Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > ZZ10 > FGC42672 > MC14 > BY246 > BY248 > BY2723 > A13941 > A13939

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
3026
BigY2
3026
17707103-C-T 15595223-C-T A13941A13942 YY++
28626036-C-A 26479889-C-A **
9987714-C-A 10150105-C-A **
28779802-T-C 26633655-T-C CTS13012 **
28779887-A-G 26633740-A-G CTS13014 **
18255912-T-A 16144032-T-A **
23609251-C-A 21447365-C-A **
13896781-G-A 11776075-G-A FT146266 **
21464813-C-CT 19302927-C-CT **
7337441-T-G 7469400-T-G **
9371450-G-A 9533841-G-A **
26478066-G-A 24331919-G-A P1_Y1 **
22537299-T-A 20375413-T-A **
13474021-C-T 11318345-C-T BY85929 **
23831311-A-G 21669425-A-G **
9937748-G-T 10100139-G-T **
10662641-T-C **
15620411-C-A 13508531-C-A **
14422775-C-A 12302050-C-A **
18855421-A-T 16743541-A-T **
6697115-C-A 6829074-C-A **
15380096-G-T 13268216-G-T **
20802741-C-A 18640855-C-A P4_Gap **
28556294-T-G 26410147-T-G **
13442587-C-A 11286911-C-A **
28611591-C-A 26465444-C-A **
13319600-C-A 11163924-C-A **
18545001-C-A 16433121-C-A **
24509345-G-A 22363198-G-A **
23579316-C-A 21417430-C-A **
15450350-C-A 13338470-C-A **
15940299-T-A 13828419-T-A **
14992895-C-A 12880980-C-A **
21148451-C-A 18986565-C-A **
21653953-C-A 19492067-C-A **
3164574-C-A 3296533-C-A **
14441967-C-A 12321240-C-A **
4770416-G-T 4902375-G-T **
22598240-T-A 20436354-T-A **
14596183-C-A 12484383-C-A **
4929170-T-A 5061129-T-A **
14446479-C-A 12325752-C-A **
8353228-C-A 8485187-C-A **
10985189-T-A **
10985219-C-CCATCT **
7322656-C-A 7454615-C-A **
19189260-C-A 17077380-C-A **
28711448-C-A 26565301-C-A **
14997953-CT-C 12886038-CT-C **
18420491-C-A 16308611-C-A P6_Gap **
8568491-G-A 8700450-G-A **
10985208-C-CCTTTT **
22991134-C-A 20829248-C-A **
19399950-C-A 17288070-C-A **
4873742-C-A 5005701-C-A **
2970393-C-A 3102352-C-A **
15684263-C-A 13572383-C-A **
7358204-C-A 7490163-C-A **
14485408-G-T 12364677-G-T **
5887754-C-A 6019713-C-A **
23421072-G-A 21259186-G-A **
19465055-C-A 17353175-C-A FT60284 **
19524391-C-A 17412511-C-A **
13328761-C-A 11173085-C-A **
11030082-T-C **
17403817-C-A 15291937-C-A **
15882072-C-T 13770192-C-T **
17503747-G-C 15391867-G-C **
19586696-T-G 17474816-T-G P5_Prx **
18215811-C-A 16103931-C-A **
15669852-T-C 13557972-T-C **
28729447-C-A 26583300-C-A **
15982133-G-A 13870253-G-A **
15619544-T-A 13507664-T-A **
19507268-C-A 17395388-C-A **
35473-C-A **
18454963-CT-C 16343083-CT-C P6_Dst **
15060457-C-A 12948549-C-A **
10888630-T-C **
19544022-C-A 17432142-C-A **
3343810-C-A 3475769-C-A **
9606395-G-T 9768786-G-T IR3_Prx **
10756515-A-C **
28556284-T-G 26410137-T-G **
14931806-C-A 12819871-C-A **
13642736-C-A 11487060-C-A **
19111431-C-A 16999551-C-A **
15115204-C-A 13003291-C-A **
8170313-C-A 8302272-C-A **
19145512-C-A 17033632-C-A **
4875354-G-T 5007313-G-T **
20726907-T-G 18565021-T-G P4_Prx **
9462945-G-T 9625336-G-T **
22739643-G-A 20577757-G-A **
10888593-T-A **
13885877-GA-G 11765171-GA-G **
4069962-C-A 4201921-C-A **
28605425-C-A 26459278-C-A **
8817172-G-T 8949131-G-T **
6356192-A-G 6488151-A-G **
10888573-G-A FGC78329 **
14819642-A-T 12707709-A-T **
7197290-G-A 7329249-G-A **
19206737-AAGGT-A 17094857-AAGGT-A **
