1k Genomes

1kG: HG02982
MDKA Birth: Gambia
Gambian in Western Division, The Gambia

Tree Position

A0-T-YP2191 > CTS2809/L991[A0 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STR1kG
HG02982
hg19:Y:6108926-G-A hg38:Y:6240885-G-A FGC9595FGC9591 ZP54 +
hg19:Y:6847842-G-C hg38:Y:6979801-G-C V150 YY+
hg19:Y:13821987-C-T hg38:Y:11701281-C-T BY47120 DYZ17 +
hg19:Y:14096805-C-T hg38:Y:11976099-C-T PR4692BY4105 YY+
hg19:Y:8354783-G-A hg38:Y:8486742-G-A A1369 YY+
hg19:Y:6794834-C-T hg38:Y:6926793-C-T BY61350 YY+
hg19:Y:14722624-G-T hg38:Y:12610692-G-T YY+
hg19:Y:16547464-T-A hg38:Y:14435584-T-A BY48819 FT63365 YY+
hg19:Y:17244528-C-T hg38:Y:15132648-C-T FGC31173 Y+
hg19:Y:21419177-C-T hg38:Y:19257291-C-T FT331562 Y+
hg19:Y:28507965-C-T hg38:Y:26361818-C-T FT332970 +
hg19:Y:3147666-C-T hg38:Y:3279625-C-T Z8497 +
hg19:Y:3859766-C-G hg38:Y:3991725-C-G FT132587 +
hg19:Y:4914241-A-G hg38:Y:5046200-A-G +
hg19:Y:9955707-G-A hg38:Y:10118098-G-A FT399510 Y+
hg19:Y:22179271-G-A hg38:Y:20017385-G-A PH5071 YY+
hg19:Y:22443940-G-A hg38:Y:20282054-G-A BY50091 DYZ19 +
hg19:Y:22480172-C-T hg38:Y:20318286-C-T BY47368 DYZ19 +
hg19:Y:22271582-A-T hg38:Y:20109696-A-T BY215214 DYZ19 +
hg19:Y:6868881-C-T hg38:Y:7000840-C-T V153 YY+
hg19:Y:2670196-A-G hg38:Y:2802155-A-G FT132290 Y+
hg19:Y:2673284-T-G hg38:Y:2805243-T-G FT315350 Y+
hg19:Y:2717950-T-A hg38:Y:2849909-T-A FTA5788 YY+
hg19:Y:2813732-G-T hg38:Y:2945691-G-T YY+
hg19:Y:2820406-A-T hg38:Y:2952365-A-T FT315390 YY+
hg19:Y:2900664-G-A hg38:Y:3032623-G-A FT294599 Y+
hg19:Y:2943690-G-A hg38:Y:3075649-G-A FT315501 +
hg19:Y:2950432-T-G hg38:Y:3082391-T-G FT132334 +
hg19:Y:3039094-A-G hg38:Y:3171053-A-G FT132360 +
hg19:Y:3042903-T-C hg38:Y:3174862-T-C +
hg19:Y:3056306-G-A hg38:Y:3188265-G-A FT132362 +
hg19:Y:3063408-C-T hg38:Y:3195367-C-T FT315925 +
hg19:Y:3065914-A-G hg38:Y:3197873-A-G FT132365 +
hg19:Y:3070183-A-T hg38:Y:3202142-A-T +
hg19:Y:3093355-C-T hg38:Y:3225314-C-T FT132370 +
hg19:Y:3128206-G-A hg38:Y:3260165-G-A FT316182 +
hg19:Y:3211118-T-C hg38:Y:3343077-T-C FT132395 +
hg19:Y:3309265-C-T hg38:Y:3441224-C-T FT316786 +
hg19:Y:3324261-C-T hg38:Y:3456220-C-T FT132432 +
hg19:Y:3332812-A-G hg38:Y:3464771-A-G FT316844 +
hg19:Y:3391070-C-T hg38:Y:3523029-C-T FT132443 +
hg19:Y:3422179-C-T hg38:Y:3554138-C-T FT132456 +
hg19:Y:3437028-G-C hg38:Y:3568987-G-C FT317241 +
hg19:Y:3463474-C-T hg38:Y:3595433-C-T FT132468 +
hg19:Y:3463550-C-T hg38:Y:3595509-C-T FT38420 +
hg19:Y:3559910-A-G hg38:Y:3691869-A-G Z8520 +
hg19:Y:3654512-C-T hg38:Y:3786471-C-T FT135646 +
hg19:Y:3662716-C-T hg38:Y:3794675-C-T FT132516 +
hg19:Y:3674629-A-G hg38:Y:3806588-A-G FT318095 +
hg19:Y:3758431-T-C hg38:Y:3890390-T-C FT132551 +
hg19:Y:3808354-T-A hg38:Y:3940313-T-A FT132572 +
hg19:Y:3817481-A-G hg38:Y:3949440-A-G Z8541 +
hg19:Y:3981856-C-A hg38:Y:4113815-C-A FT132625 +
hg19:Y:3998039-T-A hg38:Y:4129998-T-A FT132631 +
hg19:Y:4119543-T-G hg38:Y:4251502-T-G FT319576 +
hg19:Y:4129323-T-A hg38:Y:4261282-T-A FT319611 +
