Cox
FTDNA: 223805, BigY2: 223805MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 223805 | BigY2 223805 |
---|---|---|---|---|---|---|---|---|---|
26228013-T-C | 24081866-T-C | P1_Y1 | *** | A* | |||||
16123544-G-A | 14011664-G-A | P8_Prx | *** | A* | |||||
26340672-G-A | 24194525-G-A | P1_Y1 | *** | A* | |||||
6210157-A-T | 6342116-A-T | IR3_Dst | *** | A* | |||||
24461307-G-C | 22315160-G-C | BY150123 | Y | + | + | ||||
19121280-C-A | 17009400-C-A | BY126478 | Y | Y | + | + | |||
14498103-G-A | 12386308-G-A | BY96178 | Y | Y | + | + | |||
15426816-T-C | 13314936-T-C | BY101507 | Y | Y | + | + | |||
15490365-A-G | 13378485-A-G | BY101941 | Y | Y | + | + | |||
16909717-A-G | 14797837-A-G | BY111028 | Y | Y | + | + | |||
17476369-C-T | 15364489-C-T | BY115078 | Y | Y | + | + | |||
17911221-G-C | 15799341-G-C | BY118365 | Y | Y | + | + | |||
17934705-C-A | 15822825-C-A | BY118531 | Y | Y | + | + | |||
18741441-T-C | 16629561-T-C | BY123557 | Y | Y | + | + | |||
21638281-C-T | 19476395-C-T | BY134348 | Y | Y | + | + | |||
19493988-G-T | 17382108-G-T | BY129534 | Y | Y | + | + | |||
14028827-T-C | 11908121-T-C | BY92444 | Y | Y | + | + | |||
28797414-G-C | 26651267-G-C | BY151576 | *** | + | |||||
28779224-G-A | 26633077-G-A | BY151168 | ** | + | |||||
22457670-A-T | 20295784-A-T | BY25612 | DYZ19 | + | + | ||||
22476078-T-A | 20314192-T-A | BY223511 | DYZ19 | + | + | ||||
22639021-C-G | 20477135-C-G | BY139692 | Y | + | + | ||||
22930952-C-A | 20769066-C-A | BY141828 | Y | Y | + | + | |||
22996366-G-A | 20834480-G-A | BY142217 | Y | Y | + | + | |||
23599460-G-C | 21437574-G-C | BY146617 | Y | Y | + | + | |||
24370889-T-G | 22224742-T-G | BY149411 | + | + | |||||
14459511-T-G | 12338784-T-G | BY95875 | Y | Y | + | + | |||
14894820-T-G | 12782886-T-G | BY98316 | Y | Y | + | + | |||
13835514-C-T | 11714808-C-T | BY90988 | + | + | |||||
9860991-G-T | 10023382-G-T | BY81536 | Y | Y | + | + | |||
22272992-C-G | 20111106-C-G | Z7878 | DYZ19 | + | + | ||||
5687801-G-A | 5819760-G-A | BY58793 | ** | + | |||||
8336588-T-A | 8468547-T-A | BY71782 | Y | Y | + | + | |||
22228528-G-A | 20066642-G-A | BY52098 | DYZ19 | + | |||||
13211074-A-G | 11055398-A-G | BY84458 | + | + | |||||
13716870-T-A | 11561194-T-A | BY89675 | + | + | |||||
13452653-C-G | 11296977-C-G | *** | * | ||||||
14466530-AATCTATCT-A | 12345803-AATCTATCT-A | 9×ATCT | *** | * | |||||
22233375-C-A | 20071489-C-A | Y57811 | DYZ19 | *** | * | ||||
16809086-C-CAGATAGATAGAT | 14697206-C-CAGATAGATAGAT | 11×AGAT | *** | * | |||||
22302528-T-A | 20140642-T-A | DYZ19 | *** | * | |||||
4898094-A-G | 5030053-A-G | ** | |||||||
5420605-T-A | 5552564-T-A | ** | |||||||
4862587-G-A | 4994546-G-A | ** | |||||||
6149840-T-C | 6281799-T-C | IR3_Dst | ** | ||||||
5860148-G-T | 5992107-G-T | ** | |||||||
5999613-G-A | 6131572-G-A | ** | |||||||
7107415-G-T | 7239374-G-T | ** | |||||||
7099239-C-A | 7231198-C-A | ** | |||||||
