Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > Z2956 > M222 > Z2959 > Z46375 > DF106 > DF104 > DF105 > ZZ87 > A223 > BY3339 > A225 > A224

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
12701
BigY2
12701
19866507-T-C 17754627-T-C P5_Prx ***A*
6347750-G-A 6479709-G-A A*
6347750-G-GA 6479709-G-GA A*
13698541-T-A 11542865-T-A BY54371 DYZ17 A*
4243398-A-G 4375357-A-G BY58059 ++
7738518-C-T 7870477-C-T BY42709BY18135 YY++
14360002-G-A 12239297-G-A Y40479 YY++
16260512-CA-C 14148632-CA-C ++
17058441-C-A 14946561-C-A Y41825 Y**+
22612395-T-C 20450509-T-C BY18189 YY++
23147369-G-A 20985483-G-A BY143352 YY++
13448359-CT-C,CA 11292683-CT-C,CA *
13858120-C-T 11737414-C-T DYZ17 **
13858135-A-C 11737429-A-C DYZ17 **
13143889-T-C 10633375-T-C **
14624294-C-A 12512494-T-A **
2803921-T-G 2935880-T-G **
5957089-T-TATAC 6089048-T-TATAC 12×AC****
13143949-G-C 10633435-G-C **
13686958-GAATGC-G 11531282-GAATGC-G DYZ17 **
13855391-A-G 11734685-A-G DYZ17 **
13859333-TCCAAA-T 11738627-TCCAAA-T DYZ17 **
17926417-G-A 15814537-G-A **
18763630-A-C 16651750-A-C **
20717021-C-A 18555135-C-A P4_Prx **
22273542-CA-T 20111656-CA-T DYZ19 **
28581291-G-T 26435144-G-T CTS12357 **
28581303-G-A 26435156-G-A CTS12358 **
20025441-CT-C 17913561-CT-C P5_Prx **
2835623-TG-T 2967582-TG-T **
15259276-T-A 13147360-T-A **
22330202-T-C 20168316-T-C YFS033217 DYZ19 **
8712873-C-A 8844832-C-A Z19378 **
17192946-AAT-A 15081066-AAT-A **
23026676-C-T 20864790-C-T Y26747 **
22301581-G-T 20139695-G-T DYZ19 **
14447478-C-A 12326751-C-A **
22962041-G-A 20800155-G-A **
21890932-C-T 19729046-C-T **
21890940-A-T 19729054-A-T **
22301579-G-T 20139693-G-T DYZ19 **
22264301-T-C 20102415-T-C DYZ19 **
2699548-G-A 2831507-G-A **
58997092-C-A 56850945-C-A **
17731006-T-A 15619126-T-A **
7335572-A-G 7467531-A-G **
10004868-C-T 10167259-C-T FT373984 8×GT**
22264262-A-G 20102376-A-G DYZ19 **
9983401-C-A 10145792-C-A **
14931757-C-A 12819822-C-A **
7241985-C-A 7373944-C-A **
17802162-TCAG-T 15690282-TCAG-T **
20084532-A-G 17972652-A-G P5_Dst **
19394097-G-T 17282217-G-T **
2811415-C-A 2943374-C-A **
14297038-CTATA-C 12176332-CTATA-C 10×TA**
8325689-T-C 8457648-T-C **
15733770-C-A 13621890-C-A **
2845800-T-G 2977759-T-G **
10762958-T-A **
9040925-A-ATATAT 9203316-A-ATATAT 17×AT**
17707367-A-C 15595487-A-C **
25967686-T-TA 23821539-T-TA P1_Y1 **
10769004-G-A FGC80130 **
10937376-A-T **
10987960-G-T **
24363633-CTTTTT-C 22217486-CTTTTT-C 16×T**
10879709-A-C **
10879726-G-C **
10879733-T-A **
18672615-C-A 16560735-C-A **
10843002-A-T **
10980777-T-C **
10808964-A-C **
10808978-C-CGTACT **
10809002-C-CTGTTT **
