Dexter

FTDNA: 164044, BigY2: 164044

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z2959 > Z46375 > BY35297 > FGC4087 > BY35284

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
164044		BigY2
164044
27809829-T-C 25663682-T-C P1_Y2 A+
27809830-T-A 25663683-T-A P1_Y2 A+
27809848-G-A 25663701-G-A P1_Y2 A+
27809853-G-A 25663706-G-A P1_Y2 A+
27809854-C-T 25663707-C-T P1_Y2 A+
27809856-C-T 25663709-C-T P1_Y2 A+
27809872-C-A 25663725-C-A P1_Y2 A+
27809875-T-A 25663728-T-A P1_Y2 A+
27809886-T-A 25663739-T-A P1_Y2 A+
19860891-C-A 17749011-C-A P5_Prx A*
6241580-G-C 6373539-G-C IR3_Dst ***A*
18289634-G-C 16177754-G-C P6_Prx ***A*
19898854-T-C 17786974-T-C P5_Prx ***A*
23182062-C-A 21020176-C-A Y***A*
20434303-C-A 18272417-C-A P5_Dst A*
20661111-G-GT 18499225-G-GT P4_Prx 9×TA*
13695100-T-G 11539424-T-G A*
20041932-A-C 17930052-A-C P5_Prx A*
20231595-G-GAAA 18069709-G-GAAA P5_Dst A*
13478996-C-T 11323320-C-T A*
20050729-G-GT 17938849-G-GT P5_Prx 8×TA*
25931592-G-GAAGAAAGA 23785445-G-GAAGAAAGA P1_Y1 14×AAGA+
6653239-G-T 6785198-G-T Y45157 YY++
7270607-C-A 7402566-C-A Y45849 YY++
8355187-GA-G 8487146-GA-G ++
8852355-C-T 8984314-C-T Y47992 YY++
9000392-C-A 9162783-C-A BY77186 Y++
9862029-G-A 10024420-G-A Y48578 YY++
10036953-G-A 10199344-G-A BY83284 ***+
15029429-C-T 12917517-C-T Y50188 YY++
15516993-A-G 13405113-A-G Y50775 YY++
18667929-T-TC 16556049-T-TC 9×C+***
22480458-G-T 20318572-G-T FT460378 DYZ19 ++
22616932-A-C 20455046-A-C Y58059 YY++
23568633-G-A 21406747-G-A Y59357 YY++
10253-G-A +
22255770-T-A 20093884-T-A DYZ19 ****
23311183-C-A 21149297-C-A YY****
23311179-C-CTTTA 21149293-C-CTTTA *
59033046-C-T 56886899-C-T **
13821292-C-T 11700586-C-T FT159995 **
13740617-G-T 11584941-G-T **
59033099-T-A 56886952-T-A **
59033101-C-T 56886954-C-T **
5829640-T-G 5961599-T-G **
15612266-G-C 13500386-G-C CTS4362 **
20045188-A-G 17933308-A-G P5_Prx **
20084534-G-A 17972654-G-A P5_Dst **
20084535-C-T 17972655-C-T P5_Dst **
20084540-T-G 17972660-T-G P5_Dst **
20084544-G-C 17972664-G-C P5_Dst **
20084551-T-C 17972671-T-C P5_Dst **
20084552-C-G 17972672-C-G P5_Dst **
22508793-A-T 20346907-A-T BY46402 DYZ19 *****
27248816-C-T 25102669-C-T P1_g3 **
59033032-G-A 56886885-G-A **
59033108-T-C 56886961-T-C **
59033112-T-C 56886965-T-C **
58990237-C-A 56844090-C-A **
58990262-A-G 56844115-A-G **
58990214-C-T 56844067-C-T **
10808620-C-T **
20500942-GAAA-G 18339056-GAAA-G P5_Dst 15×A**
30969-C-A **
18263437-C-A 16151557-C-A **
13570873-C-A 11415197-C-A **
5170388-C-A 5302347-C-A **
10982753-A-T **
13468244-GC-G 11312568-GC-G **
3334656-G-T 3466615-G-T **
30943-T-C **
30938-A-T **
10793286-C-A **
10817428-C-A **
15158969-A-G 13047055-A-G **
14181511-G-T 12060805-G-T **
11658377-T-G **
3815145-G-T 3947104-G-T **
13809673-A-G 11688967-A-G **
10870642-CT-C **
10870648-A-T **
10870656-C-G **
10870658-T-A **
10663727-C-A **
16905802-T-A 14793922-T-A **
10982772-T-A **
10957905-C-A **
10683539-C-A **
13196316-C-A 11040640-C-A **
10982787-G-A **
10982756-G-A **
10982788-T-C **
10982802-C-T FT354269 **
8852253-C-A 8984212-C-A **
