1k Genomes

1kG: HGDP01029
MDKA Birth: Namibia

Tree Position

A0-T-YP2191 > P305[A1] > A1b > A1b1 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STR1kG
HGDP01029
hg19:Y:22462544-G-T hg38:Y:20300658-G-T Y45382BY160879 DYZ19 +
hg19:Y:9042700-C-T hg38:Y:9205091-C-T M11168 Y+
hg19:Y:17971871-C-T hg38:Y:15859991-C-T M11461 YY+
hg19:Y:23059544-A-T hg38:Y:20897658-A-T M11679 L974 YY+
hg19:Y:25312295-G-A hg38:Y:23166148-G-A FGC59263 P2_r1 +
hg19:Y:7096454-G-A hg38:Y:7228413-G-A M11059 V139 YY+
hg19:Y:7096457-A-T hg38:Y:7228416-A-T V141 M11060 YY+
hg19:Y:22233933-C-T hg38:Y:20072047-C-T DYZ19 +
hg19:Y:2778617-C-A hg38:Y:2910576-C-A V188 M11018 YY+
hg19:Y:19427963-A-C hg38:Y:17316083-A-C Y26808 Y+
hg19:Y:15292170-G-T hg38:Y:13180269-G-T Y+
hg19:Y:18575051-G-A hg38:Y:16463171-G-A CTS8949CTS8949 M10782 YY+
hg19:Y:6392673-A-G hg38:Y:6524632-A-G +
hg19:Y:6450951-G-A hg38:Y:6582910-G-A +
hg19:Y:6955809-T-G hg38:Y:7087768-T-G M11047 YY+
hg19:Y:7249337-T-C hg38:Y:7381296-T-C M11068 YY+
hg19:Y:7249339-T-C hg38:Y:7381298-T-C M11069 YY+
hg19:Y:8653633-C-T hg38:Y:8785592-C-T M11147 YY+
hg19:Y:13363626-T-C hg38:Y:11207950-T-C +
hg19:Y:14688657-C-T hg38:Y:12576723-C-T M11250 Y+
hg19:Y:16972480-C-CA hg38:Y:14860600-C-CA 8×A+
hg19:Y:22669438-C-T hg38:Y:20507552-C-T L973 M11652 YY+
hg19:Y:23761419-T-C hg38:Y:21599533-T-C M11786 Y+
hg19:Y:22233716-G-A hg38:Y:20071830-G-A DYZ19 +
hg19:Y:8083948-C-T hg38:Y:8215907-C-T M10730M10730 YY+
hg19:Y:59019548-AC-A hg38:Y:56873401-AC-A +
hg19:Y:2649757-T-C hg38:Y:2781716-T-C Y+
hg19:Y:2653037-A-G hg38:Y:2784996-A-G Y25015 Y+
hg19:Y:2690677-C-A hg38:Y:2822636-C-A V192 M10831 YY+
hg19:Y:2694574-CT-C hg38:Y:2826533-CT-C +
hg19:Y:2700471-C-T hg38:Y:2832430-C-T M11014 V1003 YY+
hg19:Y:2710494-T-G hg38:Y:2842453-T-G L949 M11016 V1011 YY+
hg19:Y:2716169-G-A hg38:Y:2848128-G-A M10715 YY+
hg19:Y:2740899-T-G hg38:Y:2872858-T-G M11017 V1050 YY+
hg19:Y:2753086-G-A hg38:Y:2885045-G-A V198 YY+
hg19:Y:2762835-T-C hg38:Y:2894794-T-C M10716 YY+
hg19:Y:2782815-G-C hg38:Y:2914774-G-C V200 M11019 YY+
hg19:Y:2794478-G-C hg38:Y:2926437-G-C M10832 V1065 YY+
hg19:Y:2803522-A-G hg38:Y:2935481-A-G PH50 V1076 YY+
hg19:Y:2857653-T-A hg38:Y:2989612-T-A M11022 Y+
hg19:Y:2857659-A-G hg38:Y:2989618-A-G M10833 Y+
hg19:Y:2857661-T-C hg38:Y:2989620-T-C M10834 Y+
hg19:Y:2869984-G-C hg38:Y:3001943-G-C M11023 YY+
hg19:Y:2874727-C-A hg38:Y:3006686-C-A M10835 V1142 YY+
hg19:Y:2887888-C-G hg38:Y:3019847-C-G M10836 L1173 YY+
