McDonald
FTDNA: 12816, BigY2: 12816MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 12816 | BigY2 12816 |
---|---|---|---|---|---|---|---|---|---|
14004107-C-A | 11883401-C-A | Y89985 | Y | Y | + | + | |||
22459806-A-T | 20297920-A-T | BY155288 | DYZ19 | + | + | ||||
18195204-C-G | 16083324-C-G | Y | Y | * | |||||
22435748-G-A | 20273862-G-A | DYZ19 | ** | ||||||
9921849-GTTT-G | 10084240-GTTT-G | ** | |||||||
15495167-C-A | 13383287-C-A | 14×A | ** | ||||||
14512065-C-A | 12400270-C-A | ** | |||||||
14143010-T-A | 12022304-T-A | ** | |||||||
14825148-C-T | 12713215-C-T | ** | |||||||
22816242-A-C | 20654356-A-C | FGC24557 | ** | ||||||
17425117-C-A | 15313237-C-A | ** | |||||||
22816223-A-G | 20654337-A-G | Z9740 | ** | ||||||
22816217-G-A | 20654331-G-A | ** | |||||||
22309943-G-T | 20148057-G-T | DYZ19 | ** | ||||||
22816228-C-T | 20654342-C-T | ** | |||||||
20815408-CATATATAT-C | 18653522-CATATATAT-C | P4_Gap | 22×AT | ** | |||||
2738754-C-T | 2870713-C-T | 8×T | ** | ||||||
13809648-G-T | 11688942-G-T | ** | |||||||
8124937-C-A | 8256896-C-A | A3721 | ** | ||||||
14331155-TTGC-T | 12210449-TTGC-T | ** | |||||||
10673580-T-A | ** | ||||||||
10673581-C-G | ** | ||||||||
10673601-C-CTAATA | ** | ||||||||
10673604-C-A | ** | ||||||||
10673609-T-A | ** | ||||||||
10673616-C-A | ** | ||||||||
10673651-A-C | ** | ||||||||
16516293-C-T | 14404413-C-T | ** | |||||||
10979378-C-T | ** | ||||||||
10979387-A-C | FT92159 | ** | |||||||
10979389-A-ATTCCT | ** | ||||||||
10979412-T-A | ** | ||||||||
10979417-A-C | ** | ||||||||
10979418-CATTAA-C | ** | ||||||||
10979427-T-C | ** | ||||||||
10979428-G-C | ** | ||||||||
10979442-G-C | ** | ||||||||
10987901-C-T | ** | ||||||||
6346074-C-A | 6478033-C-A | ** | |||||||
23434145-C-A | 21272259-C-A | ** | |||||||
2718916-G-C | 2850875-G-C | ** | |||||||
10825244-C-T | ** | ||||||||
7269633-GC-T | 7401592-GC-T | ** | |||||||
15733762-C-A | 13621882-C-A | ** | |||||||
6856792-C-A | 6988751-C-A | ** | |||||||
17385502-G-T | 15273622-G-T | FGC76238 | ** | ||||||
13326222-A-T | 11170546-A-T | ** | |||||||
17718440-G-T | 15606560-G-T | ** | |||||||
14423925-G-T | 12303200-G-T | ** | |||||||
10976972-T-C | ** | ||||||||
14581119-C-A | 12469319-C-A | ** | |||||||
7534678-T-G | 7666637-T-G | ** | |||||||
15342653-T-A | 13230772-T-A | FT5374 | 11×A | ** | |||||
10651552-C-G | ** | ||||||||
10651559-T-C | ** | ||||||||
10651608-C-T | ** | ||||||||
18825629-CAAAAAAA-C | 16713749-CAAAAAAA-C | 20×A | ** | ||||||
24405315-G-A | 22259168-G-A | ** | |||||||
6305856-AC-A | 6437815-AC-A | IR3_Dst | ** | ||||||
10660930-T-C | ** | ||||||||
13480721-G-A | 11325045-G-A | ** | |||||||
13480771-G-A | 11325095-G-A | ** | |||||||
24466004-C-A | 22319857-C-A | ** | |||||||
9048142-AT-A | 9210533-AT-A | ** | |||||||
10844250-T-C | ** | ||||||||
21543099-C-A | 19381213-C-A | ** | |||||||
6241003-A-G | 6372962-A-G | IR3_Dst | ** | ||||||
22001894-A-G | 19840008-A-G | ** | |||||||
10808651-C-T | ** | ||||||||
11677167-C-A | ** | ||||||||
7783144-C-A | 7915103-C-A | ** | |||||||
16277844-C-A | 14165964-C-A | ** | |||||||
23225402-C-A | 21063516-C-A | ** | |||||||
18443620-G-T | 16331740-G-T | P6_Dst | ** | ||||||
15688427-C-A | 13576547-C-A | ** | |||||||
10976978-A-C | ** | ||||||||
4672354-C-A | 4804313-C-A | ** | |||||||
7097941-C-A | 7229900-C-A | ** | |||||||
10770867-C-A | ** | ||||||||
10988629-C-G | ** | ||||||||
16412322-G-A | 14300442-G-A | ** | |||||||
13298690-C-A | 11143014-C-A | ** | |||||||
10778314-T-C | ** | ||||||||
17310939-G-GTT | 15199059-G-GTT | 13×T | ** | ||||||
11002038-C-A | ** | ||||||||
26154009-A-T | 24007862-A-T | P1_Y1 | ** | ||||||
14754097-G-A | 12642166-G-A | ** | |||||||
10825242-T-A | ** | ||||||||
7270304-G-A | 7402263-G-A | ** | |||||||
22027828-C-A | 19865942-C-A | ** | |||||||
10981138-C-A | ** | ||||||||
7223302-GT-G | 7355261-GT-G | 9×T | ** | ||||||
