1k Genomes

1kG: HGDP00542

Tree Position

Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STR1kG
HGDP00542
hg19:Y:21834863-A-T hg38:Y:19672977-A-T CTS750Z16369 FGC13408 Y+
hg19:Y:22485708-G-T hg38:Y:20323822-G-T Z31130 DYZ19 +
hg19:Y:16357324-C-CAT hg38:Y:14245444-C-CAT +
hg19:Y:17575999-T-C hg38:Y:15464119-T-C Z31049 Z43402 YY+
hg19:Y:17596639-A-C hg38:Y:15484759-A-C Z31051 YY+
hg19:Y:22784216-C-T hg38:Y:20622330-C-T Y26343 Z42278 YY+
hg19:Y:23196626-TTA-T hg38:Y:21034740-TTA-T +
hg19:Y:23202914-G-A hg38:Y:21041028-G-A Y27843 Y+
hg19:Y:58917666-N-T hg38:Y:56673205-N-A +
hg19:Y:2744628-T-C hg38:Y:2876587-T-C M4 YY+
hg19:Y:2854695-C-G hg38:Y:2986654-C-G Z30839 YY+
hg19:Y:2859636-C-T hg38:Y:2991595-C-T Z30840 YY+
hg19:Y:2865710-C-T hg38:Y:2997669-C-T Z30841 YY+
hg19:Y:2903311-TTCCC-T hg38:Y:3035270-TTCCC-T +
hg19:Y:2926875-A-C hg38:Y:3058834-A-C Z30836 +
hg19:Y:3061430-T-C hg38:Y:3193389-T-C FT172307 +
hg19:Y:3068277-T-C hg38:Y:3200236-T-C FT409 +
hg19:Y:3068491-C-A hg38:Y:3200450-C-A FT410 +
hg19:Y:3072812-C-T hg38:Y:3204771-C-T FT414 +
hg19:Y:3106437-C-T hg38:Y:3238396-C-T +
hg19:Y:3228942-G-A hg38:Y:3360901-G-A Z30842 +
hg19:Y:3239024-A-C hg38:Y:3370983-A-C Z30843 +
hg19:Y:3239325-A-T hg38:Y:3371284-A-T FT464 +
hg19:Y:3256155-G-A hg38:Y:3388114-G-A FT472 +
hg19:Y:3336769-T-A hg38:Y:3468728-T-A Z30844 +
hg19:Y:3392952-T-C hg38:Y:3524911-T-C Z30845 +
hg19:Y:3448410-C-T hg38:Y:3580369-C-T Z30846 +
hg19:Y:3556424-A-T hg38:Y:3688383-A-T FT571 +
hg19:Y:3556568-G-C hg38:Y:3688527-G-C Z30847 +
hg19:Y:3681661-T-C hg38:Y:3813620-T-C Z30848 +
hg19:Y:3775773-T-C hg38:Y:3907732-T-C FT318453 +
hg19:Y:3798851-A-G hg38:Y:3930810-A-G FT671 +
hg19:Y:3821419-C-A hg38:Y:3953378-C-A Z30849 +
hg19:Y:3870497-C-T hg38:Y:4002456-C-T Z30850 +
hg19:Y:3928878-T-C hg38:Y:4060837-T-C Z30851 +
hg19:Y:3944448-A-G hg38:Y:4076407-A-G FT717 +
hg19:Y:3944768-G-T hg38:Y:4076727-G-T +
hg19:Y:4004097-C-T hg38:Y:4136056-C-T Z30853 +
hg19:Y:4005957-A-T hg38:Y:4137916-A-T Z30854 12×T+
hg19:Y:4015394-C-T hg38:Y:4147353-C-T Z30855 +
hg19:Y:4018225-C-G hg38:Y:4150184-C-G Z30856 +
hg19:Y:4042041-T-G hg38:Y:4174000-T-G FT319322 +
hg19:Y:4051502-T-C hg38:Y:4183461-T-C FT319365 +
hg19:Y:4051504-A-T hg38:Y:4183463-A-T FT319366 +
hg19:Y:4086157-A-G hg38:Y:4218116-A-G Z30857 +
hg19:Y:4132353-T-A hg38:Y:4264312-T-A Z30858 +
hg19:Y:4146773-C-A hg38:Y:4278732-C-A FT783 +
hg19:Y:4162678-G-A hg38:Y:4294637-G-A Z30859 +
hg19:Y:4185369-T-G hg38:Y:4317328-T-G Z30860 +
hg19:Y:4213883-T-A hg38:Y:4345842-T-A BY20705FT804 +
hg19:Y:4237143-A-T hg38:Y:4369102-A-T FT319979 +
