Kane
FTDNA: 228009MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 228009 |
|---|---|---|---|---|---|---|---|---|
| 2663708-A-T | 2795667-A-T | M8944 E260 | Y | Y | 8×T | + | ||
| 7064505-T-C | 7196464-T-C | FGC81287 | Y | Y | + | |||
| 7278755-A-G | 7410714-A-G | FGC13427 | Y | Y | + | |||
| 7682147-T-C | 7814106-T-C | FGC13428 | Y | Y | + | |||
| 7834708-G-A | 7966667-G-A | FGC13429 | Y | Y | + | |||
| 7858545-G-A | 7990504-G-A | FGC13430 | Y | Y | + | |||
| 7859201-G-C | 7991160-G-C | FGC13431 | Y | Y | + | |||
| 8383741-G-A | 8515700-G-A | FGC13432 | Y | Y | + | |||
| 8611362-T-C | 8743321-T-C | FGC13433 | Y | Y | + | |||
| 8808323-C-T | 8940282-C-T | BY76065 | Y | Y | + | |||
| 16638458-T-TTG | 14526578-T-TTG | 9×TG | + | |||||
| 16831229-A-AT | 14719349-A-AT | 8×T | + | |||||
| 18995237-A-T | 16883357-A-T | FGC41891 | PF5101 | Y | Y | 5×ATTT | + | |
| 20824599-CTA-C | 18662713-CTA-C | P4_Gap | + | |||||
| 21256381-G-A | 19094495-G-A | FGC13438 | Y | Y | + | |||
| 21661482-GT-G | 19499596-GT-G | BY19295 | BY22302 | + | ||||
| 21816649-AT-A | 19654763-AT-A | 9×T | + | |||||
| 22263212-A-G | 20101326-A-G | FGC81290 | DYZ19 | + | ||||
| 22444729-A-T | 20282843-A-T | BY24490 | DYZ19 | + | ||||
| 22469653-G-A | 20307767-G-A | FGC81291 | DYZ19 | + | ||||
| 22549335-C-T | 20387449-C-T | FGC13439 | Y | Y | + | |||
| 22661545-G-A | 20499659-G-A | BY139846 | Y | Y | + | |||
| 22847534-T-G | 20685648-T-G | FGC13440 | Y | Y | + | |||
| 22925785-G-A | 20763899-G-A | FGC81292 | Y | Y | + | |||
| 22973238-G-T | 20811352-G-T | FGC13441 | Y | Y | + | |||
| 23751541-T-C | 21589655-T-C | FGC13442 | Y | + | ||||
| 23761608-AAAGAAGAAG-A | 21599722-AAAGAAGAAG-A | 23×AAG | + | |||||
| 28789796-T-C | 26643649-T-C | FGC81294 | + | |||||
| 21406999-C-T | 19245113-C-T | L764 YSC0000271 Z2849 | Y | Y | * | |||
| 13856438-T-G | 11735732-T-G | ** | ||||||
| 58908819-A-C | 56682052-T-G | ** | ||||||
| 6715157-C-A | 6847116-C-A | ** | ||||||
| 7167411-G-C | 7299370-G-C | FGC13426 | ** | |||||
| 13867908-ACTCG-A | 11747202-ACTCG-A | ** | ||||||
| 15740440-G-A | 13628560-G-A | YSC0000180 | ** | |||||
| 20294373-T-TA | 18132487-T-TA | P5_Dst | ** | |||||
| 22223011-T-C | 20061125-T-C | DYZ19 | ** | |||||
| 28594379-G-A | 26448232-G-A | CTS12487 | ** | |||||
| 28594416-T-C | 26448269-T-C | CTS12488 | ** | |||||
| 13139239-T-C | 10628725-T-C | 10×CATTC | *** | |||||
| 13140268-T-C | 10629754-T-C | *** | ||||||
| 13458332-T-A | 11302656-T-A | *** | ||||||
| 13681057-A-T | 11525381-A-T | *** | ||||||
| 13813390-A-T | 11692684-A-T | *** | ||||||
| 13813401-A-G | 11692695-A-G | *** | ||||||
| 13832481-A-G | 11711775-A-G | *** | ||||||
| 13847298-A-G | 11726592-A-G | *** | ||||||
| 13851212-C-G | 11730506-C-G | *** | ||||||
| 13867780-T-A | 11747074-T-A | *** | ||||||
| 13868174-T-C | 11747468-T-C | *** | ||||||
| 13868186-G-A | 11747480-G-A | *** | ||||||
| 13869592-A-T | 11748886-A-T | *** | ||||||
| 22241572-G-A | 20079686-G-A | DYZ19 | *** | |||||
| 28786731-A-G | 26640584-A-G | *** | ||||||
| 13446903-C-T | 11291227-C-T | *** | ||||||
| 13662121-T-A | 11506445-T-A | *** | ||||||
| 13682998-G-C | 11527322-G-C | FT229964 | *** | |||||
| 22256886-A-T | 20095000-A-T | DYZ19 | *** | |||||
| 13452959-A-C,T | 11297283-A-C,T | *** | ||||||