23041143-G-T 20879257-G-T **
12379482-C-A **
21189666-C-T 19027780-C-T **
22075926-C-A 19914040-C-A **
9361107-G-T 9523498-G-T **
22077357-TAAA-T 19915471-TAAA-T 14×A**
13212672-C-G 11056996-C-G **
2981298-G-T 3113257-G-T **
21996191-T-A 19834305-T-A **
15866883-C-A 13755003-C-A **
14802040-C-A 12690111-C-A **
15911464-C-A 13799584-C-A **
2668119-C-T 2800078-C-T **
2730122-T-C 2862081-T-C **
2773426-C-T 2905385-C-T **
2795013-G-A 2926972-G-A **
2835669-A-G 2967628-A-G **
2835671-T-A 2967630-T-A **
2845664-CA-C 2977623-CA-C **
2859162-C-A 2991121-C-A **
2882541-C-A 3014500-C-A **
2948903-C-A 3080862-C-A **
3015898-T-C 3147857-T-C **
3158932-G-T 3290891-G-T **
3275738-G-A 3407697-G-A **
3286261-A-T 3418220-A-T **
3347483-T-A 3479442-T-A **
3409855-C-T 3541814-C-T **
3602746-G-T 3734705-G-T **
3620914-A-G 3752873-A-G **
3680959-A-T 3812918-A-T **
3680974-T-A 3812933-T-A **
3950918-C-A 4082877-C-A **
4093537-C-G 4225496-C-G **
4093541-A-G 4225500-A-G **
4093555-T-A 4225514-T-A **
4093560-T-A 4225519-T-A **
4093563-A-T 4225522-A-T **
4136534-A-C 4268493-A-C **
4138494-G-T 4270453-G-T **
4201574-A-G 4333533-A-G **
4326011-A-T 4457970-A-T **
4389451-C-T 4521410-C-T **
4389455-A-T 4521414-A-T **
4389457-A-T 4521416-A-T **
4389504-A-C 4521463-A-C **
4389518-T-A 4521477-T-A **
4389522-T-C 4521481-T-C **
4417420-C-G 4549379-C-G **
4438050-A-T 4570009-A-T **
4438064-T-G 4570023-T-G **
4438072-A-G 4570031-A-G **
4442888-C-A 4574847-C-A **
4444963-G-A 4576922-G-A **
4875351-T-C 5007310-T-C **
4875359-A-T 5007318-A-T **
4875373-T-C 5007332-T-C **
4875377-T-C 5007336-T-C FT241459 **
4925929-G-C 5057888-G-C **
4929164-T-G 5061123-T-G **
4929172-T-C 5061131-T-C **
4929173-G-A 5061132-G-A **
4929186-T-A 5061145-T-A **
4929188-C-G 5061147-C-G **
4929190-A-T 5061149-A-T **
4936574-T-C 5068533-T-C **
5263559-C-T 5395518-C-T **
5263561-T-G 5395520-T-G **
5263563-T-G 5395522-T-G **
5263576-C-A 5395535-C-A **
5263577-T-G 5395536-T-G **
5263579-T-C 5395538-T-C **
5263582-T-A 5395541-T-A **
5263586-G-A 5395545-G-A **
5263624-A-G 5395583-A-G **
5263626-A-G 5395585-A-G **
5336668-G-T 5468627-G-T **
5524830-C-T 5656789-C-T **
5652501-G-T 5784460-G-T **
5782087-C-A 5914046-C-A **
5861594-A-T 5993553-A-T **
5895217-A-G 6027176-A-G **
5969731-G-A 6101690-G-A **
5969732-G-C 6101691-G-C **
5969738-A-T 6101697-A-T **
5969740-C-T 6101699-C-T **
6040086-C-A 6172045-C-A **
6143501-G-A 6275460-G-A IR3_Dst **
6534464-T-A 6666423-T-A **
6644704-C-A 6776663-C-A **
6697308-T-G 6829267-T-G **
6697325-C-A 6829284-C-A **
6697326-A-T 6829285-A-T **
6697335-A-G 6829294-A-G **
6699511-T-C 6831470-T-C **
6771449-A-T 6903408-A-T **
6790128-C-T 6922087-C-T **
6792449-G-T 6924408-G-T **
6815605-A-G 6947564-A-G **
6838477-T-C 6970436-T-C **
6917123-C-A 7049082-C-A **
6919426-C-A 7051385-C-A **
6996561-G-A 7128520-G-A **
7000436-G-T 7132395-G-T **
7018018-G-C 7149977-G-C **
7033646-A-T 7165605-A-T **
7083894-C-A 7215853-C-A **
7084505-C-A 7216464-C-A **
7104891-A-T 7236850-A-T **
7104915-C-T 7236874-C-T **
7104917-G-A 7236876-G-A **
7123741-C-A 7255700-C-A **
7142254-T-C 7274213-T-C **
7172562-G-T 7304521-G-T **
7196256-C-A 7328215-C-A **
7200077-A-G 7332036-A-G **
