1k Genomes

1kG: DNK02

Tree Position

A0-T-YP2191 > P305[A1] > A1b > BT/A1b2 > M168/PF1416[CT] > M145/P205/PF144 > M96/PF1823 > M75 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STR1kG
DNK02
hg19:Y:8831143-G-A hg38:Y:8963102-G-A S27900FGC39545 YY+
hg19:Y:3474558-AG-A hg38:Y:3606517-AG-A +
hg19:Y:3882066-C-T hg38:Y:4014025-C-T FT694 +
hg19:Y:8754504-G-A hg38:Y:8886463-G-A Y38176 YY+
hg19:Y:13397025-C-T hg38:Y:11241349-C-T FGC69352 +
hg19:Y:2663889-C-A hg38:Y:2795848-C-A P210 M41 YY+
hg19:Y:2675514-G-T hg38:Y:2807473-G-T Y27160 Y+
hg19:Y:2724561-C-G hg38:Y:2856520-C-G Z20779 YY+
hg19:Y:2799434-G-A hg38:Y:2931393-G-A Z20780 FGC24773 YY+
hg19:Y:2931206-TC-T hg38:Y:3063165-TC-T +
hg19:Y:2966494-A-T hg38:Y:3098453-A-T FT368 +
hg19:Y:3005691-A-G hg38:Y:3137650-A-G FT379 +
hg19:Y:3031713-A-G hg38:Y:3163672-A-G FT14830 +
hg19:Y:3052078-G-A hg38:Y:3184037-G-A FT208265 +
hg19:Y:3089728-G-A hg38:Y:3221687-G-A FT14890 +
hg19:Y:3149841-C-T hg38:Y:3281800-C-T FT439 +
hg19:Y:3151659-G-T hg38:Y:3283618-G-T FT316245 +
hg19:Y:3199594-C-T hg38:Y:3331553-C-T FT452 +
hg19:Y:3225943-T-C hg38:Y:3357902-T-C Y27162 +
hg19:Y:3353256-T-C hg38:Y:3485215-T-C FT316922 +
hg19:Y:3403741-C-T hg38:Y:3535700-C-T Y27163 +
hg19:Y:3426376-C-T hg38:Y:3558335-C-T FT529 +
hg19:Y:3436968-G-C hg38:Y:3568927-G-C FT533 +
hg19:Y:3582694-C-A hg38:Y:3714653-C-A FT194838 +
hg19:Y:3583083-G-T hg38:Y:3715042-G-T FT583 +
hg19:Y:3597131-G-T hg38:Y:3729090-G-T FT590 +
hg19:Y:3654836-A-T hg38:Y:3786795-A-T FT613 +
hg19:Y:3673026-A-T hg38:Y:3804985-A-T FT620 +
hg19:Y:3767926-G-A hg38:Y:3899885-G-A +
hg19:Y:3778777-A-T hg38:Y:3910736-A-T FT663 +
hg19:Y:3786209-G-T hg38:Y:3918168-G-T FT666 +
hg19:Y:3816379-C-G hg38:Y:3948338-C-G FT677 +
hg19:Y:3822299-G-C hg38:Y:3954258-G-C FT678 +
hg19:Y:3838825-C-T hg38:Y:3970784-C-T FT685 +
hg19:Y:3959435-A-G hg38:Y:4091394-A-G FT726 +
hg19:Y:3964844-T-C hg38:Y:4096803-T-C FT208444 +
hg19:Y:3995588-C-A hg38:Y:4127547-C-A FT741 +
hg19:Y:4001862-G-A hg38:Y:4133821-G-A Y27165 +
hg19:Y:4060185-G-C hg38:Y:4192144-G-C FT764 +
hg19:Y:4109208-A-C hg38:Y:4241167-A-C Y27166 +
hg19:Y:4174193-A-G hg38:Y:4306152-A-G FT796 +
hg19:Y:4220474-A-T hg38:Y:4352433-A-T Y25289 +
hg19:Y:4225713-G-A hg38:Y:4357672-G-A +
hg19:Y:4239385-C-T hg38:Y:4371344-C-T FT811 +
hg19:Y:4245262-C-T hg38:Y:4377221-C-T FT814 +
hg19:Y:4311457-T-A hg38:Y:4443416-T-A FT834 +