5609546-T-C | 5741505-T-C | ** | |||||||
6355675-G-T | 6487634-G-T | ** | |||||||
6213921-G-A | 6345880-G-A | IR3_Dst | ** | ||||||
6310858-C-CAA | 6442817-C-CAA | IR3_Dst | ** | ||||||
7061686-G-T | 7193645-G-T | ** | |||||||
7043685-G-T | 7175644-G-T | ** | |||||||
6674719-G-A | 6806678-G-A | ** | |||||||
21615993-G-A | 19454107-G-A | ** | |||||||
6741358-T-C | 6873317-T-C | ** | |||||||
6847987-G-C | 6979946-G-C | ** | |||||||
6919880-C-T | 7051839-C-T | ** | |||||||
7303859-T-C | 7435818-T-C | ** | |||||||
56872986-T-C | ** | ||||||||
7646418-A-C | 7778377-A-C | ** | |||||||
7338659-A-T | 7470618-A-T | ** | |||||||
8052012-A-G | 8183971-A-G | ** | |||||||
21389773-C-A | 19227887-C-A | ** | |||||||
9030086-G-T | 9192477-G-T | ** | |||||||
8840582-C-A | 8972541-C-A | ** | |||||||
8751586-T-C | 8883545-T-C | ** | |||||||
8689389-C-A | 8821348-C-A | ** | |||||||
8677941-A-T | 8809900-A-T | ** | |||||||
8674158-A-G | 8806117-A-G | FT206938 | ** | ||||||
8666720-C-T | 8798679-C-T | ** | |||||||
21438380-A-G | 19276494-A-G | ** | |||||||
8635424-A-G | 8767383-A-G | ** | |||||||
8342842-T-C | 8474801-T-C | 10×A | ** | ||||||
8051984-G-T | 8183943-G-T | ** | |||||||
7341527-T-C | 7473486-T-C | ** | |||||||
7990704-A-T | 8122663-A-T | ** | |||||||
7897515-T-G | 8029474-T-G | ** | |||||||
7780725-C-T | 7912684-C-T | ** | |||||||
7656781-C-A | 7788740-C-A | ** | |||||||
4700709-A-T | 4832668-A-T | ** | |||||||
7646410-C-T | 7778369-C-T | ** | |||||||
7437056-G-T | 7569015-G-T | ** | |||||||
21446361-C-A | 19284475-C-A | ** | |||||||
7396387-G-A | 7528346-G-A | ** | |||||||
7380881-C-A | 7512840-C-A | ** | |||||||
7341581-T-G | 7473540-T-G | ** | |||||||
4764922-G-A | 4896881-G-A | ** | |||||||
2773458-G-A | 2905417-G-A | ** | |||||||
4567199-C-T | 4699158-C-T | ** | |||||||
21658510-C-A | 19496624-C-A | ** | |||||||
21934633-C-A | 19772747-C-A | ** | |||||||
18987140-C-A | 16875260-C-A | ** | |||||||
7204747-C-A | 7336706-C-A | ** | |||||||
17869632-C-A | 15757752-C-A | ** | |||||||
22200995-C-G | 20039109-C-G | ** | |||||||
11643172-C-A | ** | ||||||||
11020998-T-C | ** | ||||||||
14475861-C-A | 12355130-C-A | ** | |||||||
14324313-C-A | 12203607-C-A | ** | |||||||
28818896-T-C | 26672749-T-C | ** | |||||||
11032913-C-A | ** | ||||||||
4552817-C-T | 4684776-C-T | ** | |||||||
21752236-G-T | ** | ||||||||
11649437-G-T | ** | ||||||||
18996432-C-A | 16884552-C-A | ** | |||||||
16528154-C-A | 14416274-C-A | ** | |||||||
15873520-C-A | 13761640-C-A | ** | |||||||
22241626-A-G | 20079740-A-G | DYZ19 | ** | ||||||
22132345-C-A | 19970459-C-A | ** | |||||||
22774820-T-C | 20612934-T-C | ** | |||||||
13855537-AATG-A | 11734831-AATG-A | ** | |||||||
10896283-C-A | ** | ||||||||
23364331-C-A | 21202445-C-A | ** | |||||||
4540498-T-A | 4672457-T-A | ** | |||||||
21862228-C-A | 19700342-C-A | ** | |||||||
4540320-A-G | 4672279-A-G | ** | |||||||
4470420-T-C | 4602379-T-C | ** | |||||||
4438429-T-A | 4570388-T-A | ** | |||||||