7240180-C-G 7372139-C-G **
7244199-C-A 7376158-C-A **
7252223-C-A 7384182-C-A **
7253763-A-C 7385722-A-C **
7256057-A-G 7388016-A-G FTA9652 **
7256080-A-T 7388039-A-T **
7292163-C-A 7424122-C-A **
7305702-C-A 7437661-C-A **
7314270-C-A 7446229-C-A **
7359290-C-A 7491249-C-A **
7391675-T-G 7523634-T-G **
7407192-C-A 7539151-C-A **
7428306-A-C 7560265-A-C **
7428310-T-A 7560269-T-A **
7428323-G-T 7560282-G-T **
7428324-A-G 7560283-A-G **
7428329-C-G 7560288-C-G **
7428333-T-C 7560292-T-C **
7428373-A-G 7560332-A-G **
7428377-C-G 7560336-C-G **
7504778-A-G 7636737-A-G IR1_L **
7580142-C-G 7712101-C-G **
7580146-G-T 7712105-G-T **
7590663-C-T 7722622-C-T **
7623482-A-G 7755441-A-G **
7623557-A-C 7755516-A-C **
7623571-G-T 7755530-G-T **
7645477-C-G 7777436-C-G **
7761249-C-A 7893208-C-A **
7896718-C-T 8028677-C-T **
8027925-C-A 8159884-C-A **
8036189-A-G 8168148-A-G **
8058714-T-A 8190673-T-A **
8092200-T-C 8224159-T-C **
8151470-G-A 8283429-G-A **
8154053-C-A 8286012-C-A **
8171875-T-A 8303834-T-A **
8216652-C-A 8348611-C-A **
8293043-T-A 8425002-T-A **
8321454-G-A 8453413-G-A **
8379275-T-C 8511234-T-C **
8555982-T-G 8687941-T-G **
8666719-C-T 8798678-C-T **
8690345-A-G 8822304-A-G **
8690347-G-A 8822306-G-A **
8690402-G-T 8822361-G-T **
8690600-G-A 8822559-G-A **
8704305-C-A 8836264-C-A **
8735744-C-A 8867703-C-A **
8806334-C-T 8938293-C-T **
8818935-A-T 8950894-A-T **
8913292-T-C 9045251-T-C **
9139880-C-T 9302271-C-T **
9162877-TG-T 9325268-TG-T **
9361103-A-C 9523494-A-C **
9361104-T-A 9523495-T-A **
9361110-A-T 9523501-A-T **
9361112-A-C 9523503-A-C **
9371410-C-G 9533801-C-G **
9384539-G-A 9546930-G-A BY79030 **
9386137-T-A 9548528-T-A **
9403453-C-A 9565844-C-A **
9403476-C-A 9565867-C-A **
9502526-G-T 9664917-G-T **
9503954-C-A 9666345-C-A **
9735616-T-C 9898007-T-C IR3_Prx **
9807777-C-A 9970168-C-A **
9820574-T-G 9982965-T-G **
9843175-C-A 10005566-C-A **
9888617-T-C 10051008-T-C **
9888812-G-T 10051203-G-T **
9907495-G-T 10069886-G-T **
9925080-C-A 10087471-C-A **
9935247-T-C 10097638-T-C **
9936533-C-A 10098924-C-A **
9959256-A-C 10121647-A-C **
9974258-AT-A 10136649-AT-A **
9974517-G-T 10136908-G-T **
10051237-C-A 10213628-C-A **
10652540-G-T **
10653182-C-A **
10657122-C-A **
10672145-A-T **
10672149-C-A **
10679404-C-A **
10694068-ACCACT-A **
10747946-C-A **
10750664-A-C **
10750674-A-G **
10750697-A-G **
10750699-T-A **
10750727-T-A **
10750733-C-T **
10772757-A-G **
10787054-A-G **
10787451-A-C **
10789489-A-C **
10790189-C-A **
10803668-T-C **
10803727-A-G **
10842520-C-A **
10842659-C-A **
10842689-C-G **
10842698-T-G **
10859391-C-T **
10864675-A-G **
10869145-G-C **
10869148-T-C **
10869161-T-A **
10875724-T-A **
10887312-T-A **
10888548-T-G **
10888552-G-C **
10888561-A-C **
10888572-A-C **
10888584-A-C **
10888595-T-A **
10894415-G-T **
10930885-C-A **
10937553-T-C **
10948230-G-GCACTC **
10948250-T-C **
10975809-T-G **
10975811-C-G **
10989431-C-A **
10999055-T-C **
11003748-C-CTCTTCTTTCT **
11018843-A-T **
11018847-C-A **
11018850-C-T **
11018908-C-T **
11021392-C-A **
11025182-T-C **
11027078-C-A **
11027082-T-A **
11027101-A-G **
11027104-C-A **
11038110-C-A **