| 13801266-C-A | 11680560-C-A | *** | ||||||
| 13855596-T-A,G | 11734890-T-A,G | *** | ||||||
| 13195712-T-A | 11040036-T-A | *** | ||||||
| 13868195-G-A | 11747489-G-A | *** | ||||||
| 13813535-C-T | 11692829-C-T | *** | ||||||
| 13847297-A-T | 11726591-A-T | *** | ||||||
| 28800185-C-T | 26654038-C-T | *** | ||||||
| 13457407-GTTTCC-G | 11301731-GTTTCC-G | *** | ||||||
| 13684879-G-A | 11529203-G-A | FT448344 | *** | |||||
| 13831646-C-G | 11710940-C-G | *** | ||||||
| 28786637-TGGCAC-T | 26640490-TGGCAC-T | *** | ||||||
| 13680714-C-T | 11525038-C-T | *** | ||||||
| 13812802-T-G | 11692096-T-G | *** | ||||||
| 13813436-C-T | 11692730-C-T | *** | ||||||
| 13854420-C-A | 11733714-C-A | A17009 | *** | |||||
| 13854421-T-C | 11733715-T-C | *** | ||||||
| 58912821-G-T | 56678050-C-A | *** | ||||||
| 13454113-T-A | 11298437-T-A | *** | ||||||
| 13458212-T-A | 11302536-T-A | *** | ||||||
| 13458216-A-C | 11302540-A-C | *** | ||||||
| 13458857-C-A | 11303181-C-A | *** | ||||||
| 13799372-T-A | 11678666-T-A | *** | ||||||
| 13799394-T-G | 11678688-T-G | *** | ||||||
| 13801218-G-A | 11680512-G-A | *** | ||||||
| 13810971-G-A | 11690265-G-A | *** | ||||||
| 13845661-A-G | 11724955-A-G | *** | ||||||
| 58981274-C-T | 56835127-C-T | *** | ||||||
| 7651836-A-G | 7783795-A-G | M4998 | *** | |||||
| 13826087-A-G | 11705381-A-G | Z12005 | *** | |||||
| 13138073-T-C | 10627559-T-C | *** | ||||||
| 13138078-C-T | 10627564-C-T | *** | ||||||
| 13142916-T-A | 10632402-T-A | *** | ||||||
| 13137442-G-C | 10626928-G-C | *** | ||||||
| 13138099-A-T | 10627585-A-T | *** | ||||||
| 13138229-A-T | 10627715-A-T | *** | ||||||
| 13138230-G-C | 10627716-G-C | *** | ||||||
| 13138253-G-C | 10627739-G-C | *** | ||||||
| 13652042-C-G | 11496366-C-G | FT447239 | *** | |||||
| 13680694-A-T | 11525018-A-T | *** | ||||||
| 13680705-A-G | 11525029-A-G | *** | ||||||
| 13683038-A-G | 11527362-A-G | *** | ||||||
| 13686887-G-A | 11531211-G-A | *** | ||||||
| 13799434-G-A | 11678728-G-A | *** | ||||||
| 13805325-T-C | 11684619-T-C | *** | ||||||
| 13805492-A-G | 11684786-A-G | *** | ||||||
| 13805495-A-T | 11684789-A-T | *** | ||||||
| 13805505-C-T | 11684799-C-T | *** | ||||||
| 13818145-C-A | 11697439-C-A | *** | ||||||
| 13818637-C-G | 11697931-C-G | *** | ||||||
| 13818641-C-T | 11697935-C-T | *** | ||||||
| 13818647-T-G | 11697941-T-G | *** | ||||||
| 13818648-T-G | 11697942-T-G | *** | ||||||
| 13818653-T-G | 11697947-T-G | *** | ||||||
| 13818655-G-A | 11697949-G-A | *** | ||||||
| 13818662-C-G | 11697956-C-G | *** | ||||||
| 13818663-C-G | 11697957-C-G | *** | ||||||
| 13818693-G-A | 11697987-G-A | FTA3208 | *** | |||||
| 13832471-C-A,G | 11711765-C-A,G | *** | ||||||
| 13832535-A-G | 11711829-A-G | *** | ||||||
| 13832545-A-G | 11711839-A-G | FGC33547 | *** | |||||
| 13832550-A-G | 11711844-A-G | *** | ||||||
| 13833152-G-A | 11712446-G-A | *** | ||||||
| 13838364-G-A | 11717658-G-A | *** | ||||||
| 13842277-A-G | 11721571-A-G | *** | ||||||
| 13847328-A-G | 11726622-A-G | *** | ||||||
| 13851794-A-G | 11731088-A-G | *** | ||||||
| 13856765-A-T | 11736059-A-T | *** | ||||||
| 13868331-C-G | 11747625-C-G | *** | ||||||
| 13869591-A-C | 11748885-A-C | *** | ||||||
| 22358215-A-C | 20196329-A-C | DYZ19 | *** | |||||
| 28784789-A-G | 26638642-A-G | FT461733 | *** | |||||