hg19:Y:4370968-A-G hg38:Y:4502927-A-G Y27167 +
hg19:Y:4391382-CTT-C hg38:Y:4523341-CTT-C +
hg19:Y:4421249-C-A hg38:Y:4553208-C-A +
hg19:Y:4591235-C-G hg38:Y:4723194-C-G +
hg19:Y:4684200-G-C hg38:Y:4816159-G-C FT938 +
hg19:Y:4756164-T-A hg38:Y:4888123-T-A FT141704 +
hg19:Y:4816307-TA-T hg38:Y:4948266-TA-T +
hg19:Y:4946972-C-A hg38:Y:5078931-C-A FT1033 +
hg19:Y:5116271-G-A hg38:Y:5248230-G-A +
hg19:Y:5117893-A-G hg38:Y:5249852-A-G FT322806 +
hg19:Y:5184246-G-T hg38:Y:5316205-G-T Y27168 +
hg19:Y:5245591-A-C hg38:Y:5377550-A-C FT1129 +
hg19:Y:5252885-C-G hg38:Y:5384844-C-G FT1135 +
hg19:Y:5291789-A-G hg38:Y:5423748-A-G FT1146 +
hg19:Y:5299901-G-A hg38:Y:5431860-G-A FT1150 +
hg19:Y:5301011-C-G hg38:Y:5432970-C-G FT323457 +
hg19:Y:5312650-G-A hg38:Y:5444609-G-A FT1154 +
hg19:Y:5438757-A-G hg38:Y:5570716-A-G FT1197 +
hg19:Y:5441302-C-T hg38:Y:5573261-C-T +
hg19:Y:5454717-G-A hg38:Y:5586676-G-A FT1203 +
hg19:Y:5645997-G-A hg38:Y:5777956-G-A FT1264 +
hg19:Y:5701424-C-T hg38:Y:5833383-C-T FT324815 +
hg19:Y:5710260-C-T hg38:Y:5842219-C-T +
hg19:Y:5774559-T-G hg38:Y:5906518-T-G +
hg19:Y:5806717-G-C hg38:Y:5938676-G-C Y25290 +
hg19:Y:5945945-C-T hg38:Y:6077904-C-T FT1389 +
hg19:Y:6018862-G-A hg38:Y:6150821-G-A FT1418 +
hg19:Y:6036002-G-A hg38:Y:6167961-G-A FT1426 +
hg19:Y:6046710-C-A hg38:Y:6178669-C-A FT1432 +
hg19:Y:6075768-G-A hg38:Y:6207727-G-A FT1452 +
hg19:Y:6090201-G-A hg38:Y:6222160-G-A +
hg19:Y:6357225-A-G hg38:Y:6489184-A-G BY45860 +
hg19:Y:6405302-C-A hg38:Y:6537261-C-A Y27170 +
hg19:Y:6593076-G-A hg38:Y:6725035-G-A Y27171 +
hg19:Y:6629008-A-G hg38:Y:6760967-A-G Y25291 YY+
hg19:Y:6633711-G-A hg38:Y:6765670-G-A Y25292 YY+
hg19:Y:6720493-A-C hg38:Y:6852452-A-C Z20781 YY+
hg19:Y:6721443-C-T hg38:Y:6853402-C-T Y25293 Y+
hg19:Y:6723783-A-T hg38:Y:6855742-A-T Y25294 Y+
hg19:Y:6743244-C-A hg38:Y:6875203-C-A Z20782 YY+
hg19:Y:6752894-T-C hg38:Y:6884853-T-C Z20783 YY+
hg19:Y:6779658-C-A hg38:Y:6911617-C-A SK971 YY+
hg19:Y:6805439-C-G hg38:Y:6937398-C-G Y25295 YY+
hg19:Y:6826024-G-A hg38:Y:6957983-G-A Y38104 YY+
hg19:Y:6859326-T-A hg38:Y:6991285-T-A Y25296 YY+
hg19:Y:6861400-A-G hg38:Y:6993359-A-G Y25297 YY+
hg19:Y:6869240-C-G hg38:Y:7001199-C-G Y24819 YY+
hg19:Y:6874798-T-G hg38:Y:7006757-T-G Y38174 YY+
hg19:Y:6952197-A-G hg38:Y:7084156-A-G Y25298 YY+
hg19:Y:6989185-C-T hg38:Y:7121144-C-T Y25299 YY+