10941508-G-A FT437509 **
7163019-G-T 7294978-G-T **
17244199-G-T 15132319-G-T **
9384547-C-A 9546938-C-A **
10982767-A-G **
10982800-C-G **
10982821-AACTGCACTCC-A **
16084119-C-T 13972239-C-T **
11651821-G-T **
3636110-C-T 3768069-C-T **
3509454-C-A 3641413-C-A **
3636183-G-T 3768142-G-T **
3774370-G-A 3906329-G-A **
3877669-G-T 4009628-G-T **
4216159-C-A 4348118-C-A **
4358286-G-A 4490245-G-A **
4530300-C-A 4662259-C-A **
5010521-C-A 5142480-C-A **
5140617-C-A 5272576-C-A **
5140618-T-C 5272577-T-C **
5924951-G-T 6056910-G-T **
6480868-C-A 6612827-C-A **
6600909-C-A 6732868-C-A **
6667500-C-A 6799459-C-A **
6901162-A-G 7033121-A-G **
7014673-T-A 7146632-T-A **
7297324-C-A 7429283-C-A **
7452530-G-T 7584489-G-T IR1_L **
7617666-A-G 7749625-A-G **
7864063-C-A 7996022-C-A **
8235496-T-C 8367455-T-C **
8238311-C-G 8370270-C-G **
8238446-C-A 8370405-C-A **
8474986-T-C 8606945-T-C **
8774685-C-T 8906644-C-T **
9354448-C-A 9516839-C-A **
9873706-C-A 10036097-C-A **
10782076-T-C **
10802236-CT-C **
10802242-A-T **
10849000-T-C **
11028228-T-A **
13226386-G-T 11070710-G-T **
11650629-A-G **
11654163-G-A FT450423 **
13859937-A-G 11739231-A-G FT128561 **
13994192-G-T 11873486-G-T **
14070149-C-T 11949443-C-T **
14113703-G-T 11992997-G-T **
12375498-C-T **
14635266-C-A 12523335-C-A **
14969195-C-T 12857270-C-T **
15597729-G-T 13485849-G-T **
15597733-T-C 13485853-T-C **
15816382-A-T 13704502-A-T FTB66660 **
16908435-A-C 14796555-A-C **
17192980-C-A 15081100-C-A **
17503766-C-T 15391886-C-T **
17673752-C-A 15561872-C-A **
18262016-A-G 16150136-A-G **
19407568-A-G 17295688-A-G **
19415915-C-A 17304035-C-A **
20626066-A-T 18464180-A-T P4_Prx **
22075781-C-T 19913895-C-T **
22173259-G-T 20011373-G-T **
26067933-A-C 23921786-A-C P1_Y1 **
27231716-G-T 25085569-G-T P1_g3 **
28626123-C-A 26479976-C-A **
28800624-T-A 26654477-T-A **
56844053-GGGACA-T **
56844061-T-A **
56844064-C-G **
30986-C-G **
13138349-T-G 10627835-T-G ***
13452983-C-A 11297307-C-A ***
13143016-C-T 10632502-C-T ***
13662098-A-G 11506422-A-G ***
13139683-T-C 10629169-T-C ***
19966688-A-AAAG 17854808-A-AAAG P5_Prx 26×AAG***
24485675-C-CT,T 22339528-C-CT,T 15×T***
13452973-G-A,C 11297297-G-A,C ***
9030408-A-AG 9192799-A-AG 17×GAAAG***
26024548-CTT-C 23878401-CTT-C P1_Y1 17×T***
13657030-T-A 11501354-T-A ***
13715679-G-A 11560003-G-A ***
13841204-TGGAATGCAAG-T 11720498-TGGAATGCAAG-T ***
13686887-G-C 11531211-G-C ***
13857408-T-A 11736702-T-A ***
22336309-A-T 20174423-A-T DYZ19 ***
20045238-A-G 17933358-A-G P5_Prx ***
13451144-A-T 11295468-A-T ***
13705870-T-A 11550194-T-A ***
13843665-T-G 11722959-T-G ***
17446800-TC-T 15334920-TC-T ***
26199611-A-ATG 24053464-A-ATG P1_Y1 17×TG***
13653058-T-G 11497382-T-G BY56084BY87137 4×AATGG***
13823141-A-T 11702435-A-T BY90606 ***
13827206-T-A 11706500-T-A ***
26189760-G-GT 24043613-G-GT P1_Y1 21×T***
13452858-C-G 11297182-C-G ***
13838542-G-C 11717836-G-C ***
13651334-G-A 11495658-G-A ***
18892200-A-G 16780320-A-G ***
18892204-T-A 16780324-T-A ***
18892205-A-T 16780325-A-T ***