hg19:Y:4148833-G-C hg38:Y:4280792-G-C Z8560 +
hg19:Y:4154038-T-C hg38:Y:4285997-T-C FT319707 +
hg19:Y:4164530-C-G hg38:Y:4296489-C-G FT319738 +
hg19:Y:4166852-G-A hg38:Y:4298811-G-A FT319744 +
hg19:Y:4186147-T-C hg38:Y:4318106-T-C FT132677 +
hg19:Y:4187795-G-C hg38:Y:4319754-G-C FT132678 +
hg19:Y:4189465-A-G hg38:Y:4321424-A-G FT80435 +
hg19:Y:4229166-G-C hg38:Y:4361125-G-C FT132689 +
hg19:Y:4255992-T-C hg38:Y:4387951-T-C FT132697 +
hg19:Y:4318979-G-C hg38:Y:4450938-G-C FT82784 +
hg19:Y:4374165-A-G hg38:Y:4506124-A-G +
hg19:Y:4454594-T-C hg38:Y:4586553-T-C FT132756 +
hg19:Y:4532834-T-A hg38:Y:4664793-T-A +
hg19:Y:4710388-A-G hg38:Y:4842347-A-G FT132845 +
hg19:Y:4710987-A-G hg38:Y:4842946-A-G FT132847 +
hg19:Y:4733557-G-A hg38:Y:4865516-G-A FT132853 +
hg19:Y:4740361-A-G hg38:Y:4872320-A-G +
hg19:Y:4806334-C-T hg38:Y:4938293-C-T FT321784 +
hg19:Y:4813981-G-A hg38:Y:4945940-G-A FT132868 +
hg19:Y:4838026-C-G hg38:Y:4969985-C-G FT132875 +
hg19:Y:4852432-T-G hg38:Y:4984391-T-G FT132878 +
hg19:Y:4871136-C-G hg38:Y:5003095-C-G FT132885 +
hg19:Y:4887352-C-T hg38:Y:5019311-C-T FT39236 FT132887 +
hg19:Y:4887720-A-G hg38:Y:5019679-A-G FT322017 +
hg19:Y:4989622-C-A hg38:Y:5121581-C-A FT132902 +
hg19:Y:4993932-G-T hg38:Y:5125891-G-T FT132904 +
hg19:Y:5064083-G-A hg38:Y:5196042-G-A FT132921 +
hg19:Y:5088921-A-G hg38:Y:5220880-A-G FT322682 +
hg19:Y:5106295-T-C hg38:Y:5238254-T-C +
hg19:Y:5121934-G-A hg38:Y:5253893-G-A FGC8697 +
hg19:Y:5181468-A-G hg38:Y:5313427-A-G FT323008 +
hg19:Y:5185055-G-A hg38:Y:5317014-G-A FT132954 +
hg19:Y:5198492-T-G hg38:Y:5330451-T-G FT323057 +
hg19:Y:5269493-T-G hg38:Y:5401452-T-G FT323332 +
hg19:Y:5294598-G-A hg38:Y:5426557-G-A FT132985 +
hg19:Y:5312792-A-G hg38:Y:5444751-A-G FT132988 +
hg19:Y:5327223-G-C hg38:Y:5459182-G-C FT132992 +
hg19:Y:5332209-C-T hg38:Y:5464168-C-T FT323569 +
hg19:Y:5371065-C-T hg38:Y:5503024-C-T FT133005 +
hg19:Y:5403879-A-T hg38:Y:5535838-A-T FT133017 +
hg19:Y:5439595-T-C hg38:Y:5571554-T-C FT133024 +
hg19:Y:5485780-C-T hg38:Y:5617739-C-T FT324062 +
hg19:Y:5488903-A-C hg38:Y:5620862-A-C FT324069 +
hg19:Y:5503614-G-C hg38:Y:5635573-G-C FT133041 +
hg19:Y:5524403-G-C hg38:Y:5656362-G-C FT324189 +
hg19:Y:5527282-G-A hg38:Y:5659241-G-A FT133048 +
hg19:Y:5582333-G-A hg38:Y:5714292-G-A FT133069 +
hg19:Y:5589783-A-C hg38:Y:5721742-A-C Z8648 +
hg19:Y:5605649-C-T hg38:Y:5737608-C-T FT133074 +
hg19:Y:5605883-A-G hg38:Y:5737842-A-G FT324464 +
hg19:Y:5612160-T-C hg38:Y:5744119-T-C FT133081 +
hg19:Y:5641096-C-T hg38:Y:5773055-C-T FT133089 +
hg19:Y:5719389-A-G hg38:Y:5851348-A-G FT133114 +
hg19:Y:5815523-G-C hg38:Y:5947482-G-C Z8663 +
hg19:Y:5816412-T-C hg38:Y:5948371-T-C FT133148 +
hg19:Y:5833090-C-T hg38:Y:5965049-C-T FT133153 +
hg19:Y:5850316-A-G hg38:Y:5982275-A-G FGC69807 +
hg19:Y:5879223-A-G hg38:Y:6011182-A-G FT133166 +
hg19:Y:5903168-A-G hg38:Y:6035127-A-G +
hg19:Y:5906432-T-C hg38:Y:6038391-T-C FT133175 +
hg19:Y:5931884-T-A hg38:Y:6063843-T-A FT325539 +