20793542-CA-C 18631656-CA-C P4_Prx **
22520541-C-A 20358655-C-A **
10984905-G-A **
10984906-T-C **
18943851-C-A 16831971-C-A **
7238932-A-T 7370891-A-T **
14230703-C-A 12109997-C-A **
7109321-C-A 7241280-C-A **
10879716-A-C **
10984943-C-A **
10965322-T-C **
11022133-T-C **
10762972-A-G **
11036085-C-CTGA **
18712844-A-G 16600964-A-G **
19022318-C-A 16910438-C-A **
19022321-CA-C 16910441-CA-C **
19691355-G-T 17579475-G-T P5_Prx **
13483284-A-C 11327608-A-C **
27985044-AT-A 25838897-AT-A P1_Y2 **
4433458-C-A 4565417-C-A **
22301567-G-A 20139681-G-A DYZ19 **
15733854-T-G 13621974-T-G **
28474965-C-A 26328818-C-A 18×A**
10971353-G-T **
9509685-C-A 9672076-C-A **
14599052-G-T 12487252-G-T **
6651539-C-A 6783498-C-A **
14463291-CTTTTT-C 12342564-CTTTTT-C 16×T**
4470629-C-A 4602588-C-A **
15898878-C-A 13786998-C-A **
4905620-CA-C 5037579-CA-C 9×A**
6510585-C-A 6642544-C-A **
17889909-T-G 15778029-T-G **
9382372-C-A 9544763-C-A **
10976049-A-T **
2876725-C-A 3008684-C-A **
2665382-C-A 2797341-C-A **
2684477-A-T 2816436-A-T **
2725610-C-A 2857569-C-A **
2740282-T-A 2872241-T-A **
2773151-C-A 2905110-C-A **
2789316-C-T 2921275-C-T **
2928389-A-G 3060348-A-G **
2974362-C-A 3106321-C-A **
3024663-C-A 3156622-C-A **
3246444-G-T 3378403-G-T **
3254368-C-A 3386327-C-A **
3284626-G-T 3416585-G-T **
3333966-T-A 3465925-T-A **
3366661-C-A 3498620-C-A **
3626898-T-C 3758857-T-C **
3635225-C-A 3767184-C-A **
3786282-G-T 3918241-G-T **
3822785-C-A 3954744-C-A **
3822878-C-A 3954837-C-A **
3952802-T-C 4084761-T-C **
3953133-G-T 4085092-G-T **
3961936-CA-C 4093895-CA-C **
3963964-CCA-C 4095923-CCA-C **
4062733-T-A 4194692-T-A **
4228037-C-A 4359996-C-A **
4229256-G-T 4361215-G-T **
4388078-TAATGTACATTCCCACC-T 4520037-TAATGTACATTCCCACC-T **
4497806-C-A 4629765-C-A **
4505292-C-A 4637251-C-A **
4580623-T-C 4712582-T-C **
4769558-G-C 4901517-G-C **
4900770-G-T 5032729-G-T **
4976937-G-T 5108896-G-T **
5005742-T-C 5137701-T-C **
5019655-C-A 5151614-C-A **
5021800-T-A 5153759-T-A **
5108079-C-T 5240038-C-T **
5209787-CAGG-C 5341746-CAGG-C **
5296110-G-T 5428069-G-T **
5336336-G-T 5468295-G-T **
5415675-G-T 5547634-G-T **
5458720-C-A 5590679-C-A **
5620888-AT-A 5752847-AT-A **
5652823-G-T 5784782-G-T **
5675398-C-A 5807357-C-A **
5709942-C-A 5841901-C-A **
5846326-G-A 5978285-G-A **
5846365-C-A 5978324-C-A **
5870053-C-A 6002012-C-A **
5872030-T-C 6003989-T-C **
5872034-A-G 6003993-A-G **
5913325-C-A 6045284-C-A **
6079910-G-C 6211869-G-C **
6096930-A-T 6228889-A-T **
6129022-C-A 6260981-C-A **
6359095-C-CAA 6491054-C-CAA 30×A**
6449893-T-C 6581852-T-C **
6458430-C-A 6590389-C-A **
