Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > BY4086 > FGC17436 > Z17693 > S7897 > A495 > S7898 > S15280

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
190463
BigY2
190463
27996127-G-GA 25849980-G-GA P1_Y2 14×AA+
27974343-G-GT 25828196-G-GT P1_Y2 10×TA+
20040482-G-GGCAAGCAC 17928602-G-GGCAAGCAC P5_Prx 4×GCAAGCACA*
16131135-C-CT 14019255-C-CT P8_Prx 10×TA*
13810920-A-C 11690214-A-C A*
22224327-T-A 20062441-T-A DYZ19 ***A*
13810908-G-T 11690202-G-T A*
19999047-A-G 17887167-A-G P5_Prx ***A*
22474098-T-A 20312212-T-A DYZ19 +
9817509-T-C 9979900-T-C BY81186 YY++
22474024-T-C 20312138-T-C b38:7063438-C-GBY43963 DYZ19 ***+
22474015-A-T 20312129-A-T b38:7063438-C-GBY43962 DYZ19 ***+
22474014-G-A 20312128-G-A BY223054 DYZ19 ***+
22474004-G-C 20312118-G-C BY223051 DYZ19 ***+
22473996-A-C 20312110-A-C BY223048 DYZ19 ***+
22474117-T-C 20312231-T-C DYZ19 +
22039101-G-A 19877215-G-A BY156980 YY++
22476919-T-A 20315033-T-A BY223686 DYZ19 ++
18911984-G-A 16800104-G-A BY124740 YY++
17316208-A-T 15204328-A-T BY113753 YY++
16752996-G-A 14641116-G-A BY109819 YY++
16752988-T-A 14641108-T-A BY109818 YY++
23128186-A-G 20966300-A-G BY143182 Y**+
23166024-T-G 21004138-T-G BY143583 Y++
2724791-T-A 2856750-T-A BY56023 YY++
23189866-A-G 21027980-A-G Y79421 Y**+
23209249-GA-G 21047363-GA-G 9×A++
23298873-C-T 21136987-C-T BY157155 YY++
13450414-CATTCCATTCCATTCT-C 11294738-CATTCCATTCCATTCT-C *
22422644-T-A 20260758-T-A DYZ19 ****
10082082-T-G 10244473-T-G **
10624173-A-G **
10660899-C-A **
10674020-C-CTGT **
10674022-C-A **
10082056-G-A 10244447-G-A **
10674023-C-CA **
10082078-C-A 10244469-C-A **
9427488-C-G 9589879-C-G **
9414580-C-A 9576971-C-A **
10674033-A-G **
10686495-T-C **
10689069-AAT-A **
9884997-T-C 10047388-T-C **
10082055-T-C 10244446-T-C **
10033810-C-T 10196201-C-T **
9965275-C-A 10127666-C-A **
9983379-C-A 10145770-C-A **
9596570-C-CCT 9758961-C-CCT IR3_Prx **
10022032-C-A 10184423-C-A **
9482336-T-C 9644727-T-C **
10022939-C-A 10185330-C-A **
10023410-G-C 10185801-G-C **
10033336-C-A 10195727-C-A **
10080157-C-A 10242548-C-A **
10082050-A-G 10244441-A-G **
10081966-C-T 10244357-C-T **
10082015-A-T 10244406-A-T **
9457229-G-A 9619620-G-A **
10082027-C-A 10244418-C-A **
10082036-C-G 10244427-C-G **
10789351-A-G **
9444890-C-A 9607281-C-A **
9942156-A-C 10104547-A-C **
10689075-C-CTT **
10909555-T-G **
10789657-C-A **
13446575-C-A 11290899-C-A **
11034229-T-C **
13194298-T-G 11038622-T-G **
13217353-C-A 11061677-C-A **
13233407-G-A 11077731-G-A **
13290451-A-G 11134775-A-G **
13353628-C-T 11197952-C-T **
13434346-A-G 11278670-A-G **
13446581-A-T 11290905-A-T **
11016659-C-A **
13453337-T-A 11297661-T-A **
13454741-C-A 11299065-C-A **
13470261-C-A 11314585-C-A **
13477492-G-A 11321816-G-A BY85976 **
13527089-T-A 11371413-T-A **
13547004-T-A 11391328-T-A **
13551337-C-A 11395661-C-A **