hg19:Y:2911247-G-A hg38:Y:3043206-G-A M11024 YY+
hg19:Y:2945141-G-A hg38:Y:3077100-G-A FT254003 +
hg19:Y:2958181-A-T hg38:Y:3090140-A-T FT254006 +
hg19:Y:2972184-A-G hg38:Y:3104143-A-G FT254009 +
hg19:Y:3002291-T-C hg38:Y:3134250-T-C +
hg19:Y:3018481-A-G hg38:Y:3150440-A-G +
hg19:Y:3027003-C-T hg38:Y:3158962-C-T FT254014 +
hg19:Y:3028557-T-C hg38:Y:3160516-T-C +
hg19:Y:3041057-A-G hg38:Y:3173016-A-G +
hg19:Y:3065806-C-T hg38:Y:3197765-C-T FT254018 +
hg19:Y:3091386-C-T hg38:Y:3223345-C-T FT254024 +
hg19:Y:3101393-TC-T hg38:Y:3233352-TC-T +
hg19:Y:3112901-AAAAAT-A hg38:Y:3244860-AAAAAT-A +
hg19:Y:3119132-A-G hg38:Y:3251091-A-G +
hg19:Y:3158976-A-T hg38:Y:3290935-A-T Y25016 6×AAT+
hg19:Y:3195233-TGTAG-T hg38:Y:3327192-TGTAG-T +
hg19:Y:3203800-C-T hg38:Y:3335759-C-T +
hg19:Y:3208499-G-T hg38:Y:3340458-G-T +
hg19:Y:3223148-C-G hg38:Y:3355107-C-G FT254035 +
hg19:Y:3234413-C-T hg38:Y:3366372-C-T FT254037 +
hg19:Y:3249347-A-C hg38:Y:3381306-A-C FT254041 +
hg19:Y:3263106-A-C hg38:Y:3395065-A-C FT254042 +
hg19:Y:3271316-T-G hg38:Y:3403275-T-G Y25017 +
hg19:Y:3294250-C-T hg38:Y:3426209-C-T FT254044 +
hg19:Y:3300383-CAA-C hg38:Y:3432342-CAA-C +
hg19:Y:3342542-T-G hg38:Y:3474501-T-G +
hg19:Y:3349586-G-A hg38:Y:3481545-G-A +
hg19:Y:3369218-T-G hg38:Y:3501177-T-G FT254051 +
hg19:Y:3374165-C-A hg38:Y:3506124-C-A +
hg19:Y:3381002-C-G hg38:Y:3512961-C-G +
hg19:Y:3385911-G-C hg38:Y:3517870-G-C FT254052 +
hg19:Y:3394113-A-G hg38:Y:3526072-A-G Y25018 +
hg19:Y:3434052-C-G hg38:Y:3566011-C-G FT254053 +
hg19:Y:3435315-A-G hg38:Y:3567274-A-G FT254054 +
hg19:Y:3477258-C-T hg38:Y:3609217-C-T +
hg19:Y:3479742-A-T hg38:Y:3611701-A-T FT254056 +
hg19:Y:3489039-A-G hg38:Y:3620998-A-G FT254057 +
hg19:Y:3516019-G-A hg38:Y:3647978-G-A FT254061 +
hg19:Y:3525879-G-A hg38:Y:3657838-G-A +
hg19:Y:3530420-T-C hg38:Y:3662379-T-C Y25019 +
hg19:Y:3550055-C-A hg38:Y:3682014-C-A FT254062 +
hg19:Y:3553001-C-A hg38:Y:3684960-C-A FT254064 +
hg19:Y:3559259-G-A hg38:Y:3691218-G-A +
hg19:Y:3645344-T-C hg38:Y:3777303-T-C FT254079 +
hg19:Y:3647600-A-C hg38:Y:3779559-A-C +
hg19:Y:3655602-G-A hg38:Y:3787561-G-A +
hg19:Y:3662639-A-G hg38:Y:3794598-A-G Y25020 +
hg19:Y:3669827-C-T hg38:Y:3801786-C-T +
hg19:Y:3686282-T-C hg38:Y:3818241-T-C FT254083 +
hg19:Y:3703834-G-A hg38:Y:3835793-G-A +
hg19:Y:3704441-G-T hg38:Y:3836400-G-T +
hg19:Y:3730618-A-G hg38:Y:3862577-A-G FT254091 +
hg19:Y:3766643-T-G hg38:Y:3898602-T-G Y60572 +
