Jenner

FTDNA: 244576, BigY2: 244576

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > FGC11134 > FGC12055 > A353

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRFTDNA
244576		BigY2
244576
hg19:Y:7474944-A-G hg38:Y:7606903-A-G IR1_L ***A*
hg19:Y:20767664-G-A hg38:Y:18605778-G-A P4_Prx ***A*
hg19:Y:22290912-C-T hg38:Y:20129026-C-T DYZ19 ***A*
hg19:Y:25879842-A-G hg38:Y:23733695-A-G P1_Y1 ***A*
hg19:Y:25968593-G-A hg38:Y:23822446-G-A P1_Y1 ***A*
hg19:Y:26029914-A-G hg38:Y:23883767-A-G P1_Y1 ***A*
hg19:Y:28817076-C-A hg38:Y:26670929-C-A A*
hg19:Y:22275942-C-A hg38:Y:20114056-C-A DYZ19 A*
hg19:Y:22275943-C-A hg38:Y:20114057-C-A DYZ19 A*
hg19:Y:28816579-G-T hg38:Y:26670432-G-T A*
hg19:Y:24482276-A-G hg38:Y:22336129-A-G Y2804 Z19291 ++
hg19:Y:26286086-T-TTTTTA hg38:Y:24139939-T-TTTTTA P1_Y1 7×TTTTA**+
hg19:Y:17359732-C-CA hg38:Y:15247852-C-CA Y40070Y325 9×A++
hg19:Y:3279698-AAAATAAAT-A hg38:Y:3411657-AAAATAAAT-A 9×AAAT+
hg19:Y:22506232-G-T hg38:Y:20344346-G-T FT460639 DYZ19 **+
hg19:Y:6748372-A-T hg38:Y:6880331-A-T Y45242 YY++
hg19:Y:8549516-C-T hg38:Y:8681475-C-T Y47527 YY++
hg19:Y:8645069-C-G hg38:Y:8777028-C-G Y47682 YY++
hg19:Y:8703354-G-T hg38:Y:8835313-G-T Y47764 YY++
hg19:Y:8881656-G-A hg38:Y:9013615-G-A Y48046 Y++
hg19:Y:8887364-A-T hg38:Y:9019323-A-T Y48058 Y++
hg19:Y:13802354-G-T hg38:Y:11681648-G-T Y48670 DYZ17 ++
hg19:Y:14222030-C-T hg38:Y:12101324-C-T Y49194 YY++
hg19:Y:14454801-T-C hg38:Y:12334074-T-C Y49554 YY++
hg19:Y:14969039-G-T hg38:Y:12857114-G-T PH1544 Y7560 BY1132 YY++
hg19:Y:15472390-C-G hg38:Y:13360510-C-G BY101803 YY++
hg19:Y:15582407-G-A hg38:Y:13470527-G-A Y50864 YY++
hg19:Y:15781449-G-A hg38:Y:13669569-G-A Y51136 YY++
hg19:Y:15784939-C-T hg38:Y:13673059-C-T BY37942 YY++
hg19:Y:16781143-T-A hg38:Y:14669263-T-A Y52317 YY++
hg19:Y:17844621-G-T hg38:Y:15732741-G-T Y53798 YY++
hg19:Y:17907406-G-A hg38:Y:15795526-G-A Y53902 YY++
hg19:Y:18047304-C-T hg38:Y:15935424-C-T Y54120 YY++
hg19:Y:18397260-A-G hg38:Y:16285380-A-G Y73479 P6_Gap ++
hg19:Y:18743732-A-G hg38:Y:16631852-A-G Y54837 YY++
hg19:Y:20808826-T-A hg38:Y:18646940-T-A Y56098 P4_Gap ++
hg19:Y:21305461-T-C hg38:Y:19143575-T-C Y56501 YY++
hg19:Y:21406193-G-T hg38:Y:19244307-G-T Y56647 YY++
hg19:Y:21658948-T-C hg38:Y:19497062-T-C Y57030 YY++