hg19:Y:5932958-G-T hg38:Y:6064917-G-T FT133183 +
hg19:Y:5959479-G-A hg38:Y:6091438-G-A FT133197 +
hg19:Y:6056970-A-G hg38:Y:6188929-A-G FT325993 +
hg19:Y:6078709-C-A hg38:Y:6210668-C-A FT326071 +
hg19:Y:6086524-A-T hg38:Y:6218483-A-T FT133237 4×AAAC+
hg19:Y:6098903-T-C hg38:Y:6230862-T-C FT133244 +
hg19:Y:6100865-A-C hg38:Y:6232824-A-C Z8688 +
hg19:Y:6115354-T-C hg38:Y:6247313-T-C +
hg19:Y:6140410-C-T hg38:Y:6272369-C-T BY46914 IR3_Dst +
hg19:Y:6154305-T-A hg38:Y:6286264-T-A BY59348 IR3_Dst +
hg19:Y:6423023-A-G hg38:Y:6554982-A-G FT133270 +
hg19:Y:6455048-A-C hg38:Y:6587007-A-C FT133279 +
hg19:Y:6493928-G-A hg38:Y:6625887-G-A FT133289 +
hg19:Y:6505256-A-T hg38:Y:6637215-A-T FT133290 +
hg19:Y:6611741-A-T hg38:Y:6743700-A-T Z8704 +
hg19:Y:6618995-G-A hg38:Y:6750954-G-A FT133315 Y+
hg19:Y:6683637-A-T hg38:Y:6815596-A-T FT327023 Y+
hg19:Y:6751144-C-G hg38:Y:6883103-C-G FT327039 Y+
hg19:Y:6752471-A-G hg38:Y:6884430-A-G YY+
hg19:Y:6829701-A-G hg38:Y:6961660-A-G FT133338 Y+
hg19:Y:6877314-G-A hg38:Y:7009273-G-A V158 YY+
hg19:Y:6931670-T-C hg38:Y:7063629-T-C L1073 YY+
hg19:Y:6932829-G-A hg38:Y:7064788-G-A V159 YY+
hg19:Y:6936753-G-A hg38:Y:7068712-G-A PH321 YY+
hg19:Y:6968743-A-T hg38:Y:7100702-A-T PH352 YY+
hg19:Y:6992144-G-A hg38:Y:7124103-G-A PH376 YY+
hg19:Y:6994592-C-G hg38:Y:7126551-C-G BY46719 YY+
hg19:Y:7003832-T-G hg38:Y:7135791-T-G FTA5806 Y+
hg19:Y:7027584-G-T hg38:Y:7159543-G-T FTC531 Y+
hg19:Y:7038092-G-C hg38:Y:7170051-G-C BY48122 YY+
hg19:Y:7041056-C-A hg38:Y:7173015-C-A FTA5809 Y+
hg19:Y:7059995-A-G hg38:Y:7191954-A-G FT327132 Y+
hg19:Y:7105582-G-T hg38:Y:7237541-G-T PH429 YY+
hg19:Y:7150738-A-G hg38:Y:7282697-A-G PH461 YY+
hg19:Y:7263187-C-T hg38:Y:7395146-C-T BY46928 YY+
hg19:Y:7267116-G-A hg38:Y:7399075-G-A FT327216 YY+
hg19:Y:7289319-C-T hg38:Y:7421278-C-T Y45863 YY+
hg19:Y:7303595-G-C hg38:Y:7435554-G-C FT327227 Y+
hg19:Y:7308774-G-T hg38:Y:7440733-G-T PH592 YY+
hg19:Y:7313631-G-A hg38:Y:7445590-G-A YY+
hg19:Y:7343600-T-C hg38:Y:7475559-T-C FT327248 Y+
hg19:Y:7380237-C-T hg38:Y:7512196-C-T FT133425 Y+
hg19:Y:7394396-G-A hg38:Y:7526355-G-A Y+
hg19:Y:7400650-A-G hg38:Y:7532609-A-G BY45872 YY+
hg19:Y:7404807-T-G hg38:Y:7536766-T-G BY49419 YY+
hg19:Y:7433187-A-C hg38:Y:7565146-A-C PH657 Y+
hg19:Y:7583448-C-A hg38:Y:7715407-C-A L987 YY+
hg19:Y:7676576-G-T hg38:Y:7808535-G-T FT327327 YY+
hg19:Y:7702166-G-A hg38:Y:7834125-G-A YY+
hg19:Y:7708730-A-G hg38:Y:7840689-A-G BY67072 YY+
hg19:Y:7716836-T-G hg38:Y:7848795-T-G FT141952 YY+
hg19:Y:7719558-A-G hg38:Y:7851517-A-G BY67104 YY+
hg19:Y:7755656-G-A hg38:Y:7887615-G-A FT327345 YY+
hg19:Y:7767068-G-A hg38:Y:7899027-G-A BY47519 YY+
hg19:Y:7778653-A-G hg38:Y:7910612-A-G FT327352 YY+
hg19:Y:7785509-C-T hg38:Y:7917468-C-T FT327356 YY+
hg19:Y:7788568-A-T hg38:Y:7920527-A-T BY46237 YY+
hg19:Y:7797005-A-G hg38:Y:7928964-A-G V1440 YY+
hg19:Y:7865442-C-T hg38:Y:7997401-C-T YY+
hg19:Y:7866416-C-T hg38:Y:7998375-C-T BY46940 YY+