4217064-C-A | 4349023-C-A | ** | |||||||
3877725-G-T | 4009684-G-T | ** | |||||||
3716844-T-C | 3848803-T-C | ** | |||||||
3603192-C-A | 3735151-C-A | ** | |||||||
3511076-G-T | 3643035-G-T | ** | |||||||
3374197-G-T | 3506156-G-T | ** | |||||||
3274809-G-T | 3406768-G-T | ** | |||||||
7648995-C-A | 7780954-C-A | ** | |||||||
2832764-G-A | 2964723-G-A | ** | |||||||
2824418-T-C | 2956377-T-C | ** | |||||||
2810366-A-ATTT | 2942325-A-ATTT | 23×T | ** | ||||||
2799501-C-A | 2931460-C-A | ** | |||||||
9941126-G-A | 10103517-G-A | ** | |||||||
21993994-T-C | 19832108-T-C | ** | |||||||
2697388-C-A | 2829347-C-A | ** | |||||||
8167874-C-A | 8299833-C-A | ** | |||||||
22084784-C-G | 19922898-C-G | ** | |||||||
10036017-C-A | 10198408-C-A | ** | |||||||
9465295-C-G | 9627686-C-G | ** | |||||||
20696412-A-T | 18534526-A-T | P4_Prx | ** | ||||||
9973547-T-A | 10135938-T-A | ** | |||||||
15842645-G-A | 13730765-G-A | FT352794 | ** | ||||||
16037476-C-A | 13925596-C-A | ** | |||||||
16020717-G-C | 13908837-G-C | ** | |||||||
16007330-C-A | 13895450-C-A | ** | |||||||
15942936-A-G | 13831056-A-G | ** | |||||||
15928579-C-A | 13816699-C-A | ** | |||||||
15928472-C-T | 13816592-C-T | FGC32481 | ** | ||||||
15863008-A-G | 13751128-A-G | ** | |||||||
15842655-T-C | 13730775-T-C | ** | |||||||
15842646-AG-A | 13730766-AG-A | ** | |||||||
15842639-G-GC | 13730759-G-GC | ** | |||||||
16316767-C-A | 14204887-C-A | ** | |||||||
15842633-A-G | 13730753-A-G | ** | |||||||
15834199-G-T | 13722319-G-T | ** | |||||||
15801637-C-A | 13689757-C-A | ** | |||||||
15622385-C-A | 13510505-C-A | ** | |||||||
19874223-T-C | 17762343-T-C | P5_Prx | ** | ||||||
15612225-T-A | 13500345-T-A | ** | |||||||
15403642-C-A | 13291762-C-A | ** | |||||||
15382810-A-G | 13270930-A-G | ** | |||||||
14961150-A-C | 12849225-A-C | ** | |||||||
14764851-T-C | 12652920-T-C | ** | |||||||
19622143-C-T | 17510263-C-T | P5_Prx | ** | ||||||
16354566-C-A | 14242686-C-A | ** | |||||||
14593464-TTTTC-T | 12481664-TTTTC-T | ** | |||||||
18150641-G-T | 16038761-G-T | FT10209 | ** | ||||||
19444209-C-A | 17332329-C-A | ** | |||||||
18985964-G-A | 16874084-G-A | ** | |||||||
18951896-T-A | 16840016-T-A | ** | |||||||
18864870-C-T | 16752990-C-T | ** | |||||||
19529398-C-A | 17417518-C-A | ** | |||||||
18619045-A-C | 16507165-A-C | ** | |||||||
18614384-A-G | 16502504-A-G | ** | |||||||
18565284-AT-A | 16453404-AT-A | ** | |||||||
18401582-C-A | 16289702-C-A | P6_Gap | ** | ||||||
18098989-C-A | 15987109-C-A | ** | |||||||
16673040-C-A | 14561160-C-A | ** | |||||||
19575796-C-A | 17463916-C-A | P5_Prx | ** | ||||||
17940045-C-T | 15828165-C-T | ** | |||||||
17580210-T-A | 15468330-T-A | ** | |||||||
17502563-G-T | 15390683-G-T | ** | |||||||
17445443-C-A | 15333563-C-A | ** | |||||||
17297420-A-G | 15185540-A-G | ** | |||||||
17098997-A-T | 14987117-A-T | ** | |||||||
17006681-C-A | 14894801-C-A | ** | |||||||