hg19:Y:21986426-A-C hg38:Y:19824540-A-C Y57471 YY++
hg19:Y:22273090-G-T hg38:Y:20111204-G-T S21825ZS11098 DYZ19 ++
hg19:Y:22462429-G-A hg38:Y:20300543-G-A BY220890 DYZ19 ++
hg19:Y:24432146-T-C hg38:Y:22285999-T-C Y59806 Y++
hg19:Y:13692354-T-A hg38:Y:11536678-T-A BY88720 DYZ17 +
hg19:Y:22461114-TA-T hg38:Y:20299228-TA-T DYZ19 +
hg19:Y:22461119-G-T hg38:Y:20299233-G-T BY22252 DYZ19 +
hg19:Y:22461121-G-T hg38:Y:20299235-G-T BY52822 DYZ19 +
hg19:Y:22508056-G-A hg38:Y:20346170-G-A BY225428 DYZ19 +
hg19:Y:24278185-A-AGAAAGAAG hg38:Y:22132038-A-AGAAAGAAG P3_b1 *
hg19:Y:22299987-C-A hg38:Y:20138101-C-A DYZ19 ****
hg19:Y:22319400-C-T hg38:Y:20157514-C-T DYZ19 ****
hg19:Y:22430610-T-A hg38:Y:20268724-T-A DYZ19 ****
hg19:Y:13722877-A-AGAATG hg38:Y:11567201-A-AGAATG DYZ17 10×GAATG*
hg19:Y:27398510-C-A hg38:Y:25252363-C-A P1_g3 23×A**
hg19:Y:15507783-G-GTT hg38:Y:13395903-G-GTT 25×T**
hg19:Y:22893304-C-T hg38:Y:20731418-C-T M8325 17×CTTT**
hg19:Y:2685644-C-T hg38:Y:2817603-C-T M8946 20×T**
hg19:Y:18872031-T-TTTCCTTCC hg38:Y:16760151-T-TTTCCTTCC 12×TTCC**
hg19:Y:22330070-G-T hg38:Y:20168184-G-T DYZ19 **
hg19:Y:2685634-C-T hg38:Y:2817593-C-T **
hg19:Y:2685629-C-T hg38:Y:2817588-C-T M4581 **
hg19:Y:7218297-GAC-G hg38:Y:7350256-GAC-G **
hg19:Y:14339125-TG-T hg38:Y:12218420-TG-T **
hg19:Y:18636631-A-T hg38:Y:16524751-A-T **
hg19:Y:22461050-C-G hg38:Y:20299164-C-G A11496 DYZ19 **
hg19:Y:13462255-G-A hg38:Y:11306579-G-A **
hg19:Y:26089917-C-CT hg38:Y:23943770-C-CT P1_Y1 10×T**
hg19:Y:4371093-A-G hg38:Y:4503052-A-G Z2423 **
hg19:Y:6579975-C-A hg38:Y:6711934-C-A **
hg19:Y:8389734-C-A hg38:Y:8521693-C-A **
hg19:Y:15146478-G-A hg38:Y:13034565-G-A **
hg19:Y:23651532-G-A hg38:Y:21489646-G-A Y3280 FGC12462 **
hg19:Y:13664737-T-C hg38:Y:11509061-T-C FT447633 DYZ17 *****
hg19:Y:26161205-T-C hg38:Y:24015058-T-C P1_Y1 *****
hg19:Y:21558714-A-T hg38:Y:19396828-A-T **
hg19:Y:14321325-GA-G hg38:Y:12200619-GA-G 10×A**
hg19:Y:58981527-A-T hg38:Y:56835380-A-T **
hg19:Y:22167224-C-CA hg38:Y:20005338-C-CA 29×A**
hg19:Y:20478262-C-T hg38:Y:18316376-C-T P5_Dst **
hg38:Y:10971881-G-C **
hg38:Y:10893691-T-A **
hg38:Y:10937482-C-T **
hg38:Y:10971087-T-C **
hg38:Y:10971091-A-T **
hg38:Y:10971094-C-G **
hg38:Y:10971139-C-T **
hg19:Y:18447640-C-CT hg38:Y:16335760-C-CT P6_Dst **
