McCoy

FTDNA: 100137, BigY2: 100137
MDKA Birth: Scotland

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > S699 > S756 > Z16328 > FGC32449 > FGC45274 > ~22261318-T-G > A3262 > A30 > A35 > BY155

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
100137		BigY2
100137
27341257-TTAGGC-T 25195110-TTAGGC-T P1_g3 **
58976679-TTGCATTCTGC-T 56830532-TTGCATTCTGC-T **
13857970-C-A 11737264-C-A DYZ17 **
13857974-T-A 11737268-T-A DYZ17 **
14050745-C-A 11930039-C-A **
27497074-C-T 25350927-C-T BY26442 P1_Y2 14×T**
21375671-C-T 19213785-C-T Y20420Y20356 FGC46214 **
5776564-G-A 5908523-G-A 11×A**
8075929-A-T 8207888-A-T **
15323679-AG-A 13211797-AG-A **
22011578-AG-A 19849692-AG-A **
16933315-C-A 14821435-C-A **
20025470-T-C 17913590-T-C P5_Prx **
14698396-T-A 12586462-T-A **
21306573-C-A 19144687-C-A **
14648745-C-A 12536810-C-A **
14517673-C-A 12405874-C-A **
22485224-T-C 20323338-T-C FGC43670 DYZ19 **
18270249-C-A 16158369-C-A 35×A**
27423515-G-GTATATATATA 25277368-G-GTATATATATA P1_g3 24×TA**
27497058-C-T 25350911-C-T P1_Y2 **
27497071-C-T 25350924-C-T P1_Y2 **
22485209-A-T 20323323-A-T DYZ19 **
13854621-C-A 11733915-C-A DYZ17 **
10824176-C-T **
20438791-A-T 18276905-A-T P5_Dst **
13997756-C-A 11877050-C-A **
10894508-C-T **
10895750-G-C **
23048218-C-A 20886332-C-A **
5761537-C-A 5893496-C-A **
11033788-C-T **
11033795-G-C **
14933559-A-T 12821624-A-T **
10764166-C-T **
10764184-T-G **
10968241-T-C **
10888047-A-C **
10895803-T-C **
7165305-G-T 7297264-G-T **
23623459-C-A 21461573-C-A **
21934625-A-G 19772739-A-G **
10802654-T-A **
16015834-C-A 13903954-C-A **
23807441-G-T 21645555-G-T **
10755666-C-A **
10755667-C-A FT429803 **
10755676-A-T **
10755698-A-AATG **
10755699-CACT-C **
10755719-C-A **
11033806-C-A **
11033807-A-C **
11033812-A-T **
11033813-C-T **
20101660-G-A 17989780-G-A P5_Dst **
25990685-A-G 23844538-A-G P1_Y1 **
4387995-C-A 4519954-C-A **
10768680-C-T **
11007495-A-C FT393473 **
22536016-C-A 20374130-C-A **
11008373-G-A **
11008391-C-CATTCT **
9636619-TG-T 9799010-TG-T IR3_Prx **
10895846-C-T **
27423574-A-T 25277427-A-T P1_g3 **
8056196-G-T 8188155-G-T **
3435823-C-A 3567782-C-A **
10977353-G-T **
7223024-CA-C 7354983-CA-C 8×A**
10801687-C-CACTGA **
10667020-A-G **
11024908-C-A **
15926770-C-A 13814890-C-A **
10744509-C-T **
11674996-C-A DYZ17 **
28500996-G-T 26354849-G-T **
7444085-T-C 7576044-T-C **
13207959-C-A 11052283-C-A **
10895795-C-A **
21946483-C-A 19784597-C-A Y107968 **
7277579-C-A 7409538-C-A **
10768660-T-C **
10992285-C-A **
27861871-G-T 25715724-G-T P1_Y2 **
20438816-A-T 18276930-A-T P5_Dst **
10895853-T-A **
10926528-C-A **
16743025-C-A 14631145-C-A **
16827572-C-A 14715692-C-A **
14926461-T-C 12814526-T-C **
24904717-C-T 22758570-C-T g1 **
20750711-T-TC 18588825-T-TC P4_Prx **
14559129-C-A 12447330-C-A **
13698925-C-A 11543249-C-A DYZ17 **