hg19:Y:6992975-A-G hg38:Y:7124934-A-G FT333632 YY+
hg19:Y:7037100-A-C hg38:Y:7169059-A-C Y25300 YY+
hg19:Y:7072454-G-A hg38:Y:7204413-G-A Y25301 YY+
hg19:Y:7144232-G-A hg38:Y:7276191-G-A Y27173 YY+
hg19:Y:7165541-C-T hg38:Y:7297500-C-T Y25302 YY+
hg19:Y:7193710-C-A hg38:Y:7325669-C-A Y25303 YY+
hg19:Y:7226064-C-G hg38:Y:7358023-C-G Y25304 YY+
hg19:Y:7245108-C-T hg38:Y:7377067-C-T SK962 YY+
hg19:Y:7312395-C-T hg38:Y:7444354-C-T Y25305 YY+
hg19:Y:7430939-C-G hg38:Y:7562898-C-G Y25306 YY+
hg19:Y:7434175-G-C hg38:Y:7566134-G-C Y25307 Y+
hg19:Y:7435746-G-A hg38:Y:7567705-G-A Y27174 Y+
hg19:Y:7481000-A-C hg38:Y:7612959-A-C IR1_L +
hg19:Y:7512707-A-G hg38:Y:7644666-A-G FT333889 Y+
hg19:Y:7555105-C-A hg38:Y:7687064-C-A YY+
hg19:Y:7585162-G-A hg38:Y:7717121-G-A Y27175 YY+
hg19:Y:7602659-G-A hg38:Y:7734618-G-A Y25308 YY+
hg19:Y:7603147-G-A hg38:Y:7735106-G-A Y27176 YY+
hg19:Y:7621623-A-G hg38:Y:7753582-A-G Y27177 Y+
hg19:Y:7632200-C-T hg38:Y:7764159-C-T Y+
hg19:Y:7634048-T-C hg38:Y:7766007-T-C Y25309 YY+
hg19:Y:7638975-C-T hg38:Y:7770934-C-T Y25310 YY+
hg19:Y:7687799-C-T hg38:Y:7819758-C-T Y25311 YY+
hg19:Y:7742398-C-T hg38:Y:7874357-C-T Y25312 YY+
hg19:Y:7763275-G-A hg38:Y:7895234-G-A Y25313 YY+
hg19:Y:7767779-A-G hg38:Y:7899738-A-G Y27178 YY+
hg19:Y:7907009-G-A hg38:Y:8038968-G-A Y25314 YY+
hg19:Y:7914732-G-A hg38:Y:8046691-G-A YY+
hg19:Y:7926043-A-G hg38:Y:8058002-A-G Y25315 YY+
hg19:Y:7929846-C-T hg38:Y:8061805-C-T Y25316 YY+
hg19:Y:7936799-G-A hg38:Y:8068758-G-A Y27179 YY+
hg19:Y:8002267-C-T hg38:Y:8134226-C-T Y25317 YY+
hg19:Y:8003525-T-C hg38:Y:8135484-T-C Y25318 Y+
hg19:Y:8008263-G-T hg38:Y:8140222-G-T Y27180 YY+
hg19:Y:8095655-T-C hg38:Y:8227614-T-C Y25319 YY+
hg19:Y:8204554-C-T hg38:Y:8336513-C-T Y25320 YY+
hg19:Y:8240207-G-A hg38:Y:8372166-G-A M10445 YY+
hg19:Y:8258168-A-G hg38:Y:8390127-A-G Y25321 YY+
hg19:Y:8263250-A-T hg38:Y:8395209-A-T Y27181 YY+
hg19:Y:8402722-G-A hg38:Y:8534681-G-A Y25322 YY+
hg19:Y:8411907-G-GA hg38:Y:8543866-G-GA +
hg19:Y:8418112-G-A hg38:Y:8550071-G-A SK968 YY+
hg19:Y:8424683-C-T hg38:Y:8556642-C-T YY+
hg19:Y:8466298-C-G hg38:Y:8598257-C-G A10089 YY+
hg19:Y:8476770-A-C hg38:Y:8608729-A-C SK963 YY+
hg19:Y:8521116-C-T hg38:Y:8653075-C-T YY+
hg19:Y:8560900-C-T hg38:Y:8692859-C-T FT334551 YY+
hg19:Y:8564133-A-G hg38:Y:8696092-A-G Y25323 YY+