| 28785584-A-G | 26639437-A-G | *** | ||||||
| 28785592-G-T | 26639445-G-T | *** | ||||||
| 28785879-C-T | 26639732-C-T | *** | ||||||
| 28786003-G-A | 26639856-G-A | *** | ||||||
| 28786741-A-G | 26640594-A-G | *** | ||||||
| 58975713-C-A | 56829566-C-A | *** | ||||||
| 58977216-C-T | 56831069-C-T | *** | ||||||
| 58977241-T-C | 56831094-T-C | *** | ||||||
| 22147806-T-C | 19985920-T-C | BY212991 | *** | |||||
| 13803155-C-A | 11682449-C-A | *** | ||||||
| 13803159-A-T | 11682453-A-T | *** | ||||||
| 13447731-C-T | 11292055-C-T | *** | ||||||
| 13681113-A-G | 11525437-A-G | FT44708 | *** | |||||
| 13689148-G-A | 11533472-G-A | *** | ||||||
| 13858000-C-G | 11737294-C-G | *** | ||||||
| 13868316-A-G | 11747610-A-G | *** | ||||||
| 13667207-C-G | 11511531-C-G | *** | ||||||
| 28800091-GGAATT-G | 26653944-GGAATT-G | *** | ||||||
| 13143892-C-T | 10633378-C-T | *** | ||||||
| 13446748-C-G | 11291072-C-G | *** | ||||||
| 13651493-C-G | 11495817-C-G | *** | ||||||
| 13658904-A-C | 11503228-A-C | *** | ||||||
| 13683145-T-A | 11527469-T-A | *** | ||||||
| 13683232-A-G | 11527556-A-G | *** | ||||||
| 13801849-C-G | 11681143-C-G | *** | ||||||
| 13801853-C-T | 11681147-C-T | *** | ||||||
| 13826104-C-A | 11705398-C-A | *** | ||||||
| 13838702-G-A | 11717996-G-A | *** | ||||||
| 13838703-T-A | 11717997-T-A | *** | ||||||
| 13838712-T-G | 11718006-T-G | *** | ||||||
| 13852245-A-T | 11731539-A-T | *** | ||||||
| 13863471-T-A | 11742765-T-A | *** | ||||||
| 24033676-C-T | 21887529-C-T | *** | ||||||
| 28785906-G-A | 26639759-G-A | *** | ||||||
| 28786053-A-G | 26639906-A-G | *** | ||||||
| 28790595-G-C | 26644448-G-C | *** | ||||||
| 28790599-T-A | 26644452-T-A | *** | ||||||
| 28799850-G-A | 26653703-G-A | *** | ||||||
| 13143842-T-C | 10633328-T-C | *** | ||||||
| 13454172-G-C | 11298496-G-C | *** | ||||||
| 13599807-C-G | 11444131-C-G | *** | ||||||
| 13652249-T-A | 11496573-T-A | *** | ||||||
| 13838286-C-G | 11717580-C-G | *** | ||||||
| 13838314-C-A | 11717608-C-A | *** | ||||||
| 13839899-C-T | 11719193-C-T | FGC82903 | *** | |||||
| 13870105-A-G | 11749399-A-G | BY91752 | *** | |||||
| 28785789-A-G | 26639642-A-G | *** | ||||||
| 13827525-AGTCAG-A | 11706819-AGTCAG-A | *** | ||||||
| 13138100-T-C | 10627586-T-C | *** | ||||||
| 13458603-G-C,T | 11302927-G-C,T | *** | ||||||
| 13663789-A-T | 11508113-A-T | *** | ||||||
| 13663790-A-G | 11508114-A-G | *** | ||||||
| 13832413-C-G | 11711707-C-G | *** | ||||||
| 13853792-T-C | 11733086-T-C | *** | ||||||
| 13867782-C-T | 11747076-C-T | *** | ||||||
| 28799860-G-A | 26653713-G-A | FT45589 | *** | |||||
| 58912847-A-C | 56678024-T-G | BY50423 | *** | |||||
| 58977231-C-T | 56831084-C-T | *** | ||||||
| 13815513-T-G | 11694807-T-G | BY171836 | *** | |||||
| 13869593-A-T | 11748887-A-T | BY91737 | *** | |||||
| 22231646-G-C | 20069760-G-C | DYZ19 | *** | |||||
| 22231655-C-T | 20069769-C-T | BY3412 | DYZ19 | *** | ||||
| 58976512-C-T | 56830365-C-T | *** | ||||||
| 58976564-G-C | 56830417-G-C | *** | ||||||
| 13805334-C-G | 11684628-C-G | *** | ||||||
| 13852001-GGAATCAATTC-G | 11731295-GGAATCAATTC-G | *** | ||||||
| 10017741-T-C | 10180132-T-C | *** | ||||||
| 13661257-G-A | 11505581-G-A | *** | ||||||
| 13808125-C-G | 11687419-C-G | *** | ||||||
| 13808130-A-G | 11687424-A-G | *** | ||||||
