Zoll
FTDNA: 415378, BigY2: 415378Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 415378 | BigY2 415378 |
---|---|---|---|---|---|---|---|---|---|
19961670-G-A | 17849790-G-A | P5_Prx | *** | A* | |||||
16119955-A-G | 14008075-A-G | P8_Prx | *** | A* | |||||
25955122-T-C | 23808975-T-C | P1_Y1 | *** | A* | |||||
23072572-A-AAAAAC | 20910686-A-AAAAAC | 6×AAAAC | + | * | |||||
5818221-C-A | 5950180-C-A | BY58859 | ** | + | |||||
6632160-G-A | 6764119-G-A | BY60425 | Y | Y | + | + | |||
6959556-AAAAG-A | 7091515-AAAAG-A | + | + | ||||||
7329987-G-T | 7461946-G-T | BY64609 | Y | Y | + | + | |||
8020891-T-G | 8152850-T-G | BY69410 | Y | Y | + | + | |||
8141664-G-A | 8273623-G-A | BY70255 | Y | Y | + | + | |||
8366019-G-T | 8497978-G-T | FT179331 | Y | Y | + | + | |||
10019369-C-A | 10181760-C-A | BY53988 | Y | *** | + | ||||
14223429-A-G | 12102723-A-G | BY94047 | Y | Y | + | + | |||
14285562-G-A | 12164856-G-A | BY94568 | Y | Y | + | + | |||
14322010-A-G | 12201304-A-G | BY94845 | Y | Y | + | + | |||
15508353-C-T | 13396473-C-T | BY102068 | Y | Y | + | + | |||
16643743-A-G | 14531863-A-G | BY109185 | Y | Y | + | + | |||
16791594-G-GTGA | 14679714-G-GTGA | + | + | ||||||
17239649-A-G | 15127769-A-G | BY113222 | Y | Y | + | + | |||
17443268-A-G | 15331388-A-G | BY114838 | Y | Y | + | + | |||
17456709-A-G | 15344829-A-G | BY114913 | Y | Y | + | + | |||
17578752-C-T | 15466872-C-T | Z38374 | Y | Y | + | + | |||
18128175-T-G | 16016295-T-G | BY120308 | Y | Y | + | + | |||
18421164-T-G | 16309284-T-G | BY121882 | P6_Gap | + | + | ||||
21259720-T-C | 19097834-T-C | BY131519 | Y | Y | + | + | |||
21263895-T-C | 19102009-T-C | BY131565 | Y | Y | + | + | |||
21590774-T-C | 19428888-T-C | BY134024 | Y | Y | + | + | |||
22516426-A-T | 20354540-A-T | BY138623 | Y | + | + | ||||
22633143-T-C | 20471257-T-C | BY139665 | Y | + | + | ||||
23033705-G-A | 20871819-G-A | BY142460 | Y | Y | + | + | |||
23806089-G-A | 21644203-G-A | BY147845 | Y | + | + | ||||
23806218-G-T | 21644332-G-T | BY147848 | Y | + | + | ||||
23975604-G-T | 21829457-G-T | BY148927 | Y | + | + | ||||
9046164-T-TG | 9208555-T-TG | + | |||||||
22317439-A-G | 20155553-A-G | DYZ19 | *** | * | |||||
8465930-GTATT-G | 8597889-GTATT-G | ** | |||||||
15870715-G-C | 13758835-G-C | Y5535 FGC32242 | ** | ||||||
21923975-G-A | 19762089-G-A | Y29364 | ** | ||||||
9183719-T-C | 9346110-T-C | *** | ** | ||||||
22296092-C-T | 20134206-C-T | DYZ19 | ** | ||||||
22428523-G-T | 20266637-G-T | DYZ19 | ** | ||||||
28804865-G-A | 26658718-G-A | BY188756 | *** | ** | |||||
13458826-C-A | 11303150-C-A | ** | |||||||
23512160-C-A | 21350274-C-A | ** | |||||||
14844400-C-A | 12732466-C-A | ** | |||||||
13489399-G-A | 11333723-G-A | ** | |||||||
13489416-G-C | 11333740-G-C | ** | |||||||
22637682-A-G | 20475796-A-G | ** | |||||||
22914070-C-A | 20752184-C-A | ** | |||||||