14118219-T-C 11997513-T-C **
17821844-C-A 15709964-C-A **
10809415-C-A **
10865868-A-C **
14933560-C-T 12821625-C-T **
10987395-A-ATCCGG **
10987759-C-T **
9437196-C-A 9599587-C-A **
10785608-C-A **
14297912-C-A 12177206-C-A **
10962829-A-C **
10962831-T-A **
10962833-T-C **
10962836-T-A **
10962840-C-T **
10962855-TTGCCC-T **
13218989-AG-A 11063313-AG-A **
15995561-C-A 13883681-C-A 7460739-G-TAMM262 Z2932 **
16085495-C-A 13973615-C-A **
21754457-G-A **
22011586-A-C 19849700-A-C FTB49484 **
18270246-T-A 16158366-T-A **
26409794-C-A 24263647-C-A P1_Y1 **
7310559-C-G 7442518-C-G **
22091270-C-A 19929384-C-A **
25647084-G-A 23500937-G-A P1_b3 **
56842480-G-T **
4101115-C-A 4233074-C-A **
10895851-C-A **
7152856-C-A 7284815-C-A **
4671692-C-A 4803651-C-A **
10768671-T-C **
17201757-C-A 15089877-C-A **
10672810-C-CCACTA **
10672798-T-C **
14371662-C-A 12250958-C-A **
10811059-G-C **
10662413-C-A **
10653412-C-A **
10671050-C-T **
20025468-T-C 17913588-T-C P5_Prx **
22113686-C-A 19951800-C-A **
3501154-C-A 3633113-C-A FT235115 **
14128254-C-A 12007548-C-A **
4394379-G-T 4526338-G-T **
13462300-T-A 11306624-T-A **
22181824-C-A 20019938-C-A **
14473009-C-A 12352278-C-A **
25892191-T-A 23746044-T-A P1_Y1 **
19510237-C-A 17398357-C-A **
11652734-C-A DYZ17 **
7188274-C-A 7320233-C-A **
17638379-C-A 15526499-C-A **
14835343-A-T 12723410-A-T **
19847678-G-C 17735798-G-C P5_Prx **
20755496-C-T 18593610-C-T P4_Prx **
10987744-C-A **
8056150-G-T 8188109-G-T **
10865860-T-C **
16180909-GA-G 14069029-GA-G 8×A**
13224687-C-A 11069011-C-A **
15622413-C-A 13510533-C-A **
7308319-C-A 7440278-C-A **
10987756-T-C **
3721471-C-A 3853430-C-A **
5293902-A-G 5425861-A-G **
24910906-A-ATATT 22764759-A-ATATT g1 **
10825279-C-CAATT **
10825280-C-CTATTCGGATTA **
13394839-C-A 11239163-C-A 13×G**
9623647-A-AG 9786038-A-AG IR3_Prx **
17263103-C-A 15151223-C-A **
21526922-C-A 19365036-C-A **
16765570-C-A 14653690-C-A **
11664585-C-A DYZ17 **
10968416-C-T FT92133 **
15786721-C-A 13674841-C-A **
10958880-C-A **
10881125-A-T **
13857969-C-A 11737263-C-A DYZ17 **
14225592-C-A 12104886-C-A **
10752753-A-T **
15161206-C-A 13049292-C-A **
7202216-C-A 7334175-C-A **
3285724-C-A 3417683-C-A **
10672855-C-T **
25647101-T-A 23500954-T-A P1_b3 **
17128564-A-T 15016684-A-T **
21306584-T-C 19144698-T-C **
10874609-A-C FT219960 **
10962875-C-T **
13858031-G-C 11737325-G-C DYZ17 **
22811090-C-A 20649204-C-A **
15332228-C-A 13220346-C-A **
18518291-T-G 16406411-T-G P6_Dst **
26563086-C-A 24416939-C-A P1_g2 **
21750913-G-T **
10865864-T-A **
10895760-C-T **
17402420-C-A 15290540-C-A **
20654885-T-A 18492999-T-A P4_Prx **
13875643-A-T 11754937-A-T FGC36895FGC48670 **
13857965-G-T 11737259-G-T DYZ17 **
13603066-C-A 11447390-C-A **
23111843-C-A 20949957-C-A **
10865867-A-C **
7033597-C-A 7165556-C-A **
10811060-A-C **