5785653-C-A | 5917612-C-A | ** | |||||||
10844177-C-T | ** | ||||||||
10894041-C-A | ** | ||||||||
24127429-G-T | 21981282-G-T | P3_b1 | ** | ||||||
17885764-G-T | 15773884-G-T | ** | |||||||
10839846-G-C | ** | ||||||||
13442815-C-A | 11287139-C-A | ** | |||||||
9937660-C-A | 10100051-C-A | ** | |||||||
10868176-G-C | ** | ||||||||
14512439-A-G | 12400644-A-G | ** | |||||||
10825285-C-GGGTTA | ** | ||||||||
11645506-T-A | ** | ||||||||
11645509-A-T | ** | ||||||||
11645513-A-T | ** | ||||||||
11645514-T-A | ** | ||||||||
11645526-T-C | ** | ||||||||
11645530-A-T | ** | ||||||||
11645533-G-C | ** | ||||||||
11645542-A-G | ** | ||||||||
19155203-C-A | 17043323-C-A | ** | |||||||
9116824-G-T | 9279215-G-T | ** | |||||||
10844165-T-C | ** | ||||||||
19187705-G-A | 17075825-G-A | FGC52767 | ** | ||||||
10993130-A-T | ** | ||||||||
17301225-T-G | 15189345-T-G | ** | |||||||
4928953-C-A | 5060912-C-A | ** | |||||||
3389934-C-A | 3521893-C-A | ** | |||||||
13229556-C-A | 11073880-C-A | ** | |||||||
4908209-C-A | 5040168-C-A | ** | |||||||
22739642-C-A | 20577756-C-A | ** | |||||||
10947015-C-A | ** | ||||||||
23435796-C-A | 21273910-C-A | ** | |||||||
15696887-C-A | 13585007-C-A | ** | |||||||
5691050-C-A | 5823009-C-A | ** | |||||||
16526562-C-A | 14414682-C-A | ** | |||||||
10950911-C-G | ** | ||||||||
28580367-T-G | 26434220-T-G | ** | |||||||
18989749-C-A | 16877869-C-A | ** | |||||||
13617970-C-A | 11462294-C-A | ** | |||||||
14462776-C-A | 12342049-C-A | ** | |||||||
8049680-C-A | 8181639-C-A | Y85707 | ** | ||||||
23439886-A-T | 21278000-A-T | ** | |||||||
2906857-C-A | 3038816-C-A | ** | |||||||
21238219-C-A | 19076333-C-A | ** | |||||||
14715490-C-A | 12603557-C-A | ** | |||||||
19416728-C-A | 17304848-C-A | ** | |||||||
10892540-T-C | FT435718 | ** | |||||||
19168618-C-A | 17056738-C-A | ** | |||||||
14858656-A-T | 12746722-A-T | ** | |||||||
11650500-C-A | ** | ||||||||
13571127-G-T | 11415451-G-T | ** | |||||||
21201160-C-A | 19039274-C-A | ** | |||||||
17380639-C-A | 15268759-C-A | ** | |||||||
28460992-C-A | 26314845-C-A | ** | |||||||
10033946-C-A | 10196337-C-A | ** | |||||||
15278958-C-A | 13167057-C-A | ** | |||||||
23205102-C-A | 21043216-C-A | ** | |||||||
6509353-C-A | 6641312-C-A | ** | |||||||
16037203-C-A | 13925323-C-A | FT1915 | ** | ||||||
10790486-T-C | FT178537 | ** | |||||||
14227560-C-A | 12106854-C-A | ** | |||||||
22171487-G-T | 20009601-G-T | ** | |||||||
17486276-C-A | 15374396-C-A | ** | |||||||
7162942-C-A | 7294901-C-A | ** | |||||||
10690775-C-G | ** | ||||||||
14755682-C-A | 12643751-C-A | ** | |||||||
20332008-C-A | 18170122-C-A | P5_Dst | ** | ||||||
17668259-C-A | 15556379-C-A | FT169760 | ** | ||||||
19415699-C-A | 17303819-C-A | FT403863 | ** | ||||||
2708251-C-A | 2840210-C-A | ** | |||||||
10660922-A-T | ** | ||||||||
10660946-T-A | ** | ||||||||
10964822-G-T | ** | ||||||||
10792411-C-A | ** | ||||||||
10660961-C-G | ** | ||||||||
10660972-C-A | ** | ||||||||
10965101-C-A | ** | ||||||||
10782950-G-C | ** | ||||||||
23475749-T-C | 21313863-T-C | ** | |||||||
26170415-T-A | 24024268-T-A | P1_Y1 | ** | ||||||
15536456-A-G | 13424576-A-G | ** | |||||||
10671306-G-T | ** | ||||||||
23475462-C-A | 21313576-C-A | ** | |||||||
13895215-C-A | 11774509-C-A | ** | |||||||
15276860-T-A | 13164949-T-A | ** | |||||||
22816187-C-T | 20654301-C-T | ** | |||||||
17928102-GT-G | 15816222-GT-G | 9×T | ** | ||||||
14858657-A-T | 12746723-A-T | ** | |||||||
19088010-C-A | 16976130-C-A | ** | |||||||
15746257-C-A | 13634377-C-A | ** | |||||||
15495282-C-A | 13383402-C-A | ** | |||||||
56844183-G-T | ** | ||||||||
3950918-C-A | 4082877-C-A | ** | |||||||
17056778-T-C | 14944898-T-C | ** | |||||||
18480352-A-C | 16368472-A-C | P6_Dst | ** | ||||||
7114740-G-T | 7246699-G-T | ** | |||||||
10778276-C-T | ** | ||||||||
6582917-C-A | 6714876-C-A | ** | |||||||
5824136-C-A | 5956095-C-A | ** | |||||||