11017578-C-A **
10977195-T-C **
10793943-C-A **
10909545-C-T **
10826928-C-A **
10841755-T-C **
10882067-C-CCGT **
10884222-C-A **
10909527-C-G **
10909529-C-A **
10909530-T-G **
10909551-G-A **
10967573-C-T **
8973139-G-T 9135530-G-T **
10937372-T-C **
10937381-A-T **
10937408-T-G **
10937411-A-T **
10948552-A-G **
10952605-C-A **
10967552-C-CCATTA **
9094453-C-A 9256844-C-A **
7359324-C-A 7491283-C-A **
9119418-G-T **
5243657-T-C 5375616-T-C **
4630779-T-C 4762738-T-C **
4747205-G-T 4879164-G-T **
4874761-G-T 5006720-G-T **
4936698-C-A 5068657-C-A **
5056959-A-T 5188918-A-T **
5117909-C-A 5249868-C-A **
5406808-G-T 5538767-G-T **
4466601-G-A 4598560-G-A **
5447246-A-G 5579205-A-G **
5524154-A-G 5656113-A-G **
5542489-T-A 5674448-T-A **
5607304-G-C 5739263-G-C **
5800377-A-C 5932336-A-C **
5842117-A-G 5974076-A-G **
5876522-A-C 6008481-A-C **
4467016-C-T 4598975-C-T **
4412244-TC-T 4544203-TC-T **
5911905-A-G 6043864-A-G **
3829122-G-A 3961081-G-A **
3621421-C-G 3753380-C-G **
3626860-T-C 3758819-T-C **
3650903-G-T 3782862-G-T **
3651571-G-T 3783530-G-T **
3711974-A-G 3843933-A-G **
3712066-T-G 3844025-T-G **
3813844-T-C 3945803-T-C **
3848312-C-G 3980271-C-G **
4145913-G-T 4277872-G-T **
3848404-T-G 3980363-T-G **
3990476-A-G 4122435-A-G **
3990490-A-C 4122449-A-C **
3990492-CT-C 4122451-CT-C **
4027402-C-A 4159361-C-A **
4069111-G-T 4201070-G-T **
4115121-G-T 4247080-G-T **
5909307-C-A 6041266-C-A **
5924429-C-A 6056388-C-A **
8855624-C-A 8987583-C-A **
7704890-A-G 7836849-A-G **
7246165-A-C 7378124-A-C **
7308107-C-A 7440066-C-A **
7311838-T-A 7443797-T-A **
7333890-A-C 7465849-A-C **
13603273-G-C 11447597-G-C **
7428134-C-G 7560093-C-G **
7444006-G-A 7575965-G-A **
7990282-C-G 8122241-C-G **
7170828-G-A 7302787-G-A **
7990602-C-G 8122561-C-G **
8043247-T-C 8175206-T-C **
8124908-C-A 8256867-C-A **
8172715-T-A 8304674-T-A **
8296881-C-A 8428840-C-A **
8720214-C-G 8852173-C-G **
8761830-C-A 8893789-C-A **
7237491-C-A 7369450-C-A **
7164372-G-T 7296331-G-T **
6507606-G-T 6639565-G-T **
6816580-T-C 6948539-T-C **
6523877-G-C 6655836-G-C **
6592389-C-A 6724348-C-A **
6596051-C-A 6728010-C-A **
6619476-A-T 6751435-A-T **
6630513-T-TC 6762472-T-TC **
6648056-C-A 6780015-C-A **
6752527-A-G 6884486-A-G **
6816779-C-G 6948738-C-G **
7134719-C-A 7266678-C-A **
6830464-T-A 6962423-T-A **
6953252-CAG-C 7085211-CAG-C **
7021793-C-A 7153752-C-A **
7053974-C-A 7185933-C-A **
7080861-G-T 7212820-G-T **
7111669-AT-A 7243628-AT-A **
7114737-G-T 7246696-G-T **
13567902-C-A 11412226-C-A **
14195929-C-A 12075223-C-A **
13604738-A-C 11449062-A-C **
21983959-G-C 19822073-G-C **
21329375-G-T 19167489-G-T **
21488849-G-T 19326963-G-T **
21874887-C-A 19713001-C-A **
21912477-C-A 19750591-C-A **
21915605-C-G 19753719-C-G **
21919442-C-A 19757556-C-A **
22080524-C-A 19918638-C-A **
21285422-G-C 19123536-G-C **