hg19:Y:7912553-C-A hg38:Y:8044512-C-A FT327391 YY+
hg19:Y:7914072-C-T hg38:Y:8046031-C-T BY68723 YY+
hg19:Y:7916848-A-G hg38:Y:8048807-A-G FT327395 YY+
hg19:Y:7941652-G-A hg38:Y:8073611-G-A BY47524 YY+
hg19:Y:7994360-A-C hg38:Y:8126319-A-C FT133497 YY+
hg19:Y:8010231-C-A hg38:Y:8142190-C-A BY46453 YY+
hg19:Y:8143152-A-G hg38:Y:8275111-A-G BY45882 YY+
hg19:Y:8146059-A-G hg38:Y:8278018-A-G FT327465 YY+
hg19:Y:8161806-C-G hg38:Y:8293765-C-G V1681 YY+
hg19:Y:8172935-C-T hg38:Y:8304894-C-T BY46943 YY+
hg19:Y:8184735-A-C hg38:Y:8316694-A-C YY+
hg19:Y:8246889-T-C hg38:Y:8378848-T-C BY49041 YY+
hg19:Y:8255141-C-T hg38:Y:8387100-C-T BY46944 YY+
hg19:Y:8307989-C-T hg38:Y:8439948-C-T V1796 YY+
hg19:Y:8329742-C-T hg38:Y:8461701-C-T BY46945 YY+
hg19:Y:8344194-C-T hg38:Y:8476153-C-T BY71853 Y+
hg19:Y:8384386-G-A hg38:Y:8516345-G-A V1854 Y+
hg19:Y:8400419-T-C hg38:Y:8532378-T-C BY49044 YY+
hg19:Y:8407660-C-T hg38:Y:8539619-C-T BY46948 YY+
hg19:Y:8410624-C-T hg38:Y:8542583-C-T BY46949 YY+
hg19:Y:8411227-G-T hg38:Y:8543186-G-T BY48362 YY+
hg19:Y:8432962-G-A hg38:Y:8564921-G-A FGC14811 YY+
hg19:Y:8435204-G-A hg38:Y:8567163-G-A V1969 YY+
hg19:Y:8446040-T-A hg38:Y:8577999-T-A V1999 YY+
hg19:Y:8454612-T-G hg38:Y:8586571-T-G FT327555 YY+
hg19:Y:8463592-A-G hg38:Y:8595551-A-G FT327559 YY+
hg19:Y:8466078-C-G hg38:Y:8598037-C-G V2045 YY+
hg19:Y:8495110-A-C hg38:Y:8627069-A-C FTA5858 YY+
hg19:Y:8528783-G-A hg38:Y:8660742-G-A V2179 YY+
hg19:Y:8534524-T-C hg38:Y:8666483-T-C V2191 YY+
hg19:Y:8606954-C-T hg38:Y:8738913-C-T BY46959 YY+
hg19:Y:8647665-T-A hg38:Y:8779624-T-A BY48745 YY+
hg19:Y:8650105-A-C hg38:Y:8782064-A-C Z8885 YY+
hg19:Y:8650873-A-T hg38:Y:8782832-A-T BY46239 YY+
hg19:Y:8672892-G-A hg38:Y:8804851-G-A FT133605 YY+
hg19:Y:8742876-T-A hg38:Y:8874835-T-A BY48746 YY+
hg19:Y:8853589-T-G hg38:Y:8985548-T-G FT327703 YY+
hg19:Y:8861478-G-C hg38:Y:8993437-G-C BY48131 YY+
hg19:Y:8900205-C-T hg38:Y:9032164-C-T BY46968 Y+
hg19:Y:8911331-C-T hg38:Y:9043290-C-T BY46970 +
hg19:Y:8984207-G-A hg38:Y:9146598-G-A FT133650 +
hg19:Y:8999188-C-T hg38:Y:9161579-C-T BY46973 Y+
hg19:Y:9010953-A-G hg38:Y:9173344-A-G BY45898 Y+
hg19:Y:9071021-T-C hg38:Y:9233412-T-C BY49055 Y+
hg19:Y:9096166-C-A hg38:Y:9258557-C-A FT327821 Y+
hg19:Y:9108113-C-T hg38:Y:9270504-C-T BY78154 Y+
hg19:Y:9124308-C-A hg38:Y:9286699-C-A BY46461 Y+
hg19:Y:9124416-A-C hg38:Y:9286807-A-C BY45695 Y+
hg19:Y:9138052-C-A hg38:Y:9300443-C-A BY46463 Y+
hg19:Y:9145762-A-G hg38:Y:9308153-A-G BY45901 Y+
hg19:Y:9163530-G-C hg38:Y:9325921-G-C FT133685 +
hg19:Y:9163801-C-T hg38:Y:9326192-C-T FT327849 +
hg19:Y:9172304-C-A hg38:Y:9334695-C-A Y+
hg19:Y:9377734-T-G hg38:Y:9540125-T-G BY49425 Y+
hg19:Y:9384702-G-A hg38:Y:9547093-G-A BY47550 Y+
hg19:Y:9395842-C-A hg38:Y:9558233-C-A BY46465 YY+
hg19:Y:9411381-G-A hg38:Y:9573772-G-A FT327930 Y+
hg19:Y:9427112-G-C hg38:Y:9589503-G-C BY48136 YY+
hg19:Y:9767856-T-G hg38:Y:9930247-T-G FT133715 Y+
hg19:Y:9779157-G-A hg38:Y:9941548-G-A Y+