15605515-C-A | 13493635-C-A | ** | |||||||
24877543-C-T | 22731396-C-T | g1 | ** | ||||||
5471840-C-A | 5603799-C-A | ** | |||||||
16462722-G-T | 14350842-G-T | ** | |||||||
13960666-C-A | 11839960-C-A | ** | |||||||
23364209-C-A | 21202323-C-A | ** | |||||||
17831020-TA-T | 15719140-TA-T | 8×A | ** | ||||||
8855350-C-A | 8987309-C-A | ** | |||||||
13937100-C-A | 11816394-C-A | ** | |||||||
15832125-C-A | 13720245-C-A | ** | |||||||
20795910-A-AT | 18634024-A-AT | P4_Prx | ** | ||||||
11006821-C-A | ** | ||||||||
23802388-TC-T | 21640502-TC-T | ** | |||||||
4094917-C-A | 4226876-C-A | ** | |||||||
19517240-C-A | 17405360-C-A | ** | |||||||
10944688-T-C | ** | ||||||||
18097799-C-A | 15985919-C-A | ** | |||||||
6147469-A-G | 6279428-A-G | IR3_Dst | ** | ||||||
18951349-C-A | 16839469-C-A | ** | |||||||
8671989-C-A | 8803948-C-A | ** | |||||||
11018277-C-T | ** | ||||||||
28759999-C-A | 26613852-C-A | ** | |||||||
17591897-C-A | 15480017-C-A | ** | |||||||
5447048-C-A | 5579007-C-A | ** | |||||||
7433978-C-A | 7565937-C-A | ** | |||||||
7758491-GTT-G | 7890450-GTT-G | 17×T | ** | ||||||
22816233-G-A | 20654347-G-A | ** | |||||||
19248282-C-A | 17136402-C-A | ** | |||||||
11645507-T-G | FT151685 | ** | |||||||
11645559-A-G | ** | ||||||||
13326714-C-A | 11171038-C-A | ** | |||||||
16165141-GA-G | 14053261-GA-G | P8_Dst | ** | ||||||
15420302-C-A | 13308422-C-A | ** | |||||||
14147939-G-A | 12027233-G-A | ** | |||||||
10778279-T-C | ** | ||||||||
5220957-C-A | 5352916-C-A | ** | |||||||
18847953-C-A | 16736073-C-A | ** | |||||||
24402385-C-A | 22256238-C-A | ** | |||||||
10844193-C-A | ** | ||||||||
28537197-G-A | 26391050-G-A | ** | |||||||
4862855-C-A | 4994814-C-A | ** | |||||||
10844215-T-G | ** | ||||||||
14263273-C-A | 12142567-C-A | ** | |||||||
13469602-T-A | 11313926-T-A | ** | |||||||
21457230-C-A | 19295344-C-A | ** | |||||||
22833727-C-A | 20671841-C-A | ** | |||||||
21435406-C-A | 19273520-C-A | ** | |||||||
16905746-C-A | 14793866-C-A | ** | |||||||
15212609-C-A | 13100695-C-A | ** | |||||||
10821847-C-A | ** | ||||||||
11665880-C-A | ** | ||||||||
10628035-C-A | ** | ||||||||
22816230-G-T | 20654344-G-T | ** | |||||||
3367164-C-A | 3499123-C-A | ** | |||||||
10778336-T-C | ** | ||||||||
22739634-G-A | 20577748-G-A | ** | |||||||
14361989-C-A | 12241284-C-A | ** | |||||||
9144358-G-T | 9306749-G-T | ** | |||||||
20508993-G-GAT | 18347107-G-GAT | P5_Dst | ** | ||||||
17385492-A-G | 15273612-A-G | ** | |||||||
17385499-G-T | 15273619-G-T | ** | |||||||
10778216-G-T | ** | ||||||||
10778234-TC-T | ** | ||||||||
10778238-C-G | ** | ||||||||
10778238-C-CTA | ** | ||||||||
10778240-CA-C | ** | ||||||||
10778297-C-T | ** | ||||||||
2679363-T-C | 2811322-T-C | ** | |||||||
2701311-T-A | 2833270-T-A | ** | |||||||
2759499-C-A | 2891458-C-A | ** | |||||||
2769232-T-C | 2901191-T-C | ** | |||||||
2833238-G-A | 2965197-G-A | ** | |||||||
3016558-A-T | 3148517-A-T | ** | |||||||
3113534-C-A | 3245493-C-A | ** | |||||||
3127603-C-A | 3259562-C-A | ** | |||||||
3284134-G-A | 3416093-G-A | ** | |||||||
3366393-A-T | 3498352-A-T | ** | |||||||
3412039-T-G | 3543998-T-G | ** | |||||||
3424852-C-A | 3556811-C-A | ** | |||||||
3598933-A-G | 3730892-A-G | ** | |||||||
3601348-G-T | 3733307-G-T | ** | |||||||
3640714-T-C | 3772673-T-C | ** | |||||||
3640717-C-T | 3772676-C-T | ** | |||||||
3640729-CT-C | 3772688-CT-C | ** | |||||||
3651382-C-T | 3783341-C-T | ** | |||||||
3728732-G-A | 3860691-G-A | ** | |||||||
3831899-G-T | 3963858-G-T | ** | |||||||
3889514-T-G | 4021473-T-G | ** | |||||||
3950890-C-A | 4082849-C-A | ** | |||||||
4002320-C-A | 4134279-C-A | ** | |||||||
4063452-G-T | 4195411-G-T | ** | |||||||
4072009-C-T | 4203968-C-T | ** | |||||||
4120326-G-T | 4252285-G-T | ** | |||||||
4124151-T-C | 4256110-T-C | ** | |||||||
4171861-C-A | 4303820-C-A | ** | |||||||