16931850-G-T | 14819970-G-T | ** | |||||||
16743004-T-C | 14631124-T-C | ** | |||||||
14612851-G-T | 12501049-G-T | ** | |||||||
14546778-A-G | 12434979-A-G | ** | |||||||
21219615-C-A | 19057729-C-A | ** | |||||||
10872655-C-A | ** | ||||||||
13464055-C-A | 11308379-C-A | ** | |||||||
13293630-C-A | 11137954-C-A | ** | |||||||
22802288-C-A | 20640402-C-A | ** | |||||||
11033230-T-A | ** | ||||||||
11021043-T-A | ** | ||||||||
11021039-C-A | ** | ||||||||
11021016-A-C | ** | ||||||||
10999894-C-CTTTTG | ** | ||||||||
10952486-A-C | ** | ||||||||
10837555-C-A | ** | ||||||||
13723087-T-A | 11567411-T-A | ** | |||||||
10826903-C-A | ** | ||||||||
10800011-C-A | ** | ||||||||
10794286-T-TACTTTTCCAC | ** | ||||||||
21141570-C-A | 18979684-C-A | ** | |||||||
10785216-T-C | ** | ||||||||
10775383-C-A | ** | ||||||||
10765370-C-A | ** | ||||||||
21166871-C-A | 19004985-C-A | ** | |||||||
21167382-A-G | 19005496-A-G | ** | |||||||
10057907-C-A | 10220298-C-A | ** | |||||||
13483751-C-A | 11328075-C-A | ** | |||||||
11648714-C-A | ** | ||||||||
14517731-T-C | 12405932-T-C | ** | |||||||
14031879-C-A | 11911173-C-A | ** | |||||||
19887069-A-G | 17775189-A-G | P5_Prx | ** | ||||||
14373486-C-A | 12252782-C-A | ** | |||||||
19992594-G-T | 17880714-G-T | P5_Prx | ** | ||||||
14184585-A-G | 12063879-A-G | ** | |||||||
14184397-G-A | 12063691-G-A | ** | |||||||
14177891-G-C | 12057185-G-C | ** | |||||||
14079505-C-A | 11958799-C-A | ** | |||||||
14076684-A-G | 11955978-A-G | FT175043 | ** | ||||||
14076682-A-G | 11955976-A-G | ** | |||||||
14065811-C-T | 11945105-C-T | ** | |||||||
13994237-C-A | 11873531-C-A | ** | |||||||
11652211-G-T | ** | ||||||||
20137241-G-T | 18025361-G-T | P5_Dst | ** | ||||||
13896366-C-A | 11775660-C-A | ** | |||||||
13858389-G-T | 11737683-G-T | ** | |||||||
13855541-GAA-G | 11734835-GAA-G | ** | |||||||
13855321-G-T | 11734615-G-T | ** | |||||||
13854679-A-G | 11733973-A-G | ** | |||||||
13838286-C-T | 11717580-C-T | ** | |||||||
13801175-A-T | 11680469-A-T | ** | |||||||
13801146-A-G | 11680440-A-G | ** | |||||||
11655432-G-T | ** | ||||||||
7623588-C-T | 7755547-C-T | FT179057 | ** | ||||||
14432014-C-A | 12311287-C-A | Y91417 | ** | ||||||
9978999-C-A | 10141390-C-A | ** | |||||||
22760740-C-A | 20598854-C-A | ** | |||||||
11019364-C-A | ** | ||||||||
24359586-AC-A | 22213439-AC-A | ** | |||||||
13461028-G-A | 11305352-G-A | ** | |||||||
16305739-A-C | 14193859-A-C | ** | |||||||
10887974-C-G | ** | ||||||||
28111783-G-A | 25965636-G-A | P1_Y2 | ** | ||||||
10689126-T-G | ** | ||||||||
10689093-A-T | ** | ||||||||
10689091-C-G | ** | ||||||||
16147492-G-A | 14035612-G-A | P8_Dst | ** | ||||||
11643732-TGG-CAC | ** | ||||||||
6776326-T-G | 6908285-T-G | ** | |||||||
6776325-G-T | 6908284-G-T | ** | |||||||
56833343-C-G | ** | ||||||||
13692764-A-T | 11537088-A-T | ** | |||||||
28460878-A-T | 26314731-A-T | ** | |||||||
7222048-ATT-A | 7354007-ATT-A | 14×T | ** | ||||||