hg19:Y:9841533-A-C hg38:Y:10003924-A-C FT328341 YY+
hg19:Y:9912864-T-C hg38:Y:10075255-T-C FT262814 Y+
hg19:Y:9921278-G-T hg38:Y:10083669-G-T FT399504 Y+
hg19:Y:9927793-A-G hg38:Y:10090184-A-G BY45912 Y+
hg19:Y:9950571-C-T hg38:Y:10112962-C-T FT258083 Y+
hg19:Y:9956483-C-T hg38:Y:10118874-C-T FT262807 Y+
hg19:Y:9964040-C-T hg38:Y:10126431-C-T FT399507 Y+
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hg19:Y:18199486-C-T hg38:Y:16087606-C-T BY41001 YY+
hg19:Y:18210633-G-A hg38:Y:16098753-G-A PH3755 YY+
hg19:Y:18222259-A-T hg38:Y:16110379-A-T PH3765 Y+
hg19:Y:18231602-C-T hg38:Y:16119722-C-T FTA6098 +
hg19:Y:18255814-C-T hg38:Y:16143934-C-T V164 Y+
hg19:Y:18340489-T-TAC hg38:Y:16228609-T-TAC P6_Prx 12×AC+
hg19:Y:18397568-G-A hg38:Y:16285688-G-A BY47804 P6_Gap +
hg19:Y:18414958-C-T hg38:Y:16303078-C-T FT330872 P6_Gap +
hg19:Y:18541899-A-G hg38:Y:16430019-A-G Y+
hg19:Y:18560473-C-G hg38:Y:16448593-C-G BY46782 YY+
hg19:Y:18642654-G-A hg38:Y:16530774-G-A PH3890 V3356 YY+
hg19:Y:18661093-G-A hg38:Y:16549213-G-A PH3896 V3368 YY+
hg19:Y:18662187-G-T hg38:Y:16550307-G-T V3373 YY+
hg19:Y:18678155-A-G hg38:Y:16566275-A-G FT330962 YY+
hg19:Y:18695897-T-A hg38:Y:16584017-T-A YY+
hg19:Y:18718299-T-G hg38:Y:16606419-T-G FT330978 YY+
hg19:Y:18745378-T-A hg38:Y:16633498-T-A PH3971 YY+
hg19:Y:18787633-G-C hg38:Y:16675753-G-C PH4007 YY+
hg19:Y:18793134-A-G hg38:Y:16681254-A-G BY46049 YY+
hg19:Y:18800715-G-A hg38:Y:16688835-G-A FT331023 Y+
hg19:Y:18819300-T-C hg38:Y:16707420-T-C FT134530 YY+
hg19:Y:18854872-T-C hg38:Y:16742992-T-C FT331046 YY+
hg19:Y:18865341-C-A hg38:Y:16753461-C-A L1078 YY+
hg19:Y:18865342-C-T hg38:Y:16753462-C-T L1079 YY+
hg19:Y:18911395-A-C hg38:Y:16799515-A-C BY45749 YY+
hg19:Y:18918993-C-T hg38:Y:16807113-C-T PH4094 YY+
hg19:Y:18956766-C-T hg38:Y:16844886-C-T PH4114 YY+
hg19:Y:18981544-G-T hg38:Y:16869664-G-T V3656 YY+
hg19:Y:19020175-C-G hg38:Y:16908295-C-G YY+
hg19:Y:19065094-T-C hg38:Y:16953214-T-C FT134559 Y+
hg19:Y:19066278-G-A hg38:Y:16954398-G-A FT331154 YY+
hg19:Y:19069615-A-G hg38:Y:16957735-A-G BY46051 YY+
hg19:Y:19070056-G-A hg38:Y:16958176-G-A BY47811 YY+
hg19:Y:19087551-G-T hg38:Y:16975671-G-T PH4202 V3750 YY+
hg19:Y:19108638-G-A hg38:Y:16996758-G-A FGC66610 YY+
hg19:Y:19109790-G-A hg38:Y:16997910-G-A FT43288 YY+
hg19:Y:19123400-G-A hg38:Y:17011520-G-A BY126498 YY+
hg19:Y:19125124-T-G hg38:Y:17013244-T-G FT331184 YY+
hg19:Y:19189046-C-T hg38:Y:17077166-C-T PH4319 YY+
hg19:Y:19191591-G-A hg38:Y:17079711-G-A PH4321 V3879 YY+
hg19:Y:19205264-T-C hg38:Y:17093384-T-C PH4331 V3898 YY+
hg19:Y:19221339-C-T hg38:Y:17109459-C-T PH4354 V3921 YY+
hg19:Y:19285829-G-A hg38:Y:17173949-G-A PH4408 V3984 YY+
hg19:Y:19347394-C-T hg38:Y:17235514-C-T BY47214 YY+
hg19:Y:19389730-A-G hg38:Y:17277850-A-G Y43005 Y+
hg19:Y:19422919-C-A hg38:Y:17311039-C-A FT331309 YY+
hg19:Y:19451262-G-A hg38:Y:17339382-G-A FTA6166 YY+
hg19:Y:19457417-C-G hg38:Y:17345537-C-G BY46787 YY+
hg19:Y:19478150-C-A hg38:Y:17366270-C-A PH4525 YY+