hg19:Y:3769219-A-G hg38:Y:3901178-A-G +
hg19:Y:3777327-G-T hg38:Y:3909286-G-T +
hg19:Y:3807915-A-C hg38:Y:3939874-A-C FT254099 +
hg19:Y:3812992-T-C hg38:Y:3944951-T-C Y25021 +
hg19:Y:3813709-A-C hg38:Y:3945668-A-C +
hg19:Y:3828366-T-C hg38:Y:3960325-T-C +
hg19:Y:3845697-T-C hg38:Y:3977656-T-C +
hg19:Y:3867126-C-T hg38:Y:3999085-C-T +
hg19:Y:3875381-T-C hg38:Y:4007340-T-C FT254105 +
hg19:Y:3895724-G-T hg38:Y:4027683-G-T +
hg19:Y:3896943-T-C hg38:Y:4028902-T-C +
hg19:Y:3919652-CA-C hg38:Y:4051611-CA-C +
hg19:Y:3927272-T-C hg38:Y:4059231-T-C +
hg19:Y:3937012-G-C hg38:Y:4068971-G-C FT254111 +
hg19:Y:3937630-T-A hg38:Y:4069589-T-A FT254112 +
hg19:Y:3945006-G-T hg38:Y:4076965-G-T FT254116 +
hg19:Y:3952997-C-T hg38:Y:4084956-C-T FT254119 +
hg19:Y:3958495-T-G hg38:Y:4090454-T-G FT254120 +
hg19:Y:3967216-G-T hg38:Y:4099175-G-T +
hg19:Y:3974781-G-A hg38:Y:4106740-G-A FT254121 +
hg19:Y:3980992-C-T hg38:Y:4112951-C-T FT254122 +
hg19:Y:3985170-T-A hg38:Y:4117129-T-A FT85765 +
hg19:Y:3986075-G-A hg38:Y:4118034-G-A +
hg19:Y:3986084-A-C hg38:Y:4118043-A-C FGC65580 +
hg19:Y:3993508-C-T hg38:Y:4125467-C-T +
hg19:Y:3994438-G-T hg38:Y:4126397-G-T +
hg19:Y:3999001-G-C hg38:Y:4130960-G-C BY56970FT225732 +
hg19:Y:4012032-G-A hg38:Y:4143991-G-A +
hg19:Y:4028318-C-T hg38:Y:4160277-C-T +
hg19:Y:4046421-T-G hg38:Y:4178380-T-G +
hg19:Y:4060147-G-A hg38:Y:4192106-G-A FGC69817 +
hg19:Y:4080728-G-C hg38:Y:4212687-G-C Y25022 +
hg19:Y:4088729-T-C hg38:Y:4220688-T-C FT254133 +
hg19:Y:4102547-A-G hg38:Y:4234506-A-G +
hg19:Y:4119198-G-A hg38:Y:4251157-G-A +
hg19:Y:4119955-A-C hg38:Y:4251914-A-C +
hg19:Y:4126220-CA-C hg38:Y:4258179-CA-C +
hg19:Y:4127505-T-C hg38:Y:4259464-T-C +
hg19:Y:4134316-C-T hg38:Y:4266275-C-T FT254135 +
hg19:Y:4147843-C-T hg38:Y:4279802-C-T FT254137 +
hg19:Y:4152689-T-C hg38:Y:4284648-T-C FT254138 +
hg19:Y:4153479-G-A hg38:Y:4285438-G-A +
hg19:Y:4182110-T-C hg38:Y:4314069-T-C +
hg19:Y:4188097-G-T hg38:Y:4320056-G-T +
hg19:Y:4198607-C-G hg38:Y:4330566-C-G Y25023 +
hg19:Y:4211948-A-G hg38:Y:4343907-A-G FT254150 +
hg19:Y:4250812-G-C hg38:Y:4382771-G-C FT254153 +
hg19:Y:4262406-A-G hg38:Y:4394365-A-G +
hg19:Y:4288633-C-A hg38:Y:4420592-C-A +
hg19:Y:4302397-A-G hg38:Y:4434356-A-G +
hg19:Y:4315000-G-A hg38:Y:4446959-G-A +
hg19:Y:4317551-A-C hg38:Y:4449510-A-C FT254170 +
hg19:Y:4349463-T-C hg38:Y:4481422-T-C FT254176 +
hg19:Y:4366124-A-C hg38:Y:4498083-A-C +
hg19:Y:4369113-C-T hg38:Y:4501072-C-T FT254177 +