22300726-T-C 20138840-T-C DYZ19 **
22602345-G-A 20440459-G-A **
22668603-C-T 20506717-C-T **
22778578-T-G 20616692-T-G **
22787184-T-C 20625298-T-C **
22810732-A-T 20648846-A-T **
22836689-A-C 20674803-A-C **
21297251-T-A 19135365-T-A **
21248761-A-G 19086875-A-G **
22868717-G-T 20706831-G-T **
19682370-A-AGAAG 17570490-A-AGAAG P5_Prx **
19036818-C-A 16924938-C-A **
19056181-C-A 16944301-C-A **
19102758-C-A 16990878-C-A **
19331556-C-A 17219676-C-A FT118718 **
19512456-A-C 17400576-A-C **
19529122-T-C 17417242-T-C **
19584651-G-A 17472771-G-A P5_Prx **
19785857-A-G 17673977-A-G P5_Prx **
21037246-T-C 18875360-T-C **
19853724-C-G 17741844-C-G P5_Prx **
20089257-C-G 17977377-C-G P5_Dst **
20473634-T-TC 18311748-T-TC P5_Dst **
20473635-G-GTC 18311749-G-GTC P5_Dst **
20473638-G-T 18311752-G-T P5_Dst **
20473642-A-G 18311756-A-G P5_Dst **
20650591-T-A 18488705-T-A P4_Prx **
22855396-G-A 20693510-G-A **
22881376-T-G 20719490-T-G **
18911064-GA-G 16799184-GA-G **
28597214-CT-C 26451067-CT-C 8×T**
26153964-A-G 24007817-A-G P1_Y1 **
26314671-C-A 24168524-C-A P1_Y1 **
27417877-C-A 25271730-C-A P1_g3 **
27593272-C-A 25447125-C-A P1_Y2 **
27902163-C-A 25756016-C-A P1_Y2 **
28549909-G-T 26403762-G-T **
28591307-T-C 26445160-T-C **
28673777-C-A 26527630-C-A **
24475082-T-A 22328935-T-A **
28691261-T-A 26545114-T-A **
28691278-T-C 26545131-T-C **
28703184-A-T 26557037-A-T **
56827629-A-T **
56843921-C-T **
56843931-C-A **
56849505-A-C **
25912736-GA-G 23766589-GA-G P1_Y1 6×AAC**
24458709-C-T 22312562-C-T **
22995394-TTTTG-T 20833508-TTTTG-T **
23464822-A-C 21302936-A-C **
23126418-T-G 20964532-T-G **
23127864-A-G 20965978-A-G **
23211296-C-G 21049410-C-G **
23305903-T-G 21144017-T-G **
23316085-T-C 21154199-T-C **
23395977-A-G 21234091-A-G **
23448999-C-A 21287113-C-A **
23464995-C-T 21303109-C-T **
24406352-G-T 22260205-G-T **
23512264-T-C 21350378-T-C **
23953155-C-G 21807008-C-G **
23997121-G-C 21850974-G-C **
24127459-T-C 21981312-T-C P3_b1 **
24242199-T-A 22096052-T-A P3_b1 **
24363788-T-G 22217641-T-G **
24406289-G-C 22260142-G-C **
18989732-C-A 16877852-C-A **
18873983-A-C 16762103-A-C **
13612135-C-G 11456459-C-G **
14703572-T-A 12591638-T-A **
14448301-C-G 12327574-C-G **
14448312-T-A 12327585-T-A **
14485992-T-C 12365261-T-C **
14499709-G-T 12387914-G-T **
14565324-T-A 12453524-T-A **
14566574-A-T 12454774-A-T **
14727217-A-G 12615285-A-G **
14355420-G-A 12234715-G-A **
14786640-G-A 12674710-G-A **
15060594-C-A 12948686-C-A **
15073267-C-A 12961357-C-A **
15541662-A-G 13429782-A-G **
15575168-C-A 13463288-C-A **
15746216-T-A 13634336-T-A **
15763192-T-A 13651312-T-A **
14380931-G-C 12260227-G-C **
14273889-C-G 12153183-C-G **
16062811-C-A 13950931-C-A **
13895113-C-G 11774407-C-G **
13634567-C-A 11478891-C-A **
13692794-G-A 11537118-G-A **
11650782-G-T **
11655400-T-G **
11677504-A-G **