hg19:Y:2759989-C-A hg38:Y:2891948-C-A **
hg19:Y:15734252-C-A hg38:Y:13622372-C-A **
hg19:Y:19775284-G-T hg38:Y:17663404-G-T P5_Prx **
hg38:Y:10983527-A-C **
hg19:Y:22247361-G-A hg38:Y:20085475-G-A DYZ19 **
hg19:Y:26415675-TC-T hg38:Y:24269528-TC-T P1_Y1 **
hg38:Y:10887513-A-G **
hg19:Y:22874388-C-A hg38:Y:20712502-C-A **
hg19:Y:13482342-C-T hg38:Y:11326666-C-T **
hg38:Y:10989164-C-CTGCAT **
hg19:Y:16177215-C-A hg38:Y:14065335-C-A **
hg38:Y:10992973-C-T **
hg38:Y:10746898-C-G **
hg19:Y:4841433-G-T hg38:Y:4973392-G-T **
hg19:Y:3158968-C-A hg38:Y:3290927-C-A **
hg19:Y:13456186-T-A hg38:Y:11300510-T-A **
hg19:Y:4470491-C-A hg38:Y:4602450-C-A **
hg19:Y:18108621-AT-A hg38:Y:15996741-AT-A 8×T**
hg19:Y:15446986-C-A hg38:Y:13335106-C-A **
hg19:Y:7339835-C-A hg38:Y:7471794-C-A **
hg38:Y:10987007-T-C **
hg38:Y:10993013-CCACTG-C **
hg38:Y:10873088-C-G **
hg38:Y:10746922-C-T **
hg38:Y:10753192-T-C **
hg38:Y:11026100-C-T **
hg38:Y:10937491-G-A **
hg38:Y:10937505-A-T **
hg38:Y:10937507-A-T **
hg38:Y:11032169-T-A **
hg38:Y:10796128-G-C **
hg19:Y:26153981-G-T hg38:Y:24007834-G-T P1_Y1 **
hg19:Y:4281955-C-A hg38:Y:4413914-C-A **
hg19:Y:5796186-C-A hg38:Y:5928145-C-A **
hg19:Y:18950753-C-A hg38:Y:16838873-C-A **
hg38:Y:11026082-C-G **
hg19:Y:8698704-C-A hg38:Y:8830663-C-A **
hg19:Y:7829020-C-A hg38:Y:7960979-C-A **
hg19:Y:3229701-C-A hg38:Y:3361660-C-A **
hg19:Y:6816754-C-A hg38:Y:6948713-C-A **
hg38:Y:10992976-T-G **
hg38:Y:11026090-T-C **
hg19:Y:7222888-C-A hg38:Y:7354847-C-A **
hg38:Y:10975847-A-ACTCGT **
hg19:Y:21267870-C-A hg38:Y:19105984-C-A **
hg38:Y:10992964-C-A **
hg38:Y:10992993-C-G **
hg38:Y:10993004-C-A **
hg19:Y:20815844-C-A hg38:Y:18653958-C-A P4_Gap **
hg19:Y:28658345-C-A hg38:Y:26512198-C-A **
hg19:Y:13462270-AC-A hg38:Y:11306594-AC-A **
hg19:Y:13462287-A-G hg38:Y:11306611-A-G **
hg19:Y:13462297-C-T hg38:Y:11306621-C-T **
hg38:Y:11032091-C-A **
hg38:Y:11032108-A-G **
hg38:Y:11032109-C-T **
hg38:Y:11032116-T-C **
hg38:Y:11032119-T-C **
hg38:Y:11032144-A-T **
hg38:Y:11032151-C-T **
hg38:Y:11032166-C-T **
hg19:Y:9508016-T-A hg38:Y:9670407-T-A **
hg19:Y:6773330-C-A hg38:Y:6905289-C-A **
hg38:Y:10999865-A-T **
hg38:Y:10999875-A-T **
hg19:Y:7759253-TTC-T hg38:Y:7891212-TTC-T **
hg38:Y:10983465-A-C **
hg38:Y:10983470-G-C **
hg19:Y:4926162-G-T hg38:Y:5058121-G-T **