6463393-G-T 6595352-G-T **
6465384-C-A 6597343-C-A **
6478473-C-A 6610432-C-A **
6626861-C-A 6758820-C-A **
6721486-A-G 6853445-A-G **
6755782-A-C 6887741-A-C **
6765670-G-T 6897629-G-T **
6771765-C-A 6903724-C-A **
6787415-G-C 6919374-G-C **
6806818-C-A 6938777-C-A **
6930873-C-A 7062832-C-A **
6931227-T-A 7063186-T-A **
6935386-C-A 7067345-C-A **
6955033-A-G 7086992-A-G **
6956529-G-A 7088488-G-A **
6998003-TC-T 7129962-TC-T **
7062355-C-A 7194314-C-A **
7075888-A-C 7207847-A-C **
7092397-C-T 7224356-C-T **
7092398-A-G 7224357-A-G **
7092403-C-A 7224362-C-A **
7092405-C-T 7224364-C-T **
7093728-C-A 7225687-C-A **
7109594-C-A 7241553-C-A **
7135544-C-A 7267503-C-A **
7164098-T-C 7296057-T-C **
7171929-C-A 7303888-C-A **
7184335-T-C 7316294-T-C **
7188196-C-A 7320155-C-A **
7197229-C-T 7329188-C-T **
7204311-C-A 7336270-C-A **
7216660-T-C 7348619-T-C **
7221358-G-T 7353317-G-T **
7252220-A-G 7384179-A-G **
7258583-C-A 7390542-C-A **
7337378-T-C 7469337-T-C **
7358234-C-A 7490193-C-A **
7400191-C-A 7532150-C-A **
7409835-C-A 7541794-C-A **
7426752-C-A 7558711-C-A **
7432488-C-A 7564447-C-A **
7442003-T-A 7573962-T-A **
7641992-C-A 7773951-C-A **
7659732-C-T 7791691-C-T **
7759340-C-A 7891299-C-A **
7885377-A-G 8017336-A-G **
7941748-C-T 8073707-C-T **
7947046-A-T 8079005-A-T **
7994252-C-T 8126211-C-T **
7994259-A-T 8126218-A-T **
7994264-G-T 8126223-G-T **
8080642-C-A 8212601-C-A **
8169458-A-T 8301417-A-T **
8661697-C-A 8793656-C-A **
8704314-C-A 8836273-C-A **
8760596-A-T 8892555-A-T **
9421213-C-A 9583604-C-A **
9824053-A-T 9986444-A-T **
9936707-A-T 10099098-A-T **
9943495-G-T 10105886-G-T **
9966097-C-A 10128488-C-A **
10004861-G-A 10167252-G-A **
10646855-C-A **
10662271-C-A **
10666747-GCCATT-G **
10671656-C-A **
10677263-T-C **
10687985-A-T **
10691006-T-A **
10745205-C-A **
10755534-C-T **
10755542-A-C **
10760666-G-T **
10761764-T-C **
10769003-C-A **
10793204-G-T **
10793933-T-C **
10796600-C-T **
10801612-T-C **
10814814-C-T **
10834540-GCATTC-G **
10836559-C-A **
10859138-T-C **
10865018-G-T **
10870806-C-A **
10879684-C-T **
10879706-T-C **
10880678-C-A **
10902856-C-A **
10924779-C-A **
10924786-G-T FT436724 **
10942624-T-C **
10942629-TTTCAC-T **
10944245-C-A **
10976033-T-G **
10976043-A-G **
10976053-C-A **
10983520-G-T FT439165 **
10984947-A-T **
10987368-A-C **
10987966-C-T **
10987974-C-T **
10987983-C-T **
10987996-T-C **
10991165-T-C **
11007319-A-T **
11016494-C-T **
11018116-C-G **
11022069-C-G **
11022132-A-G **
13198877-C-A 11043201-C-A **
13218420-C-A 11062744-C-A **
13290946-A-C 11135270-A-C **
13311997-C-A 11156321-C-A **