hg19:Y:8572234-G-A hg38:Y:8704193-G-A Y25324 YY+
hg19:Y:8579983-G-A hg38:Y:8711942-G-A Y27182 YY+
hg19:Y:8649678-G-C hg38:Y:8781637-G-C Y25325 YY+
hg19:Y:8661201-T-C hg38:Y:8793160-T-C Y25326 Y+
hg19:Y:8744822-A-T hg38:Y:8876781-A-T Y25327 YY+
hg19:Y:8755546-C-A hg38:Y:8887505-C-A Y25328 YY+
hg19:Y:8786783-C-T hg38:Y:8918742-C-T Y25329 YY+
hg19:Y:8827961-C-T hg38:Y:8959920-C-T Y25330 YY+
hg19:Y:8911759-C-T hg38:Y:9043718-C-T Y25331 +
hg19:Y:8979603-A-G hg38:Y:9141994-A-G Y38105 Y+
hg19:Y:9078229-C-G hg38:Y:9240620-C-G Y25332 +
hg19:Y:9144132-C-T hg38:Y:9306523-C-T Y+
hg19:Y:9147070-C-G hg38:Y:9309461-C-G Y38175 Y+
hg19:Y:9397455-C-T hg38:Y:9559846-C-T Y27183 YY+
hg19:Y:9397467-A-G hg38:Y:9559858-A-G Y25333 YY+
hg19:Y:9403200-GTACATA-G hg38:Y:9565591-GTACATA-G +
hg19:Y:9414178-G-C hg38:Y:9576569-G-C Y25334 Y+
hg19:Y:9440062-C-T hg38:Y:9602453-C-T Y25335 YY+
hg19:Y:9507593-C-T hg38:Y:9669984-C-T +
hg19:Y:9515211-G-A hg38:Y:9677602-G-A BY47554 +
hg19:Y:9642181-C-T hg38:Y:9804572-C-T SK972 IR3_Prx +
hg19:Y:9786441-T-C hg38:Y:9948832-T-C Y25336 Y+
hg19:Y:9820352-G-A hg38:Y:9982743-G-A Y27184 YY+
hg19:Y:9825589-T-C hg38:Y:9987980-T-C Y27185 Y+
hg19:Y:9896863-C-G hg38:Y:10059254-C-G Y+
hg19:Y:9904237-A-C hg38:Y:10066628-A-C Y27186 Y+
hg19:Y:9913150-C-A hg38:Y:10075541-C-A Y27187 Y+
hg19:Y:9916317-C-T hg38:Y:10078708-C-T FGC37459 Y+
hg19:Y:9929043-T-C hg38:Y:10091434-T-C FT227866 Y+
hg19:Y:9969162-G-A hg38:Y:10131553-G-A S12874 Y+
hg19:Y:10006721-C-G hg38:Y:10169112-C-G BY46740 Y+
hg19:Y:10007929-G-C hg38:Y:10170320-G-C Y+
hg19:Y:10029901-C-T hg38:Y:10192292-C-T Y+
hg19:Y:10038202-A-G hg38:Y:10200593-A-G BY45924 +
hg19:Y:10075233-CA-C hg38:Y:10237624-CA-C +
hg19:Y:13127611-A-G hg38:Y:10617097-A-G FT427657 +
hg19:Y:13130872-C-G hg38:Y:10620358-C-G +
hg19:Y:13132507-G-T hg38:Y:10621993-G-T Y25337 +
hg19:Y:13201224-C-A hg38:Y:11045548-C-A +
hg19:Y:13308780-G-A hg38:Y:11153104-G-A FT227856 +
hg19:Y:13493530-T-C hg38:Y:11337854-T-C +
hg19:Y:13584891-T-G hg38:Y:11429215-T-G +
hg19:Y:13603579-T-C hg38:Y:11447903-T-C +
hg19:Y:13621118-G-A hg38:Y:11465442-G-A FT227854 +
hg19:Y:13629575-AG-A hg38:Y:11473899-AG-A +
hg19:Y:13637682-C-A hg38:Y:11482006-C-A +
hg19:Y:13679239-G-C hg38:Y:11523563-G-C DYZ17 +
hg19:Y:13685560-G-T hg38:Y:11529884-G-T BY48398 DYZ17 +
hg19:Y:13710988-A-G hg38:Y:11555312-A-G BY89402 DYZ17 +