hg19:Y:4382323-G-A hg38:Y:4514282-G-A FT254178 +
hg19:Y:4385546-C-T hg38:Y:4517505-C-T +
hg19:Y:4393097-A-G hg38:Y:4525056-A-G +
hg19:Y:4393938-C-T hg38:Y:4525897-C-T FT254182 +
hg19:Y:4428947-G-A hg38:Y:4560906-G-A +
hg19:Y:4439949-C-T hg38:Y:4571908-C-T Y25024 +
hg19:Y:4441893-A-T hg38:Y:4573852-A-T +
hg19:Y:4443823-T-C hg38:Y:4575782-T-C BY160983 +
hg19:Y:4444424-C-T hg38:Y:4576383-C-T FT254189 +
hg19:Y:4446245-A-G hg38:Y:4578204-A-G Y26769 +
hg19:Y:4462094-C-T hg38:Y:4594053-C-T +
hg19:Y:4464824-G-A hg38:Y:4596783-G-A FT254192 +
hg19:Y:4495818-A-G hg38:Y:4627777-A-G FT254195 +
hg19:Y:4502420-C-G hg38:Y:4634379-C-G +
hg19:Y:4502606-C-T hg38:Y:4634565-C-T FT88573 +
hg19:Y:4522282-T-G hg38:Y:4654241-T-G FT254200 +
hg19:Y:4527357-T-A hg38:Y:4659316-T-A +
hg19:Y:4527709-T-G hg38:Y:4659668-T-G +
hg19:Y:4527952-A-G hg38:Y:4659911-A-G +
hg19:Y:4530481-A-G hg38:Y:4662440-A-G +
hg19:Y:4556163-G-C hg38:Y:4688122-G-C +
hg19:Y:4556315-C-T hg38:Y:4688274-C-T FT254202 +
hg19:Y:4563666-C-T hg38:Y:4695625-C-T +
hg19:Y:4564523-T-C hg38:Y:4696482-T-C +
hg19:Y:4628729-T-G hg38:Y:4760688-T-G FT254216 +
hg19:Y:4629637-G-C hg38:Y:4761596-G-C FT254217 +
hg19:Y:4633625-A-T hg38:Y:4765584-A-T FT254218 +
hg19:Y:4638645-A-G hg38:Y:4770604-A-G +
hg19:Y:4651310-A-G hg38:Y:4783269-A-G FT254219 +
hg19:Y:4667728-G-GA hg38:Y:4799687-G-GA +
hg19:Y:4671966-C-T hg38:Y:4803925-C-T BY160984 +
hg19:Y:4687774-G-A hg38:Y:4819733-G-A BY160985 +
hg19:Y:4697342-G-A hg38:Y:4829301-G-A FT166221 +
hg19:Y:4716103-C-T hg38:Y:4848062-C-T +
hg19:Y:4734805-A-T hg38:Y:4866764-A-T +
hg19:Y:4747311-C-T hg38:Y:4879270-C-T FT254232 +
hg19:Y:4780973-C-A hg38:Y:4912932-C-A +
hg19:Y:4788518-T-C hg38:Y:4920477-T-C +
hg19:Y:4796965-G-A hg38:Y:4928924-G-A FT254234 +
hg19:Y:4800808-C-T hg38:Y:4932767-C-T Y26771 +
hg19:Y:4814034-G-A hg38:Y:4945993-G-A +
hg19:Y:4831806-C-T hg38:Y:4963765-C-T +
hg19:Y:4843955-T-G hg38:Y:4975914-T-G +
hg19:Y:4857619-A-G hg38:Y:4989578-A-G FTA44162 +
hg19:Y:4857810-A-G hg38:Y:4989769-A-G +
hg19:Y:4865651-C-T hg38:Y:4997610-C-T FTA33676 +
hg19:Y:4901947-CCTT-C hg38:Y:5033906-CCTT-C +
hg19:Y:4937282-A-C hg38:Y:5069241-A-C FT241474 +
hg19:Y:5030425-T-G hg38:Y:5162384-T-G FT254254 +
hg19:Y:5030489-A-G hg38:Y:5162448-A-G +
hg19:Y:5034242-A-G hg38:Y:5166201-A-G FT254255 +
hg19:Y:5068889-A-G hg38:Y:5200848-A-G +
hg19:Y:5069242-T-C hg38:Y:5201201-T-C +
hg19:Y:5083526-A-C hg38:Y:5215485-A-C FT254262 +
hg19:Y:5088676-T-A hg38:Y:5220635-T-A +