| 13842127-C-G | 11721421-C-G | *** | ||||||
| 13827957-T-G | 11707251-T-G | *** | ||||||
| 13455110-T-G | 11299434-T-G | *** | ||||||
| 13472602-G-C | 11316926-G-C | *** | ||||||
| 13684776-A-G | 11529100-A-G | *** | ||||||
| 13705917-C-T | 11550241-C-T | BY36985 | *** | |||||
| 13831622-G-C | 11710916-G-C | *** | ||||||
| 28799838-G-T | 26653691-G-T | *** | ||||||
| 58980797-T-C | 56834650-T-C | *** | ||||||
| 9310539-CATAT-C | 9472930-CATAT-C | 17×AT | *** | |||||
| 13661960-G-A | 11506284-G-A | BY54290 | *** | |||||
| 13662113-G-C | 11506437-G-C | *** | ||||||
| 13704248-C-G | 11548572-C-G | BY39979 | *** | |||||
| 13705919-A-G | 11550243-A-G | *** | ||||||
| 13842900-C-A | 11722194-C-A | *** | ||||||
| 22276338-C-T | 20114452-C-T | DYZ19 | *** | |||||
| 13447742-T-C | 11292066-T-C | *** | ||||||
| 13652096-T-A | 11496420-T-A | *** | ||||||
| 13652107-A-T | 11496431-A-T | *** | ||||||
| 13689209-TCAAAA-T,TGGAAT | 11533533-TCAAAA-T,TGGAAT | *** | ||||||
| 13810110-G-A | 11689404-G-A | 5×ATGGA | *** | |||||
| 13857970-C-G | 11737264-C-G | *** | ||||||
| 13447736-T-A | 11292060-T-A | *** | ||||||
| 13805339-A-G | 11684633-A-G | *** | ||||||
| 13805360-T-A | 11684654-T-A | *** | ||||||
| 13857986-G-A | 11737280-G-A | FT104834 | *** | |||||
| 13819067-G-T | 11698361-G-T | *** | ||||||
| 13824912-T-A | 11704206-T-A | *** | ||||||
| 9968251-C-T | 10130642-C-T | BY46993 | *** | |||||
| 13454121-G-C | 11298445-G-C | 4×CATTC | *** | |||||
| 13458549-C-T | 11302873-C-T | *** | ||||||
| 13458998-G-T | 11303322-G-T | *** | ||||||
| 13651494-T-G | 11495818-T-G | *** | ||||||
| 13808095-T-G | 11687389-T-G | *** | ||||||
| 13820073-C-T | 11699367-C-T | BY90517 | *** | |||||
| 13839892-C-A | 11719186-C-A | *** | ||||||
| 13852996-A-T | 11732290-A-T | *** | ||||||
| 13852997-T-G | 11732291-T-G | *** | ||||||
| 13855130-T-C | 11734424-T-C | *** | ||||||
| 13855135-T-A | 11734429-T-A | *** | ||||||
| 13865909-C-G | 11745203-C-G | *** | ||||||
| 28798947-G-A | 26652800-G-A | *** | ||||||
| 58912786-A-T | 56678085-T-A | *** | ||||||
| 58912787-G-C | 56678084-C-G | *** | ||||||
| 58912797-G-C | 56678074-C-G | *** | ||||||
| 58977119-A-C | 56830972-A-C | *** | ||||||
| 13470772-T-C | 11315096-T-C | *** | ||||||
| 13800617-T-G | 11679911-T-G | *** | ||||||
| 13817292-T-G | 11696586-T-G | *** | ||||||
| 13863529-T-G | 11742823-T-G | *** | ||||||
| 13137444-C-T | 10626930-C-T | *** | ||||||
| 13137989-C-T | 10627475-C-T | *** | ||||||
| 13446920-A-C | 11291244-A-C | *** | ||||||
| 13652075-A-T | 11496399-A-T | *** | ||||||
| 13703629-T-A | 11547953-T-A | *** | ||||||
| 13799056-G-T | 11678350-G-T | *** | ||||||
| 13799061-G-A | 11678355-G-A | *** | ||||||
| 13799075-G-C | 11678369-G-C | *** | ||||||
| 13799076-G-T | 11678370-G-T | *** | ||||||
| 13826032-A-G | 11705326-A-G | *** | ||||||
| 13832411-C-A | 11711705-C-A | *** | ||||||
| 13832456-T-A,G | 11711750-T-A,G | *** | ||||||
| 13842553-C-G | 11721847-C-G | *** | ||||||
| 13843827-A-G | 11723121-A-G | *** | ||||||
| 13855471-T-G | 11734765-T-G | BY33739 | *** | |||||
| 13855475-A-T | 11734769-A-T | *** | ||||||
| 13855490-A-T | 11734784-A-T | *** | ||||||
| 13857583-A-G | 11736877-A-G | *** | ||||||
| 13858045-C-G | 11737339-C-G | *** | ||||||
| 13870104-C-T | 11749398-C-T | *** | ||||||