13465935-G-A 11310259-G-A **
13465951-T-A 11310275-T-A **
13485469-T-C 11329793-T-C **
13487823-C-T 11332147-C-T **
13507058-G-T 11351382-G-T **
13507071-A-G 11351395-A-G **
13510623-C-A 11354947-C-A **
13526461-C-A 11370785-C-A **
13564551-C-T 11408875-C-T FTB54354 **
13564554-G-T 11408878-G-T **
11646458-G-T DYZ17 **
11646483-C-G DYZ17 **
11668446-G-A DYZ17 **
11668448-C-G DYZ17 **
11668449-G-C DYZ17 **
11669874-C-A DYZ17 **
13799098-ATGAACGGGAG-A 11678392-ATGAACGGGAG-A DYZ17 **
13828227-G-C 11707521-G-C DYZ17 **
13828342-C-A 11707636-C-A DYZ17 **
13846967-A-T 11726261-A-T DYZ17 **
13859224-G-A 11738518-G-A DYZ17 **
13866220-T-A 11745514-T-A DYZ17 **
13887262-C-A 11766556-C-A **
13928781-C-A 11808075-C-A **
13958796-C-A 11838090-C-A **
14098786-T-C 11978080-T-C **
14125773-C-A 12005067-C-A **
14198537-C-A 12077831-C-A **
14239461-A-G 12118755-A-G **
14263239-C-A 12142533-C-A **
14269913-C-A 12149207-C-A **
14284599-A-G 12163893-A-G **
14344881-C-A 12224176-C-A **
14381861-T-C 12261157-T-C **
14425406-C-A 12304681-C-A **
14443000-A-G 12322273-A-G **
14467335-G-A 12346604-G-A **
14472375-C-A 12351644-C-A **
14500223-C-A 12388428-C-A **
14517295-G-T 12405496-G-T **
14523971-T-C 12412172-T-C **
14557804-C-A 12446005-C-A **
14569388-G-T 12457588-G-T **
14589854-A-C 12478054-A-C **
14592141-A-G 12480341-A-G **
14627033-C-A 12515101-C-A **
14778853-C-A 12666923-C-A **
14806014-C-A 12694085-C-A **
14852953-C-A 12741019-C-A **
14887883-C-A 12775949-C-A **
14934421-TC-T 12822486-TC-T **
14943559-C-A 12831633-C-A **
14992860-C-G 12880945-C-G **
15092422-C-A 12980511-C-A **
15092602-A-G 12980691-A-G **
15178240-CA-C 13066326-CA-C **
15188721-A-T 13076807-A-T **
15198650-G-A 13086736-G-A **
15248151-T-C 13136237-T-C **
15262456-C-A 13150540-C-A **
15280263-T-C 13168362-T-C **
15287872-C-A 13175971-C-A **
15305718-C-A 13193817-C-A **
15324023-GTTTA-G 13212141-GTTTA-G **
15335905-A-G 13224023-A-G **
15396810-C-A 13284930-C-A **
15533440-C-A 13421560-C-A **
15556792-C-T 13444912-C-T **
15558999-C-A 13447119-C-A **
15630984-G-T 13519104-G-T **
15655695-C-T 13543815-C-T **
15700527-TA-T 13588647-TA-T **
15724249-G-T 13612369-G-T **
15816349-C-A 13704469-C-A **
15932443-C-A 13820563-C-A **
15974437-C-A 13862557-C-A **
15988123-T-C 13876243-T-C **
16032435-C-A 13920555-C-A **
16039201-C-A 13927321-C-A **
16044496-T-C 13932616-T-C **
16067208-C-A 13955328-C-A **
16171502-C-A 14059622-C-A **
16181437-C-T 14069557-C-T **
16214083-AT-A 14102203-AT-A **
16269531-G-A 14157651-G-A **
16293057-C-A 14181177-C-A **
16312365-C-T 14200485-C-T **
16336855-C-A 14224975-C-A **