hg19:Y:13717036-G-T hg38:Y:11561360-G-T BY48414 DYZ17 +
hg19:Y:13812438-G-A hg38:Y:11691732-G-A Y25338 DYZ17 +
hg19:Y:13822272-C-T hg38:Y:11701566-C-T Y25339 DYZ17 +
hg19:Y:13832989-T-C hg38:Y:11712283-T-C Y25340 DYZ17 +
hg19:Y:13867780-T-G hg38:Y:11747074-T-G Y25341 DYZ17 +
hg19:Y:13926267-C-T hg38:Y:11805561-C-T Y25342 Y+
hg19:Y:13930653-G-A hg38:Y:11809947-G-A Y27188 Y+
hg19:Y:13958051-T-A hg38:Y:11837345-T-A FT20885 Y+
hg19:Y:14013675-C-G hg38:Y:11892969-C-G Y+
hg19:Y:14050395-C-A hg38:Y:11929689-C-A Y27190 Y+
hg19:Y:14084191-C-T hg38:Y:11963485-C-T FT335261 YY+
hg19:Y:14095562-T-C hg38:Y:11974856-T-C Y27191 YY+
hg19:Y:14103921-G-T hg38:Y:11983215-G-T Y25343 YY+
hg19:Y:14137117-C-T hg38:Y:12016411-C-T Y25344 YY+
hg19:Y:14212706-G-A hg38:Y:12092000-G-A Y25345 Y+
hg19:Y:14246121-G-A hg38:Y:12125415-G-A Y25346 YY+
hg19:Y:14257697-A-G hg38:Y:12136991-A-G Y+
hg19:Y:14259986-C-T hg38:Y:12139280-C-T Y25347 Y+
hg19:Y:14267565-T-C hg38:Y:12146859-T-C Y25348 Y+
hg19:Y:14272141-C-A hg38:Y:12151435-C-A Y27192 Y+
hg19:Y:14282105-T-C hg38:Y:12161399-T-C Y25349 YY+
hg19:Y:14306302-C-G hg38:Y:12185596-C-G Y25350 Y+
hg19:Y:14313663-G-A hg38:Y:12192957-G-A FT335460 YY+
hg19:Y:14327324-T-G hg38:Y:12206618-T-G Y25351 YY+
hg19:Y:14361040-C-T hg38:Y:12240335-C-T Y25352 YY+
hg19:Y:14369807-A-G hg38:Y:12249103-A-G Y25353 YY+
hg19:Y:14411411-A-G hg38:Y:12290708-A-G Y27193 YY+
hg19:Y:14442048-T-C hg38:Y:12321321-T-C Y25354 Y+
hg19:Y:14448689-T-C hg38:Y:12327962-T-C Y25355 YY+
hg19:Y:14458183-TG-T hg38:Y:12337456-TG-T +
hg19:Y:14473662-A-T hg38:Y:12352931-A-T F18982F18982 YY+
hg19:Y:14489062-C-T hg38:Y:12368331-C-T Y25356 YY+
hg19:Y:14512465-C-T hg38:Y:12400670-C-T Y25357 Y+
hg19:Y:14602172-C-T hg38:Y:12490374-C-T Y25359 YY+
hg19:Y:14607834-T-A hg38:Y:12496036-T-A Y27194 Y+
hg19:Y:14650898-T-C hg38:Y:12538963-T-C Y25360 YY+
hg19:Y:14659112-G-T hg38:Y:12547177-G-T Y25361 YY+
hg19:Y:14706507-G-A hg38:Y:12594573-G-A Y25362 YY+
hg19:Y:14717773-G-A hg38:Y:12605841-G-A Y25363 Y+
hg19:Y:14727762-GCA-G hg38:Y:12615830-GCA-G +
hg19:Y:14803968-C-A hg38:Y:12692039-C-A Y25364 YY+
hg19:Y:14826752-C-G hg38:Y:12714819-C-G Y25365 YY+
hg19:Y:14840320-T-C hg38:Y:12728387-T-C Y25366 YY+
hg19:Y:14875261-A-G hg38:Y:12763331-A-G Y25367 YY+
hg19:Y:14916149-A-G hg38:Y:12804216-A-G Y25368 YY+
hg19:Y:14923438-G-C hg38:Y:12811503-G-C M237 YY+