hg19:Y:4247768-G-A hg38:Y:4379727-G-A Z30861 +
hg19:Y:4250525-A-G hg38:Y:4382484-A-G Z30862 +
hg19:Y:4332481-C-T hg38:Y:4464440-C-T Y26301 +
hg19:Y:4356292-T-C hg38:Y:4488251-T-C FT320379 +
hg19:Y:4364080-C-T hg38:Y:4496039-C-T FT848 +
hg19:Y:4376587-G-A hg38:Y:4508546-G-A +
hg19:Y:4376588-C-T hg38:Y:4508547-C-T +
hg19:Y:4488246-A-G hg38:Y:4620205-A-G Z30863 +
hg19:Y:4550668-A-G hg38:Y:4682627-A-G FT321000 +
hg19:Y:4557968-A-C hg38:Y:4689927-A-C FT321025 +
hg19:Y:4697143-C-T hg38:Y:4829102-C-T FT943 +
hg19:Y:4704073-T-C hg38:Y:4836032-T-C Z30864 +
hg19:Y:4758878-T-G hg38:Y:4890837-T-G FT963 +
hg19:Y:4975952-T-C hg38:Y:5107911-T-C Z30865 +
hg19:Y:5002632-C-T hg38:Y:5134591-C-T FT1050 +
hg19:Y:5007874-A-G hg38:Y:5139833-A-G Z30867 +
hg19:Y:5034342-A-C hg38:Y:5166301-A-C FT322496 +
hg19:Y:5068108-C-T hg38:Y:5200067-C-T Z30868 +
hg19:Y:5100147-T-G hg38:Y:5232106-T-G Z30869 +
hg19:Y:5132118-G-A hg38:Y:5264077-G-A FT1097 +
hg19:Y:5137813-A-G hg38:Y:5269772-A-G Z30870 +
hg19:Y:5152576-A-G hg38:Y:5284535-A-G Z30871 +
hg19:Y:5167160-A-T hg38:Y:5299119-A-T Z30872 +
hg19:Y:5221807-G-A hg38:Y:5353766-G-A Z30873 +
hg19:Y:5258200-G-C hg38:Y:5390159-G-C FT1138 +
hg19:Y:5273520-G-A hg38:Y:5405479-G-A FT323348 +
hg19:Y:5281149-A-G hg38:Y:5413108-A-G Z30874 +
hg19:Y:5365847-C-T hg38:Y:5497806-C-T FT273106 +
hg19:Y:5378105-C-T hg38:Y:5510064-C-T FT323702 +
hg19:Y:5378727-A-G hg38:Y:5510686-A-G FT323703 +
hg19:Y:5390972-C-A hg38:Y:5522931-C-A Z30875 +
hg19:Y:5403094-T-C hg38:Y:5535053-T-C Z30876 +
hg19:Y:5406108-C-T hg38:Y:5538067-C-T FT1182 +
hg19:Y:5482179-A-T hg38:Y:5614138-A-T +
hg19:Y:5496362-A-G hg38:Y:5628321-A-G FT324096 +
hg19:Y:5505803-C-G hg38:Y:5637762-C-G Z30877 +
hg19:Y:5532441-C-T hg38:Y:5664400-C-T FT324219 +
hg19:Y:5532475-T-C hg38:Y:5664434-T-C FT324220 +
hg19:Y:5584240-C-T hg38:Y:5716199-C-T Z30878 +
hg19:Y:5682692-G-A hg38:Y:5814651-G-A Z30879 +
hg19:Y:5694423-A-G hg38:Y:5826382-A-G FT95824 +
hg19:Y:5695516-G-T hg38:Y:5827475-G-T FT1285 +
hg19:Y:5703285-A-G hg38:Y:5835244-A-G FT72847 +
hg19:Y:5703977-T-A hg38:Y:5835936-T-A Z30880 +
hg19:Y:5840810-A-G hg38:Y:5972769-A-G Z30881 +
hg19:Y:5921206-G-T hg38:Y:6053165-G-T FT325507 +
hg19:Y:5953789-G-C hg38:Y:6085748-G-C FT325600 +
hg19:Y:6029894-C-T hg38:Y:6161853-C-T FT1424 +
hg19:Y:6033178-G-A hg38:Y:6165137-G-A FT325913 +
hg19:Y:6049415-A-G hg38:Y:6181374-A-G FT325972 +
hg19:Y:6070457-G-A hg38:Y:6202416-G-A Z30882 +
hg19:Y:6081970-C-T hg38:Y:6213929-C-T FT1458 +
hg19:Y:6371043-A-G hg38:Y:6503002-A-G BY40004 +
hg19:Y:6379093-C-T hg38:Y:6511052-C-T BY40005 +
hg19:Y:6429696-A-G hg38:Y:6561655-A-G Y27849 +