hg19:Y:5096403-C-G hg38:Y:5228362-C-G FT254264 +
hg19:Y:5117282-G-C hg38:Y:5249241-G-C +
hg19:Y:5129543-G-C hg38:Y:5261502-G-C +
hg19:Y:5130247-A-G hg38:Y:5262206-A-G +
hg19:Y:5164709-T-C hg38:Y:5296668-T-C +
hg19:Y:5164802-G-A hg38:Y:5296761-G-A FT254276 +
hg19:Y:5185879-G-A hg38:Y:5317838-G-A +
hg19:Y:5206116-A-G hg38:Y:5338075-A-G FT254280 +
hg19:Y:5223293-ACT-A hg38:Y:5355252-ACT-A +
hg19:Y:5257317-T-G hg38:Y:5389276-T-G +
hg19:Y:5318372-A-AT hg38:Y:5450331-A-AT +
hg19:Y:5353785-A-G hg38:Y:5485744-A-G +
hg19:Y:5361202-A-G hg38:Y:5493161-A-G Y26775 +
hg19:Y:5410195-T-A hg38:Y:5542154-T-A Y26776 +
hg19:Y:5421502-C-A hg38:Y:5553461-C-A +
hg19:Y:5423394-A-G hg38:Y:5555353-A-G +
hg19:Y:5428441-T-C hg38:Y:5560400-T-C FT254308 +
hg19:Y:5445002-G-A hg38:Y:5576961-G-A FT254311 +
hg19:Y:5469225-C-T hg38:Y:5601184-C-T +
hg19:Y:5472776-C-T hg38:Y:5604735-C-T FT173394 +
hg19:Y:5488320-T-G hg38:Y:5620279-T-G +
hg19:Y:5513645-C-G hg38:Y:5645604-C-G +
hg19:Y:5515030-G-C hg38:Y:5646989-G-C FT254318 +
hg19:Y:5522096-A-G hg38:Y:5654055-A-G +
hg19:Y:5532757-C-T hg38:Y:5664716-C-T +
hg19:Y:5559840-C-T hg38:Y:5691799-C-T FT254325 +
hg19:Y:5589080-T-C hg38:Y:5721039-T-C +
hg19:Y:5607579-T-C hg38:Y:5739538-T-C FT254332 +
hg19:Y:5608430-G-C hg38:Y:5740389-G-C +
hg19:Y:5619111-A-G hg38:Y:5751070-A-G +
hg19:Y:5630308-T-C hg38:Y:5762267-T-C +
hg19:Y:5651092-T-A hg38:Y:5783051-T-A FT254337 +
hg19:Y:5689943-G-A hg38:Y:5821902-G-A +
hg19:Y:5713876-T-C hg38:Y:5845835-T-C +
hg19:Y:5719498-C-T hg38:Y:5851457-C-T FT254348 +
hg19:Y:5724675-A-G hg38:Y:5856634-A-G +
hg19:Y:5725787-GT-G hg38:Y:5857746-GT-G +
hg19:Y:5735316-G-T hg38:Y:5867275-G-T FT254351 +
hg19:Y:5739064-T-G hg38:Y:5871023-T-G FT17956 +
hg19:Y:5758579-C-A hg38:Y:5890538-C-A +
hg19:Y:5758950-G-A hg38:Y:5890909-G-A +
hg19:Y:5781708-G-A hg38:Y:5913667-G-A +
hg19:Y:5807213-T-A hg38:Y:5939172-T-A +
hg19:Y:5827650-C-T hg38:Y:5959609-C-T +
hg19:Y:5839570-T-C hg38:Y:5971529-T-C FT254358 +
hg19:Y:5851520-A-G hg38:Y:5983479-A-G +
hg19:Y:5864476-A-C hg38:Y:5996435-A-C +
hg19:Y:5886414-C-T hg38:Y:6018373-C-T Y26778 +
hg19:Y:5894980-G-A hg38:Y:6026939-G-A +
hg19:Y:5901796-G-C hg38:Y:6033755-G-C FT254367 +
hg19:Y:5919027-A-G hg38:Y:6050986-A-G +
hg19:Y:5957611-A-G hg38:Y:6089570-A-G +
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hg19:Y:23030929-G-C hg38:Y:20869043-G-C M11676 YY+
hg19:Y:23031791-C-T hg38:Y:20869905-C-T M11677 YY+
hg19:Y:23033631-T-C hg38:Y:20871745-T-C PH5314 YY+