14076089-C-A 11955383-C-A **
28614698-T-C 26468551-T-C **
28614699-G-A 26468552-G-A **
10971521-C-A **
9934164-C-A 10096555-C-A **
10895773-T-A **
2708268-A-T 2840227-A-T **
2909129-C-T 3041088-C-T **
2909155-A-G 3041114-A-G FT190012 **
2956040-T-A 3087999-T-A **
2966436-C-A 3098395-C-A **
3078385-T-G 3210344-T-G **
3269852-G-T 3401811-G-T **
3341233-A-G 3473192-A-G **
3375521-C-A 3507480-C-A **
3389948-A-T 3521907-A-T **
3405476-C-A 3537435-C-A **
3505153-G-T 3637112-G-T **
3518293-G-A 3650252-G-A **
3518432-C-A 3650391-C-A **
3927127-C-A 4059086-C-A **
3968970-G-T 4100929-G-T **
4070247-A-T 4202206-A-T **
4103199-C-T 4235158-C-T **
4103702-A-G 4235661-A-G **
4438010-G-A 4569969-G-A **
4446740-C-A 4578699-C-A **
4473585-G-T 4605544-G-T **
4553301-A-T 4685260-A-T **
4568286-T-A 4700245-T-A **
4805423-C-A 4937382-C-A **
4839788-G-T 4971747-G-T **
5074224-C-A 5206183-C-A **
5213911-C-T 5345870-C-T **
5219571-G-T 5351530-G-T **
5251910-G-A 5383869-G-A **
5251914-T-C 5383873-T-C **
5251938-G-A 5383897-G-A FT211583 **
5337037-G-T 5468996-G-T **
5338009-T-C 5469968-T-C **
5349455-G-T 5481414-G-T **
5577558-C-A 5709517-C-A **
5626017-G-C 5757976-G-C **
5650772-G-T 5782731-G-T **
5688468-A-T 5820427-A-T **
5698681-C-T 5830640-C-T **
5864649-A-G 5996608-A-G **
5990204-A-C 6122163-A-C **
5990340-G-C 6122299-G-C **
6137927-G-T 6269886-G-T IR3_Dst **
6359637-G-A 6491596-G-A **
6368739-G-C 6500698-G-C **
6403697-G-A 6535656-G-A **
6412450-G-T 6544409-G-T **
6776306-G-A 6908265-G-A **
6881437-G-A 7013396-G-A **
6944897-C-A 7076856-C-A **
7054204-T-A 7186163-T-A **
7060877-C-A 7192836-C-A **
7102006-C-A 7233965-C-A **
7102443-A-C 7234402-A-C **
7107056-G-T 7239015-G-T **
7186730-C-A 7318689-C-A **
7217421-A-T 7349380-A-T **
7223155-G-A 7355114-G-A **
7239691-T-C 7371650-T-C **
7257939-CA-C 7389898-CA-C **
7427957-C-A 7559916-C-A **
7885952-G-T 8017911-G-T **
8073122-G-T 8205081-G-T **
8075909-G-T 8207868-G-T **
8075921-G-T 8207880-G-T **
8075933-TGGC-T 8207892-TGGC-T **
8075936-C-CTT 8207895-C-CTT 17×T**
8079465-C-A 8211424-C-A **
8085302-G-C 8217261-G-C Y26411 **
8092038-A-G 8223997-A-G **
8296962-C-A 8428921-C-A **
8343002-C-A 8474961-C-A **
8379520-C-A 8511479-C-A FT12710 **
8661871-C-T 8793830-C-T **
8697416-C-A 8829375-C-A **
8799719-T-G 8931678-T-G **
9057525-C-A **
9444895-C-G 9607286-C-G **
9471744-C-A 9634135-C-A **
9498654-C-A 9661045-C-A **
9503938-G-T 9666329-G-T **
9825074-C-A 9987465-C-A **
9931452-T-C 10093843-T-C **
9943532-G-A 10105923-G-A **
10003647-C-T 10166038-C-T **
10050125-T-C 10212516-T-C **
10656220-G-T **
10662661-C-A **
10667009-C-CTCTCCG **
10667010-AT-A **
10667031-T-A **
10745348-T-A **
10753492-T-A **
10757208-C-A **
10757458-T-C **
10761645-C-G **
10768646-T-G **
10768661-T-A **
10768678-C-T **
10768689-A-G **
10768694-A-ATTCTG **
10768697-C-CCAGTA **