hg19:Y:6433412-G-T hg38:Y:6565371-G-T Z30883 +
hg19:Y:6434599-A-G hg38:Y:6566558-A-G Z30884 +
hg19:Y:6450509-A-G hg38:Y:6582468-A-G Z30885 +
hg19:Y:6473950-G-A hg38:Y:6605909-G-A Z30886 +
hg19:Y:6481813-A-T hg38:Y:6613772-A-T FT326703 +
hg19:Y:6508352-C-T hg38:Y:6640311-C-T FT1505 +
hg19:Y:6533007-G-C hg38:Y:6664966-G-C Z30887 +
hg19:Y:6535588-T-C hg38:Y:6667547-T-C FT326846 +
hg19:Y:6542345-T-C hg38:Y:6674304-T-C Z30888 +
hg19:Y:6578655-T-C hg38:Y:6710614-T-C Z30889 +
hg19:Y:6587143-A-G hg38:Y:6719102-A-G FT326913 +
hg19:Y:6595053-T-C hg38:Y:6727012-T-C Y27828 Z43395 +
hg19:Y:6614444-G-C hg38:Y:6746403-G-C FT326985 +
hg19:Y:6619307-G-C hg38:Y:6751266-G-C Z30890 Y+
hg19:Y:6640547-C-A hg38:Y:6772506-C-A Y27850 Y+
hg19:Y:6662594-A-G hg38:Y:6794553-A-G Z30891 YY+
hg19:Y:6679553-A-G hg38:Y:6811512-A-G Z30892 YY+
hg19:Y:6689680-C-T hg38:Y:6821639-C-T Z30893 YY+
hg19:Y:6706463-G-T hg38:Y:6838422-G-T Z30894 YY+
hg19:Y:6736812-G-T hg38:Y:6868771-G-T PAGES00001 Page1 YY+
hg19:Y:6748654-C-T hg38:Y:6880613-C-T Z30895 YY+
hg19:Y:6795966-G-A hg38:Y:6927925-G-A Z30896 YY+
hg19:Y:6807417-A-C hg38:Y:6939376-A-C Z42285 YY+
hg19:Y:6815542-T-C hg38:Y:6947501-T-C Z30897 YY+
hg19:Y:6827825-G-A hg38:Y:6959784-G-A Z30898 Y+
hg19:Y:6886974-A-G hg38:Y:7018933-A-G Z30899 Z43396 YY+
hg19:Y:6909278-G-C hg38:Y:7041237-G-C Z30900 YY+
hg19:Y:6912648-G-C hg38:Y:7044607-G-C Z30901 YY+
hg19:Y:6940886-C-T hg38:Y:7072845-C-T SK1848SK1848 YY+
hg19:Y:7001380-C-T hg38:Y:7133339-C-T Y26285 Y+
hg19:Y:7008618-C-A hg38:Y:7140577-C-A Z30902 YY+
hg19:Y:7053576-C-T hg38:Y:7185535-C-T Z30903 YY+
hg19:Y:7078921-G-A hg38:Y:7210880-G-A Z30904 YY+
hg19:Y:7131506-T-G hg38:Y:7263465-T-G Z30905 YY+
hg19:Y:7187957-T-G hg38:Y:7319916-T-G FT294801 YY+
hg19:Y:7210843-C-T hg38:Y:7342802-C-T Z30906 Y+
hg19:Y:7244645-A-C hg38:Y:7376604-A-C Z30907 YY+
hg19:Y:7306041-A-G hg38:Y:7438000-A-G Z30908 YY+
hg19:Y:7326477-T-G hg38:Y:7458436-T-G Z30909 YY+
hg19:Y:7386101-T-C hg38:Y:7518060-T-C Z30912 YY+
hg19:Y:7395770-C-T hg38:Y:7527729-C-T Z30914 YY+
hg19:Y:7401903-G-A hg38:Y:7533862-G-A Z30915 YY+
hg19:Y:7405762-T-C hg38:Y:7537721-T-C Z30916 FGC44361 YY+
hg19:Y:7416383-C-A hg38:Y:7548342-C-A Z30917 YY+
hg19:Y:7519846-C-A hg38:Y:7651805-C-A Z42236 Y26302 YY+
hg19:Y:7528865-C-A hg38:Y:7660824-C-A Z42237 Y27852 YY+
hg19:Y:7557145-T-C hg38:Y:7689104-T-C Z30918 YY+
hg19:Y:7583062-C-T hg38:Y:7715021-C-T Y27853 Z42238 YY+
hg19:Y:7598684-T-A hg38:Y:7730643-T-A FT294940 YY+
hg19:Y:7664098-C-T hg38:Y:7796057-C-T Z30919 YY+
hg19:Y:7676637-A-G hg38:Y:7808596-A-G Z42287 YY+