13236328-A-T 11080652-A-T **
13236338-A-G 11080662-A-G FT13164 **
13314477-C-T 11158801-C-T **
13325247-C-A 11169571-C-A **
13493708-T-A 11338032-T-A **
13564558-T-C 11408882-T-C **
13566059-C-A 11410383-C-A **
13594280-C-T 11438604-C-T **
13594282-C-G 11438606-C-G **
13705403-A-G 11549727-A-G **
13728454-C-A 11572778-C-A **
11648592-T-A **
11655605-T-C **
11657177-A-G **
13803389-AATGGAATG-A 11682683-AATGGAATG-A **
13828401-TGAATG-T 11707695-TGAATG-T **
13856918-A-G 11736212-A-G **
13891709-G-C 11771003-G-C **
13993324-A-C 11872618-A-C **
14006893-CA-C 11886187-CA-C **
14009846-C-G 11889140-C-G **
14029219-C-A 11908513-C-A **
14030263-C-A 11909557-C-A **
14071559-T-A 11950853-T-A **
14071561-T-A 11950855-T-A **
14071563-G-C 11950857-G-C **
14071576-C-A 11950870-C-A **
14071577-C-G 11950871-C-G **
14071582-T-A 11950876-T-A **
14104269-C-A 11983563-C-A **
14142047-C-A 12021341-C-A **
14152225-C-A 12031519-C-A FT304320 **
14186950-A-G 12066244-A-G **
14241766-C-T 12121060-C-T **
14254617-T-C 12133911-T-C **
14284579-G-C 12163873-G-C **
14312286-G-A 12191580-G-A FT296090 **
14324388-T-C 12203682-T-C **
14332505-G-A 12211799-G-A **
14351471-C-A 12230766-C-A **
14357765-C-A 12237060-C-A **
14379389-T-A 12258685-T-A **
14409109-C-A 12288406-C-A **
14416666-C-A 12295963-C-A **
14428218-C-A 12307493-C-A **
14458376-C-A 12337649-C-A **
14458386-C-A 12337659-C-A **
14538714-C-A 12426915-C-A **
14540849-G-T 12429050-G-T **
14549301-C-T 12437502-C-T **
14561301-G-T 12449502-G-T **
14580829-G-A 12469029-G-A **
14611737-G-A 12499943-G-A **
14660321-G-T 12548386-G-T **
14672306-C-A 12560372-C-A **
14719997-G-T 12608065-G-T **
14769092-C-A 12657161-C-A **
14771781-A-G 12659850-A-G **
14785552-A-T 12673622-A-T **
14803098-C-A 12691169-C-A **
14819647-G-T 12707714-G-T **
14819652-G-T 12707719-G-T **
14824180-A-G 12712247-A-G **
14836413-C-A 12724480-C-A **
14844368-C-A 12732434-C-A **
14916888-C-A 12804955-C-A **
14970304-A-G 12858379-A-G **
14986590-C-A 12874658-C-A **
15059467-C-A 12947559-C-A **
15074734-C-A 12962824-C-A **
15084449-A-T 12972539-A-T **
15111459-T-C 12999546-T-C **
15137812-G-A 13025899-G-A **
15156757-T-C 13044844-T-C **
15168457-A-C 13056543-A-C **
15173770-G-A 13061856-G-A **
15177022-A-G 13065108-A-G **
15180715-G-T 13068801-G-T **
15223039-C-A 13111125-C-A **
15287967-G-T 13176066-G-T **
15455021-C-A 13343141-C-A **
15469213-T-C 13357333-T-C **
15469232-A-C 13357352-A-C **
15489479-C-A 13377599-C-A **
15490672-T-G 13378792-T-G **
15533726-T-C 13421846-T-C **
15557052-G-GA 13445172-G-GA **
15580070-T-C 13468190-T-C **
15581110-G-TT 13469230-G-TT **
15581214-C-A 13469334-C-A **
15592760-T-A 13480880-T-A **
15619532-G-GAA 13507652-G-GAA 9×A**
15665836-C-A 13553956-C-A **
15669862-A-T 13557982-A-T **
15669865-C-T 13557985-C-T **
15709300-C-A 13597420-C-A **
15792944-G-T 13681064-G-T **
15803361-A-C 13691481-A-C **
15852859-T-A 13740979-T-A **
15946707-G-T 13834827-G-T **
15946867-C-A 13834987-C-A **
15993681-GTATATATA-G 13881801-GTATATATA-G 10×TA**
16004824-C-A 13892944-C-A **
16005958-A-C 13894078-A-C **
16005968-G-C 13894088-G-C **
16005981-G-T 13894101-G-T **
16005983-G-T 13894103-G-T **
16053327-C-A 13941447-C-A **