16568095-C-A | 14456215-C-A | ** | |||||||
9958851-C-A | 10121242-C-A | ** | |||||||
13643920-C-A | 11488244-C-A | ** | |||||||
13489476-G-T | 11333800-G-T | ** | |||||||
14517348-C-A | 12405549-C-A | ** | |||||||
10657251-A-C | ** | ||||||||
6375703-G-T | 6507662-G-T | ** | |||||||
15490641-C-A | 13378761-C-A | ** | |||||||
13330304-C-A | 11174628-C-A | ** | |||||||
16232210-C-A | 14120330-C-A | ** | |||||||
16197334-C-A | 14085454-C-A | ** | |||||||
5459184-C-A | 5591143-C-A | ** | |||||||
18848574-G-T | 16736694-G-T | FTA28903 | ** | ||||||
56827512-C-A | ** | ||||||||
17707375-TCAA-T | 15595495-TCAA-T | ** | |||||||
18629927-C-A | 16518047-C-A | ** | |||||||
3092038-C-A | 3223997-C-A | ** | |||||||
17589080-C-A | 15477200-C-A | ** | |||||||
6293371-TTG-T | 6425330-TTG-T | IR3_Dst | ** | ||||||
16243167-C-A | 14131287-C-A | ** | |||||||
9423095-C-A | 9585486-C-A | ** | |||||||
7116382-C-A | 7248341-C-A | ** | |||||||
16552947-C-A | 14441067-C-A | ** | |||||||
56830860-C-A | ** | ||||||||
22637686-G-A | 20475800-G-A | ** | |||||||
22637690-T-G | 20475804-T-G | ** | |||||||
22637694-A-G | 20475808-A-G | ** | |||||||
28081887-C-CAA | 25935740-C-CAA | P1_Y2 | ** | ||||||
10900833-C-A | ** | ||||||||
22653268-C-A | 20491382-C-A | ** | |||||||
14363436-C-A | 12242731-C-A | ** | |||||||
7108615-G-A | 7240574-G-A | 9×TA | ** | ||||||
18927402-C-A | 16815522-C-A | ** | |||||||
9440212-C-A | 9602603-C-A | ** | |||||||
18782044-C-A | 16670164-C-A | ** | |||||||
6490918-C-A | 6622877-C-A | ** | |||||||
22864433-C-T | 20702547-C-T | ** | |||||||
15687648-C-A | 13575768-C-A | ** | |||||||
11643802-T-A | DYZ17 | ** | |||||||
22289376-C-A | 20127490-C-A | DYZ19 | ** | ||||||
20614944-C-A | 18453058-C-A | P4_Prx | ** | ||||||
17159121-T-C | 15047241-T-C | ** | |||||||
28548556-C-A | 26402409-C-A | ** | |||||||
21110078-C-A | 18948192-C-A | ** | |||||||
22864407-G-A | 20702521-G-A | ** | |||||||
6147480-C-T | 6279439-C-T | IR3_Dst | ** | ||||||
26243447-AAG-A | 24097300-AAG-A | P1_Y1 | ** | ||||||
4241651-C-A | 4373610-C-A | ** | |||||||
3559735-C-A | 3691694-C-A | ** | |||||||
8215023-C-A | 8346982-C-A | ** | |||||||
56828338-C-G | ** | ||||||||
14764464-G-C | 12652533-G-C | ** | |||||||
17074042-C-A | 14962162-C-A | ** | |||||||
8284534-C-A | 8416493-C-A | ** | |||||||
19373885-A-G | 17262005-A-G | ** | |||||||
5200345-G-T | 5332304-G-T | ** | |||||||
14103030-C-A | 11982324-C-A | ** | |||||||
6780786-G-A | 6912745-G-A | ** | |||||||
21318336-G-T | 19156450-G-T | ** | |||||||
10968503-C-A | ** | ||||||||
6765542-C-A | 6897501-C-A | ** | |||||||
8008893-C-A | 8140852-C-A | ** | |||||||
16941495-C-A | 14829615-C-A | ** | |||||||
21239060-C-A | 19077174-C-A | ** | |||||||
3833649-T-C | 3965608-T-C | ** | |||||||
13626794-C-A | 11471118-C-A | ** | |||||||
15080194-C-A | 12968284-C-A | ** | |||||||
6913748-C-A | 7045707-C-A | ** | |||||||