hg19:Y:7680906-C-T hg38:Y:7812865-C-T Z42239 Y26303 YY+
hg19:Y:7707247-G-A hg38:Y:7839206-G-A Z42240 Y27854 YY+
hg19:Y:7731507-A-G hg38:Y:7863466-A-G Z30920 YY+
hg19:Y:7750041-C-T hg38:Y:7882000-C-T Z30921 YY+
hg19:Y:7789873-T-C hg38:Y:7921832-T-C Z30922 YY+
hg19:Y:7794047-T-A hg38:Y:7926006-T-A Z30923 YY+
hg19:Y:7803606-C-A hg38:Y:7935565-C-A Z42241 Y26304 YY+
hg19:Y:7826071-G-A hg38:Y:7958030-G-A Z30924 YY+
hg19:Y:7844929-G-A hg38:Y:7976888-G-A Z30925 YY+
hg19:Y:7870593-A-T hg38:Y:8002552-A-T Z42242 Y26305 YY+
hg19:Y:7982756-AT-A hg38:Y:8114715-AT-A +
hg19:Y:7992575-C-T hg38:Y:8124534-C-T Z30926 YY+
hg19:Y:7999341-A-C hg38:Y:8131300-A-C SK1881 YY+
hg19:Y:8002457-C-T hg38:Y:8134416-C-T Z30927 YY+
hg19:Y:8017791-CA-C hg38:Y:8149750-CA-C +
hg19:Y:8019056-AAAAC-A hg38:Y:8151015-AAAAC-A +
hg19:Y:8022892-G-A hg38:Y:8154851-G-A Z30928 YY+
hg19:Y:8064301-C-T hg38:Y:8196260-C-T Z30929 Y+
hg19:Y:8101772-T-C hg38:Y:8233731-T-C Z30930 YY+
hg19:Y:8177338-TAA-T hg38:Y:8309297-TAA-T +
hg19:Y:8187045-G-T hg38:Y:8319004-G-T Z31189 YY+
hg19:Y:8212218-G-A hg38:Y:8344177-G-A FGC24709 YY+
hg19:Y:8225946-G-A hg38:Y:8357905-G-A Z31190 YY+
hg19:Y:8243993-T-C hg38:Y:8375952-T-C Y26306 Z42243 YY+
hg19:Y:8309974-G-A hg38:Y:8441933-G-A Z31191 YY+
hg19:Y:8320153-T-C hg38:Y:8452112-T-C Z31192 YY+
hg19:Y:8365184-G-A hg38:Y:8497143-G-A Z31193 YY+
hg19:Y:8369453-C-T hg38:Y:8501412-C-T Z31194 YY+
hg19:Y:8369465-T-C hg38:Y:8501424-T-C Z31195 YY+
hg19:Y:8372862-G-A hg38:Y:8504821-G-A Z42244 Y26307 YY+
hg19:Y:8378998-T-C hg38:Y:8510957-T-C Z31196 YY+
hg19:Y:8397901-C-A hg38:Y:8529860-C-A Z30833 YY+
hg19:Y:8417447-C-A hg38:Y:8549406-C-A Y26287 YY+
hg19:Y:8445113-CT-C hg38:Y:8577072-CT-C +
hg19:Y:8480806-G-T hg38:Y:8612765-G-T Z31197 YY+
hg19:Y:8545089-C-T hg38:Y:8677048-C-T SK1877 YY+
hg19:Y:8547532-C-T hg38:Y:8679491-C-T SK1869 YY+
hg19:Y:8630327-G-A hg38:Y:8762286-G-A SK1845 YY+
hg19:Y:8645197-C-T hg38:Y:8777156-C-T Z31198 YY+
hg19:Y:8684095-A-G hg38:Y:8816054-A-G Z30931 YY+
hg19:Y:8685231-G-A hg38:Y:8817190-G-A SK1828 YY+
hg19:Y:8733591-G-A hg38:Y:8865550-G-A Y26308 Z42245 Y+
hg19:Y:8754439-C-T hg38:Y:8886398-C-T BY75644 YY+
hg19:Y:8755344-T-A hg38:Y:8887303-T-A Z30932 YY+
hg19:Y:8789706-T-G hg38:Y:8921665-T-G Z30933 YY+
hg19:Y:8805524-C-T hg38:Y:8937483-C-T SK1870 YY+
hg19:Y:8846070-G-A hg38:Y:8978029-G-A Z30935 YY+
hg19:Y:8858186-G-A hg38:Y:8990145-G-A Z30936 YY+
hg19:Y:8867037-G-A hg38:Y:8998996-G-A Z30937 Y+
hg19:Y:8881443-C-T hg38:Y:9013402-C-T Z30939 Y+
hg19:Y:8893392-C-T hg38:Y:9025351-C-T Z30940 Y+
hg19:Y:9008237-A-C hg38:Y:9170628-A-C FT295637 Y+
hg19:Y:9115317-T-C hg38:Y:9277708-T-C Y26309 Y+