hg19:Y:13468223-A-C hg38:Y:11312547-A-C **
hg38:Y:56835400-CCAGTA-C **
hg19:Y:15655169-C-A hg38:Y:13543289-C-A **
hg19:Y:18384259-A-C hg38:Y:16272379-A-C P6_Gap **
hg38:Y:10796677-C-T **
hg19:Y:14846890-G-A hg38:Y:12734956-G-A **
hg19:Y:3123372-C-A hg38:Y:3255331-C-A **
hg19:Y:7381854-T-C hg38:Y:7513813-T-C **
hg38:Y:10937497-C-T **
hg19:Y:14285745-C-A hg38:Y:12165039-C-A **
hg19:Y:16952563-C-A hg38:Y:14840683-C-A **
hg38:Y:10783015-C-A **
hg19:Y:4527295-C-A hg38:Y:4659254-C-A **
hg19:Y:19379601-C-A hg38:Y:17267721-C-A **
hg19:Y:13478227-C-A hg38:Y:11322551-C-A **
hg19:Y:13659622-C-A hg38:Y:11503946-C-A DYZ17 **
hg19:Y:18756129-C-A hg38:Y:16644249-C-A **
hg19:Y:10033054-C-A hg38:Y:10195445-C-A **
hg38:Y:11013956-T-G **
hg38:Y:10796646-C-A **
hg19:Y:6934604-A-G hg38:Y:7066563-A-G **
hg19:Y:22063986-C-A hg38:Y:19902100-C-A **
hg19:Y:2753915-C-A hg38:Y:2885874-C-A **
hg19:Y:2784421-T-G hg38:Y:2916380-T-G **
hg19:Y:2832947-C-A hg38:Y:2964906-C-A **
hg19:Y:2860021-TC-T hg38:Y:2991980-TC-T **
hg19:Y:2861437-A-T hg38:Y:2993396-A-T **
hg19:Y:2909551-ATTT-A hg38:Y:3041510-ATTT-A 13×T**
hg19:Y:3073842-C-A hg38:Y:3205801-C-A **
hg19:Y:3079508-A-T hg38:Y:3211467-A-T **
hg19:Y:3079527-T-C hg38:Y:3211486-T-C **
hg19:Y:3286579-C-A hg38:Y:3418538-C-A **
hg19:Y:3331993-A-G hg38:Y:3463952-A-G **
hg19:Y:3385195-T-G hg38:Y:3517154-T-G **
hg19:Y:3591688-C-A hg38:Y:3723647-C-A **
hg19:Y:3815687-G-T hg38:Y:3947646-G-T **
hg19:Y:3849424-C-A hg38:Y:3981383-C-A **
hg19:Y:4002907-G-A hg38:Y:4134866-G-A **
hg19:Y:4235958-C-A hg38:Y:4367917-C-A **
hg19:Y:4271585-C-T hg38:Y:4403544-C-T **
hg19:Y:4357056-C-A hg38:Y:4489015-C-A **
hg19:Y:4388711-T-C hg38:Y:4520670-T-C **
hg19:Y:4437862-C-A hg38:Y:4569821-C-A **
hg19:Y:4460323-A-G hg38:Y:4592282-A-G **
hg19:Y:4510003-T-C hg38:Y:4641962-T-C **
hg19:Y:4521581-C-A hg38:Y:4653540-C-A **
hg19:Y:4604442-C-G hg38:Y:4736401-C-G **
hg19:Y:5110013-G-C hg38:Y:5241972-G-C **
hg19:Y:5113084-G-T hg38:Y:5245043-G-T **
hg19:Y:5421224-C-A hg38:Y:5553183-C-A **
hg19:Y:5635273-A-G hg38:Y:5767232-A-G **
hg19:Y:5799938-C-A hg38:Y:5931897-C-A **
hg19:Y:5829185-C-A hg38:Y:5961144-C-A **
hg19:Y:5871909-TC-T hg38:Y:6003868-TC-T **
hg19:Y:6252868-A-G hg38:Y:6384827-A-G IR3_Dst **
hg19:Y:6402638-C-A hg38:Y:6534597-C-A **