18892210-T-A 16780330-T-A ***
18892211-A-T 16780331-A-T PF945 ***
18892216-A-T 16780336-A-T ***
18892315-T-G 16780435-T-G ***
18892316-T-A 16780436-T-A ***
19948175-C-T 17836295-C-T P5_Prx ***
25251544-C-A 23105397-C-A P2_r1 26×A***
13676728-A-G 11521052-A-G ***
13821264-G-A 11700558-G-A ***
13841236-G-A 11720530-G-A ***
13865954-T-C,G 11745248-T-C,G ***
13478863-G-C 11323187-G-C ***
13139304-CAGTTG-C 10628790-CAGTTG-C ***
13139538-T-C 10629024-T-C ***
13140327-T-C 10629813-T-C ***
13141177-G-C,T 10630663-G-C,T ***
13142878-G-C 10632364-G-C FT428073 4×CATTC***
13142934-C-T 10632420-C-T ***
13447206-C-T 11291530-C-T ***
13453529-C-A 11297853-C-A ***
13455855-ATTCCACTGGG-A 11300179-ATTCCACTGGG-A ***
13455868-T-C 11300192-T-C ***
13458544-G-T 11302868-G-T ***
13458980-G-C 11303304-G-C ***
13459491-A-G 11303815-A-G ***
13651907-T-C 11496231-T-C ***
13656990-T-G 11501314-T-G ***
13657029-C-A 11501353-C-A ***
13657035-C-T 11501359-C-T ***
13657036-A-AAATGG 11501360-A-AAATGG ***
13664783-T-G 11509107-T-G ***
13701713-G-A 11546037-G-A ***
13705856-T-G 11550180-T-G ***
13705857-T-A 11550181-T-A ***
13705858-G-C 11550182-G-C FT135168 ***
13705861-G-T 11550185-G-T ***
13808724-G-GGAATGGAATGATACGGAATA 11688018-G-GGAATGGAATGATACGGAATA ***
13808738-T-C 11688032-T-C ***
13817997-T-G 11697291-T-G ***
13818725-G-T 11698019-G-T ***
13823162-GGCATC-G 11702456-GGCATC-G ***
13829414-C-G 11708708-C-G ***
13839325-G-T 11718619-G-T ***
13847213-G-A 11726507-G-A ***
13849170-TGGAGC-T 11728464-TGGAGC-T ***
13860015-G-C 11739309-G-C ***
13860017-C-G 11739311-C-G ***
13860020-G-GACACA 11739314-G-GACACA ***
19864109-TA-T 17752229-TA-T P5_Prx 10×A***
20045193-A-G 17933313-A-G P5_Prx ***
20045195-C-G 17933315-C-G P5_Prx ***
20045199-A-C 17933319-A-C P5_Prx ***
20045204-G-A 17933324-G-A P5_Prx ***
20045216-A-C 17933336-A-C P5_Prx ***
20045220-A-G 17933340-A-G P5_Prx ***
20045228-A-G 17933348-A-G P5_Prx ***
20045233-A-G 17933353-A-G P5_Prx ***
20084410-T-C 17972530-T-C P5_Dst ***
20084412-C-T 17972532-C-T P5_Dst ***
20084420-C-T 17972540-C-T P5_Dst ***
20084422-T-C 17972542-T-C P5_Dst ***
20084451-TC-T 17972571-TC-T P5_Dst ***
20084453-T-C 17972573-T-C P5_Dst ***
20084456-C-T 17972576-C-T P5_Dst 7×TTTCT***
20084461-T-C 17972581-T-C P5_Dst ***
20084469-T-C 17972589-T-C P5_Dst ***
20084474-T-C 17972594-T-C P5_Dst ***
20084479-T-C 17972599-T-C P5_Dst ***
20084484-T-C 17972604-T-C P5_Dst ***
20084489-T-C 17972609-T-C P5_Dst ***
20084504-T-C 17972624-T-C P5_Dst ***
20084509-T-C 17972629-T-C P5_Dst ***
20084514-T-C 17972634-T-C P5_Dst ***
20084519-T-C 17972639-T-C P5_Dst ***
22270402-G-T 20108516-G-T DYZ19 ***
22336313-C-T 20174427-C-T DYZ19 ***
22364354-T-C 20202468-T-C DYZ19 ***
22443301-A-G 20281415-A-G DYZ19 ***
24694756-CT-C 22548609-CT-C P3_b2 9×T***
25050579-T-C 22904432-T-C g1 ***
25079824-G-A 22933677-G-A g1 ***
25808030-C-T 23661883-C-T P1_b3 ***
25998834-AAGAGAG-A 23852687-AAGAGAG-A P1_Y1 8×AG***
27082331-GGAA-G 24936184-GGAA-G P1_r4 ***
27791863-T-G 25645716-T-G P1_Y2 ***
27791881-T-G 25645734-T-G P1_Y2 ***
27792004-T-G 25645857-T-G P1_Y2 ***