4872409-C-A | 5004368-C-A | ** | |||||||
23741938-C-A | 21580052-C-A | ** | |||||||
18824537-C-A | 16712657-C-A | ** | |||||||
19201372-C-A | 17089492-C-A | ** | |||||||
2738707-C-G | 2870666-C-G | ** | |||||||
2760066-C-A | 2892025-C-A | ** | |||||||
2793742-C-T | 2925701-C-T | ** | |||||||
2795717-C-A | 2927676-C-A | ** | |||||||
2797211-G-A | 2929170-G-A | ** | |||||||
3122517-C-A | 3254476-C-A | ** | |||||||
3992888-C-T | 4124847-C-T | ** | |||||||
4038224-G-T | 4170183-G-T | ** | |||||||
4261849-T-C | 4393808-T-C | ** | |||||||
4447323-A-G | 4579282-A-G | ** | |||||||
4470963-C-A | 4602922-C-A | ** | |||||||
4484880-C-A | 4616839-C-A | FGC56910 | ** | ||||||
4630453-G-T | 4762412-G-T | ** | |||||||
4907368-G-T | 5039327-G-T | ** | |||||||
5134091-A-AG | 5266050-A-AG | ** | |||||||
5179777-C-A | 5311736-C-A | ** | |||||||
5230879-G-T | 5362838-G-T | ** | |||||||
5789894-C-A | 5921853-C-A | ** | |||||||
5796691-G-T | 5928650-G-T | ** | |||||||
5957026-C-T | 6088985-C-T | ** | |||||||
6037890-A-C | 6169849-A-C | ** | |||||||
6392660-A-G | 6524619-A-G | ** | |||||||
6464863-G-T | 6596822-G-T | ** | |||||||
6576635-T-G | 6708594-T-G | ** | |||||||
6756906-CT-C | 6888865-CT-C | ** | |||||||
6779855-G-A | 6911814-G-A | ** | |||||||
6780802-T-C | 6912761-T-C | ** | |||||||
6780803-G-A | 6912762-G-A | ** | |||||||
6840889-C-A | 6972848-C-A | ** | |||||||
6848046-C-A | 6980005-C-A | ** | |||||||
6915941-C-A | 7047900-C-A | ** | |||||||
6949323-T-C | 7081282-T-C | ** | |||||||
6983589-CTGTGTGTG-C | 7115548-CTGTGTGTG-C | 20×TG | ** | ||||||
6994507-G-A | 7126466-G-A | ** | |||||||
7018113-C-A | 7150072-C-A | ** | |||||||
7078199-C-T | 7210158-C-T | ** | |||||||
7078223-G-T | 7210182-G-T | ** | |||||||
7103279-C-A | 7235238-C-A | ** | |||||||
7127201-TACA-T | 7259160-TACA-T | ** | |||||||
7172690-A-T | 7304649-A-T | ** | |||||||
7172712-A-T | 7304671-A-T | ** | |||||||
7238246-C-T | 7370205-C-T | ** | |||||||
7239824-C-A | 7371783-C-A | ** | |||||||
7240420-ATTAC-A | 7372379-ATTAC-A | ** | |||||||
7310483-T-C | 7442442-T-C | ** | |||||||
7311117-A-G | 7443076-A-G | ** | |||||||
7335029-C-A | 7466988-C-A | ** | |||||||
7541017-T-C | 7672976-T-C | ** | |||||||
7579141-C-A | 7711100-C-A | ** | |||||||
7690218-T-C | 7822177-T-C | ** | |||||||
7705553-G-T | 7837512-G-T | ** | |||||||
7735080-A-T | 7867039-A-T | ** | |||||||
7777173-C-A | 7909132-C-A | ** | |||||||
7801194-T-G | 7933153-T-G | FT83412 | ** | ||||||
7825320-C-A | 7957279-C-A | ** | |||||||
7825383-G-C | 7957342-G-C | ** | |||||||
7958389-C-A | 8090348-C-A | ** | |||||||
8228457-C-A | 8360416-C-A | ** | |||||||
8232225-C-A | 8364184-C-A | ** | |||||||
8353084-C-A | 8485043-C-A | ** | |||||||
8441147-C-A | 8573106-C-A | ** | |||||||
8456600-G-A | 8588559-G-A | ** | |||||||
8585591-G-A | 8717550-G-A | ** | |||||||
8748273-C-A | 8880232-C-A | ** | |||||||
9030076-G-T | 9192467-G-T | ** | |||||||