28478376-C-A | 26332229-C-A | ** | |||||||
10887326-ACCATT-A | ** | ||||||||
7255351-C-A | 7387310-C-A | ** | |||||||
22241597-G-A | 20079711-G-A | DYZ19 | ** | ||||||
22517153-C-A | 20355267-C-A | ** | |||||||
14909660-C-A | 12797727-C-A | ** | |||||||
11021017-A-T | ** | ||||||||
26025623-T-TG | 23879476-T-TG | P1_Y1 | ** | ||||||
2708163-T-C | 2840122-T-C | ** | |||||||
2708160-A-G | 2840119-A-G | ** | |||||||
2708159-C-T | 2840118-C-T | ** | |||||||
25088294-A-T | 22942147-A-T | g1 | ** | ||||||
10890195-C-A | ** | ||||||||
18201561-C-CAA | 16089681-C-CAA | 14×A | ** | ||||||
25592777-G-A | 23446630-G-A | P1_gr1 | ** | ||||||
25995158-A-C | 23849011-A-C | P1_Y1 | ** | ||||||
11003745-C-CTAAACTCCATTCTGT | ** | ||||||||
7425176-C-A | 7557135-C-A | ** | |||||||
27562009-G-A | 25415862-G-A | P1_Y2 | ** | ||||||
8673814-C-A | 8805773-C-A | ** | |||||||
2906679-C-A | 3038638-C-A | ** | |||||||
26248885-A-C | 24102738-A-C | P1_Y1 | ** | ||||||
8649803-G-A | 8781762-G-A | ** | |||||||
20440393-T-TTGC | 18278507-T-TTGC | P5_Dst | ** | ||||||
15212338-C-CA | 13100424-C-CA | 9×A | ** | ||||||
10887981-C-T | ** | ||||||||
7329392-C-A | 7461351-C-A | ** | |||||||
21905354-GAAA-G | 19743468-GAAA-G | 16×A | ** | ||||||
6445275-C-A | 6577234-C-A | ** | |||||||
11021028-C-T | BY64053 | FT183010 | ** | ||||||
19324119-CA-C | 17212239-CA-C | 10×A | ** | ||||||
13488916-T-A | 11333240-T-A | ** | |||||||
15842638-C-T | 13730758-C-T | Z21920 | ** | ||||||
22365394-C-T | 20203508-C-T | DYZ19 | ** | ||||||
56839302-A-C | ** | ||||||||
56839610-CA-C | ** | ||||||||
56839634-G-A | ** | ||||||||
56839641-T-C | ** | ||||||||
56839646-G-GAGGTGA | ** | ||||||||
9316054-C-G | 9478445-C-G | ** | |||||||
56840325-G-T | ** | ||||||||
24458790-T-A | 22312643-T-A | ** | |||||||
14253783-A-C | 12133077-A-C | ** | |||||||
56827204-T-C | ** | ||||||||
13477424-C-A | 11321748-C-A | ** | |||||||
15394238-C-CA | 13282358-C-CA | 9×A | ** | ||||||
56849145-T-G | ** | ||||||||
56872969-C-T | ** | ||||||||
56872973-A-G | ** | ||||||||
56872975-G-A | ** | ||||||||
13801158-G-C | 11680452-G-C | ** | |||||||
13857481-G-A | 11736775-G-A | FTB16888 | ** | ||||||
13801168-G-T | 11680462-G-T | ** | |||||||
56872978-C-T | ** | ||||||||
56828231-A-T | ** | ||||||||
28815990-G-A | 26669843-G-A | ** | |||||||
11643729-G-T | ** | ||||||||
28818923-G-T | 26672776-G-T | ** | |||||||
11643704-G-GATTCA | ** | ||||||||
11643758-G-A | ** | ||||||||
14580841-C-CA | 12469041-C-CA | 9×A | ** | ||||||
13857450-G-A | 11736744-G-A | ** | |||||||
28517804-G-A | 26371657-G-A | ** | |||||||
27967276-G-GTA | 25821129-G-GTA | P1_Y2 | 9×TA | ** | |||||
13857543-ATG-A | 11736837-ATG-A | ** | |||||||
28517805-C-T | 26371658-C-T | ** | |||||||
15507811-G-A | 13395931-G-A | FT41975 | ** | ||||||
28517819-C-T | 26371672-C-T | ** | |||||||
28517824-A-G | 26371677-A-G | FT240881 | ** | ||||||
28763363-A-G | 26617216-A-G | ** | |||||||