hg19:Y:9376341-CA-C hg38:Y:9538732-CA-C +
hg19:Y:9386587-C-A hg38:Y:9548978-C-A Z30941 Y+
hg19:Y:9391070-G-A hg38:Y:9553461-G-A Z30942 Y+
hg19:Y:9392733-T-A hg38:Y:9555124-T-A Z30943 Y+
hg19:Y:9400716-T-C hg38:Y:9563107-T-C Z30944 YY+
hg19:Y:9402451-A-C hg38:Y:9564842-A-C FT295717 YY+
hg19:Y:9411414-C-T hg38:Y:9573805-C-T Z30945 Y+
hg19:Y:9419261-A-C hg38:Y:9581652-A-C FT295725 YY+
hg19:Y:9472569-A-C hg38:Y:9634960-A-C Z30946 +
hg19:Y:9510955-G-T hg38:Y:9673346-G-T Z30947 +
hg19:Y:9644123-G-A hg38:Y:9806514-G-A Z30948 IR3_Prx +
hg19:Y:9767079-G-T hg38:Y:9929470-G-T Y27830 Y+
hg19:Y:9817653-T-C hg38:Y:9980044-T-C Z30950 YY+
hg19:Y:9823756-A-C hg38:Y:9986147-A-C Z30951 YY+
hg19:Y:9833039-G-A hg38:Y:9995430-G-A Z30952 YY+
hg19:Y:9885801-G-T hg38:Y:10048192-G-T Z30953 YY+
hg19:Y:9887780-T-C hg38:Y:10050171-T-C Z30954 Y+
hg19:Y:9891791-A-T hg38:Y:10054182-A-T Z42246 Y26310 YY+
hg19:Y:9899837-C-A hg38:Y:10062228-C-A Z30955 Y+
hg19:Y:9900206-G-T hg38:Y:10062597-G-T Y27855 Y+
hg19:Y:9918361-T-C hg38:Y:10080752-T-C Z30956 Y+
hg19:Y:9981600-A-C hg38:Y:10143991-A-C Y+
hg19:Y:9994173-G-A hg38:Y:10156564-G-A BY40007 Y+
hg19:Y:10005431-A-C hg38:Y:10167822-A-C Y+
hg19:Y:10007133-C-G hg38:Y:10169524-C-G Z43838 Y+
hg19:Y:10007406-C-T hg38:Y:10169797-C-T FGC29215 Y+
hg19:Y:10021455-C-T hg38:Y:10183846-C-T BY40008 Y+
hg19:Y:10036043-A-C hg38:Y:10198434-A-C +
hg19:Y:10075517-T-G hg38:Y:10237908-T-G Y27831 +
hg19:Y:10080437-G-C hg38:Y:10242828-G-C Z30959 +
hg19:Y:10082081-G-C hg38:Y:10244472-G-C Z30960 +
hg19:Y:10082642-T-C hg38:Y:10245033-T-C Z30961 +
hg19:Y:10094482-T-A hg38:Y:10256873-T-A +
hg19:Y:13127632-C-G hg38:Y:10617118-C-G FT178443 +
hg19:Y:13297529-A-G hg38:Y:11141853-A-G +
hg19:Y:13324358-C-A hg38:Y:11168682-C-A BY38158 +
hg19:Y:13347384-A-C hg38:Y:11191708-A-C +
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hg19:Y:21235835-A-C hg38:Y:19073949-A-C Z31090 YY+
hg19:Y:21263408-G-T hg38:Y:19101522-G-T Z31091 YY+
hg19:Y:21263471-C-T hg38:Y:19101585-C-T Z31092 YY+
hg19:Y:21270308-G-A hg38:Y:19108422-G-A Z31093 Y+
hg19:Y:21314389-G-A hg38:Y:19152503-G-A Z31094 YY+
hg19:Y:21317402-A-T hg38:Y:19155516-A-T Z31095 YY+
hg19:Y:21323767-C-T hg38:Y:19161881-C-T Z31096 Y+
hg19:Y:21357947-G-C hg38:Y:19196061-G-C Z42274 Y27863 YY+
hg19:Y:21362793-A-C hg38:Y:19200907-A-C Y27839 Y+
hg19:Y:21392977-T-A hg38:Y:19231091-T-A Z31097 Y+
hg19:Y:21448467-A-G hg38:Y:19286581-A-G Z42275 Y27864 Y+
hg19:Y:21474523-C-T hg38:Y:19312637-C-T Z31098 Y+
hg19:Y:21506368-G-A hg38:Y:19344482-G-A Z31099 YY+
hg19:Y:21514652-C-A hg38:Y:19352766-C-A Z42276 Y27865 YY+