16454292-T-C 14342412-T-C **
16457226-C-A 14345346-C-A **
16491958-C-A 14380078-C-A **
16492512-G-T 14380632-G-T **
16524862-C-A 14412982-C-A **
16588300-T-C 14476420-T-C **
16588307-T-C 14476427-T-C **
16588308-T-A 14476428-T-A **
16603256-T-C 14491376-T-C **
16679404-A-G 14567524-A-G 18×T**
16681415-C-G 14569535-C-G **
16705535-T-C 14593655-T-C **
16765514-C-A 14653634-C-A **
16789718-C-A 14677838-C-A **
16885809-G-T 14773929-G-T **
16931923-C-A 14820043-C-A **
16932819-C-A 14820939-C-A **
17061555-C-A 14949675-C-A **
17065845-A-G 14953965-A-G **
17098317-A-G 14986437-A-G **
17159009-C-A 15047129-C-A **
17193165-T-C 15081285-T-C **
17287433-T-G 15175553-T-G **
17342783-C-T 15230903-C-T **
17486396-C-G 15374516-C-G **
17503961-A-G 15392081-A-G **
17524284-C-A 15412404-C-A **
17562076-A-T 15450196-A-T **
17631734-A-C 15519854-A-C **
17691923-C-A 15580043-C-A **
17693594-C-A 15581714-C-A **
17731001-G-A 15619121-G-A **
17731014-CA-C 15619134-CA-C 35×A**
17770139-A-T 15658259-A-T **
17782895-G-T 15671015-G-T **
17889915-C-T 15778035-C-T **
17889919-G-C 15778039-G-C **
18003911-A-T 15892031-A-T P7_Gap **
18096500-T-C 15984620-T-C **
18098958-A-G 15987078-A-G **
18151774-C-A 16039894-C-A **
18172940-C-A 16061060-C-A **
18288586-C-A 16176706-C-A P6_Prx **
18305290-C-T 16193410-C-T P6_Prx **
18378984-T-G 16267104-T-G P6_Prx **
18386537-C-A 16274657-C-A P6_Gap **
18403307-A-T 16291427-A-T P6_Gap **
18603446-C-A 16491566-C-A **
18650481-C-A 16538601-C-A **
18670216-C-T 16558336-C-T **
18708093-A-G 16596213-A-G **
18712827-C-T 16600947-C-T **
18712839-T-C 16600959-T-C **
18716581-G-T 16604701-G-T **
18767157-C-A 16655277-C-A **
18796335-G-T 16684455-G-T **
18895681-C-A 16783801-C-A **
18924920-C-A 16813040-C-A **
18943877-T-G 16831997-T-G **
18946882-C-A 16835002-C-A **
18976698-A-G 16864818-A-G **
18994465-C-T 16882585-C-T **
19022309-C-G 16910429-C-G **
19044589-G-T 16932709-G-T **
19123270-C-A 17011390-C-A **
19183973-T-C 17072093-T-C **
19259060-A-C 17147180-A-C **
19259063-A-C 17147183-A-C **
19266683-G-T 17154803-G-T **
19331555-C-A 17219675-C-A **
19331559-A-G 17219679-A-G **
19394118-G-C 17282238-G-C **
19476635-C-T 17364755-C-T **
19597189-TTTATTATTATTATTTATTA-T 17485309-TTTATTATTATTATTTATTA-T P5_Prx **
19622056-C-G 17510176-C-G P5_Prx **
19622139-C-T 17510259-C-T P5_Prx **
19671599-A-G 17559719-A-G P5_Prx **
19759349-G-C 17647469-G-C P5_Prx **
19759349-G-GTCTT 17647469-G-GTCTT P5_Prx **
19809876-C-G 17697996-C-G P5_Prx **
19839617-A-AG 17727737-A-AG P5_Prx **
20404584-A-G 18242698-A-G P5_Dst **
20458849-G-T 18296963-G-T P5_Dst **
20493540-A-AAC 18331654-A-AAC P5_Dst **