10775260-C-T **
10778707-T-C **
10790094-C-A **
10797869-T-C **
10797875-T-C **
10806924-G-A FT432070 **
10809489-C-A **
10811050-A-C **
10811065-T-C **
10816476-C-A **
10821034-C-A **
10824189-T-A **
10827522-C-T FT292865 **
10827529-T-C **
10827534-T-C **
10844328-C-A **
10845785-C-A **
10847000-A-T **
10865855-T-C **
10870775-T-C **
10874805-T-C **
10874810-A-C **
10875753-T-G **
10875811-C-A **
10880825-C-A **
10883695-T-C **
10895805-C-G **
10895808-T-TTCCAC **
10895866-C-T **
10902912-G-A FT436034 **
10949272-C-A **
10972038-C-A **
10974252-C-A **
10980094-C-A **
10986519-C-T **
10988044-C-T **
10992322-T-TTCGGC **
10995011-C-A **
11001679-C-T **
11007296-T-A **
11007306-T-G **
11013972-C-A **
11017282-C-A **
11027112-T-C **
11031673-C-T **
13223752-G-T 11068076-G-T **
13306355-C-A 11150679-C-A **
13324888-C-A 11169212-C-A **
13468472-CG-C 11312796-CG-C **
13579390-G-T 11423714-G-T **
13598515-G-A 11442839-G-A **
13598540-T-G 11442864-T-G **
13611856-AT-A 11456180-AT-A **
13644071-G-A 11488395-G-A **
13717738-T-A 11562062-T-A DYZ17 **
11650000-C-A DYZ17 **
13875547-G-T 11754841-G-T **
13875648-A-T 11754942-A-T **
13885556-C-A 11764850-C-A **
13898952-C-T 11778246-C-T **
13941647-G-T 11820941-G-T **
13997763-G-A 11877057-G-A **
14030278-A-G 11909572-A-G **
14032033-T-C 11911327-T-C **
14152268-C-T 12031562-C-T **
14155229-G-T 12034523-G-T **
14328177-T-A 12207471-T-A **
14387445-C-A 12266741-C-A **
14427482-A-T 12306757-A-T **
14449708-G-C 12328981-G-C **
14514939-A-T 12403144-A-T **
14518852-C-T 12407053-C-T **
14518853-T-G 12407054-T-G FT109203 **
14566505-G-T 12454705-G-T **
14585322-C-A 12473522-C-A **
14614637-C-A 12502835-C-A **
14618044-G-A 12506242-G-A **
14649547-T-A 12537612-T-A **
14726332-A-G 12614400-A-G **
14769246-G-A 12657315-G-A **
15102409-T-G 12990497-T-G **
15179204-T-C 13067290-T-C **
15185372-G-T 13073458-G-T **
15185441-G-T 13073527-G-T **
15276512-AG-A 13164601-AG-A **
15290953-A-G 13179052-A-G **
15366454-C-A 13254574-C-A **
16015858-A-G 13903978-A-G **
16028365-C-A 13916485-C-A **
16035767-G-A 13923887-G-A **
16115520-T-TG 14003640-T-TG P8_Prx **
16399897-C-A 14288017-C-A **
16430153-A-G 14318273-A-G **
16445640-G-A 14333760-G-A **
16648293-AT-A 14536413-AT-A **
16702825-C-A 14590945-C-A **
16743010-G-A 14631130-G-A **
16938344-C-A 14826464-C-A **
17046715-GTTTTTTTT-G 14934835-GTTTTTTTT-G 25×T**
17058644-G-A 14946764-G-A **
17100466-T-G 14988586-T-G **
17245990-A-T 15134110-A-T **
17270552-A-G 15158672-A-G **
17426955-C-A 15315075-C-A **
17434033-C-A 15322153-C-A **
17518998-C-A 15407118-C-A **
17624528-C-A 15512648-C-A **
17997611-T-G 15885731-T-G P7_Gap **
18054002-GTT-G 15942122-GTT-G 13×T**
18151969-T-C 16040089-T-C **
18194435-T-A 16082555-T-A **
18247268-C-A 16135388-C-A **
18518292-TGG-T 16406412-TGG-T P6_Dst **