13895060-A-T 11774354-A-T **
13895074-A-G 11774368-A-G **
13919042-C-A 11798336-C-A **
14273399-C-T 12152693-C-T **
13934811-C-A 11814105-C-A **
13934845-T-C 11814139-T-C **
13976479-A-C 11855773-A-C **
14149386-A-G 12028680-A-G **
3394333-T-A 3526292-T-A **
14204800-T-C 12084094-T-C **
14236005-G-C 12115299-G-C **
15769515-C-A 13657635-C-A **
16067225-G-C 13955345-G-C **
18847868-A-G 16735988-A-G **
18518209-A-G 16406329-A-G P6_Dst **
17277338-A-G 15165458-A-G **
17963663-GT-G 15851783-GT-G 9×T**
17964254-A-G 15852374-A-G **
18054215-T-C 15942335-T-C **
18054219-A-G 15942339-A-G **
18054221-A-T 15942341-A-T **
18191472-C-T 16079592-C-T **
18616051-C-T 16504171-C-T **
17126104-GA-G 15014224-GA-G **
18616066-A-C 16504186-A-C **
18703139-T-C 16591259-T-C **
18703193-A-G 16591313-A-G **
18730765-T-A 16618885-T-A **
18736043-C-A 16624163-C-A **
18838586-G-A 16726706-G-A **
18847862-G-C 16735982-G-C **
17193022-G-A 15081142-G-A **
17070920-TA-T 14959040-TA-T **
16079275-T-C 13967395-T-C **
16607656-A-G 14495776-A-G **
16180460-C-T 14068580-C-T **
16320343-C-G 14208463-C-G **
16320351-C-T 14208471-C-T **
16320360-G-A 14208480-G-A **
16394443-C-A 14282563-C-A **
16429067-G-T 14317187-G-T **
16605217-G-C 14493337-G-C **
16621188-C-A 14509308-C-A **
16896326-G-C 14784446-G-C **
16625621-G-T 14513741-G-T **
16662677-C-A 14550797-C-A **
16675891-T-G 14564011-T-G **
16700410-CTAGA-C 14588530-CTAGA-C **
16842042-C-A 14730162-C-A **
16889788-C-A 14777908-C-A **
16896308-A-C 14784428-A-C **
3468349-C-A 3600308-C-A **
3358192-C-A 3490151-C-A **
3394241-T-A 3526200-T-A **
10840020-T-C **
14527177-C-A 12415378-C-A **
13998030-A-T 11877324-A-T **
28081885-CA-C 25935738-CA-C P1_Y2 **
4222647-C-A 4354606-C-A **
10839966-A-ACACGC **
10839996-C-CCACTCCACTA **
10821900-TC-T **
20089284-C-A 17977404-C-A P5_Dst **
10034459-C-A 10196850-C-A **
11005479-A-T **
11005498-C-CACACA **
28755787-C-A 26609640-C-A **
56825930-G-T **
16648321-GT-G 14536441-GT-G **
7334038-C-A 7465997-C-A **
11016541-C-A **
10976865-C-A **
2861418-C-A 2993377-C-A **
10659129-T-C **
18926872-CAAAAA-C 16814992-CAAAAA-C 17×A**
8051857-C-A 8183816-C-A **
19091406-GTT-G 16979526-GTT-G 14×T**
10660760-C-G **
13446570-C-A 11290894-C-A **
5796195-C-A 5928154-C-A **
7211166-C-A 7343125-C-A **
15157372-C-A 13045459-C-A **
10814522-G-T **
4215533-G-T 4347492-G-T **
17885975-G-T 15774095-G-T **
16562782-T-TAA 14450902-T-TAA 18×A**
16652090-C-A 14540210-C-A **
21368695-C-A 19206809-C-A **
9047979-AATT-A 9210370-AATT-A **
7287974-CTTT-C 7419933-CTTT-C 12×T**
5309500-T-A 5441459-T-A 11×A**
15420073-C-A 13308193-C-A **
10829225-C-A **
3610315-C-A 3742274-C-A **
3389954-T-A 3521913-T-A **
10661236-C-A **
22204865-G-T 20042979-G-T **
14518298-C-A 12406499-C-A FT93968 **
11034082-G-C **
10668438-G-T **
17842362-C-A 15730482-C-A **
8636076-C-A 8768035-C-A **