9075361-T-A | 9237752-T-A | ** | |||||||
9075369-A-C | 9237760-A-C | ** | |||||||
9075377-T-C | 9237768-T-C | ** | |||||||
9165326-C-A | 9327717-C-A | ** | |||||||
9221717-C-CTG | 9384108-C-CTG | ** | |||||||
9460891-T-G | 9623282-T-G | ** | |||||||
9461450-C-A | 9623841-C-A | ** | |||||||
9464332-C-A | 9626723-C-A | ** | |||||||
9478191-G-T | 9640582-G-T | ** | |||||||
9512032-C-T | 9674423-C-T | ** | |||||||
9515585-G-A | 9677976-G-A | ** | |||||||
9642480-C-A | 9804871-C-A | IR3_Prx | ** | ||||||
9810916-G-A | 9973307-G-A | ** | |||||||
9976521-G-T | 10138912-G-T | ** | |||||||
9983915-C-A | 10146306-C-A | ** | |||||||
10033652-C-A | 10196043-C-A | ** | |||||||
10825632-C-A | ** | ||||||||
10956594-C-CATAACGTATG | ** | ||||||||
13196247-T-TCACTC | 11040571-T-TCACTC | 5×CACTC | ** | ||||||
13212122-C-A | 11056446-C-A | ** | |||||||
13220139-C-A | 11064463-C-A | ** | |||||||
13362187-C-A | 11206511-C-A | ** | |||||||
13449495-A-C | 11293819-A-C | ** | |||||||
13449502-C-A | 11293826-C-A | ** | |||||||
13450127-CATTCT-C | 11294451-CATTCT-C | ** | |||||||
13452033-C-A | 11296357-C-A | ** | |||||||
13470856-G-A | 11315180-G-A | ** | |||||||
13478340-C-T | 11322664-C-T | ** | |||||||
13483405-A-C | 11327729-A-C | ** | |||||||
13483414-T-A | 11327738-T-A | ** | |||||||
13483436-G-A | 11327760-G-A | ** | |||||||
13489627-C-CCAA | 11333951-C-CCAA | ** | |||||||
13489630-C-CCT | 11333954-C-CCT | ** | |||||||
13507112-C-T | 11351436-C-T | ** | |||||||
13596735-T-A | 11441059-T-A | ** | |||||||
11676644-C-T | FT451444 | DYZ17 | ** | ||||||
13805130-C-A | 11684424-C-A | DYZ17 | ** | ||||||
13827130-A-C | 11706424-A-C | DYZ17 | ** | ||||||
13840718-C-A | 11720012-C-A | DYZ17 | ** | ||||||
13866289-G-A | 11745583-G-A | DYZ17 | ** | ||||||
13869294-T-A | 11748588-T-A | DYZ17 | ** | ||||||
13902736-G-A | 11782030-G-A | ** | |||||||
13909721-A-C | 11789015-A-C | ** | |||||||
13940722-G-T | 11820016-G-T | ** | |||||||
14106828-C-T | 11986122-C-T | ** | |||||||
14180980-A-G | 12060274-A-G | ** | |||||||
14198580-A-G | 12077874-A-G | ** | |||||||
14218310-A-T | 12097604-A-T | ** | |||||||
14281846-GCAATGGAACTGTTTTCCAAGGGT-G | 12161140-GCAATGGAACTGTTTTCCAAGGGT-G | ** | |||||||
14286614-C-A | 12165908-C-A | ** | |||||||
14351999-C-A | 12231294-C-A | ** | |||||||
14426994-C-A | 12306269-C-A | ** | |||||||
14432410-C-A | 12311683-C-A | ** | |||||||
14475796-A-G | 12355065-A-G | ** | |||||||
14484350-C-A | 12363619-C-A | ** | |||||||
14511502-G-T | 12399707-G-T | ** | |||||||
14539752-C-A | 12427953-C-A | ** | |||||||
14558672-G-T | 12446873-G-T | ** | |||||||
14595424-C-A | 12483624-C-A | ** | |||||||
14610733-G-A | 12498935-G-A | FT21511 | ** | ||||||
14614089-C-A | 12502287-C-A | ** | |||||||
14717731-G-T | 12605799-G-T | ** | |||||||
14728776-A-G | 12616844-A-G | ** | |||||||
14764477-A-T | 12652546-A-T | ** | |||||||