4340162-A-T | 4472121-A-T | ** | |||||||
4340179-G-T | 4472138-G-T | ** | |||||||
4554464-C-A | 4686423-C-A | ** | |||||||
4623753-A-T | 4755712-A-T | ** | |||||||
4628965-G-T | 4760924-G-T | ** | |||||||
4769239-C-A | 4901198-C-A | ** | |||||||
4930369-A-G | 5062328-A-G | ** | |||||||
5204562-T-A | 5336521-T-A | ** | |||||||
5367000-C-A | 5498959-C-A | ** | |||||||
5455439-T-C | 5587398-T-C | ** | |||||||
5523941-T-G | 5655900-T-G | ** | |||||||
5523944-GA-G | 5655903-GA-G | ** | |||||||
5523954-T-G | 5655913-T-G | ** | |||||||
5523955-G-T | 5655914-G-T | ** | |||||||
5523963-A-C | 5655922-A-C | ** | |||||||
5654991-C-A | 5786950-C-A | ** | |||||||
5690988-A-T | 5822947-A-T | ** | |||||||
5845053-T-A | 5977012-T-A | ** | |||||||
5845245-A-G | 5977204-A-G | ** | |||||||
6346078-G-T | 6478037-G-T | ** | |||||||
6368464-GT-G | 6500423-GT-G | ** | |||||||
6424847-T-G | 6556806-T-G | ** | |||||||
6509930-T-C | 6641889-T-C | ** | |||||||
6763932-T-G | 6895891-T-G | ** | |||||||
6780681-G-A | 6912640-G-A | ** | |||||||
6833418-C-A | 6965377-C-A | ** | |||||||
7033396-C-A | 7165355-C-A | ** | |||||||
7100291-C-A | 7232250-C-A | ** | |||||||
7109309-C-A | 7241268-C-A | ** | |||||||
7134090-A-G | 7266049-A-G | ** | |||||||
7177036-T-C | 7308995-T-C | ** | |||||||
7196282-C-T | 7328241-C-T | ** | |||||||
7281029-G-T | 7412988-G-T | ** | |||||||
7464030-T-C | 7595989-T-C | IR1_L | ** | ||||||
7613876-C-A | 7745835-C-A | ** | |||||||
7704698-A-T | 7836657-A-T | ** | |||||||
7925048-T-G | 8057007-T-G | ** | |||||||
8072329-C-T | 8204288-C-T | ** | |||||||
8072507-C-T | 8204466-C-T | ** | |||||||
8556287-G-C | 8688246-G-C | ** | |||||||
8671462-C-T | 8803421-C-T | FT20059 | ** | ||||||
8704096-C-A | 8836055-C-A | ** | |||||||
8785628-A-G | 8917587-A-G | ** | |||||||
8785630-A-G | 8917589-A-G | ** | |||||||
8911609-G-T | 9043568-G-T | ** | |||||||
9117187-TA-T | 9279578-TA-T | ** | |||||||
9482534-A-T | 9644925-A-T | ** | |||||||
9887873-A-G | 10050264-A-G | ** | |||||||
9887983-A-C | 10050374-A-C | ** | |||||||
9986250-T-A | 10148641-T-A | ** | |||||||
10026337-G-T | 10188728-G-T | ** | |||||||
10653222-C-A | ** | ||||||||
10655631-C-T | ** | ||||||||
10667024-C-CGCATG | ** | ||||||||
10672170-A-C | ** | ||||||||
10683317-A-T | ** | ||||||||
10683383-C-A | ** | ||||||||
10685308-G-T | ** | ||||||||
10688824-C-A | ** | ||||||||
10690810-A-C | ** | ||||||||
10764482-A-G | ** | ||||||||
10778283-A-C | ** | ||||||||
10778321-C-A | ** | ||||||||
10780038-A-C | ** | ||||||||
10789936-C-T | ** | ||||||||
10815046-A-C | ** | ||||||||
10821863-A-T | ** | ||||||||
10822942-A-T | ** | ||||||||
10823026-A-C | ** | ||||||||
10844155-C-A | ** | ||||||||
10844205-C-CA | ** | ||||||||
10844207-CT-C | ** | ||||||||
10844257-C-T | ** | ||||||||
10865206-G-T | ** | ||||||||
10882399-G-T | ** | ||||||||
10893713-C-A | ** | ||||||||
10894048-C-T | ** | ||||||||
10901788-G-T | ** | ||||||||
10913334-G-T | ** | ||||||||
10922301-CTCCAT-C | ** | ||||||||
10924854-C-A | ** | ||||||||
10925758-C-A | ** | ||||||||
10928790-A-C | ** | ||||||||
10928795-A-C | ** | ||||||||
10928802-T-TC | ** | ||||||||
10928810-AC-A | ** | ||||||||
10934085-C-A | ** | ||||||||
10943450-C-A | ** | ||||||||
10946666-T-C | ** | ||||||||
10963441-T-A | ** | ||||||||
10974272-C-A | ** | ||||||||
10976045-T-C | ** | ||||||||
10976922-C-CCTGTT | ** | ||||||||
10976928-C-CATCCA | ** | ||||||||
10977974-T-C | ** | ||||||||
10978102-C-A | ** | ||||||||
10998895-T-C | ** | ||||||||
11003900-C-A | FT393309 | ** | |||||||
11009198-C-A | ** | ||||||||
11013989-T-A | ** | ||||||||
11018360-A-T | ** | ||||||||
11018390-C-G | ** | ||||||||
13385954-G-A | 11230278-G-A | ** | |||||||
13405234-C-A | 11249558-C-A | ** | |||||||
13643438-A-T | 11487762-A-T | ** | |||||||
11643820-A-C | ** | ||||||||
11645547-G-A | ** | ||||||||
11675077-G-T | ** | ||||||||
13974767-A-T | 11854061-A-T | ** | |||||||
