5445396-ACCT-A 5×CCT***
hg19:Y:21464232-G-GAAAT hg38:Y:19302346-G-GAAAT ***
hg19:Y:58978024-G-GCATTCCATTC hg38:Y:56831877-G-GCATTCCATTC 4×CATTC***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.



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