22230694-T-A | 20068808-T-A | BY189601 | DYZ19 | ** | |||||
58982265-C-A | 56836118-C-A | ** | |||||||
9735418-G-A | 9897809-G-A | BY50742 | BY50742 | IR3_Prx | ** | ||||
28605682-T-C | 26459535-T-C | ** | |||||||
28605800-C-A | 26459653-C-A | ** | |||||||
28621362-C-A | 26475215-C-A | ** | |||||||
28624293-C-A | 26478146-C-A | ** | |||||||
28658344-A-T | 26512197-A-T | ** | |||||||
28661497-C-A | 26515350-C-A | ** | |||||||
28713355-C-A | 26567208-C-A | ** | |||||||
17490937-C-A | 15379057-C-A | ** | |||||||
2708167-A-C | 2840126-A-C | ** | |||||||
22325294-T-A | 20163408-T-A | DYZ19 | ** | ||||||
15223039-C-A | 13111125-C-A | ** | |||||||
13857496-G-A | 11736790-G-A | ** | |||||||
13857491-G-A | 11736785-G-A | ** | |||||||
13857430-T-G | 11736724-T-G | ** | |||||||
13857419-T-A | 11736713-T-A | ** | |||||||
28719849-C-A | 26573702-C-A | ** | |||||||
16089624-A-G | 13977744-A-G | ** | |||||||
23198854-GT-G | 21036968-GT-G | ** | |||||||
7048054-C-A | 7180013-C-A | ** | |||||||
23345612-C-A | 21183726-C-A | ** | |||||||
7646416-TAAAAAAA-T | 7778375-TAAAAAAA-T | 14×A | ** | ||||||
10952509-A-T | ** | ||||||||
7199476-T-G | 7331435-T-G | ** | |||||||
17222780-C-A | 15110900-C-A | ** | |||||||
22811205-C-A | 20649319-C-A | ** | |||||||
8214880-TTC-T | 8346839-TTC-T | ** | |||||||
7099219-C-A | 7231178-C-A | ** | |||||||
16906853-C-A | 14794973-C-A | ** | |||||||
23435907-C-A | 21274021-C-A | ** | |||||||
9034647-C-A | 9197038-C-A | ** | |||||||
15157307-C-A | 13045394-C-A | ** | |||||||
27960984-A-G | 25814837-A-G | P1_Y2 | ** | ||||||
13857501-G-A | 11736795-G-A | ** | |||||||
10952510-C-A | ** | ||||||||
22625084-C-A | 20463198-C-A | ** | |||||||
14701445-C-A | 12589511-C-A | ** | |||||||
14391763-C-A | 12271059-C-A | ** | |||||||
6778872-C-A | 6910831-C-A | ** | |||||||
23137539-T-C | 20975653-T-C | ** | |||||||
10952483-T-C | ** | ||||||||
8075276-C-A | 8207235-C-A | ** | |||||||
7101493-G-C | 7233452-G-C | ** | |||||||
22241599-A-T | 20079713-A-T | DYZ19 | ** | ||||||
10911410-C-A | ** | ||||||||
21922122-C-A | 19760236-C-A | ** | |||||||
7258554-C-A | 7390513-C-A | ** | |||||||
10958621-C-A | ** | ||||||||
23198015-G-C | 21036129-G-C | ** | |||||||
14988834-G-A | 12876900-G-A | FT81936 | ** | ||||||
7303684-C-A | 7435643-C-A | ** | |||||||
17478792-C-A | 15366912-C-A | ** | |||||||
10999884-C-T | ** | ||||||||
8736324-C-A | 8868283-C-A | ** | |||||||
19295006-C-A | 17183126-C-A | ** | |||||||
17537967-C-A | 15426087-C-A | ** | |||||||
18985025-C-A | 16873145-C-A | ** | |||||||
14062008-TACAAAA-T | 11941302-TACAAAA-T | ** | |||||||
4302132-C-A | 4434091-C-A | ** | |||||||
13502396-C-A | 11346720-C-A | ** | |||||||
19246033-C-T | 17134153-C-T | ** | |||||||
21211818-C-A | 19049932-C-A | ** | |||||||
13487743-TC-T | 11332067-TC-T | ** | |||||||
18923259-C-A | 16811379-C-A | ** | |||||||
21082046-C-A | 18920160-C-A | ** | |||||||
10952516-ATTTCT-A | ** | ||||||||
22854931-C-T | 20693045-C-T | ** | |||||||