| 28785821-T-G | 26639674-T-G | *** | ||||||
| 28785841-C-G | 26639694-C-G | *** | ||||||
| 28799118-A-G | 26652971-A-G | *** | ||||||
| 28799138-C-G | 26652991-C-G | *** | ||||||
| 28801626-C-G | 26655479-C-G | *** | ||||||
| 28801627-A-G | 26655480-A-G | *** | ||||||
| 58976557-C-T | 56830410-C-T | *** | ||||||
| 13817967-G-C | 11697261-G-C | *** | ||||||
| 13842237-A-G | 11721531-A-G | *** | ||||||
| 13855429-C-A | 11734723-C-A | *** | ||||||
| 13478868-A-C | 11323192-A-C | *** | ||||||
| 13801477-T-A | 11680771-T-A | Y302 Z6294 | *** | |||||
| 22258599-A-G | 20096713-A-G | BY20911 | DYZ19 | *** | ||||
| 13866952-C-A | 11746246-C-A | *** | ||||||
| 13458980-G-C | 11303304-G-C | *** | ||||||
| 13664783-T-G | 11509107-T-G | *** | ||||||
| 13684771-A-G | 11529095-A-G | *** | ||||||
| 13705856-T-G | 11550180-T-G | *** | ||||||
| 13705858-G-C | 11550182-G-C | FT135168 | *** | |||||
| 13705861-G-T | 11550185-G-T | *** | ||||||
| 13860015-G-C | 11739309-G-C | *** | ||||||
| 13860017-C-G | 11739311-C-G | *** | ||||||
| 13860020-G-GACACA | 11739314-G-GACACA | *** | ||||||
| 13452688-C-T | 11297012-C-T | *** | ||||||
| 13838603-C-A | 11717897-C-A | *** | ||||||
| 13855431-C-G | 11734725-C-G | *** | ||||||
| 13852238-A-G | 11731532-A-G | *** | ||||||
| 13852239-A-G | 11731533-A-G | *** | ||||||
| 13830375-A-G | 11709669-A-G | *** | ||||||
| 13868325-C-G | 11747619-C-G | *** | ||||||
| 28786069-C-T | 26639922-C-T | *** | ||||||
| 28798845-A-G | 26652698-A-G | *** | ||||||
| 28798957-G-A | 26652810-G-A | *** | ||||||
| 28801642-A-G | 26655495-A-G | *** | ||||||
| 13821003-T-C | 11700297-T-C | *** | ||||||
| 13833809-C-G | 11713103-C-G | *** | ||||||
| 13453378-C-G | 11297702-C-G | *** | ||||||
| 13457512-G-C | 11301836-G-C | *** | ||||||
| 13139501-T-A | 10628987-T-A | *** | ||||||
| 13658701-A-G | 11503025-A-G | *** | ||||||
| 13658708-C-A | 11503032-C-A | *** | ||||||
| 13803185-C-T | 11682479-C-T | *** | ||||||
| 13821011-G-A | 11700305-G-A | *** | ||||||
| 13824917-T-C | 11704211-T-C | *** | ||||||
| 13855411-C-G | 11734705-C-G | *** | ||||||
| 13855421-A-G | 11734715-A-G | *** | ||||||
| 13855446-C-G | 11734740-C-G | *** | ||||||
| 58975714-G-T | 56829567-G-T | *** | ||||||
| 13680693-A-G | 11525017-A-G | *** | ||||||
| 13801423-C-T | 11680717-C-T | *** | ||||||
| 13855445-A-T | 11734739-A-T | *** | ||||||
| 13830079-C-G | 11709373-C-G | *** | ||||||
| 58882829-A-T | 56708042-T-A | *** | ||||||
| 58882865-C-T | 56708006-G-A | *** | ||||||
| 58912832-T-C | 56678039-A-G | *** | ||||||
| 58977206-C-T | 56831059-C-T | *** | ||||||
| 13852255-T-C | 11731549-T-C | *** | ||||||
| 13800659-C-G | 11679953-C-G | *** | ||||||
| 13803184-T-C | 11682478-T-C | *** | ||||||
| 13818696-T-A | 11697990-T-A | *** | ||||||
| 13826220-C-T | 11705514-C-T | *** | ||||||
| 13835396-C-A | 11714690-C-A | *** | ||||||
| 22241213-G-C | 20079327-G-C | DYZ19 | *** | |||||
| 28784817-G-A | 26638670-G-A | *** | ||||||
| 28799865-G-A | 26653718-G-A | *** | ||||||
| 13855405-A-T | 11734699-A-T | *** | ||||||
| 13858065-A-G | 11737359-A-G | *** | ||||||
| 13842255-C-A | 11721549-C-A | *** | ||||||
| 13842257-C-G | 11721551-C-G | *** | ||||||
| 13653859-G-T | 11498183-G-T | *** | ||||||
| 13653871-A-G | 11498195-A-G | *** | ||||||
| 13658694-C-A | 11503018-C-A | *** | ||||||