13987231-T-A | 11866525-T-A | ** | |||||||
13992189-C-A | 11871483-C-A | ** | |||||||
13996396-C-A | 11875690-C-A | ** | |||||||
14062005-TTC-T | 11941299-TTC-T | ** | |||||||
14128406-C-A | 12007700-C-A | ** | |||||||
14160256-A-G | 12039550-A-G | ** | |||||||
14196204-C-A | 12075498-C-A | ** | |||||||
14212124-C-A | 12091418-C-A | ** | |||||||
14227783-C-T | 12107077-C-T | ** | |||||||
14240512-T-C | 12119806-T-C | ** | |||||||
14263376-C-A | 12142670-C-A | ** | |||||||
14295162-TC-T | 12174456-TC-T | ** | |||||||
14339269-C-A | 12218564-C-A | ** | |||||||
14382242-CCTG-C | 12261538-CCTG-C | ** | |||||||
14431302-C-A | 12310575-C-A | ** | |||||||
14512447-A-G | 12400652-A-G | ** | |||||||
14697062-G-C | 12585128-G-C | ** | |||||||
14716919-C-A | 12604987-C-A | ** | |||||||
14760916-A-G | 12648985-A-G | ** | |||||||
14799877-C-T | 12687948-C-T | ** | |||||||
14888114-T-C | 12776180-T-C | ** | |||||||
14911868-A-G | 12799935-A-G | ** | |||||||
15061719-T-C | 12949811-T-C | ** | |||||||
15380296-G-A | 13268416-G-A | FTB22811 | ** | ||||||
15406795-C-T | 13294915-C-T | ** | |||||||
15410512-T-A | 13298632-T-A | ** | |||||||
15536409-T-C | 13424529-T-C | ** | |||||||
15536422-T-C | 13424542-T-C | ** | |||||||
15536425-T-C | 13424545-T-C | ** | |||||||
15655580-C-A | 13543700-C-A | ** | |||||||
15696953-G-A | 13585073-G-A | ** | |||||||
15733763-T-A | 13621883-T-A | ** | |||||||
15860119-A-G | 13748239-A-G | ** | |||||||
15995361-A-G | 13883481-A-G | ** | |||||||
16008422-A-G | 13896542-A-G | ** | |||||||
16220768-C-A | 14108888-C-A | ** | |||||||
16267115-A-G | 14155235-A-G | ** | |||||||
16274181-C-A | 14162301-C-A | ** | |||||||
16277820-C-A | 14165940-C-A | ** | |||||||
16278509-C-A | 14166629-C-A | ** | |||||||
16309299-A-G | 14197419-A-G | ** | |||||||
16356051-C-A | 14244171-C-A | ** | |||||||
16437342-C-A | 14325462-C-A | ** | |||||||
16440998-C-A | 14329118-C-A | ** | |||||||
16445854-C-T | 14333974-C-T | ** | |||||||
16605051-C-A | 14493171-C-A | ** | |||||||
16636014-C-A | 14524134-C-A | ** | |||||||
16679420-T-A | 14567540-T-A | ** | |||||||
16738272-C-A | 14626392-C-A | ** | |||||||
16783617-A-T | 14671737-A-T | ** | |||||||
16828785-A-T | 14716905-A-T | ** | |||||||
16834557-C-G | 14722677-C-G | ** | |||||||
16882255-G-T | 14770375-G-T | ** | |||||||
16926914-C-A | 14815034-C-A | ** | |||||||
16945497-A-G | 14833617-A-G | ** | |||||||
17027184-C-A | 14915304-C-A | ** | |||||||
17042980-A-T | 14931100-A-T | ** | |||||||
17183322-C-A | 15071442-C-A | ** | |||||||
17183386-C-A | 15071506-C-A | ** | |||||||
17196450-C-A | 15084570-C-A | ** | |||||||
17319962-A-T | 15208082-A-T | ** | |||||||
17343610-C-A | 15231730-C-A | ** | |||||||
17380571-A-T | 15268691-A-T | ** | |||||||
17385504-G-C | 15273624-G-C | ** | |||||||
17475155-G-T | 15363275-G-T | ** | |||||||
17628180-AC-A | 15516300-AC-A | ** | |||||||
17643779-G-T | 15531899-G-T | ** | |||||||
17666678-AT-A | 15554798-AT-A | ** | |||||||
17788824-A-AAAG | 15676944-A-AAAG | ** | |||||||
17864865-T-C | 15752985-T-C | ** | |||||||
17884553-A-G | 15772673-A-G | ** | |||||||
17903466-G-A | 15791586-G-A | ** | |||||||
17923487-A-G | 15811607-A-G | ** | |||||||
17931865-C-A | 15819985-C-A | ** | |||||||
17946910-TTTTTG-T | 15835030-TTTTTG-T | ** | |||||||
18097817-T-G | 15985937-T-G | ** | |||||||
18127928-C-A | 16016048-C-A | ** | |||||||
18381999-C-A | 16270119-C-A | P6_Gap | ** | ||||||
18503194-T-G | 16391314-T-G | P6_Dst | ** | ||||||
18503210-T-TC | 16391330-T-TC | P6_Dst | ** | ||||||
18503217-G-A | 16391337-G-A | P6_Dst | ** | ||||||
18503226-C-A | 16391346-C-A | P6_Dst | ** | ||||||
18503227-A-T | 16391347-A-T | P6_Dst | ** | ||||||
18688219-T-C | 16576339-T-C | ** | |||||||
18738106-TTC-T | 16626226-TTC-T | ** | |||||||
18926845-C-A | 16814965-C-A | ** | |||||||
18966209-C-A | 16854329-C-A | ** | |||||||
18966942-C-A | 16855062-C-A | ** | |||||||