20983058-A-AG 18821172-A-AG P4_Dst **
21043112-G-A 18881226-G-A **
21048291-C-A 18886405-C-A **
21146425-A-ATT 18984539-A-ATT 16×T**
21153699-C-A 18991813-C-A **
21200710-C-A 19038824-C-A **
21230053-C-A 19068167-C-A **
21249134-G-T 19087248-G-T **
21299239-T-C 19137353-T-C **
21315350-GT-G 19153464-GT-G **
21346302-A-C 19184416-A-C **
21394228-G-C 19232342-G-C **
21411709-C-A 19249823-C-A **
21495975-A-T 19334089-A-T **
21501016-G-T 19339130-G-T **
21511594-T-A 19349708-T-A **
21513769-C-A 19351883-C-A **
21528397-C-A 19366511-C-A **
21543759-G-T 19381873-G-T **
21563055-C-A 19401169-C-A **
21600633-A-G 19438747-A-G **
21658431-G-GA 19496545-G-GA **
21890927-A-G 19729041-A-G **
21890944-AC-A 19729058-AC-A **
21890955-T-C 19729069-T-C **
21890959-C-T 19729073-C-T **
21890968-G-A 19729082-G-A **
21890969-G-C 19729083-G-C **
21890971-C-T 19729085-C-T A6069 **
21941311-C-A 19779425-C-A **
21947124-T-C 19785238-T-C **
22049663-T-C 19887777-T-C **
22137158-A-G 19975272-A-G **
22194136-G-T 20032250-G-T **
22210708-C-A 20048822-C-A **
22264288-G-C 20102402-G-C DYZ19 **
22301593-T-A 20139707-T-A DYZ19 **
22330210-T-G 20168324-T-G DYZ19 **
22330218-A-T 20168332-A-T DYZ19 **
22518353-C-A 20356467-C-A **
22592974-C-A 20431088-C-A **
22658130-C-A 20496244-C-A **
22720497-C-A 20558611-C-A **
22804103-A-T 20642217-A-T **
22845848-C-A 20683962-C-A **
22851562-C-A 20689676-C-A **
22860449-C-A 20698563-C-A **
22962020-T-G 20800134-T-G **
22962026-T-G 20800140-T-G **
22962043-A-T 20800157-A-T **
22962049-G-A 20800163-G-A **
22962050-C-T 20800164-C-T **
22962056-C-T 20800170-C-T **
22996814-C-A 20834928-C-A **
23058439-G-A 20896553-G-A **
23098173-A-G 20936287-A-G **
23127005-T-C 20965119-T-C **
23131145-C-A 20969259-C-A **
23184247-C-A 21022361-C-A **
23279513-AGACAAGGTTTCATAATGTT-A 21117627-AGACAAGGTTTCATAATGTT-A **
23316172-C-A 21154286-C-A **
23345859-TC-T 21183973-TC-T **
23435997-AT-A 21274111-AT-A **
23633371-C-CTT 21471485-C-CTT 21×T**
24373215-C-A 22227068-C-A **
24466240-C-A 22320093-C-A **
24634137-G-T 22487990-G-T P3_t2 **
24890231-T-C 22744084-T-C g1 **
26152303-G-T 24006156-G-T P1_Y1 **
27289382-C-T 25143235-C-T P1_g3 **
27535089-G-T 25388942-G-T P1_Y2 **
27801226-A-AG 25655079-A-AG P1_Y2 **
27801298-CAATG-C 25655151-CAATG-C P1_Y2 **
27801658-T-TC 25655511-T-TC P1_Y2 **
28474952-T-G 26328805-T-G **
28514740-TG-T 26368593-TG-T **
28547478-C-A 26401331-C-A **
28555231-G-T 26409084-G-T **
28608331-C-A 26462184-C-A **
28608471-C-A 26462324-C-A **
28635634-A-T 26489487-A-T **
28723539-A-G 26577392-A-G **
28743035-C-A 26596888-C-A **
28767913-C-A 26621766-C-A **