hg19:Y:21531897-T-C hg38:Y:19370011-T-C Z31100 YY+
hg19:Y:21543577-G-A hg38:Y:19381691-G-A FT298515 Y+
hg19:Y:21551737-A-G hg38:Y:19389851-A-G Y27840 Y+
hg19:Y:21557719-G-A hg38:Y:19395833-G-A Y27866 Z42277 YY+
hg19:Y:21569659-G-T hg38:Y:19407773-G-T Z31101 YY+
hg19:Y:21588611-C-T hg38:Y:19426725-C-T Z31102 Y+
hg19:Y:21609946-C-T hg38:Y:19448060-C-T P73 M5 YY+
hg19:Y:21685085-G-A hg38:Y:19523199-G-A SK1847 YY+
hg19:Y:21770637-CCCAG-C hg38:Y:19608751-CCCAG-C +
hg19:Y:21806552-C-T hg38:Y:19644666-C-T Z31104 Y+
hg19:Y:21866424-A-G hg38:Y:19704538-A-G M106 YY+
hg19:Y:21873287-C-T hg38:Y:19711401-C-T M83 YY+
hg19:Y:21876169-C-G hg38:Y:19714283-C-G Z31105 YY+
hg19:Y:21885884-G-A hg38:Y:19723998-G-A Z31106 YY+
hg19:Y:21919199-C-T hg38:Y:19757313-C-T Z31107 YY+
hg19:Y:21929233-T-C hg38:Y:19767347-T-C Z31108 YY+
hg19:Y:21948766-T-G hg38:Y:19786880-T-G Z31109 Z43406 YY+
hg19:Y:22001168-G-A hg38:Y:19839282-G-A Z31110 Y+
hg19:Y:22003568-T-C hg38:Y:19841682-T-C Z31111 YY+
hg19:Y:22006880-T-C hg38:Y:19844994-T-C Z31112 YY+
hg19:Y:22006975-T-C hg38:Y:19845089-T-C Z31113 YY+
hg19:Y:22028307-C-T hg38:Y:19866421-C-T Z31114 Z43407 YY+
hg19:Y:22140515-A-C hg38:Y:19978629-A-C Z31115 YY+
hg19:Y:22147651-A-G hg38:Y:19985765-A-G Z31116 YY+
hg19:Y:22158004-G-T hg38:Y:19996118-G-T Z31117 YY+
hg19:Y:22189855-A-AT hg38:Y:20027969-A-AT +
hg19:Y:22195858-C-T hg38:Y:20033972-C-T Y+
hg19:Y:22196480-A-G hg38:Y:20034594-A-G Y+
hg19:Y:22217030-C-G hg38:Y:20055144-C-G Y26297 DYZ19 +
hg19:Y:22219923-T-A hg38:Y:20058037-T-A DYZ19 +
hg19:Y:22232859-A-T hg38:Y:20070973-A-T DYZ19 +
hg19:Y:22233616-G-A hg38:Y:20071730-G-A DYZ19 +
hg19:Y:22233853-T-G hg38:Y:20071967-T-G DYZ19 +
hg19:Y:22238743-G-T hg38:Y:20076857-G-T BY40028 DYZ19 +
hg19:Y:22242313-A-C hg38:Y:20080427-A-C DYZ19 +
hg19:Y:22254310-T-C hg38:Y:20092424-T-C DYZ19 +
hg19:Y:22255027-A-T hg38:Y:20093141-A-T DYZ19 +
hg19:Y:22256473-C-A hg38:Y:20094587-C-A Y34497BY36402 DYZ19 +
hg19:Y:22274901-A-C hg38:Y:20113015-A-C DYZ19 +
hg19:Y:22275426-A-T hg38:Y:20113540-A-T DYZ19 +
hg19:Y:22283877-G-C hg38:Y:20121991-G-C DYZ19 +
hg19:Y:22299139-T-A hg38:Y:20137253-T-A DYZ19 +
hg19:Y:22299837-G-T hg38:Y:20137951-G-T BY216816 DYZ19 +
hg19:Y:22424417-G-A hg38:Y:20262531-G-A DYZ19 +
hg19:Y:22430574-T-G hg38:Y:20268688-T-G BY40018 DYZ19 +
hg19:Y:22433749-C-G hg38:Y:20271863-C-G DYZ19 +
hg19:Y:22441946-C-T hg38:Y:20280060-C-T DYZ19 +
hg19:Y:22444579-G-C hg38:Y:20282693-G-C BY40020 DYZ19 +
hg19:Y:22457881-G-A hg38:Y:20295995-G-A Z31118 DYZ19 +
hg19:Y:22460660-G-A hg38:Y:20298774-G-A Z31119 DYZ19 +