21912187-C-A 19750301-C-A **
7134706-C-A 7266665-C-A **
11660083-C-A **
20620907-A-AG 18459021-A-AG P4_Prx **
6516102-C-A 6648061-C-A **
14568849-C-A 12457049-C-A **
56849164-G-T **
22963529-C-A 20801643-C-A **
4417383-C-A 4549342-C-A **
3759219-C-A 3891178-C-A **
9975157-C-A 10137548-C-A **
16354691-C-A 14242811-C-A **
28764397-C-A 26618250-C-A **
8786732-T-C 8918691-T-C **
14735121-C-A 12623189-C-A **
10775882-T-C **
15687668-C-A 13575788-C-A **
5205277-C-A 5337236-C-A **
4533414-C-A 4665373-C-A **
9111305-G-T FT109127 **
4241682-C-A 4373641-C-A **
19056195-C-A 16944315-C-A **
6901228-C-A 7033187-C-A **
9937615-C-A 10100006-C-A **
17349199-C-T 15237319-C-T **
10024258-G-GTC 10186649-G-GTC **
13469597-C-A 11313921-C-A **
22914662-G-A 20752776-G-A **
21189667-TC-T 19027781-TC-T **
18747146-T-A 16635266-T-A **
58972071-C-G 56825924-C-G **
22446106-A-G 20284220-A-G DYZ19 **
58972074-T-G 56825927-T-G **
10082104-C-G 10244495-C-G **
3253829-C-A 3385788-C-A 18×A**
2903232-CTCCTTCCTTCCTTCCT-C 3035191-CTCCTTCCTTCCTTCCT-C 18×TCCT**
27240197-A-T 25094050-A-T P1_g3 **
22991279-C-A 20829393-C-A **
10081963-C-T 10244354-C-T **
15323661-C-CA 13211779-C-CA 18×A**
17527378-G-GTA 15415498-G-GTA 8×TA**
16316844-C-A 14204964-C-A **
5675470-G-T 5807429-G-T **
19129053-CTTTTT-C 17017173-CTTTTT-C 16×T**
15863210-C-A 13751330-C-A **
22474110-C-T 20312224-C-T DYZ19 **
27437-C-A **
22474090-G-T 20312204-G-T BY223066 DYZ19 **
2701335-A-G 2833294-A-G YSC0001335 ****
58972064-A-T 56825917-A-T **
13470893-C-A 11315217-C-A **
10082019-C-T 10244410-C-T **
10082023-C-A 10244414-C-A **
10082062-G-T 10244453-G-T **
4419900-C-T 4551859-C-T **
22474092-G-T 20312206-G-T DYZ19 **
28802553-T-G 26656406-T-G **
2881421-A-G 3013380-A-G **
7990263-C-A 8122222-C-A **
13639899-C-A 11484223-C-A **
22474106-T-A 20312220-T-A BY223073 DYZ19 **
22474107-T-G 20312221-T-G DYZ19 **
18953003-AAAAG-A 16841123-AAAAG-A 4×AAAG**
15894414-T-C 13782534-T-C **
10768941-T-C **
10999874-C-CCCTGCATTCGCTTTG **
4936641-C-A 5068600-C-A **
10689091-C-G **
10689093-A-T **
10689095-T-C **
10689144-A-C **
14272940-G-T 12152234-G-T **
13485594-C-G 11329918-C-G **
13488914-C-G 11333238-C-G A15084 **
10689033-C-A **
23952650-C-A 21806503-C-A **
3990498-T-C 4122457-T-C **
10808647-A-T **
20101660-G-A 17989780-G-A P5_Dst **
20101661-C-T 17989781-C-T P5_Dst **
10821899-C-A **
10764636-A-T **
13594265-C-A 11438589-C-A **
10689024-A-G **
10768942-C-A **
10764548-TTCAC-T **
10768955-C-T **
10768965-T-C **
17074672-G-T 14962792-G-T **
10937377-T-C **
15259278-CAAA-C 13147362-CAAA-C 15×A**
16629335-CAAAA-C 14517455-CAAAA-C 19×A**
24376232-G-A 22230085-G-A **
10937405-C-A **
19926999-G-A 17815119-G-A P5_Prx **
10801673-A-AATTCG **
10801684-T-A **
10801687-C-T **
10801693-A-G **
10801715-T-A **
10909560-G-C **
15276720-G-A 13164809-G-A **
10744478-C-CCA **
56859133-C-A **