16084414-C-T 13972534-C-T **
16136055-C-G 14024175-C-G P8_Dst **
16184027-C-T 14072147-C-T **
16191671-A-G 14079791-A-G **
16223491-C-A 14111611-C-A **
16233397-C-A 14121517-C-A **
16269255-C-A 14157375-C-A **
16319490-A-C 14207610-A-C **
16319493-G-C 14207613-G-C **
16319498-A-C 14207618-A-C **
16319512-G-C 14207632-G-C **
16319516-A-T 14207636-A-T **
16357290-C-A 14245410-C-A **
16417556-G-A 14305676-G-A **
16442639-C-A 14330759-C-A **
16463582-C-A 14351702-C-A **
16528198-G-A 14416318-G-A **
16550946-C-A 14439066-C-A **
16581258-G-A 14469378-G-A **
16592465-C-A 14480585-C-A **
16603361-C-A 14491481-C-A **
16604558-C-A 14492678-C-A **
16611992-T-C 14500112-T-C **
16626023-T-G 14514143-T-G **
16656679-C-A 14544799-C-A **
16689782-A-G 14577902-A-G **
16778030-C-A 14666150-C-A **
16886990-C-A 14775110-C-A **
16909269-C-T 14797389-C-T **
16962691-C-A 14850811-C-A **
17013226-C-T 14901346-C-T Y97950 **
17030975-A-G 14919095-A-G **
17038253-T-C 14926373-T-C **
17152718-C-A 15040838-C-A **
17238228-C-A 15126348-C-A **
17297434-T-A 15185554-T-A **
17313720-C-A 15201840-C-A **
17374672-C-A 15262792-C-A FT127022 **
17374674-T-A 15262794-T-A **
17374676-C-T 15262796-C-T **
17374689-T-A 15262809-T-A **
17374690-T-A 15262810-T-A **
17374692-C-G 15262812-C-G **
17374699-T-G 15262819-T-G **
17374707-C-A 15262827-C-A **
17503729-T-A 15391849-T-A **
17503731-T-A 15391851-T-A **
17503733-C-G 15391853-C-G **
17503749-T-G 15391869-T-G **
17503752-G-A 15391872-G-A **
17503756-T-C 15391876-T-C **
17503794-A-T 15391914-A-T **
17503800-A-C 15391920-A-C **
17547538-C-A 15435658-C-A **
17575148-G-A 15463268-G-A **
17580748-C-A 15468868-C-A **
17633200-C-A 15521320-C-A **
17634569-C-A 15522689-C-A **
17648660-C-T 15536780-C-T **
17673760-C-A 15561880-C-A **
17688046-G-A 15576166-G-A **
17689384-C-A 15577504-C-A **
17860748-G-T 15748868-G-T **
17898015-T-C 15786135-T-C **
17925362-C-A 15813482-C-A **
17941766-C-A 15829886-C-A **
17943986-C-A 15832106-C-A **
17950752-G-T 15838872-G-T **
18090261-A-G 15978381-A-G **
18121858-T-A 16009978-T-A **
18184826-G-A 16072946-G-A **
18248333-C-A 16136453-C-A **
18255917-T-A 16144037-T-A **
18255918-A-G 16144038-A-G FT365887 **
18259247-C-A 16147367-C-A **
18423854-C-A 16311974-C-A P6_Gap **
18462550-A-C 16350670-A-C P6_Dst **
18564385-C-A 16452505-C-A **
18573578-G-A 16461698-G-A **
18573582-A-G 16461702-A-G **
18692734-C-A 16580854-C-A **
18692749-T-A 16580869-T-A **
18692751-C-T 16580871-C-T **
18692753-G-T 16580873-G-T **
18692772-T-G 16580892-T-G BY123165 **
18692775-C-A 16580895-C-A **
18872341-G-T 16760461-G-T **
18892112-T-C 16780232-T-C **
18892115-A-G 16780235-A-G **
18996884-C-CTTT 16885004-C-CTTT 13×T**
19001311-C-A 16889431-C-A **
19035897-C-A 16924017-C-A **
19037728-A-T 16925848-A-T **
19112612-C-T 17000732-C-T **
19168511-A-G 17056631-A-G **
19187413-T-G 17075533-T-G **
19244698-G-A 17132818-G-A **
19247166-C-T 17135286-C-T **
19274631-C-A 17162751-C-A **
19351492-G-A 17239612-G-A **
19351494-T-C 17239614-T-C **
19377169-G-T 17265289-G-T 4×GAAA**
19520833-C-G 17408953-C-G **
19520835-C-G 17408955-C-G **
19530452-C-A 17418572-C-A **
19586697-T-TGTG 17474817-T-TGTG P5_Prx **