hg19:Y:22464633-A-G hg38:Y:20302747-A-G Z31120 DYZ19 +
hg19:Y:22465753-C-T hg38:Y:20303867-C-T Z31121 DYZ19 +
hg19:Y:22467190-A-C hg38:Y:20305304-A-C Z31122 DYZ19 +
hg19:Y:22467537-T-A hg38:Y:20305651-T-A Z31123 DYZ19 +
hg19:Y:22467837-C-T hg38:Y:20305951-C-T DYZ19 +
hg19:Y:22468384-T-A hg38:Y:20306498-T-A Z31124 DYZ19 +
hg19:Y:22468387-C-T hg38:Y:20306501-C-T Z31125 DYZ19 +
hg19:Y:22470702-G-A hg38:Y:20308816-G-A DYZ19 +
hg19:Y:22471593-C-A hg38:Y:20309707-C-A Z31126 DYZ19 +
hg19:Y:22476045-C-A hg38:Y:20314159-C-A DYZ19 +
hg19:Y:22476074-G-A hg38:Y:20314188-G-A Z31127 ZS9439 DYZ19 +
hg19:Y:22477664-A-C hg38:Y:20315778-A-C Z31128 DYZ19 +
hg19:Y:22477703-T-C hg38:Y:20315817-T-C Z31129 DYZ19 +
hg19:Y:22478596-C-T hg38:Y:20316710-C-T BY40024 DYZ19 +
hg19:Y:22478788-A-C hg38:Y:20316902-A-C BY40025 DYZ19 +
hg19:Y:22485944-C-G hg38:Y:20324058-C-G Z31131 DYZ19 +
hg19:Y:22507254-A-G hg38:Y:20345368-A-G Z31132 DYZ19 +
hg19:Y:22508766-T-G hg38:Y:20346880-T-G DYZ19 +
hg19:Y:22510448-G-A hg38:Y:20348562-G-A DYZ19 +
hg19:Y:22512893-T-G hg38:Y:20351007-T-G Y27869 DYZ19 +
hg19:Y:22529207-AT-A hg38:Y:20367321-AT-A +
hg19:Y:22530323-G-A hg38:Y:20368437-G-A Y+
hg19:Y:22538867-A-G hg38:Y:20376981-A-G Z31133 Y+
hg19:Y:22541105-G-A hg38:Y:20379219-G-A Z31134 YY+
hg19:Y:22580315-C-T hg38:Y:20418429-C-T Z31135 YY+
hg19:Y:22585364-C-G hg38:Y:20423478-C-G Z31137 YY+
hg19:Y:22591707-G-T hg38:Y:20429821-G-T Z31138 YY+
hg19:Y:22619437-G-T hg38:Y:20457551-G-T Z31139 YY+
hg19:Y:22622775-C-T hg38:Y:20460889-C-T Z31140 Y+
hg19:Y:22647025-G-A hg38:Y:20485139-G-A Z31141 YY+
hg19:Y:22678773-G-A hg38:Y:20516887-G-A Z43408 Y26298 YY+
hg19:Y:22694582-T-C hg38:Y:20532696-T-C Z31142 Y+
hg19:Y:22729710-T-A hg38:Y:20567824-T-A Z43409 Y26299 YY+
hg19:Y:22733730-A-G hg38:Y:20571844-A-G Z31143 YY+
hg19:Y:22773249-G-A hg38:Y:20611363-G-A Z31144 YY+
hg19:Y:22791140-C-G hg38:Y:20629254-C-G Y27870 Z42279 YY+
hg19:Y:22794375-G-A hg38:Y:20632489-G-A Z31145 YY+
hg19:Y:22802316-G-T hg38:Y:20640430-G-T Z42280 Y26344 YY+
hg19:Y:22808950-C-A hg38:Y:20647064-C-A Z31146 YY+
hg19:Y:22826938-G-T hg38:Y:20665052-G-T FT299095 YY+
hg19:Y:22833461-T-C hg38:Y:20671575-T-C Z31147 YY+
hg19:Y:22852111-A-G hg38:Y:20690225-A-G Z31148 Y+
hg19:Y:22864231-C-A hg38:Y:20702345-C-A Z31149 YY+
hg19:Y:22885471-G-A hg38:Y:20723585-G-A Z31150 YY+
hg19:Y:22953120-G-T hg38:Y:20791234-G-T Z31151 YY+
hg19:Y:22998408-A-G hg38:Y:20836522-A-G Z31152 YY+
hg19:Y:23032344-T-C hg38:Y:20870458-T-C Z31153 YY+
hg19:Y:23102614-TG-T hg38:Y:20940728-TG-T +
hg19:Y:23123650-G-A hg38:Y:20961764-G-A Z31155 YY+
hg19:Y:23125531-C-G hg38:Y:20963645-C-G Z31156 YY+