16478198-GAAAAAA-G | 14366318-GAAAAAA-G | 16×A | ** | ||||||
19532481-C-A | 17420601-C-A | ZS7976 | ** | ||||||
10794243-C-A | ** | ||||||||
6756902-C-T | 6888861-C-T | ** | |||||||
13487741-C-CT | 11332065-C-CT | ** | |||||||
23875065-A-G | 21713179-A-G | FT409186 | ** | ||||||
15264745-AG-A | 13152834-AG-A | ** | |||||||
24422546-A-G | 22276399-A-G | ** | |||||||
23952969-G-A | 21806822-G-A | ** | |||||||
10830887-AATTCC-A | ** | ||||||||
10888023-A-T | ** | ||||||||
10888003-A-AC | ** | ||||||||
10887962-C-A | ** | ||||||||
28548600-C-A | 26402453-C-A | ** | |||||||
19125074-C-A | 17013194-C-A | ** | |||||||
22974140-AT-A | 20812254-AT-A | ** | |||||||
26415676-CAAAAAAAA-C | 24269529-CAAAAAAAA-C | P1_Y1 | 20×A | ** | |||||
15866804-C-A | 13754924-C-A | ** | |||||||
10656004-C-A | ** | ||||||||
19482233-C-A | 17370353-C-A | ** | |||||||
14589449-C-A | 12477649-C-A | ** | |||||||
5318232-C-A | 5450191-C-A | ** | |||||||
14376304-C-A | 12255600-C-A | ** | |||||||
23565715-C-A | 21403829-C-A | ** | |||||||
21176959-C-A | 19015073-C-A | ** | |||||||
21095731-C-A | 18933845-C-A | ** | |||||||
17676395-C-A | 15564515-C-A | ** | |||||||
7013381-C-A | 7145340-C-A | ** | |||||||
19535691-C-A | 17423811-C-A | ** | |||||||
10868519-C-A | ** | ||||||||
7111850-C-A | 7243809-C-A | ** | |||||||
10744364-G-A | ** | ||||||||
21285190-AAAAT-A | 19123304-AAAAT-A | 4×AAAT | ** | ||||||
7633148-C-A | 7765107-C-A | ** | |||||||
23612513-C-A | 21450627-C-A | ** | |||||||
11005541-T-A | ** | ||||||||
23807595-A-G | 21645709-A-G | ** | |||||||
18631801-C-A | 16519921-C-A | ** | |||||||
11643760-A-C | ** | ||||||||
24278021-GCA-G | 22131874-GCA-G | P3_b1 | ** | ||||||
21250675-C-A | 19088789-C-A | *** | |||||||
28760916-G-T | 26614769-G-T | *** | |||||||
22526299-A-T | 20364413-A-T | *** | |||||||
21189933-C-A | 19028047-C-A | *** | |||||||
21750890-G-A | *** | ||||||||
27618163-G-T | 25472016-G-T | P1_Y2 | *** | ||||||
23495813-T-A | 21333927-T-A | *** | |||||||
13487916-C-T | 11332240-C-T | *** | |||||||
19040295-C-A | 16928415-C-A | *** | |||||||
13215844-ATTT-A | 11060168-ATTT-A | 16×T | *** | ||||||
28788008-G-T | 26641861-G-T | *** | |||||||
28794113-G-T | 26647966-G-T | BY184423 | *** | ||||||
7034474-CAA-C,CA | 7166433-CAA-C,CA | 17×A | *** | ||||||
8562865-CAAAA-C | 8694824-CAAAA-C | 17×A | *** | ||||||
15918217-AT-A | 13806337-AT-A | 10×T | *** | ||||||
28755582-C-A | 26609435-C-A | *** | |||||||
13487904-G-T | 11332228-G-T | *** | |||||||
10926601-C-A | *** | ||||||||
25038146-C-A | 22891999-C-A | g1 | *** | ||||||
56833845-C-G | *** | ||||||||
10657355-C-A | *** | ||||||||
16275908-G-T | 14164028-G-T | *** | |||||||
10789335-C-T | *** | ||||||||
2892749-T-C | 3024708-T-C | FT51817 | *** | ||||||
17922524-C-A | 15810644-C-A | *** | |||||||
10987198-A-T | *** | ||||||||
26183615-G-A | 24037468-G-A | P1_Y1 | *** | ||||||
25015275-CA-C | 22869128-CA-C | g1 | *** | ||||||