18748768-T-A 16636888-T-A **
18748899-T-A 16637019-T-A **
18864744-C-A 16752864-C-A **
18892070-G-C 16780190-G-C **
19052297-C-A 16940417-C-A **
19138764-C-G 17026884-C-G **
19168898-A-G 17057018-A-G **
19206739-GGT-A 17094859-GGT-A **
19741019-A-G 17629139-A-G P5_Prx **
20434786-G-GA 18272900-G-GA P5_Dst **
20438795-G-A 18276909-G-A P5_Dst **
20438807-C-A 18276921-C-A P5_Dst **
20438828-C-T 18276942-C-T P5_Dst **
20809458-T-C 18647572-T-C P4_Gap **
20983059-A-AC 18821173-A-AC P4_Dst **
21133375-G-T 18971489-G-T **
21200238-T-A 19038352-T-A **
21219790-G-T 19057904-G-T **
21306583-C-A 19144697-C-A **
21323310-C-A 19161424-C-A **
21334922-G-A 19173036-G-A **
21511277-C-A 19349391-C-A **
21534894-A-G 19373008-A-G **
21554333-C-A 19392447-C-A **
21604043-T-C 19442157-T-C **
21738583-C-G 19576697-C-G **
22125687-A-T 19963801-A-T **
22146598-T-G 19984712-T-G **
22205254-G-T 20043368-G-T **
22423415-A-C 20261529-A-C DYZ19 **
22457385-A-C 20295499-A-C DYZ19 **
22485216-G-T 20323330-G-T BY27281 DYZ19 **
22520580-A-G 20358694-A-G **
22987602-C-A 20825716-C-A **
22997440-A-C 20835554-A-C **
23211339-T-A 21049453-T-A **
23249336-T-G 21087450-T-G **
23260824-C-A 21098938-C-A **
23360600-G-A 21198714-G-A **
23455110-C-T 21293224-C-T A4450 **
23520641-C-G 21358755-C-G **
23609218-G-T 21447332-G-T **
23786372-C-A 21624486-C-A **
25376565-T-A 23230418-T-A P2_r2 **
25376567-A-T 23230420-A-T P2_r2 **
25376574-A-T 23230427-A-T P2_r2 **
25647082-A-C 23500935-A-C P1_b3 **
25647083-T-C 23500936-T-C P1_b3 **
25647093-A-T 23500946-A-T P1_b3 **
25884052-T-A 23737905-T-A P1_Y1 **
25884160-G-A 23738013-G-A P1_Y1 **
25892193-A-T 23746046-A-T P1_Y1 **
25971180-T-C 23825033-T-C P1_Y1 **
25994034-T-A 23847887-T-A P1_Y1 **
25997091-A-T 23850944-A-T P1_Y1 **
26011482-A-ATG 23865335-A-ATG P1_Y1 10×T**
26060058-G-A 23913911-G-A P1_Y1 **
26834693-G-T 24688546-G-T P1_g2 **
26991319-G-A 24845172-G-A P1_r4 **
26991325-A-G 24845178-A-G P1_r4 **
26991327-C-A 24845180-C-A P1_r4 **
27596049-T-A 25449902-T-A P1_Y2 **
27906828-G-T 25760681-G-T P1_Y2 **
28463920-C-T 26317773-C-T **
28484326-C-T 26338179-C-T **
28525120-A-G 26378973-A-G **
28614705-A-G 26468558-A-G **
28719955-C-A 26573808-C-A **
28754991-T-C 26608844-T-C Y81024 **
28765393-C-A 26619246-C-A **
28777735-G-A 26631588-G-A **
28792448-G-T 26646301-G-T **
28792455-G-A 26646308-G-A **
56844493-A-G **
56850530-T-C **
56876134-A-AGGCCCTGT **
56876177-A-G **
6130684-C-T 6262643-C-T ***
7269601-C-T 7401560-C-T ***
7582106-C-A 7714065-C-A 14×A***
9178443-C-T 9340834-C-T FTB17283 ***
9210473-C-G 9372864-C-G ***
9222464-C-A 9384855-C-A ***
9311681-C-CT 9474072-C-CT 14×T***
9962875-C-A 10125266-C-A ***
9962877-C-A 10125268-C-A ***
9963086-AAG-A 10125477-AAG-A ***
9963090-G-A 10125481-G-A ***
9967561-TGTTGA-T 10129952-TGTTGA-T ***
9985371-T-C 10147762-T-C ***