hg19:Y:6523177-C-A hg38:Y:6655136-C-A **
hg19:Y:6642980-C-A hg38:Y:6774939-C-A **
hg19:Y:6645928-C-A hg38:Y:6777887-C-A **
hg19:Y:6772224-C-A hg38:Y:6904183-C-A **
hg19:Y:6790301-G-T hg38:Y:6922260-G-T **
hg19:Y:6799266-C-T hg38:Y:6931225-C-T **
hg19:Y:6807365-G-A hg38:Y:6939324-G-A **
hg19:Y:6809461-C-A hg38:Y:6941420-C-A **
hg19:Y:6822552-A-C hg38:Y:6954511-A-C **
hg19:Y:6856657-C-A hg38:Y:6988616-C-A **
hg19:Y:6874821-C-A hg38:Y:7006780-C-A **
hg19:Y:6881611-C-A hg38:Y:7013570-C-A **
hg19:Y:6948467-G-A hg38:Y:7080426-G-A **
hg19:Y:6948471-A-G hg38:Y:7080430-A-G **
hg19:Y:6992532-C-A hg38:Y:7124491-C-A **
hg19:Y:7008656-C-A hg38:Y:7140615-C-A **
hg19:Y:7044978-C-A hg38:Y:7176937-C-A **
hg19:Y:7085242-A-T hg38:Y:7217201-A-T **
hg19:Y:7086968-C-A hg38:Y:7218927-C-A **
hg19:Y:7140822-C-A hg38:Y:7272781-C-A **
hg19:Y:7144050-A-G hg38:Y:7276009-A-G **
hg19:Y:7163157-C-A hg38:Y:7295116-C-A **
hg19:Y:7176062-A-G hg38:Y:7308021-A-G **
hg19:Y:7201590-C-A hg38:Y:7333549-C-A **
hg19:Y:7203678-A-T hg38:Y:7335637-A-T **
hg19:Y:7206883-T-C hg38:Y:7338842-T-C **
hg19:Y:7208037-C-A hg38:Y:7339996-C-A **
hg19:Y:7208560-A-G hg38:Y:7340519-A-G **
hg19:Y:7255261-A-G hg38:Y:7387220-A-G **
hg19:Y:7282749-C-A hg38:Y:7414708-C-A **
hg19:Y:7381829-A-G hg38:Y:7513788-A-G **
hg19:Y:7382514-C-A hg38:Y:7514473-C-A **
hg19:Y:7430500-C-A hg38:Y:7562459-C-A **
hg19:Y:7471032-C-A hg38:Y:7602991-C-A IR1_L **
hg19:Y:7572828-C-A hg38:Y:7704787-C-A **
hg19:Y:7572873-C-A hg38:Y:7704832-C-A **
hg19:Y:7649080-C-A hg38:Y:7781039-C-A **
hg19:Y:7657008-G-A hg38:Y:7788967-G-A **
hg19:Y:7774258-A-T hg38:Y:7906217-A-T **
hg19:Y:7824681-A-AT hg38:Y:7956640-A-AT **
hg19:Y:7829741-C-A hg38:Y:7961700-C-A **
hg19:Y:7897170-T-G hg38:Y:8029129-T-G **
hg19:Y:7917141-T-C hg38:Y:8049100-T-C **
hg19:Y:8073416-A-T hg38:Y:8205375-A-T **
hg19:Y:8075342-C-A hg38:Y:8207301-C-A **
hg19:Y:8140357-C-A hg38:Y:8272316-C-A **
hg19:Y:8172737-C-A hg38:Y:8304696-C-A **
hg19:Y:8230280-C-A hg38:Y:8362239-C-A **
hg19:Y:8253618-C-A hg38:Y:8385577-C-A **
hg19:Y:8556117-C-A hg38:Y:8688076-C-A **
hg19:Y:8720562-C-A hg38:Y:8852521-C-A FGC48761 **
hg19:Y:8741530-A-G hg38:Y:8873489-A-G **
hg19:Y:8824347-C-A hg38:Y:8956306-C-A **
hg19:Y:8968288-T-A hg38:Y:9130679-T-A **
hg19:Y:8974435-C-G hg38:Y:9136826-C-G **
hg19:Y:8988033-A-G hg38:Y:9150424-A-G **