hg19:Y:23053603-G-A hg38:Y:20891717-G-A M10998 YY+
hg19:Y:23058088-T-C hg38:Y:20896202-T-C M11678 YY+
hg19:Y:23078222-C-T hg38:Y:20916336-C-T M11680 Y+
hg19:Y:23079807-C-A hg38:Y:20917921-C-A M10815 YY+
hg19:Y:23080525-C-A hg38:Y:20918639-C-A M11681 S25108 YY+
hg19:Y:23085014-A-T hg38:Y:20923128-A-T M11682 Y+
hg19:Y:23101478-G-A hg38:Y:20939592-G-A M11683 Y+
hg19:Y:23107448-T-C hg38:Y:20945562-T-C M11000 Y+
hg19:Y:23109710-G-T hg38:Y:20947824-G-T M10816 Y+
hg19:Y:23115277-A-G hg38:Y:20953391-A-G M11001 DC546 YY+
hg19:Y:23127663-A-T hg38:Y:20965777-A-T M11684 YY+
hg19:Y:23130483-G-T hg38:Y:20968597-G-T M10817 YY+
hg19:Y:23133273-A-G hg38:Y:20971387-A-G M11685 YY+
hg19:Y:23141107-C-T hg38:Y:20979221-C-T M11687 YY+
hg19:Y:23145594-A-T hg38:Y:20983708-A-T M11688 YY+
hg19:Y:23157857-C-T hg38:Y:20995971-C-T Y25065 Y+
hg19:Y:23166016-G-A hg38:Y:21004130-G-A Y25066 Y+
hg19:Y:23187098-G-A hg38:Y:21025212-G-A Y25067 Y+
hg19:Y:23191906-A-G hg38:Y:21030020-A-G PH5348 Y+
hg19:Y:23193538-A-G hg38:Y:21031652-A-G Y+
hg19:Y:23198194-G-A hg38:Y:21036308-G-A Y25068 Y+
hg19:Y:23199151-T-C hg38:Y:21037265-T-C Y25069 Y+
hg19:Y:23200016-G-A hg38:Y:21038130-G-A FT390756 Y+
hg19:Y:23209397-C-G hg38:Y:21047511-C-G Y+
hg19:Y:23212591-G-A hg38:Y:21050705-G-A Y+
hg19:Y:23225647-C-T hg38:Y:21063761-C-T PH5374 Y+
hg19:Y:23226798-G-A hg38:Y:21064912-G-A Y+
hg19:Y:23239117-T-C hg38:Y:21077231-T-C Y+
hg19:Y:23239514-C-T hg38:Y:21077628-C-T Y25070 Y+
hg19:Y:23244761-G-C hg38:Y:21082875-G-C M11689 YY+
hg19:Y:23253526-G-A hg38:Y:21091640-G-A M11690 YY+
hg19:Y:23260092-G-C hg38:Y:21098206-G-C M11002 YY+
hg19:Y:23276487-A-G hg38:Y:21114601-A-G M10818 YY+
hg19:Y:23293047-G-A hg38:Y:21131161-G-A M11693 L976 YY+
hg19:Y:23306846-T-C hg38:Y:21144960-T-C M11694 YY+
hg19:Y:23319878-T-G hg38:Y:21157992-T-G M11696 Y+
hg19:Y:23345003-A-C hg38:Y:21183117-A-C M11003 YY+
hg19:Y:23345407-G-A hg38:Y:21183521-G-A M11697 YY+
hg19:Y:23347973-C-T hg38:Y:21186087-C-T M11698 YY+
hg19:Y:23353264-C-G hg38:Y:21191378-C-G M11699 YY+
hg19:Y:23360075-T-A hg38:Y:21198189-T-A M11004 YY+
hg19:Y:23363484-C-T hg38:Y:21201598-C-T M10819 Y+
hg19:Y:23373148-A-G hg38:Y:21211262-A-G M11700 Y+
hg19:Y:23400107-A-G hg38:Y:21238221-A-G M11701 Y+
hg19:Y:23418643-A-C hg38:Y:21256757-A-C M11702 YY+
hg19:Y:23430325-T-C hg38:Y:21268439-T-C M11005 YY+
hg19:Y:23442400-T-G hg38:Y:21280514-T-G M10820 Y+
hg19:Y:23442948-G-A hg38:Y:21281062-G-A M11703 YY+