9986589-G-A 10148980-G-A ***
9994858-A-T 10157249-A-T ***
9995127-C-T 10157518-C-T ***
10024136-G-T 10186527-G-T ***
10024558-G-C 10186949-G-C ***
13138477-A-C 10627963-A-C ***
13139302-TTCAGTTGGAA-T 10628788-TTCAGTTGGAA-T ***
13140113-T-C 10629599-T-C ***
13302078-CA-C 11146402-CA-C ***
13430263-C-CAT 11274587-C-CAT ***
13430266-T-C 11274590-T-C ***
13447881-T-C 11292205-T-C ***
13449362-T-TTCCACTCCAC 11293686-T-TTCCACTCCAC ***
13450431-T-C 11294755-T-C ***
13452849-C-G 11297173-C-G ***
13453105-C-A,G 11297429-C-A,G ***
13453593-G-C 11297917-G-C ***
13455949-CACTCCACTCA-C 11300273-CACTCCACTCA-C ***
13455970-A-T 11300294-A-T FT443825 ***
13455978-C-G 11300302-C-G ***
13456251-T-TTCCAA 11300575-T-TTCCAA ***
13459186-C-G 11303510-C-G ***
13489629-C-T 11333953-C-T ***
13598839-C-T 11443163-C-T ***
13658767-GAATGA-G 11503091-GAATGA-G DYZ17 ***
13660517-G-A 11504841-G-A DYZ17 ***
13668026-A-G 11512350-A-G DYZ17 ***
13688450-A-T 11532774-A-T DYZ17 ***
13688650-G-C 11532974-G-C DYZ17 ***
13688656-C-G 11532980-C-G DYZ17 ***
13691202-C-T 11535526-C-T FT448650 DYZ17 ***
13691226-T-A 11535550-T-A BY50608 DYZ17 ***
13691298-G-C 11535622-G-C DYZ17 ***
13691299-G-A 11535623-G-A DYZ17 ***
13691306-A-G 11535630-A-G DYZ17 ***
13693855-G-T 11538179-G-T DYZ17 ***
13693892-A-G 11538216-A-G DYZ17 ***
13697623-A-G 11541947-A-G DYZ17 ***
13697625-C-A 11541949-C-A DYZ17 ***
13697631-G-T 11541955-G-T DYZ17 ***
13699529-A-T 11543853-A-T DYZ17 ***
13700705-GAAACGAATGGAATGC-G 11545029-GAAACGAATGGAATGC-G DYZ17 ***
13700750-T-TATGGAATGGAATGGAATGGAATGGA 11545074-T-TATGGAATGGAATGGAATGGAATGGA DYZ17 ***
13704301-A-G 11548625-A-G DYZ17 ***
13705124-A-G 11549448-A-G DYZ17 ***
13713655-AGGAAT-A 11557979-AGGAAT-A DYZ17 ***
13734341-CGAATAGAATG-C 11578665-CGAATAGAATG-C DYZ17 ***
13735261-G-T 11579585-G-T DYZ17 ***
13802860-ATCGAG-A 11682154-ATCGAG-A DYZ17 ***
13821158-GGCAAA-G 11700452-GGCAAA-G DYZ17 ***
13821759-A-G 11701053-A-G DYZ17 ***
13821823-T-G 11701117-T-G DYZ17 ***
13833927-T-G 11713221-T-G DYZ17 ***
13839858-A-T 11719152-A-T BY91101 DYZ17 ***
13843452-C-A 11722746-C-A DYZ17 ***
13843457-G-A 11722751-G-A DYZ17 ***
13843469-A-G 11722763-A-G DYZ17 ***
13843997-C-A,G 11723291-C-A,G DYZ17 4×TGGAA***
13846211-A-G 11725505-A-G DYZ17 ***
13846214-G-T 11725508-G-T DYZ17 ***
13846535-G-A 11725829-G-A DYZ17 ***
13846539-A-C 11725833-A-C DYZ17 ***
13846548-T-C 11725842-T-C DYZ17 ***
13847199-GAATGGACTCA-G 11726493-GAATGGACTCA-G DYZ17 ***
13847935-A-C 11727229-A-C DYZ17 ***
13866592-A-G 11745886-A-G DYZ17 ***
13866593-A-T 11745887-A-T DYZ17 ***
13866607-C-A 11745901-C-A DYZ17 ***
13866609-C-G 11745903-C-G DYZ17 ***
13883722-A-G 11763016-A-G ***
16157772-AAG-A 14045892-AAG-A P8_Dst ***
16157787-A-G 14045907-A-G P8_Dst ***
16890682-T-G 14778802-T-G ***
17920941-C-CAAA 15809061-C-CAAA 45×A***
17920987-G-A 15809107-G-A PR2691 FT74223 ***