hg19:Y:9140119-C-A hg38:Y:9302510-C-A **
hg19:Y:9354424-A-C hg38:Y:9516815-A-C **
hg19:Y:9383477-T-C hg38:Y:9545868-T-C **
hg19:Y:9423036-C-A hg38:Y:9585427-C-A **
hg19:Y:9524284-A-G hg38:Y:9686675-A-G **
hg19:Y:9769202-TACA-T hg38:Y:9931593-TACA-T **
hg19:Y:9839446-T-C hg38:Y:10001837-T-C **
hg19:Y:9983344-C-A hg38:Y:10145735-C-A **
hg19:Y:10009492-G-T hg38:Y:10171883-G-T **
hg38:Y:10652914-G-T **
hg38:Y:10657544-C-A **
hg38:Y:10658083-A-C FT370132 **
hg38:Y:10679542-C-A **
hg38:Y:10694143-T-C **
hg38:Y:10753201-A-G **
hg38:Y:10753222-TTC-T **
hg38:Y:10753225-C-CAAATAGA **
hg38:Y:10753231-A-T **
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hg19:Y:6427695-T-TA hg38:Y:6559654-T-TA 10×A***
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hg19:Y:22461102-T-C hg38:Y:20299216-T-C DYZ19 ******
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hg19:Y:25148088-G-A hg38:Y:23001941-G-A g1 ***
hg19:Y:25341008-A-T hg38:Y:23194861-A-T P2_r1 ***
hg19:Y:26660092-C-A hg38:Y:24513945-C-A P1_g2 ***
hg19:Y:28796668-C-A hg38:Y:26650521-C-A ***
hg19:Y:13866440-C-A,G hg38:Y:11745734-C-A,G DYZ17 ***
hg19:Y:18209106-GTAGA-G,GTAGG hg38:Y:16097226-GTAGA-G,GTAGG 12×TAGA***
hg19:Y:21265962-G-A hg38:Y:19104076-G-A BY131596 ***
hg19:Y:13489519-A-G hg38:Y:11333843-A-G ***
hg19:Y:24422580-G-C hg38:Y:22276433-G-C ***
hg19:Y:24422583-A-T hg38:Y:22276436-A-T ***
hg38:Y:56836746-TTCCAC-T ***
hg19:Y:28805775-A-T hg38:Y:26659628-A-T ***
hg38:Y:10746944-A-G ***
hg19:Y:13489629-CCACCCA-C,CCAACGA hg38:Y:11333953-CCACCCA-C,CCAACGA ***
hg19:Y:16301319-GA-G hg38:Y:14189439-GA-G 10×A***
hg38:Y:10746946-T-A ***
hg38:Y:10937456-A-T ***
hg19:Y:3271601-CTTT-C hg38:Y:3403560-CTTT-C 14×T***
hg38:Y:10937409-C-G ***
hg38:Y:10937431-A-T ***
hg19:Y:6464866-C-A hg38:Y:6596825-C-A ***
hg19:Y:14218887-C-A hg38:Y:12098181-C-A FT224150 ***
hg19:Y:2888675-C-T hg38:Y:3020634-C-T ***
hg19:Y:3732318-T-A hg38:Y:3864277-T-A ***
hg19:Y:4567252-T-C hg38:Y:4699211-T-C ***
hg19:Y:4701166-C-T hg38:Y:4833125-C-T ***
hg19:Y:4968556-C-A hg38:Y:5100515-C-A ***
hg19:Y:4968686-G-A hg38:Y:5100645-G-A ***
hg19:Y:6942753-A-G hg38:Y:7074712-A-G ***
hg19:Y:7184755-C-A hg38:Y:7316714-C-A ***
hg19:Y:7349357-C-A hg38:Y:7481316-C-A ***
hg19:Y:7723455-C-A hg38:Y:7855414-C-A ***