| 13658699-G-A | 11503023-G-A | *** | ||||||
| 13830092-C-A | 11709386-C-A | *** | ||||||
| 13852605-G-T | 11731899-G-T | *** | ||||||
| 13853215-C-A | 11732509-C-A | S14929 | *** | |||||
| 22237052-G-A | 20075166-G-A | A3939 | DYZ19 | *** | ||||
| 22295446-A-C | 20133560-A-C | BY1951 | DYZ19 | *** | ||||
| 58983165-C-T | 56837018-C-T | *** | ||||||
| 13143778-TCCACTGCACTGCACA-T | 10633264-TCCACTGCACTGCACA-T | *** | ||||||
| 13833770-T-A | 11713064-T-A | *** | ||||||
| 13855127-G-A | 11734421-G-A | *** | ||||||
| 13828549-A-G | 11707843-A-G | *** | ||||||
| 13855396-C-G | 11734690-C-G | *** | ||||||
| 13860162-G-A | 11739456-G-A | *** | ||||||
| 22300724-A-C,T | 20138838-A-C,T | DYZ19 | *** | |||||
| 22301910-A-G | 20140024-A-G | DYZ19 | *** | |||||
| 58975293-G-T | 56829146-G-T | *** | ||||||
| 13805486-C-G | 11684780-C-G | *** | ||||||
| 13852747-A-G | 11732041-A-G | *** | ||||||
| 13852753-A-G | 11732047-A-G | *** | ||||||
| 28799136-T-A | 26652989-T-A | *** | ||||||
| 58882934-T-A | 56707937-A-T | *** | ||||||
| 13842241-A-T | 11721535-A-T | *** | ||||||
| 13818038-C-A,G | 11697332-C-A,G | *** | ||||||
| 13652091-T-A | 11496415-T-A | *** | ||||||
| 58979100-G-C | 56832953-G-C | *** | ||||||
| 22239076-C-A | 20077190-C-A | DYZ19 | *** | |||||
| 13451910-A-C,T | 11296234-A-C,T | *** | ||||||
| 28793433-C-G | 26647286-C-G | *** | ||||||
| 7651728-T-C | 7783687-T-C | *** | ||||||
| 9738704-A-T | 9901095-A-T | IR3_Prx | *** | |||||
| 9738721-T-C | 9901112-T-C | FT20498 | IR3_Prx | *** | ||||
| 9738722-G-C | 9901113-G-C | FT20499 | IR3_Prx | *** | ||||
| 9738861-C-G | 9901252-C-G | FT104782 | IR3_Prx | *** | ||||
| 9746128-G-T | 9908519-G-T | *** | ||||||
| 9746133-T-C | 9908524-T-C | *** | ||||||
| 9746310-C-G | 9908701-C-G | *** | ||||||
| 9746377-A-T | 9908768-A-T | *** | ||||||
| 10008591-G-C | 10170982-G-C | *** | ||||||
| 13137974-C-A | 10627460-C-A | *** | ||||||
| 13141828-C-T | 10631314-C-T | *** | ||||||
| 13143005-A-T | 10632491-A-T | *** | ||||||
| 13143019-C-T | 10632505-C-T | *** | ||||||
| 13195200-T-A | 11039524-T-A | *** | ||||||
| 13254790-C-G | 11099114-C-G | *** | ||||||
| 13452658-T-C | 11296982-T-C | *** | ||||||
| 13456376-C-T | 11300700-C-T | *** | ||||||
| 13456378-CGGTT-C | 11300702-CGGTT-C | *** | ||||||
| 13458551-G-A | 11302875-G-A | BY85533 | *** | |||||
| 13469150-C-A | 11313474-C-A | BY30133 | *** | |||||
| 13478774-C-T | 11323098-C-T | *** | ||||||
| 13659320-T-C | 11503644-T-C | *** | ||||||
| 13662093-TGGAA-T | 11506417-TGGAA-T | *** | ||||||
| 13666139-G-A | 11510463-G-A | *** | ||||||
| 13666149-G-A | 11510473-G-A | *** | ||||||
| 13666168-G-A | 11510492-G-A | *** | ||||||
| 13666178-T-A | 11510502-T-A | *** | ||||||
| 13668466-T-G | 11512790-T-G | *** | ||||||
| 13668526-A-G | 11512850-A-G | *** | ||||||
| 13668531-C-G | 11512855-C-G | *** | ||||||
| 13676580-G-T | 11520904-G-T | *** | ||||||
| 13676613-A-C | 11520937-A-C | *** | ||||||
| 13680676-G-C | 11525000-G-C | *** | ||||||
| 13680678-A-G | 11525002-A-G | *** | ||||||
| 13680684-T-G | 11525008-T-G | *** | ||||||
| 13680698-C-A | 11525022-C-A | *** | ||||||
| 13680706-A-C | 11525030-A-C | *** | ||||||
| 13680741-G-C | 11525065-G-C | *** | ||||||
| 13680748-A-G | 11525072-A-G | *** | ||||||
| 13680831-G-C | 11525155-G-C | *** | ||||||