19049635-C-A | 16937755-C-A | ** | |||||||
19066055-C-A | 16954175-C-A | ** | |||||||
19078923-A-G | 16967043-A-G | ** | |||||||
19107425-G-C | 16995545-G-C | ** | |||||||
19187689-C-A | 17075809-C-A | ** | |||||||
19444206-G-A | 17332326-G-A | FGC69771 | ** | ||||||
19524690-C-A | 17412810-C-A | ** | |||||||
19557359-G-A | 17445479-G-A | ** | |||||||
19646326-T-C | 17534446-T-C | P5_Prx | ** | ||||||
19720891-T-C | 17609011-T-C | P5_Prx | ** | ||||||
19720892-T-G | 17609012-T-G | P5_Prx | ** | ||||||
19720901-A-C | 17609021-A-C | P5_Prx | ** | ||||||
20434763-A-AT | 18272877-A-AT | P5_Dst | ** | ||||||
20652727-T-C | 18490841-T-C | P4_Prx | ** | ||||||
20703188-A-T | 18541302-A-T | P4_Prx | ** | ||||||
20755652-C-T | 18593766-C-T | P4_Prx | ** | ||||||
20795897-G-T | 18634011-G-T | P4_Prx | ** | ||||||
21100463-C-A | 18938577-C-A | ** | |||||||
21187828-G-C | 19025942-G-C | ** | |||||||
21200243-C-A | 19038357-C-A | ** | |||||||
21221045-TG-T | 19059159-TG-T | ** | |||||||
21262550-T-C | 19100664-T-C | FT181991 | ** | ||||||
21275523-A-C | 19113637-A-C | ** | |||||||
21371094-A-G | 19209208-A-G | ** | |||||||
21371633-AT-A | 19209747-AT-A | ** | |||||||
21496375-G-T | 19334489-G-T | ** | |||||||
21498822-A-G | 19336936-A-G | ** | |||||||
21604273-C-A | 19442387-C-A | FT331664 | ** | ||||||
21639072-T-A | 19477186-T-A | ** | |||||||
21891004-G-A | 19729118-G-A | ** | |||||||
21966158-A-G | 19804272-A-G | ** | |||||||
22001818-TA-T | 19839932-TA-T | ** | |||||||
22008557-A-G | 19846671-A-G | ** | |||||||
22010286-C-A | 19848400-C-A | ** | |||||||
22052408-C-A | 19890522-C-A | ** | |||||||
22309940-A-T | 20148054-A-T | DYZ19 | ** | ||||||
22655164-G-A | 20493278-G-A | ** | |||||||
22683585-A-G | 20521699-A-G | ** | |||||||
22696474-G-T | 20534588-G-T | ** | |||||||
22756443-T-C | 20594557-T-C | ** | |||||||
22767307-C-A | 20605421-C-A | ** | |||||||
23004676-A-G | 20842790-A-G | ** | |||||||
23062597-G-A | 20900711-G-A | ** | |||||||
23120786-A-T | 20958900-A-T | ** | |||||||
23120794-G-A | 20958908-G-A | ** | |||||||
23120825-A-G | 20958939-A-G | F25826 | ** | ||||||
23120842-T-C | 20958956-T-C | ** | |||||||
23120847-C-A | 20958961-C-A | ** | |||||||
23120856-A-G | 20958970-A-G | ** | |||||||
23120876-A-G | 20958990-A-G | ** | |||||||
23120888-TC-T | 20959002-TC-T | ** | |||||||
23120921-T-C | 20959035-T-C | ** | |||||||
23120922-G-A | 20959036-G-A | ** | |||||||
23205035-C-A | 21043149-C-A | ** | |||||||
23277423-A-G | 21115537-A-G | ** | |||||||
23316139-C-T | 21154253-C-T | ** | |||||||
23317651-T-TC | 21155765-T-TC | ** | |||||||
23368916-C-A | 21207030-C-A | ** | |||||||
23439865-C-A | 21277979-C-A | ** | |||||||
23482915-G-T | 21321029-G-T | ** | |||||||
23517677-C-A | 21355791-C-A | ** | |||||||
23954989-T-C | 21808842-T-C | ** | |||||||
23997474-G-A | 21851327-G-A | ** | |||||||
24405289-C-T | 22259142-C-T | ** | |||||||
24433408-T-G | 22287261-T-G | ** | |||||||
24466010-G-A | 22319863-G-A | ** | |||||||
24877529-G-T | 22731382-G-T | g1 | ** | ||||||
24877530-A-G | 22731383-A-G | g1 | ** | ||||||
24877539-C-G | 22731392-C-G | g1 | ** | ||||||
25094978-T-A | 22948831-T-A | g1 | ** | ||||||
25546275-G-A | 23400128-G-A | P1_gr1 | ** | ||||||
25733050-TTA-G | 23586903-TTA-G | P1_b3 | ** | ||||||
26154003-C-T | 24007856-C-T | P1_Y1 | ** | ||||||
26170591-G-T | 24024444-G-T | P1_Y1 | ** | ||||||
26400384-C-A | 24254237-C-A | P1_Y1 | ** | ||||||
27546736-T-A | 25400589-T-A | P1_Y2 | ** | ||||||
27596019-C-A | 25449872-C-A | P1_Y2 | ** | ||||||
27963549-TC-T | 25817402-TC-T | P1_Y2 | ** | ||||||
28243702-A-T | 26097555-A-T | P1_b4 | ** | ||||||
28559631-T-A | 26413484-T-A | ** | |||||||
28594213-C-A | 26448066-C-A | ** | |||||||
28610157-C-A | 26464010-C-A | ** | |||||||
28700725-G-C | 26554578-G-C | ** | |||||||
28741107-C-A | 26594960-C-A | ** | |||||||
28791101-T-TA | 26644954-T-TA | ** | |||||||