14764481-T-A | 12652550-T-A | ** | |||||||
14764490-C-T | 12652559-C-T | ** | |||||||
14764491-C-G | 12652560-C-G | ** | |||||||
14778900-A-C | 12666970-A-C | ** | |||||||
14795022-G-A | 12683093-G-A | FTB81133 | ** | ||||||
14886295-G-A | 12774361-G-A | ** | |||||||
14970787-C-A | 12858862-C-A | ** | |||||||
15011890-G-T | 12899978-G-T | ** | |||||||
15232240-A-G | 13120326-A-G | ** | |||||||
15290198-C-A | 13178297-C-A | ** | |||||||
15352878-ATT-A | 13240997-ATT-A | ** | |||||||
15458093-C-A | 13346213-C-A | ** | |||||||
15462718-G-T | 13350838-G-T | ** | |||||||
15472036-C-A | 13360156-C-A | ** | |||||||
15515162-A-G | 13403282-A-G | ** | |||||||
15536179-G-A | 13424299-G-A | ** | |||||||
15663989-A-T | 13552109-A-T | ** | |||||||
15677843-C-A | 13565963-C-A | ** | |||||||
15717668-C-A | 13605788-C-A | ** | |||||||
15719591-C-A | 13607711-C-A | ** | |||||||
15721105-A-G | 13609225-A-G | ** | |||||||
15832261-C-A | 13720381-C-A | ** | |||||||
15863280-A-G | 13751400-A-G | ** | |||||||
15951999-C-T | 13840119-C-T | ** | |||||||
15974043-C-A | 13862163-C-A | ** | |||||||
16018913-A-G | 13907033-A-G | ** | |||||||
16032970-TA-T | 13921090-TA-T | ** | |||||||
16085394-C-A | 13973514-C-A | ** | |||||||
16176597-A-G | 14064717-A-G | ** | |||||||
16188823-C-A | 14076943-C-A | ** | |||||||
16238552-G-C | 14126672-G-C | FT83762 | ** | ||||||
16352068-G-T | 14240188-G-T | ** | |||||||
16428518-A-G | 14316638-A-G | ** | |||||||
16454341-C-A | 14342461-C-A | ** | |||||||
16528044-C-A | 14416164-C-A | ** | |||||||
16729885-A-G | 14618005-A-G | ** | |||||||
16761368-T-C | 14649488-T-C | ** | |||||||
16784315-G-A | 14672435-G-A | ** | |||||||
16826512-C-A | 14714632-C-A | ** | |||||||
16971169-A-G | 14859289-A-G | ** | |||||||
16988956-A-G | 14877076-A-G | ** | |||||||
17023375-C-A | 14911495-C-A | ** | |||||||
17101665-C-A | 14989785-C-A | ** | |||||||
17128694-C-A | 15016814-C-A | ** | |||||||
17159112-A-G | 15047232-A-G | ** | |||||||
17159132-A-G | 15047252-A-G | ** | |||||||
17199449-T-G | 15087569-T-G | ** | |||||||
17220495-C-A | 15108615-C-A | ** | |||||||
17612903-T-C | 15501023-T-C | ** | |||||||
17633669-T-C | 15521789-T-C | ** | |||||||
17647491-C-A | 15535611-C-A | ** | |||||||
17672835-C-A | 15560955-C-A | ** | |||||||
17741433-G-T | 15629553-G-T | ** | |||||||
17918603-C-A | 15806723-C-A | ** | |||||||
17925280-C-A | 15813400-C-A | ** | |||||||
17978557-A-T | 15866677-A-T | ** | |||||||
18147679-C-A | 16035799-C-A | ** | |||||||
18266156-C-A | 16154276-C-A | ** | |||||||
18406814-A-G | 16294934-A-G | P6_Gap | ** | ||||||
18512350-G-A | 16400470-G-A | P6_Dst | ** | ||||||
18662429-TA-T | 16550549-TA-T | ** | |||||||
18836193-T-C | 16724313-T-C | ** | |||||||
18951961-A-G | 16840081-A-G | ** | |||||||
19168625-T-C | 17056745-T-C | ** | |||||||
19206570-A-G | 17094690-A-G | ** | |||||||
19250316-G-T | 17138436-G-T | ** | |||||||