16320329-T-C 14208449-T-C **
15126258-C-A 13014345-C-A **
10673602-C-A **
7322767-C-A 7454726-C-A **
9965083-C-A 10127474-C-A **
10693793-C-A **
14470342-C-A 12349611-C-A **
4964623-G-T 5096582-G-T **
14143426-C-CA 12022720-C-CA **
10909511-C-A **
56849510-T-C **
4533451-CA-C 4665410-CA-C 9×A**
10775887-T-C **
5366913-C-A 5498872-C-A **
3437047-G-T 3569006-G-T **
16146464-C-A 14034584-C-A P8_Dst **
7083030-A-G 7214989-A-G **
14815240-C-A 12703311-C-A **
11016417-C-A **
13198027-C-A 11042351-C-A **
7349118-C-T 7481077-C-T **
10816481-C-A **
14529234-C-CAAAA 12417435-C-CAAAA 15×A**
4093398-C-A 4225357-C-A **
14283469-C-A 12162763-C-A **
23007753-G-T 20845867-G-T **
23342019-C-A 21180133-C-A **
21201259-C-A 19039373-C-A **
16045448-C-A 13933568-C-A **
15894408-C-G 13782528-C-G **
28772047-C-A 26625900-C-A **
10816627-T-G **
16033467-C-A 13921587-C-A **
7368920-C-A 7500879-C-A **
18530986-G-T 16419106-G-T P6_Dst **
13213360-T-C 11057684-T-C **
3018635-G-A 3150594-G-A **
2906831-C-A 3038790-C-A **
2908972-C-A 3040931-C-A **
2949170-G-T 3081129-G-T FT165373 **
2980194-T-C 3112153-T-C **
3011519-G-A 3143478-G-A **
3013313-C-A 3145272-C-A **
3054871-G-T 3186830-G-T **
2884481-G-T 3016440-G-T **
3122356-C-A 3254315-C-A **
3131657-A-G 3263616-A-G **
3178152-C-A 3310111-C-A **
3227787-C-A 3359746-C-A **
3329432-G-C 3461391-G-C **
3389326-T-C 3521285-T-C **
2906771-A-C 3038730-A-C **
2884116-A-G 3016075-A-G **
15496973-C-A 13385093-C-A **
3250651-T-G 3382610-T-G **
14181292-G-T 12060586-G-T **
13935649-C-A 11814943-C-A **
14550256-C-A 12438457-C-A **
5818475-C-A 5950434-C-A **
10824256-C-A **
6682255-C-A 6814214-C-A **
10017991-C-A 10180382-C-A **
2773741-T-C 2905700-T-C **
23439903-TTG-T 21278017-TTG-T **
22122921-C-A 19961035-C-A **
22337747-A-T 20175861-A-T DYZ19 **
22168051-C-A 20006165-C-A **
23395808-C-A 21233922-C-A **
4779802-C-A 4911761-C-A **
6778883-C-A 6910842-C-A **
10833070-T-C **
16267175-C-A 14155295-C-A **
7359327-C-A 7491286-C-A **
7195220-T-C 7327179-T-C **
21428541-C-A 19266655-C-A **
13472172-A-G 11316496-A-G **
17569226-GAAAAAAAAAA-G 15457346-GAAAAAAAAAA-G 25×A**
13309581-C-A 11153905-C-A **
17387340-C-A 15275460-C-A **
9025483-C-A 9187874-C-A **
26204662-A-C 24058515-A-C P1_Y1 **
10082009-A-G 10244400-A-G **
8085438-CAAAAA-C 8217397-CAAAAA-C 15×A**
14295284-C-A 12174578-C-A **
10937401-A-C **
6582283-C-A 6714242-C-A **
10799636-A-T **
14527019-C-A 12415220-C-A **
10804979-C-A **
11018962-C-A **
23333909-C-A 21172023-C-A **
17136900-C-A 15025020-C-A **
18422747-C-A 16310867-C-A P6_Gap **
10015927-C-T 10178318-C-T **
19244775-C-A 17132895-C-A **
10937386-A-G **
9465230-C-A 9627621-C-A **
7030747-C-A 7162706-C-A **
10884256-C-A **
10884432-C-A **
56849148-T-C **
13520711-C-A 11365035-C-A **
18616060-T-C 16504180-T-C **
9926874-C-A 10089265-C-A **
3394359-G-T 3526318-G-T **