10756857-T-C | *** | ||||||||
13726994-G-A | 11571318-G-A | *** | |||||||
58974916-C-A | 56828769-C-A | *** | |||||||
9174435-C-T | 9336826-C-T | *** | |||||||
18353712-A-AT | 16241832-A-AT | P6_Prx | 9×T | *** | |||||
22466379-C-G | 20304493-C-G | FGC16618 | DYZ19 | *** | |||||
17793822-ATATCTATC-A | 15681942-ATATCTATC-A | 11×TATC | *** | *** | |||||
28788010-G-A | 26641863-G-A | A16211 | *** | ||||||
9329011-C-T | 9491402-C-T | *** | |||||||
20016368-C-T | 17904488-C-T | P5_Prx | *** | ||||||
24817460-C-T | 22671313-C-T | P3_b2 | *** | ||||||
22244327-T-G | 20082441-T-G | DYZ19 | *** | ||||||
22288846-T-A | 20126960-T-A | DYZ19 | *** | ||||||
22449836-T-C | 20287950-T-C | DYZ19 | *** | ||||||
22466382-G-A | 20304496-G-A | BY221720 | DYZ19 | *** | |||||
22466383-T-A | 20304497-T-A | DYZ19 | *** | ||||||
22466391-G-C | 20304505-G-C | DYZ19 | *** | ||||||
22466414-T-C | 20304528-T-C | DYZ19 | *** | ||||||
6960237-TA-T,TAA | 7092196-TA-T,TAA | 15×A | *** | ||||||
7029318-C-A | 7161277-C-A | *** | |||||||
18659653-T-C | 16547773-T-C | *** | |||||||
10756850-C-G | *** | ||||||||
7409829-G-T | 7541788-G-T | *** | |||||||
8649367-C-A | 8781326-C-A | *** | |||||||
9403260-C-A | 9565651-C-A | *** | |||||||
10008661-C-A | 10171052-C-A | *** | |||||||
10016628-C-A | 10179019-C-A | *** | |||||||
10632504-C-T | *** | ||||||||
10654946-A-G | *** | ||||||||
10789353-T-TCAAAG | *** | ||||||||
3286227-G-A | 3418186-G-A | *** | |||||||
13258844-C-A | 11103168-C-A | *** | |||||||
13988626-C-A | 11867920-C-A | *** | |||||||
14295030-TA-T | 12174324-TA-T | 9×A | *** | ||||||
14488506-TCATG-T | 12367775-TCATG-T | *** | |||||||
15618030-A-T | 13506150-A-T | *** | |||||||
16253979-G-T | 14142099-G-T | *** | |||||||
18019103-C-A | 15907223-C-A | *** | |||||||
6734680-CTTTT-C,CTT | 6866639-CTTTT-C,CTT | 21×T | *** | ||||||
2772701-C-A | 2904660-C-A | *** | |||||||
10987192-C-T | *** | ||||||||
21559037-C-A | 19397151-C-A | *** | |||||||
10987227-C-T | *** | ||||||||
10789359-C-T | *** | ||||||||
15690099-C-A | 13578219-C-A | *** | |||||||
10987216-C-T | *** | ||||||||
20802642-A-AAT | 18640756-A-AAT | P4_Gap | *** | ||||||
25804867-T-G | 23658720-T-G | P1_b3 | *** | ||||||
3606085-C-A | 3738044-C-A | *** | |||||||
22786919-C-A | 20625033-C-A | *** | |||||||
7935996-C-A | 8067955-C-A | *** | |||||||
10987208-A-AATTCACTCCG,T | *** | ||||||||
23376986-C-A | 21215100-C-A | *** | |||||||
19409380-C-A | 17297500-C-A | *** | |||||||
15527480-C-A | 13415600-C-A | *** | |||||||
19004559-C-A | 16892679-C-A | *** | |||||||
8650130-G-A | 8782089-G-A | *** | |||||||
25206738-G-A | 23060591-G-A | g1 | *** | ||||||
23327296-CTTT-C | 21165410-CTTT-C | 11×T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 223805 | 10417334 | 7490652 | 7561244 |
Kit: 223805 | 9263819 | 7592449 | 7530932 |
Used in age calculations | 10417334 | 7592449 | 7561244 |
Counts of SNPs | 20 | 20 |
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