56828239-C-A | ** | ||||||||
56858707-C-A | ** | ||||||||
56858931-G-A | ** | ||||||||
13664804-G-T | 11509128-G-T | *** | |||||||
13869612-T-G | 11748906-T-G | *** | |||||||
13477336-C-A | 11321660-C-A | *** | |||||||
13810068-C-G | 11689362-C-G | *** | |||||||
13817348-T-G | 11696642-T-G | *** | |||||||
13869108-T-C | 11748402-T-C | A8862 | *** | ||||||
13869225-G-A | 11748519-G-A | *** | |||||||
28813024-T-G | 26666877-T-G | *** | |||||||
58980517-T-C | 56834370-T-C | *** | |||||||
13676743-A-G | 11521067-A-G | *** | |||||||
28796203-GGAATGGAGTGGATTAGAATGGAATTTAATGGAGTGCAGTGGAATT-G | 26650056-GGAATGGAGTGGATTAGAATGGAATTTAATGGAGTGCAGTGGAATT-G | *** | |||||||
28796289-A-G | 26650142-A-G | *** | |||||||
28800184-A-G | 26654037-A-G | *** | |||||||
13140286-T-C | 10629772-T-C | *** | |||||||
13447731-C-A | 11292055-C-A | *** | |||||||
13447737-T-C | 11292061-T-C | *** | |||||||
13851342-G-C | 11730636-G-C | *** | |||||||
13851344-A-G | 11730638-A-G | *** | |||||||
13869147-A-C | 11748441-A-C | *** | |||||||
13869970-T-G | 11749264-T-G | *** | |||||||
58973023-C-T | 56826876-C-T | *** | |||||||
58979255-C-T | 56833108-C-T | *** | |||||||
58982987-T-A | 56836840-T-A | *** | |||||||
13452693-A-T | 11297017-A-T | *** | |||||||
13459338-T-C | 11303662-T-C | *** | |||||||
13805381-C-A | 11684675-C-A | *** | |||||||
13839843-A-G | 11719137-A-G | *** | |||||||
9320580-C-A | 9482971-C-A | *** | |||||||
10026496-T-C | 10188887-T-C | *** | |||||||
13139296-ATTTCATTCAG-A | 10628782-ATTTCATTCAG-A | *** | |||||||
13329344-C-T | 11173668-C-T | *** | |||||||
13406233-GAAC-G | 11250557-GAAC-G | *** | |||||||
13406251-A-T | 11250575-A-T | *** | |||||||
13452707-T-A | 11297031-T-A | *** | |||||||
13452904-C-G | 11297228-C-G | *** | |||||||
13452925-A-T | 11297249-A-T | *** | |||||||
13454172-G-C | 11298496-G-C | *** | |||||||
13455856-TTCCACTGGGTTTGAG-T | 11300180-TTCCACTGGGTTTGAG-T | *** | |||||||
13465922-CA-C | 11310246-CA-C | *** | |||||||
13477316-C-A | 11321640-C-A | *** | |||||||
13485847-A-G | 11330171-A-G | *** | |||||||
13652090-A-G | 11496414-A-G | *** | |||||||
13676619-T-A | 11520943-T-A | *** | |||||||
13676635-G-T | 11520959-G-T | *** | |||||||
13676703-A-G | 11521027-A-G | *** | |||||||
13676729-T-A | 11521053-T-A | *** | |||||||
13693898-A-T | 11538222-A-T | *** | |||||||
13693906-T-C | 11538230-T-C | *** | |||||||
13693913-C-G | 11538237-C-G | *** | |||||||
13693918-G-C | 11538242-G-C | *** | |||||||
13693923-G-C | 11538247-G-C | BY88821 | *** | ||||||
13693927-GCTATCGAATA-G | 11538251-GCTATCGAATA-G | *** | |||||||
13729958-T-A | 11574282-T-A | *** | |||||||
13734800-G-C | 11579124-G-C | *** | |||||||
13801250-A-C | 11680544-A-C | *** | |||||||
13805301-G-A | 11684595-G-A | *** | |||||||
13805380-T-C | 11684674-T-C | *** | |||||||
13810165-CCTCGA-C | 11689459-CCTCGA-C | *** | |||||||
13817262-G-C | 11696556-G-C | *** | |||||||
13817267-C-G | 11696561-C-G | *** | |||||||
13817275-A-G | 11696569-A-G | *** | |||||||
13817277-A-C | 11696571-A-C | *** | |||||||
13817282-C-G | 11696576-C-G | *** | |||||||
13817283-T-G | 11696577-T-G | *** | |||||||
13817292-T-C | 11696586-T-C | *** | |||||||
13817303-C-G | 11696597-C-G | FT221838 | *** | ||||||
13817307-G-C | 11696601-G-C | FT328486 | *** | ||||||
13817313-G-A | 11696607-G-A | *** | |||||||
13817322-G-T | 11696616-G-T | *** | |||||||
13817326-T-C | 11696620-T-C | *** | |||||||
13817328-C-G | 11696622-C-G | *** | |||||||
13817332-G-C | 11696626-G-C | *** | |||||||
13832504-G-GAATGGA | 11711798-G-GAATGGA | *** | |||||||
13868471-T-C | 11747765-T-C | *** | |||||||
13869137-A-G | 11748431-A-G | *** | |||||||
13869226-A-G | 11748520-A-G | *** | |||||||
13869227-A-T | 11748521-A-T | *** | |||||||
13869621-A-C | 11748915-A-C | *** | |||||||
13869980-C-G | 11749274-C-G | *** | |||||||
13870078-A-C | 11749372-A-C | *** | |||||||
13870119-C-T | 11749413-C-T | BY91753 | *** | ||||||