15320606-A-G 13208712-A-G **
14735096-C-A 12623164-C-A **
13206417-C-A 11050741-C-A **
3205858-C-CA 3337817-C-CA 15×A**
5627646-C-A 5759605-C-A **
27713359-G-T 25567212-G-T P1_Y2 **
13489480-A-G 11333804-A-G **
22854995-G-T 20693109-G-T **
22598768-A-G 20436882-A-G **
17571937-C-A 15460057-C-A **
3990503-T-TA 4122462-T-TA **
20473644-G-A 18311758-G-A P5_Dst **
6100906-G-T 6232865-G-T **
10799632-TTCCAC-T **
3990510-CA-C 4122469-CA-C **
13997789-G-T 11877083-G-T **
5796121-C-A 5928080-C-A **
23199746-ACCC-A 21037860-ACCC-A 11×C**
26310661-G-T 24164514-G-T P1_Y1 **
13482341-C-A 11326665-C-A **
22474068-C-T 20312182-C-T BY155313 DYZ19 ***
13449197-GAAATC-G 11293521-GAAATC-G ***
24916296-GT-G 22770149-GT-G g1 10×T***
3986224-T-A 4118183-T-A ***
13487419-G-T 11331743-G-T ***
17198461-A-AAGAGAG 15086581-A-AAGAGAG 18×AG***
6869659-C-CA 7001618-C-CA 10×A***
9216683-G-C 9379074-G-C ***
23460929-C-A 21299043-C-A ***
13460979-A-T 11305303-A-T ***
11034112-C-A ***
28611759-C-A 26465612-C-A ***
25171804-G-T 23025657-G-T g1 ***
25110401-C-T 22964254-C-T g1 ***
9181585-A-G 9343976-A-G ***
24162886-G-T 22016739-G-T P3_b1 ***
22474063-T-C 20312177-T-C BY188406 DYZ19 ***
13453418-T-A 11297742-T-A ***
3992045-G-A 4124004-G-A ***
22474077-G-T 20312191-G-T BY196850 DYZ19 ***
22265148-A-C 20103262-A-C DYZ19 ***
56834594-A-T ***
3274402-C-A 3406361-C-A ***
23186330-C-A 21024444-C-A ***
13194340-C-A 11038664-C-A ***
26942640-C-A 24796493-C-A P1_r3 ***
15178201-A-G 13066287-A-G ***
15404329-GAAA-G 13292449-GAAA-G 13×A***
13457995-C-A 11302319-C-A ***
22188682-AACACAC-A,AACAC 20026796-AACACAC-A,AACAC 23×AC***
56831066-C-A ***
4961410-G-T 5093369-G-T ***
10744301-C-A ***
18605023-C-A 16493143-C-A ***
15922107-G-T 13810227-G-T ***
13457964-TC-T 11302288-TC-T ***
8156645-TTGTATA-T 8288604-TTGTATA-T ***
9852651-T-C 10015042-T-C ***
17014594-C-A 14902714-C-A ***
19231319-CTTT-C 17119439-CTTT-C 24×T***
6916025-C-A 7047984-C-A ***
9029915-G-T 9192306-G-T ***
15497164-T-TA 13385284-T-TA 9×A***
7269610-CTTTTT-C 7401569-CTTTTT-C 22×T***
4223877-G-A 4355836-G-A ***
4412303-A-G 4544262-A-G ***
5535067-G-A 5667026-G-A ***
10893966-C-G ***
11643793-G-C ***
10682507-C-CATTGTACTCT ***
14844388-C-A 12732454-C-A ***
13317983-C-A 11162307-C-A A17120 ***
19436726-AAGAAAGAAAGAA-A,AAGAAAGAAAG 17324846-AAGAAAGAAAGAA-A,AAGAAAGAAAG ***
21238067-A-G 19076181-A-G ***
21457659-G-T 19295773-G-T ***
5967840-CA-C 6099799-CA-C ***
14746176-CAAAA-C 12634245-CAAAA-C 19×A***
10694099-C-A ***
10012706-C-A 10175097-C-A ***
19517454-T-C 17405574-T-C ***
13194525-C-G 11038849-C-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 1904631084594978758317961891
Kit: 190463981701780143187924594
Used in age calculations1084594980143187961891
Counts of SNPs118
Variant counts last updated 2019-10-28 04:25:55.



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