| 13680910-G-GGAACA | 11525234-G-GGAACA | *** | ||||||
| 13680911-G-A | 11525235-G-A | *** | ||||||
| 13681046-G-A,C | 11525370-G-A,C | *** | ||||||
| 13683086-C-T | 11527410-C-T | BY54322 | *** | |||||
| 13683088-A-G | 11527412-A-G | FGC24504 | *** | |||||
| 13683094-C-A | 11527418-C-A | *** | ||||||
| 13683111-A-T | 11527435-A-T | *** | ||||||
| 13683114-G-A | 11527438-G-A | *** | ||||||
| 13683135-G-A | 11527459-G-A | *** | ||||||
| 13684353-A-G | 11528677-A-G | *** | ||||||
| 13689145-C-G | 11533469-C-G | FT448531 | *** | |||||
| 13699962-A-T | 11544286-A-T | FGC81289 | *** | |||||
| 13705849-G-T | 11550173-G-T | *** | ||||||
| 13705850-A-C | 11550174-A-C | *** | ||||||
| 13711048-T-A | 11555372-T-A | *** | ||||||
| 13799044-A-C | 11678338-A-C | *** | ||||||
| 13800325-C-T | 11679619-C-T | *** | ||||||
| 13800625-G-C | 11679919-G-C | *** | ||||||
| 13800626-G-A | 11679920-G-A | FT65549 | *** | |||||
| 13800658-G-T | 11679952-G-T | *** | ||||||
| 13800660-T-A | 11679954-T-A | *** | ||||||
| 13800668-C-A | 11679962-C-A | A3855 | *** | |||||
| 13800681-A-C | 11679975-A-C | *** | ||||||
| 13801547-T-A,C | 11680841-T-A,C | *** | ||||||
| 13805374-A-C | 11684668-A-C | *** | ||||||
| 13805500-C-T | 11684794-C-T | *** | ||||||
| 13810801-A-G | 11690095-A-G | *** | ||||||
| 13813176-C-T | 11692470-C-T | Y137378 FGC75318 | *** | |||||
| 13814888-C-G | 11694182-C-G | *** | ||||||
| 13814897-T-G | 11694191-T-G | *** | ||||||
| 13814918-T-A | 11694212-T-A | *** | ||||||
| 13818720-A-T | 11698014-A-T | *** | ||||||
| 13821116-A-C | 11700410-A-C | *** | ||||||
| 13821248-A-C | 11700542-A-C | *** | ||||||
| 13826241-C-G | 11705535-C-G | *** | ||||||
| 13826252-A-G | 11705546-A-G | *** | ||||||
| 13828619-C-A | 11707913-C-A | *** | ||||||
| 13828633-C-A | 11707927-C-A | *** | ||||||
| 13830149-C-G | 11709443-C-G | *** | ||||||
| 13836445-C-A | 11715739-C-A | FGC47176 | *** | |||||
| 13843698-T-C | 11722992-T-C | *** | ||||||
| 13844378-C-T | 11723672-C-T | *** | ||||||
| 13844385-C-G | 11723679-C-G | S14819 | *** | |||||
| 13847371-T-A | 11726665-T-A | *** | ||||||
| 13847396-C-A | 11726690-C-A | *** | ||||||
| 13849247-T-G | 11728541-T-G | FGC70769 | *** | |||||
| 13850216-A-C,G | 11729510-A-C,G | *** | ||||||
| 13852139-C-A | 11731433-C-A | Y89810 BY29916 | *** | |||||
| 13852599-G-A | 11731893-G-A | PF629 | *** | |||||
| 13852980-C-A | 11732274-C-A | *** | ||||||
| 13855437-C-G | 11734731-C-G | *** | ||||||
| 13855527-A-G | 11734821-A-G | *** | ||||||
| 13856412-A-C,G | 11735706-A-C,G | *** | ||||||
| 13856620-C-A | 11735914-C-A | *** | ||||||
| 13856661-T-C | 11735955-T-C | *** | ||||||
| 13857993-A-T | 11737287-A-T | *** | ||||||
| 13858024-T-A | 11737318-T-A | *** | ||||||
| 13858026-G-T | 11737320-G-T | *** | ||||||
| 13858030-G-A | 11737324-G-A | *** | ||||||
| 13858044-T-A | 11737338-T-A | *** | ||||||
| 13858060-G-T | 11737354-G-T | *** | ||||||
| 13861671-T-A | 11740965-T-A | *** | ||||||
| 13862166-GAACTT-G,GAACAG | 11741460-GAACTT-G,GAACAG | *** | ||||||
| 13863768-A-G | 11743062-A-G | *** | ||||||
| 13865754-C-G,T | 11745048-C-G,T | *** | ||||||
| 13868375-G-A | 11747669-G-A | BY161670 | *** | |||||
| 13868456-GAATCGACCCAAAAGT-G,GAATGGACCCAAATGT | 11747750-GAATCGACCCAAAAGT-G,GAATGGACCCAAATGT | *** | ||||||