17951464-TCTCA-T 15839584-TCTCA-T ***
17992525-T-A 15880645-T-A P7_Prx ***
19411974-A-G 17300094-A-G FGC61678 ***
20019185-CTT-C 17907305-CTT-C P5_Prx 20×T***
22147856-T-C 19985970-T-C ***
22229715-G-A 20067829-G-A DYZ19 ***
22229716-T-C 20067830-T-C DYZ19 ***
22295878-T-G 20133992-T-G DYZ19 ***
22341507-G-T 20179621-G-T DYZ19 ***
22362035-T-G 20200149-T-G DYZ19 ***
22453194-G-A 20291308-G-A DYZ19 ***
22453208-A-T 20291322-A-T DYZ19 ***
22502217-G-C 20340331-G-C DYZ19 ***
23633370-TC-T 21471484-TC-T ***
23897325-T-A 21735439-T-A ***
24302816-CAA-C 22156669-CAA-C P3_t1 24×A***
24312298-T-TA 22166151-T-TA P3_t1 14×A***
24860018-C-A,CA 22713871-C-A,CA IR1_R 27×A***
25198319-C-CT 23052172-C-CT g1 14×T***
26190682-T-A 24044535-T-A P1_Y1 ***
27161909-G-C 25015762-G-C P1_g3 ***
28792387-C-G 26646240-C-G ***
28802509-T-G 26656362-T-G BY2534 ***
28803464-T-C 26657317-T-C ***
28807543-C-G 26661396-C-G ***
28807558-C-T 26661411-C-T ***
28809430-TGGAATGTAAG-T 26663283-TGGAATGTAAG-T ***
28811945-T-G 26665798-T-G ***
28814691-AG-A,GA 26668544-AG-A,GA ***
28817594-C-G 26671447-C-G ***
58975131-C-A 56828984-C-A ***
13446527-C-CTCCATTCCAT,T 11290851-C-CTCCATTCCAT,T 16×TCCAT***
13463768-G-GC,T 11308092-G-GC,T ***
7470700-C-A,CA 7602659-C-A,CA IR1_L 25×A***
13218999-G-A 11063323-G-A ***
13691228-GGATCGCAGTA-G,GGATGGGAGTA 11535552-GGATCGCAGTA-G,GGATGGGAGTA DYZ17 ***
13488905-C-G 11333229-C-G ***
17675561-AG-A 15563681-AG-A ***
17672341-T-G 15560461-T-G S20050 ***
5785700-AC-A,AA 5917659-AC-A,AA ***
17323753-T-G 15211873-T-G 4×GGAG***
9013281-A-G 9175672-A-G ***
17140505-A-T 15028625-A-T ***
21394636-C-A 19232750-C-A ***
14316186-CTT-C,CT 12195480-CTT-C,CT 14×T***
13487758-C-T 11332082-C-T ***
10824134-C-T ***
5869958-G-A 6001917-G-A ***
10758029-C-T ***
10758032-C-T ***
10758040-C-T ***
6867680-GTTT-G 6999639-GTTT-G 18×T***
3790866-G-A 3922825-G-A ***
10672541-C-A ***
9131332-C-A 9293723-C-A ***
22023221-TG-G,TT 19861335-TG-G,TT ***
23034339-G-T 20872453-G-T ***
8016937-C-T 8148896-C-T ***
13643060-C-A 11487384-C-A ***
23439998-G-A 21278112-G-A BY174426 ***
22210650-C-A 20048764-C-A ***
15129813-G-T 13017900-G-T ***
23439989-G-A 21278103-G-A ***
3550572-CTC-A,CTA 3682531-CTC-A,CTA ***
7061847-C-T 7193806-C-T ***
7255193-T-A 7387152-T-A ***
10753964-C-A ***
10791329-C-A ***
10942718-A-G ***
13488924-G-C,T 11333248-G-C,T ***
13489007-A-G 11333331-A-G ***
13643033-CATTCGATT-C 11487357-CATTCGATT-C ***
14269781-C-A 12149075-C-A ***
16003119-T-C 13891239-T-C ***
17323623-G-A 15211743-G-A ***
21316954-G-A 19155068-G-A ***
23439980-T-TCA 21278094-T-TCA ***
23439987-T-C 21278101-T-C ***
23440000-T-C 21278114-T-C ***
23440007-G-A 21278121-G-A ***
23440008-T-A 21278122-T-A ***
28157483-A-T 26011336-A-T P1_b4 ***
56836049-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.