19670771-T-TCGCA 17558891-T-TCGCA P5_Prx **
19746886-T-TGAGAGA 17635006-T-TGAGAGA P5_Prx **
20001311-A-T 17889431-A-T P5_Prx **
20326039-A-G 18164153-A-G P5_Dst **
20330308-C-A 18168422-C-A P5_Dst **
20637632-G-A 18475746-G-A P4_Prx **
20690178-C-CTA 18528292-C-CTA P4_Prx 12×T**
20690260-T-C 18528374-T-C P4_Prx **
20809871-C-G 18647985-C-G P4_Gap **
20961915-G-A 18800029-G-A P4_Dst **
21006497-G-A 18844611-G-A P4_Dst **
21006499-G-T 18844613-G-T P4_Dst **
21006501-G-A 18844615-G-A P4_Dst **
21006520-A-T 18844634-A-T P4_Dst **
21042175-C-A 18880289-C-A **
21116835-A-G 18954949-A-G **
21117015-A-T 18955129-A-T **
21134851-C-A 18972965-C-A **
21163384-C-A 19001498-C-A **
21189984-C-A 19028098-C-A **
21262360-T-C 19100474-T-C **
21263615-T-A 19101729-T-A **
21265190-G-A 19103304-G-A **
21315029-C-A 19153143-C-A **
21316897-C-A 19155011-C-A **
21346300-A-T 19184414-A-T **
21392302-G-T 19230416-G-T **
21444404-C-A 19282518-C-A **
21491252-C-A 19329366-C-A **
21526925-C-A 19365039-C-A **
21532708-A-G 19370822-A-G **
21545427-C-T 19383541-C-T **
21565937-C-A 19404051-C-A **
21673118-C-A 19511232-C-A **
21732699-GA-G 19570813-GA-G **
21822965-A-C 19661079-A-C **
21822971-A-T 19661085-A-T **
21822986-T-C 19661100-T-C **
21822988-G-T 19661102-G-T **
21846623-A-C 19684737-A-C **
21846643-G-T 19684757-G-T **
21861480-G-A 19699594-G-A **
21885716-A-G 19723830-A-G **
21885718-A-C 19723832-A-C **
21885720-C-T 19723834-C-T **
21895532-C-A 19733646-C-A **
21932542-GT-G 19770656-GT-G **
21996190-T-A 19834304-T-A **
22030058-G-T 19868172-G-T **
22079721-A-C 19917835-A-C **
22090024-A-G 19928138-A-G **
22101996-G-T 19940110-G-T **
22128740-C-A 19966854-C-A **
22164176-A-C 20002290-A-C **
22164179-T-C 20002293-T-C **
22164185-A-C 20002299-A-C **
22167352-C-A 20005466-C-A **
22176281-T-G 20014395-T-G **
22191532-T-C 20029646-T-C **
22237660-T-A 20075774-T-A DYZ19 **
22241178-G-T 20079292-G-T DYZ19 **
22258161-A-G 20096275-A-G DYZ19 **
22258166-A-C 20096280-A-C DYZ19 **
22345753-T-C 20183867-T-C DYZ19 **
22536414-T-C 20374528-T-C **
22536434-A-C 20374548-A-C **
22537114-C-T 20375228-C-T **
22545326-G-T 20383440-G-T **
22563086-C-A 20401200-C-A **
22580274-G-C 20418388-G-C **
22587039-G-C 20425153-G-C **
22590708-C-A 20428822-C-A **
22598213-A-G 20436327-A-G **
22598239-T-G 20436353-T-G **
22651445-C-A 20489559-C-A **
22766799-C-A 20604913-C-A **
22774869-C-A 20612983-C-A 21×T**
22774873-T-TCA 20612987-T-TCA **
22804228-C-G 20642342-C-G **
22808752-G-T 20646866-G-T **
22904198-C-T 20742312-C-T **
22916891-G-A 20755005-G-A **
22916921-C-A 20755035-C-A **
22991073-C-A 20829187-C-A **
22993411-C-A 20831525-C-A **
23037255-T-C 20875369-T-C **
23037972-T-C 20876086-T-C **
23039657-A-G 20877771-A-G **
23039685-C-A 20877799-C-A **
23058651-T-G 20896765-T-G **
23067008-C-A 20905122-C-A **
23136237-C-A 20974351-C-A **
23137051-A-G 20975165-A-G **
23146000-C-A 20984114-C-A **
23205833-A-C 21043947-A-C **
23205836-C-T 21043950-C-T **
23205842-G-T 21043956-G-T **
23205857-A-C 21043971-A-C **
23205859-A-G 21043973-A-G **
23274888-C-A 21113002-C-A **
23291266-T-C 21129380-T-C **
23315967-C-T 21154081-C-T **
23315986-T-C 21154100-T-C **
23317560-G-C 21155674-G-C **