hg19:Y:23450679-C-G hg38:Y:21288793-C-G M11704 YY+
hg19:Y:23481624-C-T hg38:Y:21319738-C-T M11705 YY+
hg19:Y:23482147-A-T hg38:Y:21320261-A-T M11706 YY+
hg19:Y:23489172-C-T hg38:Y:21327286-C-T M11707 YY+
hg19:Y:23492984-C-T hg38:Y:21331098-C-T BY42464M10821 YY+
hg19:Y:23497256-C-G hg38:Y:21335370-C-G MEH1 YY+
hg19:Y:23497714-G-A hg38:Y:21335828-G-A P4 YY+
hg19:Y:23524664-G-A hg38:Y:21362778-G-A BY163295 YY+
hg19:Y:23526775-T-C hg38:Y:21364889-T-C FGC36684 YY+
hg19:Y:23527418-A-C hg38:Y:21365532-A-C M11708 YY+
hg19:Y:23529087-G-A hg38:Y:21367201-G-A M11709 YY+
hg19:Y:23534353-G-T hg38:Y:21372467-G-T M11710 YY+
hg19:Y:23543484-AC-A hg38:Y:21381598-AC-A +
hg19:Y:23545126-T-C hg38:Y:21383240-T-C M11006 YY+
hg19:Y:23586923-CA-C hg38:Y:21425037-CA-C +
hg19:Y:23589145-GC-G hg38:Y:21427259-GC-G +
hg19:Y:23595537-G-A hg38:Y:21433651-G-A M11711 YY+
hg19:Y:23598273-T-C hg38:Y:21436387-T-C M10822 YY+
hg19:Y:23598613-A-G hg38:Y:21436727-A-G M11007 YY+
hg19:Y:23610402-A-G hg38:Y:21448516-A-G FT390779 YY+
hg19:Y:23612415-C-T hg38:Y:21450529-C-T M11712 L1172 YY+
hg19:Y:23626950-T-C hg38:Y:21465064-T-C M10823 YY+
hg19:Y:23641087-A-T hg38:Y:21479201-A-T Y25071 Y+
hg19:Y:23647992-T-G hg38:Y:21486106-T-G Y25072 Y+
hg19:Y:23729670-C-T hg38:Y:21567784-C-T +
hg19:Y:23755129-A-G hg38:Y:21593243-A-G M11713 Y+
hg19:Y:23763162-G-T hg38:Y:21601276-G-T M11714 Y+
hg19:Y:23776326-G-C hg38:Y:21614440-G-C M11715 Y+
hg19:Y:23784353-G-A hg38:Y:21622467-G-A M11716 Y+
hg19:Y:23800195-A-G hg38:Y:21638309-A-G M10824 Y+
hg19:Y:23802780-T-C hg38:Y:21640894-T-C M11717 Y+
hg19:Y:23807473-G-T hg38:Y:21645587-G-T Y+
hg19:Y:23816098-T-C hg38:Y:21654212-T-C Y+
hg19:Y:23818783-G-A hg38:Y:21656897-G-A M11718 +
hg19:Y:23845973-G-T hg38:Y:21684087-G-T M10825 Y+
hg19:Y:23855516-A-C hg38:Y:21693630-A-C Y+
hg19:Y:23865535-C-T hg38:Y:21703649-C-T M11719 Y+
hg19:Y:23870777-G-C hg38:Y:21708891-G-C M11720 Y+
hg19:Y:23876449-A-C hg38:Y:21714563-A-C M11721 +
hg19:Y:23878831-T-C hg38:Y:21716945-T-C M11722 +
hg19:Y:23881875-A-C hg38:Y:21719989-A-C Y+
hg19:Y:23890036-G-A hg38:Y:21728150-G-A M11008 Y+
hg19:Y:23891127-T-C hg38:Y:21729241-T-C M11009 Y+
hg19:Y:23892485-T-A hg38:Y:21730599-T-A M11723 Y+
hg19:Y:23898604-G-A hg38:Y:21736718-G-A Y26823 +
hg19:Y:23968042-G-T hg38:Y:21821895-G-T M10826 Y+
hg19:Y:23972493-T-G hg38:Y:21826346-T-G M10827 Y+
hg19:Y:24371868-T-G hg38:Y:22225721-T-G Y25073 +
hg19:Y:24373066-C-A hg38:Y:22226919-C-A Y25074 Y+
hg19:Y:24376483-A-T hg38:Y:22230336-A-T M11010 Y+