19356520-T-C | 17244640-T-C | ** | |||||||
19402715-G-T | 17290835-G-T | ** | |||||||
19412401-C-A | 17300521-C-A | ** | |||||||
19450030-T-C | 17338150-T-C | ** | |||||||
19461202-C-A | 17349322-C-A | ** | |||||||
19461793-C-A | 17349913-C-A | ** | |||||||
19479498-G-A | 17367618-G-A | ** | |||||||
19520714-T-A | 17408834-T-A | ** | |||||||
19525193-C-A | 17413313-C-A | ** | |||||||
19599930-A-G | 17488050-A-G | P5_Prx | ** | ||||||
19818820-A-G | 17706940-A-G | P5_Prx | ** | ||||||
20001933-C-A | 17890053-C-A | P5_Prx | ** | ||||||
20727532-T-TA | 18565646-T-TA | P4_Prx | ** | ||||||
20872434-ATTTTT-A | 18710548-ATTTTT-A | P4_Dst | 25×T | ** | |||||
20881862-C-CAAAA | 18719976-C-CAAAA | P4_Dst | 16×A | ** | |||||
21090208-C-T | 18928322-C-T | ** | |||||||
21147821-C-A | 18985935-C-A | ** | |||||||
21220461-T-C | 19058575-T-C | ** | |||||||
21328289-G-C | 19166403-G-C | BY188151 | ** | ||||||
21372471-C-A | 19210585-C-A | ** | |||||||
21387325-T-G | 19225439-T-G | ** | |||||||
21391720-C-A | 19229834-C-A | ** | |||||||
21433288-C-A | 19271402-C-A | ** | |||||||
21489119-G-T | 19327233-G-T | ** | |||||||
21546184-T-A | 19384298-T-A | ** | |||||||
21604250-C-A | 19442364-C-A | ** | |||||||
21725360-C-T | 19563474-C-T | ** | |||||||
21725367-C-T | 19563481-C-T | ** | |||||||
22055530-C-A | 19893644-C-A | ** | |||||||
22238489-T-A | 20076603-T-A | BY52138 | DYZ19 | ** | |||||
22294854-T-A | 20132968-T-A | DYZ19 | ** | ||||||
22301211-T-A | 20139325-T-A | BY188755 | DYZ19 | ** | |||||
22537226-T-C | 20375340-T-C | ** | |||||||
22561305-A-G | 20399419-A-G | ** | |||||||
22629388-C-A | 20467502-C-A | ** | |||||||
22629923-TA-T | 20468037-TA-T | ** | |||||||
22658210-G-T | 20496324-G-T | ** | |||||||
22749378-G-T | 20587492-G-T | ** | |||||||
22864417-C-G | 20702531-C-G | ** | |||||||
22880840-G-A | 20718954-G-A | ** | |||||||
22897773-T-C | 20735887-T-C | ** | |||||||
23010299-G-T | 20848413-G-T | FT237966 | ** | ||||||
23097227-C-A | 20935341-C-A | ** | |||||||
23255098-A-G | 21093212-A-G | ** | |||||||
23272864-CT-C | 21110978-CT-C | ** | |||||||
23412560-C-A | 21250674-C-A | ** | |||||||
23465968-G-T | 21304082-G-T | ** | |||||||
23779985-A-G | 21618099-A-G | ** | |||||||
23992022-C-A | 21845875-C-A | ** | |||||||
23994070-T-A | 21847923-T-A | ** | |||||||
24477421-C-A | 22331274-C-A | ** | |||||||
24513756-C-A | 22367609-C-A | ** | |||||||
25651823-CT-C | 23505676-CT-C | P1_b3 | ** | ||||||
26106057-C-A | 23959910-C-A | P1_Y1 | ** | ||||||
26234898-A-AGAG | 24088751-A-AGAG | P1_Y1 | ** | ||||||
26234992-G-T | 24088845-G-T | P1_Y1 | ** | ||||||
27699931-C-T | 25553784-C-T | P1_Y2 | ** | ||||||
28562279-A-G | 26416132-A-G | ** | |||||||
28803603-G-C | 26657456-G-C | FT462268 | ** | ||||||
9308-C-T | ** | ||||||||
28793217-C-G | 26647070-C-G | *** | |||||||
22318104-T-C | 20156218-T-C | DYZ19 | *** | ||||||