23317562-A-T 21155676-A-T **
23317574-C-A 21155688-C-A **
23342089-G-T 21180203-G-T **
23377893-C-A 21216007-C-A **
23421070-T-A 21259184-T-A **
23425100-C-A 21263214-C-A **
23435830-C-A 21273944-C-A **
23504124-G-T 21342238-G-T **
23510508-G-A 21348622-G-A **
23523572-G-T 21361686-G-T **
23777559-G-GA 21615673-G-GA 8×A**
23808171-C-A 21646285-C-A **
23808669-G-T 21646783-G-T **
21780444-C-A **
24070748-T-G 21924601-T-G P3_b1 **
24070752-A-G 21924605-A-G P3_b1 **
24070767-AC-A 21924620-AC-A P3_b1 **
24361043-T-C 22214896-T-C **
24381269-G-A 22235122-G-A **
24390008-C-A 22243861-C-A **
24416846-C-A 22270699-C-A **
24509347-A-C 22363200-A-C **
25931539-G-A 23785392-G-A P1_Y1 **
25931541-A-G 23785394-A-G P1_Y1 **
25931562-A-T 23785415-A-T P1_Y1 **
25931606-A-T 23785459-A-T P1_Y1 **
25937954-C-T 23791807-C-T P1_Y1 **
25964879-C-G 23818732-C-G P1_Y1 **
26043718-T-G 23897571-T-G P1_Y1 **
26043720-T-C 23897573-T-C P1_Y1 **
26043722-T-G 23897575-T-G P1_Y1 **
26043736-T-A 23897589-T-A P1_Y1 **
26043738-T-C 23897591-T-C P1_Y1 **
26043741-T-G 23897594-T-G P1_Y1 **
26100840-G-A 23954693-G-A P1_Y1 **
26100842-T-A 23954695-T-A P1_Y1 **
26100845-A-T 23954698-A-T P1_Y1 **
26153980-T-C 24007833-T-C P1_Y1 **
26478064-C-G 24331917-C-G P1_Y1 **
26478132-G-A 24331985-G-A P1_Y1 **
26478133-A-T 24331986-A-T P1_Y1 **
27595853-G-A 25449706-G-A P1_Y2 **
27918648-T-TC 25772501-T-TC P1_Y2 **
27943933-G-T 25797786-G-T P1_Y2 **
27943960-A-T 25797813-A-T P1_Y2 **
27943972-ACAC-A 25797825-ACAC-A P1_Y2 **
27943978-A-T 25797831-A-T P1_Y2 **
27943983-C-CGT 25797836-C-CGT P1_Y2 **
27944023-T-A 25797876-T-A P1_Y2 **
28078725-A-T 25932578-A-T P1_Y2 **
28402127-A-G 26255980-A-G P1_gr2 **
28468807-T-C 26322660-T-C **
28468825-A-G 26322678-A-G **
28517289-C-A 26371142-C-A **
28531389-T-G 26385242-T-G **
28544525-C-A 26398378-C-A **
28547291-G-T 26401144-G-T **
28556291-A-G 26410144-A-G **
28562245-T-A 26416098-T-A **
28585885-C-A 26439738-C-A **
28622356-G-T 26476209-G-T **
28624017-T-C 26477870-T-C **
28660849-C-A 26514702-C-A **
28727830-T-A 26581683-T-A **
28766320-C-A 26620173-C-A **
28774012-G-T 26627865-G-T **
28779576-A-T 26633429-A-T **
28781452-C-A 26635305-C-A **
56742665-TGGAA-T **
56830290-T-G **
56830312-C-G **
56847599-G-T **
56858556-C-A **
14612234-G-T 12500440-G-T ***
9420175-T-C 9582566-T-C ***
22456658-T-C,G 20294772-T-C,G DYZ19 ***
18965642-C-T 16853762-C-T 19×T***
9940239-C-A 10102630-C-A ***
13208774-G-A ***
14109316-CTT-C,CT 11988610-CTT-C,CT 14×T***
16707120-C-A 14595240-C-A ***
15993724-C-A 13881844-C-A ***
16412731-CA-C 14300851-CA-C 8×A***
56832514-C-A,G ***
23732232-CA-C,CAA 21570346-CA-C,CAA 17×A***
13643379-C-A 11487703-C-A ***
18682448-C-A 16570568-C-A ***
17012786-CATAT-C,CATATAT 14900906-CATAT-C,CATATAT 12×AT***
56832479-T-C,G ***
17146550-CA-C,CAA 15034670-CA-C,CAA 12×A***
5851518-C-A 5983477-C-A ***
3389855-C-A 3521814-C-A ***
19128800-C-T 17016920-C-T ***
17170187-TTG-G,TTT 15058307-TTG-G,TTT ***
2711856-C-T 2843815-C-T ***
2979274-C-A 3111233-C-A ***
3389864-C-A 3521823-C-A ***
4002697-CA-C 4134656-CA-C 9×A***
4063036-C-A 4194995-C-A ***
4671921-C-A 4803880-C-A ***
4960752-A-C 5092711-A-C ***