28784403-ATGTAG-A,ATGGAG 26638256-ATGTAG-A,ATGGAG ***
28785684-ATTTAT-A 26639537-ATTTAT-A ***
28786635-AGTGGC-A 26640488-AGTGGC-A ***
28800104-G-A 26653957-G-A ***
58855286-C-T 56735585-G-A 9×CCATT***
13140153-C-CTCCAT,T 10629639-C-CTCCAT,T 12×TCCAT***
13452853-T-TCATTCCATTC 11297177-T-TCATTCCATTC ***
23435201-TC-T 21273315-TC-T ***
7333268-T-A 7465227-T-A FGC14077FGC14077 ***
58981831-A-ATTCTT 56835684-A-ATTCTT ***
3853806-TTATA-T 3985765-TTATA-T 8×TA***
15399505-CAA-C,CAC 13287625-CAA-C,CAC ***
17327172-C-A 15215292-C-A BY113855 ***
13489495-C-T 11333819-C-T ***
21650962-C-A 19489076-C-A ***
8421541-C-A 8553500-C-A ***
9098064-C-A 9260455-C-A ***
6780852-C-A 6912811-C-A ***
56835680-A-AATGAT ***
5426381-TC-C,TT 5558340-TC-C,TT ***
8806340-C-A 8938299-C-A ***
18723887-CTTTTTTTT-C 16612007-CTTTTTTTT-C 19×T***
3650928-G-T 3782887-G-T ***
22809956-C-A 20648070-C-A ***
10673941-TGCACC-T,TGCACA ***
16813808-C-A 14701928-C-A ***
19068998-C-A 16957118-C-A ***
9074100-C-A 9236491-C-A ***
18962410-C-A 16850530-C-A ***
10678158-A-T ***
10825227-T-C ***
13482995-T-C 11327319-T-C ***
2906022-AT-A 3037981-AT-A 8×T***
4563257-C-T 4695216-C-T ***
5755755-G-T 5887714-G-T ***
6912808-T-C 7044767-T-C ***
7092623-C-A 7224582-C-A ***
7786824-C-A 7918783-C-A ***
7969315-G-T 8101274-G-T ***
8261237-C-A 8393196-C-A ***
8280051-G-T 8412010-G-T ***
9874260-C-A 10036651-C-A ***
9926957-C-A 10089348-C-A ***
10750878-C-A ***
13194286-TTTCCATTCCATTCCATTCCA-T 11038610-TTTCCATTCCATTCCATTCCA-T 9×TTCCA***
13228480-T-C 11072804-T-C ***
13248820-C-A 11093144-C-A ***
13457993-T-C 11302317-T-C ***
13488906-G-A,C 11333230-G-A,C ***
13488918-C-A,T 11333242-C-A,T ***
13809654-GTGTAC-G 11688948-GTGTAC-G ***
13814001-C-T 11693295-C-T ***
13838342-G-A 11717636-G-A ***
14194898-G-A 12074192-G-A ***
14472045-T-A 12351314-T-A ***
14604590-CTTTTTTT-C,CTTTTT 12492792-CTTTTTTT-C,CTTTTT 21×T***
14988760-A-G 12876826-A-G ***
14995703-C-A 12883788-C-A ***
15107037-G-A 12995124-G-A ***
15744352-C-A 13632472-C-A ***
16000929-T-C 13889049-T-C ***
16269527-C-A 14157647-C-A ***
16516504-C-A 14404624-C-A ***
16654948-C-A 14543068-C-A ***
16704234-G-A 14592354-G-A ***
16818971-GTATATATATATATATATA-G,GTATATATATATA 14707091-GTATATATATATATATATA-G,GTATATATATATA 21×TA***
17465270-C-A 15353390-C-A ***
17610315-C-A 15498435-C-A ***
17661397-C-A 15549517-C-A ***
18186119-A-G 16074239-A-G ***
19297285-A-T 17185405-A-T ***
19368526-T-C 17256646-T-C ***
19505349-G-T 17393469-G-T ***
20829642-C-A 18667756-C-A P4_Gap ***
21249093-G-T 19087207-G-T ***
22812756-C-T 20650870-C-T ***
22906233-C-A 20744347-C-A ***
23359010-C-A 21197124-C-A ***
23415327-T-C 21253441-T-C ***
23415331-T-C 21253445-T-C ***
23415335-T-C 21253449-T-C ***
23472289-G-T 21310403-G-T ***
24013847-CTATATATATATATATATATATATATATATA-C,CTATATATATATATATATATATATATATA 21867700-CTATATATATATATATATATATATATATATA-C,CTATATATATATATATATATATATATATA 21×TA***
24513810-G-A 22367663-G-A ***
24871233-C-A 22725086-C-A IR1_R ***
28775858-C-A 26629711-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.