28782814-C-A 26636667-C-A **
56836546-CCACCT-C **
56850941-G-A **
56862895-G-A **
56873931-C-A **
56877684-T-A **
56877760-G-T **
16577-T-A **
24123-T-A **
24124-T-A **
6130293-A-T 6262252-A-T ***
13858614-T-G 11737908-T-G DYZ17 ***
13867282-C-G 11746576-C-G DYZ17 ***
58974040-C-A 56827893-C-A ***
13819063-T-G 11698357-T-G DYZ17 ***
13457437-C-G 11301761-C-G ***
13138440-C-T 10627926-C-T ***
58837247-T-C 56753624-A-G ***
13143912-C-T 10633398-C-T ***
13143917-T-C 10633403-T-C ***
13446958-C-T 11291282-C-T ***
13478931-G-A 11323255-G-A ***
13647838-T-G 11492162-T-G DYZ17 ***
13647944-TCGAAAGGAAAGATAA-T 11492268-TCGAAAGGAAAGATAA-T DYZ17 ***
13647963-A-G 11492287-A-G DYZ17 ***
13647965-G-A 11492289-G-A FGC67752 Z44952 DYZ17 ***
13647969-T-C 11492293-T-C DYZ17 ***
13674367-G-A 11518691-G-A DYZ17 ***
13808066-G-T 11687360-G-T DYZ17 ***
13808079-A-T 11687373-A-T DYZ17 ***
13808080-T-C 11687374-T-C DYZ17 ***
13808088-G-A 11687382-G-A FGC24735 DYZ17 ***
13817757-A-G 11697051-A-G DYZ17 ***
13835237-A-C 11714531-A-C DYZ17 ***
13866777-G-A 11746071-G-A DYZ17 ***
13867293-G-A 11746587-G-A DYZ17 ***
23990455-GCA-G 21844308-GCA-G 9×CA***
28787273-T-G 26641126-T-G ***
58980612-T-C 56834465-T-C ***
5471889-A-G 5603848-A-G ***
13648906-C-A 11493230-C-A DYZ17 ***
13813494-A-T 11692788-A-T DYZ17 ***
13839375-A-G 11718669-A-G FTA48302 DYZ17 ***
24298894-AAC-A 22152747-AAC-A P3_t1 ***
13447214-C-T 11291538-C-T ***
13456350-A-T 11300674-A-T ***
13867027-C-A 11746321-C-A DYZ17 ***
13842630-C-A,G 11721924-C-A,G DYZ17 ***
13810203-G-A 11689497-G-A DYZ17 ***
13140535-C-T 10630021-C-T ***
13143902-C-T 10633388-C-T ***
13143947-C-T 10633433-C-T ***
13809853-C-G 11689147-C-G DYZ17 ***
13809898-G-C 11689192-G-C DYZ17 ***
13839385-G-C 11718679-G-C DYZ17 ***
13839404-A-T 11718698-A-T DYZ17 ***
13853843-C-G 11733137-C-G DYZ17 ***
13858139-T-A 11737433-T-A DYZ17 ***
28801736-A-G 26655589-A-G ***
5471875-A-G 5603834-A-G ***
5472008-G-A 5603967-G-A ***
5472010-G-A 5603969-G-A ***
6167025-CTGTG-C 6298984-CTGTG-C IR3_Dst 12×TG***
6347717-A-G 6479676-A-G ***
6402015-CG-C 6533974-CG-C ***
7453565-C-T 7585524-C-T IR1_L ***
7503851-AACAC-A 7635810-AACAC-A IR1_L 20×AC***
9068730-A-T 9231121-A-T ***
9068731-G-T 9231122-G-T ***
9068745-C-A 9231136-C-A ***
9068746-G-A 9231137-G-A FT20293 ***
9068758-A-C 9231149-A-C ***
9068770-A-C 9231161-A-C ***
9068773-A-C 9231164-A-C ***
9068782-A-C 9231173-A-C ***
9198593-CAGGA-C 9360984-CAGGA-C ***
9741354-TACAC-T 9903745-TACAC-T IR3_Prx 16×AC***
9944058-T-G 10106449-T-G ***
9971888-C-T 10134279-C-T FT369953 ***
9971889-C-A 10134280-C-A ***
9971894-C-T 10134285-C-T ***