hg19:Y:23127526-T-C hg38:Y:20965640-T-C Y27871 YY+
hg19:Y:23130833-T-C hg38:Y:20968947-T-C Z31157 YY+
hg19:Y:23150645-T-C hg38:Y:20988759-T-C Z31158 YY+
hg19:Y:23159757-G-C hg38:Y:20997871-G-C Z31159 Y+
hg19:Y:23163023-G-A hg38:Y:21001137-G-A Z31160 Y+
hg19:Y:23212245-T-C hg38:Y:21050359-T-C Y27872 Y+
hg19:Y:23228536-G-A hg38:Y:21066650-G-A FT390762 Y+
hg19:Y:23232702-C-A hg38:Y:21070816-C-A Y26345 Y+
hg19:Y:23338962-T-C hg38:Y:21177076-T-C Z31161 Y+
hg19:Y:23372003-C-T hg38:Y:21210117-C-T Z31162 YY+
hg19:Y:23388612-T-G hg38:Y:21226726-T-G Z31163 YY+
hg19:Y:23441702-G-A hg38:Y:21279816-G-A Z31164 Y+
hg19:Y:23443020-G-A hg38:Y:21281134-G-A Z31165 YY+
hg19:Y:23445191-G-C hg38:Y:21283305-G-C Z31166 YY+
hg19:Y:23461113-A-G hg38:Y:21299227-A-G Z31167 YY+
hg19:Y:23563089-G-A hg38:Y:21401203-G-A Z31168 YY+
hg19:Y:23586950-G-A hg38:Y:21425064-G-A Z31169 YY+
hg19:Y:23590774-A-C hg38:Y:21428888-A-C Y27844 YY+
hg19:Y:23596565-G-A hg38:Y:21434679-G-A Z31170 YY+
hg19:Y:23622179-G-A hg38:Y:21460293-G-A Z31171 YY+
hg19:Y:23635202-G-C hg38:Y:21473316-G-C Z31172 YY+
hg19:Y:23749328-T-G hg38:Y:21587442-T-G Z31173 Y+
hg19:Y:23781867-G-C hg38:Y:21619981-G-C Z31174 Y+
hg19:Y:23786763-T-A hg38:Y:21624877-T-A Z31175 +
hg19:Y:23825512-C-G hg38:Y:21663626-C-G Y27845 Y+
hg19:Y:23874097-A-G hg38:Y:21712211-A-G Z31177 Y+
hg19:Y:23879337-G-C hg38:Y:21717451-G-C Z31178 +
hg19:Y:23879358-A-C hg38:Y:21717472-A-C Z31179 +
hg19:Y:23880456-T-A hg38:Y:21718570-T-A Z31180 Y+
hg19:Y:23980433-C-G hg38:Y:21834286-C-G Z31181 Y+
hg19:Y:23992721-A-G hg38:Y:21846574-A-G FT332692 +
hg19:Y:23996887-C-G hg38:Y:21850740-C-G Z31182 Y+
hg19:Y:24401989-C-G hg38:Y:22255842-C-G Z31183 Y+
hg19:Y:24419496-G-A hg38:Y:22273349-G-A Z31184 Y+
hg19:Y:24433677-C-T hg38:Y:22287530-C-T Z31185 Y+
hg19:Y:24490464-C-T hg38:Y:22344317-C-T +
hg19:Y:24493037-G-C hg38:Y:22346890-G-C Y26300 Z43410 +
hg19:Y:25093648-C-T hg38:Y:22947501-C-T g1 +
hg19:Y:25403897-G-A hg38:Y:23257750-G-A P2_r2 +
hg19:Y:26543234-T-C hg38:Y:24397087-T-C P1_g2 +
hg19:Y:28437615-C-T hg38:Y:26291468-C-T P1_gr2 +
hg19:Y:28522072-C-A hg38:Y:26375925-C-A Y26346 +
hg19:Y:28533412-A-G hg38:Y:26387265-A-G Y26347 +
hg19:Y:28626768-T-C hg38:Y:26480621-T-C Y26348 Y+
hg19:Y:28674327-C-G hg38:Y:26528180-C-G Y26349 +
hg19:Y:28678832-C-A hg38:Y:26532685-C-A Z31186 +
hg19:Y:28756366-C-T hg38:Y:26610219-C-T Y26350 Y+
hg19:Y:28778515-C-A hg38:Y:26632368-C-A Z31187 +
hg19:Y:28787742-G-A hg38:Y:26641595-G-A Z31188 +

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.



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