hg19:Y:19517484-T-C hg38:Y:17405604-T-C FT331353 YY+
hg19:Y:19544924-C-T hg38:Y:17433044-C-T BY47218 YY+
hg19:Y:19545440-G-A hg38:Y:17433560-G-A BY47828 YY+
hg19:Y:20000404-A-G hg38:Y:17888524-A-G BY46057 P5_Prx +
hg19:Y:20837663-C-T hg38:Y:18675777-C-T BY47225 P4_Gap +
hg19:Y:20841408-T-C hg38:Y:18679522-T-C BY49241 P4_Gap +
hg19:Y:21041911-G-C hg38:Y:18880025-G-C PH4599 Y+
hg19:Y:21091097-C-T hg38:Y:18929211-C-T PH4632 YY+
hg19:Y:21092912-T-G hg38:Y:18931026-T-G FT331400 YY+
hg19:Y:21122974-A-C hg38:Y:18961088-A-C FT134648 Y+
hg19:Y:21150140-G-T hg38:Y:18988254-G-T BY48452 Y+
hg19:Y:21184206-A-C hg38:Y:19022320-A-C BY45758 YY+
hg19:Y:21225899-T-C hg38:Y:19064013-T-C FT331447 YY+
hg19:Y:21239110-C-T hg38:Y:19077224-C-T PH4724 YY+
hg19:Y:21244505-C-T hg38:Y:19082619-C-T FT331460 YY+
hg19:Y:21256601-G-C hg38:Y:19094715-G-C BY48213 YY+
hg19:Y:21288728-C-A hg38:Y:19126842-C-A L1011 YY+
hg19:Y:21289724-G-A hg38:Y:19127838-G-A Y30634 YY+
hg19:Y:21351730-C-A hg38:Y:19189844-C-A FTA6185 Y+
hg19:Y:21380086-C-T hg38:Y:19218200-C-T Y+
hg19:Y:21384325-C-T hg38:Y:19222439-C-T BY47232 YY+
hg19:Y:21394659-T-A hg38:Y:19232773-T-A FT134695 Y+
hg19:Y:21395433-G-T hg38:Y:19233547-G-T BY48454 YY+
hg19:Y:21413767-A-G hg38:Y:19251881-A-G BY46069 YY+
hg19:Y:21425253-A-G hg38:Y:19263367-A-G BY46070 YY+
hg19:Y:21447456-G-T hg38:Y:19285570-G-T BY48455 YY+
hg19:Y:21491398-A-G hg38:Y:19329512-A-G FT331592 YY+
hg19:Y:21516912-G-C hg38:Y:19355026-G-C FT331601 YY+
hg19:Y:21545485-G-A hg38:Y:19383599-G-A FT331621 YY+
hg19:Y:21567404-G-A hg38:Y:19405518-G-A FT224906 YY+
hg19:Y:21567405-C-T hg38:Y:19405519-C-T FT331641 YY+
hg19:Y:21584575-C-T hg38:Y:19422689-C-T FT134730 Y+
hg19:Y:21590071-G-C hg38:Y:19428185-G-C BY48215 YY+
hg19:Y:21614658-C-T hg38:Y:19452772-C-T FT134739 YY+
hg19:Y:21629868-T-C hg38:Y:19467982-T-C FTA6212 Y+
hg19:Y:21676702-G-T hg38:Y:19514816-G-T FT331684 YY+
hg19:Y:21678038-C-A hg38:Y:19516152-C-A FT134748 Y+
hg19:Y:21703228-G-A hg38:Y:19541342-G-A PH4891 YY+
hg19:Y:21722917-A-G hg38:Y:19561031-A-G FT51323 YY+
hg19:Y:21737102-A-T hg38:Y:19575216-A-T PH4916 YY+
hg19:Y:21759320-A-G hg38:Y:19597434-A-G PH4936 YY+
hg19:Y:21759560-A-T hg38:Y:19597674-A-T PH4937 YY+
hg19:Y:21795608-T-C hg38:Y:19633722-T-C FT134766 Y+
hg19:Y:21801613-C-T hg38:Y:19639727-C-T PH4956 YY+
hg19:Y:21866447-G-A hg38:Y:19704561-G-A PH4984 YY+
hg19:Y:21893300-T-C hg38:Y:19731414-T-C L1080 YY+
hg19:Y:21924336-C-G hg38:Y:19762450-C-G L1017 YY+
hg19:Y:21925174-T-C hg38:Y:19763288-T-C PH5027 YY+
hg19:Y:21943125-G-C hg38:Y:19781239-G-C Y+
hg19:Y:21945182-T-G hg38:Y:19783296-T-G FT331819 YY+
hg19:Y:21967984-T-A hg38:Y:19806098-T-A FT134797 Y+
hg19:Y:21991372-T-C hg38:Y:19829486-T-C FT331840 YY+
hg19:Y:21996032-C-T hg38:Y:19834146-C-T FT331846 YY+
hg19:Y:21997059-C-T hg38:Y:19835173-C-T Y+
hg19:Y:22054011-A-G hg38:Y:19892125-A-G FT331871 YY+
hg19:Y:22070083-C-T hg38:Y:19908197-C-T FT399492 YY+
hg19:Y:22086757-T-C hg38:Y:19924871-T-C PH5040 YY+