22340050-T-C | 20178164-T-C | DYZ19 | *** | ||||||
8651208-TTG-T | 8783167-TTG-T | *** | |||||||
7349941-C-A | 7481900-C-A | *** | *** | ||||||
22259206-A-G | 20097320-A-G | DYZ19 | *** | ||||||
22282427-G-T | 20120541-G-T | DYZ19 | *** | ||||||
22430446-G-C | 20268560-G-C | DYZ19 | *** | *** | |||||
24908836-C-A | 22762689-C-A | g1 | 8×T | *** | |||||
25000484-T-C | 22854337-T-C | g1 | *** | ||||||
25207054-G-A | 23060907-G-A | g1 | *** | ||||||
26272206-AAAAAG-A | 24126059-AAAAAG-A | P1_Y1 | 4×AAAAG | *** | |||||
26944985-T-G | 24798838-T-G | P1_r3 | *** | ||||||
27009328-C-T | 24863181-C-T | P1_r4 | *** | ||||||
28809477-G-C | 26663330-G-C | *** | |||||||
2948624-G-GTA | 3080583-G-GTA | *** | |||||||
23961933-G-GTA | 21815786-G-GTA | *** | |||||||
17448696-C-A | 15336816-C-A | *** | |||||||
14504492-C-A | 12392697-C-A | *** | |||||||
5409810-G-T | 5541769-G-T | *** | |||||||
13483338-G-C | 11327662-G-C | *** | |||||||
8331697-CT-C | 8463656-CT-C | 10×T | *** | ||||||
15326554-AT-A | 13214672-AT-A | 8×T | *** | ||||||
17052015-C-A | 14940135-C-A | *** | |||||||
28496837-C-A | 26350690-C-A | *** | |||||||
9539269-G-T | 9701660-G-T | IR3_Prx | *** | ||||||
13456285-A-T | 11300609-A-T | *** | |||||||
19216565-C-A | 17104685-C-A | *** | |||||||
17203562-A-C | 15091682-A-C | *** | |||||||
14547295-C-A | 12435496-C-A | *** | |||||||
8558530-CT-C,CTT | 8690489-CT-C,CTT | 13×T | *** | ||||||
4107862-G-A | 4239821-G-A | *** | |||||||
14376327-C-A | 12255623-C-A | *** | |||||||
13450174-C-A | 11294498-C-A | *** | |||||||
14423420-C-A | 12302695-C-A | *** | |||||||
15453242-C-A | 13341362-C-A | *** | |||||||
14295809-C-A | 12175103-C-A | *** | |||||||
21490889-C-A | 19329003-C-A | *** | |||||||
2711945-C-A | 2843904-C-A | *** | |||||||
2745615-C-A | 2877574-C-A | *** | |||||||
2762705-CTT-C,CTTT | 2894664-CTT-C,CTTT | 16×T | *** | ||||||
2804132-C-A | 2936091-C-A | *** | |||||||
2847917-T-C | 2979876-T-C | *** | |||||||
5189130-TGCTGATAA-T | 5321089-TGCTGATAA-T | *** | |||||||
5409764-CTTTCTT-C | 5541723-CTTTCTT-C | *** | |||||||
5409772-CTT-C | 5541731-CTT-C | *** | |||||||
6707363-A-G | 6839322-A-G | *** | |||||||
6715786-C-G | 6847745-C-G | *** | |||||||
7134345-C-A | 7266304-C-A | *** | |||||||
7193571-C-A | 7325530-C-A | *** | |||||||
7244132-C-A | 7376091-C-A | *** | |||||||
7289270-C-A | 7421229-C-A | *** | |||||||
7429646-C-A | 7561605-C-A | *** | |||||||
7713983-C-A | 7845942-C-A | *** | |||||||
8209402-C-A | 8341361-C-A | *** | |||||||
8227207-AG-A | 8359166-AG-A | *** | |||||||
8274140-T-G | 8406099-T-G | *** | |||||||
8382443-C-A | 8514402-C-A | *** | |||||||
8798988-C-A | 8930947-C-A | *** | |||||||
8840972-G-T | 8972931-G-T | *** | |||||||
8841540-C-A | 8973499-C-A | *** | |||||||
8848884-TCCCCAA-T | 8980843-TCCCCAA-T | *** | |||||||
8881071-A-AG | 9013030-A-AG | *** | |||||||
9050653-C-A | 9213044-C-A | *** | |||||||