hg19:Y:9645799-C-A hg38:Y:9808190-C-A IR3_Prx ***
hg19:Y:9852985-A-AGAAG hg38:Y:10015376-A-AGAAG ***
hg19:Y:10017070-T-A hg38:Y:10179461-T-A FT38062 16×CA***
hg38:Y:10937424-G-A,C ***
hg19:Y:13226004-C-A hg38:Y:11070328-C-A ***
hg19:Y:13315981-C-A hg38:Y:11160305-C-A ***
hg19:Y:13460019-C-A hg38:Y:11304343-C-A ***
hg19:Y:13474845-C-A hg38:Y:11319169-C-A ***
hg19:Y:14028982-C-A hg38:Y:11908276-C-A ***
hg19:Y:14272721-CTGTTG-C hg38:Y:12152015-CTGTTG-C ***
hg19:Y:14398537-C-A hg38:Y:12277833-C-A ***
hg19:Y:14557650-A-T hg38:Y:12445851-A-T ***
hg19:Y:14639338-C-A hg38:Y:12527407-C-A ***
hg19:Y:15460473-C-A hg38:Y:13348593-C-A ***
hg19:Y:15604363-A-T hg38:Y:13492483-A-T ***
hg19:Y:15604367-A-T hg38:Y:13492487-A-T ***
hg19:Y:15604375-G-A hg38:Y:13492495-G-A ***
hg19:Y:15662561-C-A hg38:Y:13550681-C-A ***
hg19:Y:15722429-C-A hg38:Y:13610549-C-A ***
hg19:Y:16905935-C-A hg38:Y:14794055-C-A ***
hg19:Y:17711402-C-A hg38:Y:15599522-C-A ***
hg19:Y:17749663-C-A hg38:Y:15637783-C-A ***
hg19:Y:17973326-C-A hg38:Y:15861446-C-A ***
hg19:Y:18093659-C-A hg38:Y:15981779-C-A FGC30055 ***
hg19:Y:18713864-C-A hg38:Y:16601984-C-A ***
hg19:Y:18739678-C-A hg38:Y:16627798-C-A ***
hg19:Y:18911378-C-A hg38:Y:16799498-C-A ***
hg19:Y:18927932-C-A hg38:Y:16816052-C-A ***
hg19:Y:19042784-A-T hg38:Y:16930904-A-T ***
hg19:Y:19201357-A-C hg38:Y:17089477-A-C ***
hg19:Y:19304420-G-A hg38:Y:17192540-G-A Y104338 ***
hg19:Y:19472421-C-A hg38:Y:17360541-C-A ***
hg19:Y:19528846-C-A hg38:Y:17416966-C-A ***
hg19:Y:21130276-C-A hg38:Y:18968390-C-A ***
hg19:Y:21444361-T-C hg38:Y:19282475-T-C ***
hg19:Y:21884937-C-A hg38:Y:19723051-C-A ***
hg19:Y:21988910-C-A hg38:Y:19827024-C-A ***
hg19:Y:22068521-C-A hg38:Y:19906635-C-A ***
hg19:Y:22737231-CAAAAA-C,CAAAA hg38:Y:20575345-CAAAAA-C,CAAAA 18×A***
hg19:Y:23235902-C-A hg38:Y:21074016-C-A ***
hg19:Y:23380311-G-A hg38:Y:21218425-G-A ***
hg19:Y:23825522-G-T hg38:Y:21663636-G-T ***
hg19:Y:24404788-C-A hg38:Y:22258641-C-A ***
hg19:Y:28754543-C-A hg38:Y:26608396-C-A FT378700 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 2445761041713974924807577361
Kit: 244576924845775818907543554
Used in age calculations1041713975818907577361
Counts of SNPs2023
Variant counts last updated 2025-04-03 03:01:41.


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