hg19:Y:14931017-G-A hg38:Y:12819082-G-A Y25369 YY+
hg19:Y:14984425-G-C hg38:Y:12872493-G-C Y27195 YY+
hg19:Y:14991487-A-C hg38:Y:12879572-A-C Y25370 YY4×AAAC+
hg19:Y:15013867-GA-G hg38:Y:12901955-GA-G +
hg19:Y:15022005-A-G hg38:Y:12910094-A-G M250 YY+
hg19:Y:15057408-T-C hg38:Y:12945500-T-C Y25371 YY+
hg19:Y:15062974-TC-T hg38:Y:12951066-TC-T +
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hg19:Y:23395948-T-C hg38:Y:21234062-T-C Y27247 YY+
hg19:Y:23427758-C-T hg38:Y:21265872-C-T Y27248 YY+
hg19:Y:23445170-A-G hg38:Y:21283284-A-G Y25487 YY+
hg19:Y:23447994-A-G hg38:Y:21286108-A-G Y+
hg19:Y:23463284-G-A hg38:Y:21301398-G-A Y25488 YY+
hg19:Y:23535708-T-A hg38:Y:21373822-T-A Y25489 YY+
hg19:Y:23540517-CT-C hg38:Y:21378631-CT-C +
hg19:Y:23559089-C-T hg38:Y:21397203-C-T Y25490 BY50534 YY+
hg19:Y:23560123-T-C hg38:Y:21398237-T-C Y25491 YY+
hg19:Y:23561069-C-T hg38:Y:21399183-C-T Y25492 YY+
hg19:Y:23600922-T-A hg38:Y:21439036-T-A Y25493 Y+
hg19:Y:23653449-T-C hg38:Y:21491563-T-C BY147087 Y+
hg19:Y:23756501-T-G hg38:Y:21594615-T-G Y25494 Y+
hg19:Y:23788992-G-T hg38:Y:21627106-G-T Y25495 +
hg19:Y:23814339-C-G hg38:Y:21652453-C-G Y25496 Y+
hg19:Y:23825378-T-C hg38:Y:21663492-T-C Y+
hg19:Y:23862202-G-A hg38:Y:21700316-G-A BY48050 Y+
hg19:Y:23867444-G-A hg38:Y:21705558-G-A BY48051 Y+
hg19:Y:23887578-A-C hg38:Y:21725692-A-C Y+
hg19:Y:23892308-T-C hg38:Y:21730422-T-C Y+
hg19:Y:23981656-G-T hg38:Y:21835509-G-T Y27249 Y+
hg19:Y:23983288-T-C hg38:Y:21837141-T-C Y25497 Y+
hg19:Y:24451557-G-T hg38:Y:22305410-G-T Y25498 Y+
hg19:Y:25305436-A-G hg38:Y:23159289-A-G P2_r1 +
hg19:Y:27576114-G-T hg38:Y:25429967-G-T P1_Y2 +
hg19:Y:28460497-C-T hg38:Y:26314350-C-T Y27250 +
hg19:Y:28478232-T-G hg38:Y:26332085-T-G Y25499 +
hg19:Y:28501652-G-A hg38:Y:26355505-G-A FT2322 +
hg19:Y:28512410-C-T hg38:Y:26366263-C-T Y25500 +
hg19:Y:28584958-T-C hg38:Y:26438811-T-C Y25501 +
hg19:Y:28590985-G-A hg38:Y:26444838-G-A Y25502 +
hg19:Y:28631029-CTGTTGATAGTTTCTTT-C hg38:Y:26484882-CTGTTGATAGTTTCTTT-C +
hg19:Y:28639214-T-G hg38:Y:26493067-T-G Y38177 +
hg19:Y:28751775-T-C hg38:Y:26605628-T-C Y25503 +
hg19:Y:28780076-G-C hg38:Y:26633929-G-C Y27251 +
hg19:Y:28800337-G-A hg38:Y:26654190-G-A Y27252 +
hg19:Y:28808405-T-A hg38:Y:26662258-T-A BY151952 +

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.



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