9130386-A-T | 9292777-A-T | *** | |||||||
9848750-G-T | 10011141-G-T | *** | |||||||
9983656-C-A | 10146047-C-A | *** | |||||||
10018486-C-T | 10180877-C-T | *** | |||||||
10038062-T-C | 10200453-T-C | *** | |||||||
10958353-C-A,T | *** | ||||||||
13446991-C-A | 11291315-C-A | *** | |||||||
13468751-G-A | 11313075-G-A | *** | |||||||
13634324-T-A | 11478648-T-A | *** | |||||||
13690200-G-T | 11534524-G-T | DYZ17 | *** | ||||||
13712390-A-G | 11556714-A-G | DYZ17 | *** | ||||||
11643767-T-C,TTAACAC | DYZ17 | *** | |||||||
11643768-G-C,GAATA | DYZ17 | *** | |||||||
13842756-T-TCATCC | 11722050-T-TCATCC | DYZ17 | *** | ||||||
13867925-G-A | 11747219-G-A | DYZ17 | *** | ||||||
13934685-C-A | 11813979-C-A | *** | |||||||
14043726-C-A | 11923020-C-A | *** | |||||||
14272686-CTTT-C,CTTTT | 12151980-CTTT-C,CTTTT | 15×T | *** | ||||||
14325151-T-C | 12204445-T-C | *** | |||||||
14425893-A-T | 12305168-A-T | *** | |||||||
14652371-G-A | 12540436-G-A | *** | |||||||
15019818-G-A | 12907907-G-A | *** | |||||||
15171979-C-A | 13060065-C-A | *** | |||||||
15279646-C-A | 13167745-C-A | *** | |||||||
16146535-T-C | 14034655-T-C | P8_Dst | *** | ||||||
16197444-G-T | 14085564-G-T | *** | |||||||
16456226-C-A | 14344346-C-A | *** | |||||||
16688732-C-A | 14576852-C-A | *** | |||||||
16861206-A-G | 14749326-A-G | *** | |||||||
16929004-C-A | 14817124-C-A | *** | |||||||
17020729-C-A | 14908849-C-A | *** | |||||||
17321230-AC-A | 15209350-AC-A | *** | |||||||
17667283-T-C | 15555403-T-C | *** | |||||||
18609364-C-A | 16497484-C-A | *** | |||||||
18625638-G-T | 16513758-G-T | *** | |||||||
18867223-A-G | 16755343-A-G | *** | |||||||
18883893-C-A | 16772013-C-A | *** | |||||||
19067738-C-A | 16955858-C-A | *** | |||||||
19108646-C-A | 16996766-C-A | *** | |||||||
19247999-C-A | 17136119-C-A | *** | |||||||
19517083-C-A | 17405203-C-A | *** | |||||||
19531701-C-T | 17419821-C-T | *** | |||||||
21132259-C-A | 18970373-C-A | *** | |||||||
21203063-A-G | 19041177-A-G | *** | |||||||
21317169-C-A | 19155283-C-A | *** | |||||||
21490373-ATTT-A | 19328487-ATTT-A | 15×T | *** | ||||||
21691709-C-A | 19529823-C-A | *** | |||||||
21809876-G-T | 19647990-G-T | *** | |||||||
21909741-G-C | 19747855-G-C | *** | |||||||
23010099-T-G | 20848213-T-G | *** | |||||||
23061367-C-A | 20899481-C-A | *** | |||||||
23079312-A-G | 20917426-A-G | *** | |||||||
23122154-C-A | 20960268-C-A | *** | |||||||
23236750-C-A | 21074864-C-A | *** | |||||||
23327068-G-C | 21165182-G-C | *** | |||||||
23359079-C-A | 21197193-C-A | *** | |||||||
23745218-G-T | 21583332-G-T | *** | |||||||
23756676-C-A | 21594790-C-A | *** | |||||||
23779168-C-A | 21617282-C-A | *** | |||||||
23974236-C-A | 21828089-C-A | *** | |||||||
24006737-C-A | 21860590-C-A | *** | |||||||
28531859-C-A | 26385712-C-A | *** | |||||||
17141-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.