hg19:Y:24397833-G-T hg38:Y:22251686-G-T M11724 Y+
hg19:Y:24402673-T-C hg38:Y:22256526-T-C M11725 +
hg19:Y:24410960-G-T hg38:Y:22264813-G-T M11726 Y+
hg19:Y:24426436-C-T hg38:Y:22280289-C-T M11727 Y+
hg19:Y:24434591-C-T hg38:Y:22288444-C-T M10713 Y+
hg19:Y:24442306-C-T hg38:Y:22296159-C-T M11728 Y+
hg19:Y:24448800-T-C hg38:Y:22302653-T-C M11729 Y+
hg19:Y:24455364-G-A hg38:Y:22309217-G-A M11011 Y+
hg19:Y:24457999-A-G hg38:Y:22311852-A-G M11730 Y+
hg19:Y:24460278-G-A hg38:Y:22314131-G-A M11731 Y+
hg19:Y:24503721-A-C hg38:Y:22357574-A-C Y25075 +
hg19:Y:24503927-G-A hg38:Y:22357780-G-A Y26824 +
hg19:Y:24875352-C-T hg38:Y:22729205-C-T g1 +
hg19:Y:24893311-A-G hg38:Y:22747164-A-G g1 +
hg19:Y:25497689-C-T hg38:Y:23351542-C-T P2_r2 +
hg19:Y:26467278-T-A hg38:Y:24321131-T-A P1_Y1 +
hg19:Y:27383988-A-T hg38:Y:25237841-A-T P1_g3 +
hg19:Y:27527135-T-C hg38:Y:25380988-T-C P1_Y2 +
hg19:Y:28471718-TTAA-T hg38:Y:26325571-TTAA-T +
hg19:Y:28489058-A-C hg38:Y:26342911-A-C M11012 +
hg19:Y:28498989-T-G hg38:Y:26352842-T-G M10828 +
hg19:Y:28500412-T-TAC hg38:Y:26354265-T-TAC +
hg19:Y:28527039-C-A hg38:Y:26380892-C-A M11732 +
hg19:Y:28535697-T-A hg38:Y:26389550-T-A M11733 +
hg19:Y:28564637-A-G hg38:Y:26418490-A-G Y25077 +
hg19:Y:28577950-T-C hg38:Y:26431803-T-C FT120058 17×AC+
hg19:Y:28597201-T-C hg38:Y:26451054-T-C +
hg19:Y:28599240-T-C hg38:Y:26453093-T-C M11734 +
hg19:Y:28616572-G-C hg38:Y:26470425-G-C M11735 +
hg19:Y:28623974-A-G hg38:Y:26477827-A-G M11736 Y+
hg19:Y:28629128-C-T hg38:Y:26482981-C-T M11737 +
hg19:Y:28639175-G-T hg38:Y:26493028-G-T M11738 +
hg19:Y:28655176-T-G hg38:Y:26509029-T-G M11739 +
hg19:Y:28661247-C-T hg38:Y:26515100-C-T M11740 Y+
hg19:Y:28664489-T-C hg38:Y:26518342-T-C M11741 +
hg19:Y:28674767-C-T hg38:Y:26528620-C-T M10829 +
hg19:Y:28683674-G-T hg38:Y:26537527-G-T M11742 +
hg19:Y:28696558-C-T hg38:Y:26550411-C-T M11743 +
hg19:Y:28711638-A-G hg38:Y:26565491-A-G M10830 Y+
hg19:Y:28714612-G-A hg38:Y:26568465-G-A M11744 +
hg19:Y:28715314-C-T hg38:Y:26569167-C-T M11745 +
hg19:Y:28721445-G-T hg38:Y:26575298-G-T M11746 +
hg19:Y:28722313-T-C hg38:Y:26576166-T-C M11013 +
hg19:Y:28733246-C-T hg38:Y:26587099-C-T M11747 Y+
hg19:Y:28771587-T-A hg38:Y:26625440-T-A Y26827 +
hg19:Y:28788843-T-C hg38:Y:26642696-T-C Y25078 +
hg19:Y:28807817-C-A hg38:Y:26661670-C-A BY227431 +

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.



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