5613297-C-A 5745256-C-A ***
5620992-A-G 5752951-A-G ***
5817299-C-A 5949258-C-A ***
6428058-A-T 6560017-A-T ***
6664168-G-T 6796127-G-T ***
6815712-C-A 6947671-C-A ***
6918653-C-A 7050612-C-A ***
7242353-C-A 7374312-C-A ***
7349789-C-T 7481748-C-T ***
7518561-C-A 7650520-C-A ***
7523066-C-A 7655025-C-A ***
7524852-C-A 7656811-C-A ***
7760198-G-T 7892157-G-T ***
7853357-G-T 7985316-G-T ***
7996536-C-A 8128495-C-A ***
8115243-T-G 8247202-T-G ***
8217043-C-A 8349002-C-A ***
8218336-T-A 8350295-T-A ***
8351582-A-G 8483541-A-G ***
8384746-T-C 8516705-T-C ***
8555948-C-A 8687907-C-A ***
8666769-C-T 8798728-C-T ***
8703191-C-A 8835150-C-A ***
8730809-C-A 8862768-C-A ***
8734891-T-C 8866850-T-C ***
9172360-C-A 9334751-C-A ***
9398336-C-A 9560727-C-A ***
9839932-C-A 10002323-C-A ***
10625596-C-A ***
13323538-C-A 11167862-C-A ***
13463102-G-T 11307426-G-T ***
14550443-G-T 12438644-G-T ***
14570181-G-A 12458381-G-A ***
14610487-G-T 12498689-G-T ***
14729765-G-A 12617833-G-A ***
14747572-T-A 12635641-T-A ***
14863876-A-T 12751942-A-T ***
14879276-C-T 12767346-C-T ***
15130556-C-A 13018643-C-A ***
15212348-C-A 13100434-C-A ***
15276283-T-C 13164372-T-C ***
15341188-GA-G 13229307-GA-G 9×A***
15914905-G-A 13803025-G-A ***
16019292-G-T 13907412-G-T ***
16293956-C-A 14182076-C-A ***
16509421-C-A 14397541-C-A ***
16587476-C-A 14475596-C-A ***
16588055-A-T 14476175-A-T FT363208 ***
16593643-C-A 14481763-C-A ***
16706995-C-A 14595115-C-A ***
17192867-TGGG-T,TGG 15080987-TGGG-T,TGG 12×G***
17403977-AGGAG-A 15292097-AGGAG-A 5×GGAG***
17580362-C-A 15468482-C-A F21911 ***
17729501-C-A 15617621-C-A ***
17865881-T-C 15754001-T-C FTB37392 ***
18109120-C-A 15997240-C-A ***
18158765-C-A 16046885-C-A ***
18250086-C-A 16138206-C-A ***
18575341-C-A 16463461-C-A ***
18692515-C-A 16580635-C-A ***
18742212-C-A 16630332-C-A ***
18843873-ATT-A 16731993-ATT-A 11×T***
18852770-A-G 16740890-A-G ***
18900988-C-A 16789108-C-A ***
18907728-C-A 16795848-C-A ***
18955615-C-A 16843735-C-A ***
18962482-C-A 16850602-C-A FT207688 ***
19045687-CT-C,CTTT 16933807-CT-C,CTTT 17×T***
19067377-C-A 16955497-C-A ***
19304345-G-A 17192465-G-A ***
19356731-G-A 17244851-G-A ***
19413021-C-A 17301141-C-A ***
19418553-A-G 17306673-A-G ***
21045957-T-C 18884071-T-C ***
21082136-G-A 18920250-G-A ***
21082146-T-C 18920260-T-C ***
21082147-G-A 18920261-G-A ***
21100541-C-A 18938655-C-A ***
21127274-C-A 18965388-C-A ***
21212467-C-A 19050581-C-A ***
21223168-A-T 19061282-A-T ***
21284393-C-A 19122507-C-A ***
21362514-T-G 19200628-T-G ***
21368190-C-A 19206304-C-A ***
21392173-C-A 19230287-C-A ***
21732402-C-A 19570516-C-A ***
21961549-C-A 19799663-C-A ***
21971649-C-A 19809763-C-A ***
22048230-CAAAAA-C,CAAAA 19886344-CAAAAA-C,CAAAA 15×A***
22529184-C-A 20367298-C-A ***
22864945-T-C 20703059-T-C ***
23053165-C-A 20891279-C-A ***
23186312-C-T 21024426-C-T ***
23232322-C-A 21070436-C-A FT375979 ***
23252865-C-A 21090979-C-A ***
23397499-C-A 21235613-C-A ***
23428704-C-A 21266818-C-A ***
23440183-C-A 21278297-C-A ***
23511969-G-A 21350083-G-A ***
23633602-C-A 21471716-C-A ***
23818071-TA-T 21656185-TA-T ***
56833343-C-G,T ***
30629-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.