hg19:Y:22134132-G-A hg38:Y:19972246-G-A FT134828 YY+
hg19:Y:22167102-C-G hg38:Y:20005216-C-G BY46798 YY+
hg19:Y:22184428-G-C hg38:Y:20022542-G-C PH5079 YY+
hg19:Y:22193820-G-A hg38:Y:20031934-G-A FT331920 Y+
hg19:Y:22229770-A-G hg38:Y:20067884-A-G BY46080 DYZ19 +
hg19:Y:22229994-A-T hg38:Y:20068108-A-T BY46313 DYZ19 +
hg19:Y:22242342-C-A hg38:Y:20080456-C-A DYZ19 +
hg19:Y:22251919-G-A hg38:Y:20090033-G-A DYZ19 +
hg19:Y:22262351-G-A hg38:Y:20100465-G-A DYZ19 +
hg19:Y:22278331-C-T hg38:Y:20116445-C-T DYZ19 +
hg19:Y:22278912-C-A hg38:Y:20117026-C-A BY46610 DYZ19 +
hg19:Y:22293897-G-T hg38:Y:20132011-G-T BY48507 DYZ19 +
hg19:Y:22299532-C-T hg38:Y:20137646-C-T DYZ19 +
hg19:Y:22300114-G-C hg38:Y:20138228-G-C BY48239 DYZ19 +
hg19:Y:22302243-T-A hg38:Y:20140357-T-A BY48883 DYZ19 +
hg19:Y:22303806-C-A hg38:Y:20141920-C-A BY217016 DYZ19 +
hg19:Y:22317649-G-A hg38:Y:20155763-G-A DYZ19 +
hg19:Y:22319480-A-C hg38:Y:20157594-A-C DYZ19 +
hg19:Y:22431050-G-T hg38:Y:20269164-G-T FT456002 DYZ19 +
hg19:Y:22442178-G-C hg38:Y:20280292-G-C DYZ19 +
hg19:Y:22442416-T-G hg38:Y:20280530-T-G BY49523 DYZ19 +
hg19:Y:22447998-A-T hg38:Y:20286112-A-T DYZ19 +
hg19:Y:22460457-A-T hg38:Y:20298571-A-T FT457675 DYZ19 +
hg19:Y:22460882-G-A hg38:Y:20298996-G-A DYZ19 +
hg19:Y:22461989-T-A hg38:Y:20300103-T-A FT399499 DYZ19 +
hg19:Y:22463373-G-C hg38:Y:20301487-G-C FT399508 DYZ19 +
hg19:Y:22464510-A-C hg38:Y:20302624-A-C DYZ19 +
hg19:Y:22466450-T-C hg38:Y:20304564-T-C BY49328 DYZ19 +
hg19:Y:22470941-G-A hg38:Y:20309055-G-A BY47998 DYZ19 +
hg19:Y:22471332-A-T hg38:Y:20309446-A-T Z9694 DYZ19 +
hg19:Y:22476222-T-C hg38:Y:20314336-T-C BY49333 DYZ19 +
hg19:Y:22478445-G-A hg38:Y:20316559-G-A BY22760BY33057 DYZ19 +
hg19:Y:22480464-G-C hg38:Y:20318578-G-C BY48296 DYZ19 +
hg19:Y:22483795-A-T hg38:Y:20321909-A-T DYZ19 +
hg19:Y:22486566-C-G hg38:Y:20324680-C-G BY51838 DYZ19 +
hg19:Y:22506635-C-A hg38:Y:20344749-C-A BY46684 DYZ19 +
hg19:Y:22516383-A-C hg38:Y:20354497-A-C BY45821 Y+
hg19:Y:22530163-G-A hg38:Y:20368277-G-A FT331970 Y+
hg19:Y:22547582-T-G hg38:Y:20385696-T-G Y+
hg19:Y:22571256-C-A hg38:Y:20409370-C-A FT331987 YY+
hg19:Y:22598184-T-C hg38:Y:20436298-T-C BY49352 YY+
hg19:Y:22632249-C-T hg38:Y:20470363-C-T BY47393 Y+
hg19:Y:22654912-G-T hg38:Y:20493026-G-T FT332020 YY+
hg19:Y:22691660-C-T hg38:Y:20529774-C-T FT332037 Y+
hg19:Y:22695898-A-G hg38:Y:20534012-A-G Y+
hg19:Y:22750275-A-G hg38:Y:20588389-A-G FT332056 YY+
hg19:Y:22764607-T-C hg38:Y:20602721-T-C FT332069 YY+
hg19:Y:22764652-A-T hg38:Y:20602766-A-T BY46408 YY+
hg19:Y:22802656-G-A hg38:Y:20640770-G-A BY48030 YY+
hg19:Y:22827580-T-C hg38:Y:20665694-T-C PH5223 YY+
hg19:Y:22845508-C-A hg38:Y:20683622-C-A BY46688 YY+
hg19:Y:22845810-A-C hg38:Y:20683924-A-C BY45822 YY+
hg19:Y:22875703-G-A hg38:Y:20713817-G-A BY48034 YY+
hg19:Y:22910087-C-A hg38:Y:20748201-C-A BY46689 YY+
hg19:Y:22949733-A-G hg38:Y:20787847-A-G BY46173 YY+
hg19:Y:22958891-C-G hg38:Y:20797005-C-G BY46869 YY+