22226735-A-AC | 20064849-A-AC | DYZ19 | *** | ||||||
22249318-T-A | 20087432-T-A | DYZ19 | *** | ||||||
22282063-C-T | 20120177-C-T | DYZ19 | *** | ||||||
22435760-A-T | 20273874-A-T | DYZ19 | *** | ||||||
22511612-A-T | 20349726-A-T | DYZ19 | *** | ||||||
25715355-CT-C | 23569208-CT-C | P1_b3 | 10×T | *** | |||||
25819473-T-TA | 23673326-T-TA | P1_b3 | 11×A | *** | |||||
28786716-A-G | 26640569-A-G | *** | |||||||
58858993-ATTCCATTGGATTACT-A | 56731855-GAATGGAAAGTAATCC-G | *** | |||||||
58973025-A-G | 56826878-A-G | *** | |||||||
58975568-G-A | 56829421-G-A | *** | |||||||
58980617-T-C | 56834470-T-C | *** | |||||||
58980637-T-C | 56834490-T-C | *** | |||||||
15542689-T-G | 13430809-T-G | *** | |||||||
13870074-TG-T | 11749368-TG-T | *** | |||||||
13477319-GC-G | 11321643-GC-G | *** | |||||||
13856303-A-AAATGGAATGG | 11735597-A-AAATGGAATGG | 15×AATGG | *** | ||||||
13652200-GTCAAA-G | 11496524-GTCAAA-G | *** | |||||||
13865759-A-AGAATG | 11745053-A-AGAATG | *** | |||||||
13860134-T-C,G | 11739428-T-C,G | *** | |||||||
5426407-TGA-T | 5558366-TGA-T | *** | |||||||
13940817-C-A | 11820111-C-A | FT300716 | *** | ||||||
19257108-AAT-A | 17145228-AAT-A | 8×AT | *** | ||||||
2753878-C-A | 2885837-C-A | *** | |||||||
13485545-A-G | 11329869-A-G | *** | |||||||
10946703-C-A | *** | ||||||||
16601408-C-T | 14489528-C-T | *** | |||||||
15542686-T-G | 13430806-T-G | *** | |||||||
8321435-C-CTT | 8453394-C-CTT | 15×T | *** | ||||||
18996884-CTT-C,CT | 16885004-CTT-C,CT | 13×T | *** | ||||||
14366621-C-A | 12245916-C-A | *** | |||||||
13466330-C-A | 11310654-C-A | *** | |||||||
13485639-A-C | 11329963-A-C | *** | |||||||
14824140-C-A | 12712207-C-A | *** | |||||||
13958584-CA-C | 11837878-CA-C | 9×A | *** | ||||||
10918345-G-T | *** | ||||||||
2861534-C-A | 2993493-C-A | 25×A | *** | ||||||
18646073-C-A | 16534193-C-A | *** | |||||||
10809525-G-T | *** | ||||||||
16057106-C-A | 13945226-C-A | *** | |||||||
3626282-C-A | 3758241-C-A | *** | |||||||
14109316-C-CTT | 11988610-C-CTT | 14×T | *** | ||||||
14384418-G-T | 12263714-G-T | *** | |||||||
28661632-C-A | 26515485-C-A | *** | |||||||
10777662-T-C | *** | ||||||||
13485633-C-T | 11329957-C-T | *** | |||||||
28429709-AAAC-A | 26283562-AAAC-A | P1_gr2 | 6×AAC | *** | |||||
8140238-C-A | 8272197-C-A | *** | |||||||
14557836-C-A | 12446037-C-A | *** | |||||||
26379231-C-A | 24233084-C-A | P1_Y1 | *** | ||||||
2774697-C-T | 2906656-C-T | *** | |||||||
19060167-C-A | 16948287-C-A | *** | |||||||
15262410-C-A | 13150494-C-A | *** | |||||||
2790457-A-G | 2922416-A-G | 8×T | *** | ||||||
3627591-C-T | 3759550-C-T | *** | |||||||
4240488-C-A | 4372447-C-A | *** | |||||||
9400065-A-G | 9562456-A-G | *** | |||||||
9404386-G-A | 9566777-G-A | *** | |||||||
9773278-A-T | 9935669-A-T | *** | |||||||
10653053-TA-T | *** | ||||||||
10781140-T-C | *** | ||||||||
10916336-A-G | *** | ||||||||
10919295-C-T | *** | ||||||||
10924402-C-A | *** | ||||||||
13485552-C-G | 11329876-C-G | *** | |||||||
14232999-C-A | 12112293-C-A | *** | |||||||
14236026-CAAAAAA-C,CA | 12115320-CAAAAAA-C,CA | 16×A | *** | ||||||
15741701-G-A | 13629821-G-A | *** | |||||||
16016830-A-G | 13904950-A-G | *** | |||||||
16060286-A-G | 13948406-A-G | *** | |||||||
16134293-A-G | 14022413-A-G | *** | |||||||
16205677-A-AATAT | 14093797-A-AATAT | *** | |||||||
16498093-A-C | 14386213-A-C | *** | |||||||
18854303-C-A | 16742423-C-A | *** | |||||||
21185187-C-A | 19023301-C-A | *** | |||||||
21383419-G-T | 19221533-G-T | *** | |||||||
21476545-C-A | 19314659-C-A | *** | |||||||
22996055-A-T | 20834169-A-T | *** | |||||||
23049191-T-C | 20887305-T-C | *** | |||||||
23205227-C-A | 21043341-C-A | *** | |||||||
23264010-G-A | 21102124-G-A | *** | |||||||
24124358-G-T | 21978211-G-T | P3_b1 | *** | ||||||
24671159-A-G | 22525012-A-G | P3_b2 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.