| 13868496-A-G | 11747790-A-G | *** | ||||||
| 13868500-A-G | 11747794-A-G | *** | ||||||
| 13868523-C-A | 11747817-C-A | *** | ||||||
| 13869288-T-C | 11748582-T-C | *** | ||||||
| 19748385-C-A | 17636505-C-A | P5_Prx | *** | |||||
| 19937680-A-C | 17825800-A-C | P5_Prx | *** | |||||
| 19958285-CT-C | 17846405-CT-C | P5_Prx | 10×T | *** | ||||
| 22223008-A-G | 20061122-A-G | DYZ19 | *** | |||||
| 22223072-A-G | 20061186-A-G | DYZ19 | *** | |||||
| 22223244-A-C | 20061358-A-C | DYZ19 | *** | |||||
| 22223276-T-G | 20061390-T-G | DYZ19 | *** | |||||
| 22223279-G-C | 20061393-G-C | DYZ19 | *** | |||||
| 22226052-A-T | 20064166-A-T | DYZ19 | *** | |||||
| 22226838-A-T | 20064952-A-T | DYZ19 | *** | |||||
| 22228192-T-G | 20066306-T-G | DYZ19 | *** | |||||
| 22232854-T-C | 20070968-T-C | DYZ19 | *** | |||||
| 22232943-A-G | 20071057-A-G | FGC27613 | DYZ19 | *** | ||||
| 22232957-T-C | 20071071-T-C | BY22800 | DYZ19 | *** | ||||
| 22233479-G-C | 20071593-G-C | DYZ19 | *** | |||||
| 22233539-G-A | 20071653-G-A | BY5951 | DYZ19 | *** | ||||
| 22236965-C-A | 20075079-C-A | DYZ19 | *** | |||||
| 22236968-C-G | 20075082-C-G | DYZ19 | *** | |||||
| 22237084-A-C | 20075198-A-C | DYZ19 | *** | |||||
| 22237286-T-C | 20075400-T-C | S3075 | DYZ19 | *** | ||||
| 22238249-C-T | 20076363-C-T | BY171955 | DYZ19 | *** | ||||
| 22244310-C-A | 20082424-C-A | DYZ19 | *** | |||||
| 22247226-G-A | 20085340-G-A | DYZ19 | *** | |||||
| 22283567-A-G | 20121681-A-G | DYZ19 | *** | |||||
| 22296076-G-A | 20134190-G-A | DYZ19 | *** | |||||
| 22304511-G-C | 20142625-G-C | DYZ19 | *** | |||||
| 22304514-A-T | 20142628-A-T | DYZ19 | *** | |||||
| 22304536-T-C | 20142650-T-C | DYZ19 | *** | |||||
| 22337997-T-G | 20176111-T-G | DYZ19 | *** | |||||
| 22435609-A-G | 20273723-A-G | DYZ19 | *** | |||||
| 22481411-A-G | 20319525-A-G | DYZ19 | *** | |||||
| 23899418-G-C | 21737532-G-C | *** | ||||||
| 23899420-G-T | 21737534-G-T | *** | ||||||
| 24034542-G-C | 21888395-G-C | *** | ||||||
| 24283114-C-G | 22136967-C-G | P3_t1 | *** | |||||
| 24990417-C-A | 22844270-C-A | g1 | *** | |||||
| 25259693-C-T | 23113546-C-T | P2_r1 | *** | |||||
| 25309807-G-A | 23163660-G-A | P2_r1 | *** | |||||
| 25349781-T-TA | 23203634-T-TA | P2_r1 | *** | |||||
| 25379339-C-T | 23233192-C-T | P2_r2 | *** | |||||
| 26217196-C-T | 24071049-C-T | P1_Y1 | *** | |||||
| 28785827-A-G | 26639680-A-G | *** | ||||||
| 28785831-C-G | 26639684-C-G | *** | ||||||
| 28786045-G-T | 26639898-G-T | *** | ||||||
| 28786591-A-G | 26640444-A-G | *** | ||||||
| 28793458-G-A | 26647311-G-A | *** | ||||||
| 28793459-T-C | 26647312-T-C | *** | ||||||
| 28798942-T-A | 26652795-T-A | *** | ||||||
| 28799226-A-G | 26653079-A-G | *** | ||||||
| 58855994-C-T | 56734877-G-A | *** | ||||||
| 58912817-T-C | 56678054-A-G | *** | ||||||
| 58982285-C-T | 56836138-C-T | *** | ||||||
| 58982315-C-T | 56836168-C-T | *** | ||||||
| 58982827-G-T | 56836680-G-T | *** | ||||||
| 17281991-TGATA-T | 15170111-TGATA-T | 7×GATA | *** | |||||
| 10019370-A-AC | 10181761-A-AC | *** | ||||||
| 13819954-GGAATT-G | 11699248-GGAATT-G | *** | ||||||
| 13660535-GGAATC-G | 11504859-GGAATC-G | *** | ||||||
| 13456091-A-C,T | 11300415-A-C,T | *** | ||||||
| 13680778-C-G,T | 11525102-C-G,T | 4×TGGAA | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.