hg19:Y:22967515-A-G hg38:Y:20805629-A-G BY46174 YY+
hg19:Y:23009534-C-G hg38:Y:20847648-C-G BY142287 Y+
hg19:Y:23048099-C-T hg38:Y:20886213-C-T FT134922 Y+
hg19:Y:23050970-C-T hg38:Y:20889084-C-T FT332178 Y+
hg19:Y:23074182-A-G hg38:Y:20912296-A-G FT332183 YY+
hg19:Y:23086609-G-T hg38:Y:20924723-G-T FT134930 Y+
hg19:Y:23110674-G-T hg38:Y:20948788-G-T Y+
hg19:Y:23111102-G-A hg38:Y:20949216-G-A Y+
hg19:Y:23129014-G-T hg38:Y:20967128-G-T BY48686 YY+
hg19:Y:23151533-A-G hg38:Y:20989647-A-G FT332226 YY+
hg19:Y:23171301-G-A hg38:Y:21009415-G-A Y+
hg19:Y:23191246-C-T hg38:Y:21029360-C-T FT332247 Y+
hg19:Y:23206339-C-T hg38:Y:21044453-C-T Y+
hg19:Y:23236285-C-T hg38:Y:21074399-C-T PH5376 Y+
hg19:Y:23264719-G-A hg38:Y:21102833-G-A PH5389 YY+
hg19:Y:23265842-T-C hg38:Y:21103956-T-C BY49360 YY+
hg19:Y:23277016-G-A hg38:Y:21115130-G-A FT134964 Y+
hg19:Y:23296668-G-A hg38:Y:21134782-G-A BY48040 YY+
hg19:Y:23332022-A-G hg38:Y:21170136-A-G Z9789 YY+
hg19:Y:23417696-C-G hg38:Y:21255810-C-G BY46873 YY+
hg19:Y:23488824-A-T hg38:Y:21326938-A-T BY145693 YY+
hg19:Y:23498019-G-T hg38:Y:21336133-G-T BY48689 YY+
hg19:Y:23501342-C-G hg38:Y:21339456-C-G BY46874 YY+
hg19:Y:23591529-G-C hg38:Y:21429643-G-C BY48318 YY+
hg19:Y:23610786-C-T hg38:Y:21448900-C-T BY47410 YY+
hg19:Y:23729735-C-G hg38:Y:21567849-C-G BY46875 +
hg19:Y:23751304-C-A hg38:Y:21589418-C-A FT332535 Y+
hg19:Y:23763831-T-C hg38:Y:21601945-T-C BY49368 Y+
hg19:Y:23800810-G-T hg38:Y:21638924-G-T FT332558 Y+
hg19:Y:23821831-A-T hg38:Y:21659945-A-T FT151629 Y+
hg19:Y:23836201-T-C hg38:Y:21674315-T-C BY49369 Y+
hg19:Y:23869085-C-T hg38:Y:21707199-C-T BY47419 Y+
hg19:Y:23873446-C-T hg38:Y:21711560-C-T FT177937 Y+
hg19:Y:23971179-G-C hg38:Y:21825032-G-C FT332685 Y+
hg19:Y:24393902-T-A hg38:Y:22247755-T-A BY48967 Y+
hg19:Y:24448141-G-A hg38:Y:22301994-G-A BY48057 Y+
hg19:Y:24636557-C-T hg38:Y:22490410-C-T P3_t2 +
hg19:Y:24874897-G-A hg38:Y:22728750-G-A BY48059 g1 +
hg19:Y:25037309-A-T hg38:Y:22891162-A-T g1 8×T+
hg19:Y:27334646-C-T hg38:Y:25188499-C-T P1_g3 +
hg19:Y:28479071-A-C hg38:Y:26332924-A-C FT135068 +
hg19:Y:28488055-G-A hg38:Y:26341908-G-A +
hg19:Y:28517537-G-C hg38:Y:26371390-G-C FT135080 +
hg19:Y:28551269-A-C hg38:Y:26405122-A-C +
hg19:Y:28564540-T-C hg38:Y:26418393-T-C +
hg19:Y:28571951-G-A hg38:Y:26425804-G-A +
hg19:Y:28615245-C-T hg38:Y:26469098-C-T +
hg19:Y:28619246-A-G hg38:Y:26473099-A-G FT333000 +
hg19:Y:28629574-C-A hg38:Y:26483427-C-A FT333009 +
hg19:Y:28655095-G-A hg38:Y:26508948-G-A +
hg19:Y:28665974-G-A hg38:Y:26519827-G-A FT135124 +
hg19:Y:28718556-T-C hg38:Y:26572409-T-C +
hg19:Y:28737166-G-A hg38:Y:26591019-G-A +
hg19:Y:28738716-C-T hg38:Y:26592569-C-T FT135146 +
hg19:Y:28739099-C-A hg38:Y:26592952-C-A +
hg19:Y:28747757-C-T hg38:Y:26601610-C-T Y+
hg19:Y:28805485-A-T hg38:Y:26659338-A-T BY46425 +
hg19:Y:28811616-C-T hg38:Y:26665469-C-T BY47452 +

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.



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