10017747-C-T 10180138-C-T ***
10019375-C-CT 10181766-C-CT ***
10020511-C-A 10182902-C-A 10×AAAAG***
10026389-A-G 10188780-A-G ***
13104633-AG-A 10594119-AG-A ***
13138009-T-C 10627495-T-C ***
13138113-C-T 10627599-C-T ***
13138391-A-ACCATT 10627877-A-ACCATT 8×CCATT***
13138408-C-T 10627894-C-T ***
13139301-ATTCAG-A,G 10628787-ATTCAG-A,G ***
13139307-T-C 10628793-T-C ***
13139309-G-C 10628795-G-C ***
13139608-T-C 10629094-T-C ***
13143892-C-T 10633378-C-T ***
13406072-G-T 11250396-G-T ***
13406077-G-C 11250401-G-C ***
13406079-TG-T 11250403-TG-T ***
13446711-A-T 11291035-A-T ***
13446730-T-C 11291054-T-C ***
13446748-C-G 11291072-C-G ***
13446933-A-C 11291257-A-C ***
13447212-A-C,T 11291536-A-C,T ***
13451191-T-C,TCCATTCCATTCCATTC 11295515-T-C,TCCATTCCATTCCATTC ***
13452613-T-C 11296937-T-C ***
13452638-T-C 11296962-T-C ***
13454313-T-G 11298637-T-G ***
13456361-T-C 11300685-T-C ***
13457341-A-C 11301665-A-C BY85491 ***
13457439-T-A 11301763-T-A ***
13459381-C-T 11303705-C-T BY85577 ***
13466928-AAG-C 11311252-AAG-C ***
13488054-G-C 11332378-G-C ***
13488063-A-T 11332387-A-T ***
13488064-C-T 11332388-C-T ***
13521668-T-G 11365992-T-G ***
13648957-TGTAAA-T 11493281-TGTAAA-T DYZ17 ***
13651253-A-G 11495577-A-G DYZ17 ***
13653039-T-A 11497363-T-A DYZ17 ***
13660495-C-A 11504819-C-A DYZ17 ***
13660565-T-G 11504889-T-G BY32878 DYZ17 ***
13674233-A-G 11518557-A-G DYZ17 ***
13674359-A-T 11518683-A-T DYZ17 ***
13680775-G-C 11525099-G-C DYZ17 ***
13683145-T-A 11527469-T-A DYZ17 ***
13683238-T-G 11527562-T-G DYZ17 ***
13686932-G-A 11531256-G-A DYZ17 ***
13690804-A-T 11535128-A-T DYZ17 ***
13701313-GATATC-G 11545637-GATATC-G DYZ17 ***
13710702-G-T 11555026-G-T DYZ17 ***
13728549-G-A 11572873-G-A DYZ17 ***
13728554-G-C 11572878-G-C DYZ17 ***
13728560-G-T 11572884-G-T DYZ17 ***
13728569-G-T 11572893-G-T DYZ17 ***
13728580-G-A 11572904-G-A DYZ17 ***
13728590-A-G 11572914-A-G DYZ17 ***
13817870-A-C 11697164-A-C DYZ17 ***
13818630-T-A 11697924-T-A DYZ17 ***
13820774-A-G 11700068-A-G DYZ17 ***
13820788-G-C 11700082-G-C DYZ17 ***
13820801-A-C 11700095-A-C DYZ17 ***
13820803-G-T 11700097-G-T DYZ17 ***
13829438-T-G 11708732-T-G DYZ17 ***
13829475-G-A 11708769-G-A DYZ17 ***
13829510-G-A 11708804-G-A DYZ17 ***
13829540-G-A 11708834-G-A DYZ17 ***
13834075-A-T 11713369-A-T DYZ17 ***
13835227-A-G 11714521-A-G DYZ17 ***
13836307-T-A 11715601-T-A DYZ17 ***
13836309-G-A 11715603-G-A DYZ17 ***
13836386-A-T 11715680-A-T DYZ17 ***
13838692-G-C 11717986-G-C DYZ17 ***
13838702-G-A 11717996-G-A DYZ17 ***
13839052-C-A 11718346-C-A DYZ17 ***
13839055-C-G 11718349-C-G FT417990 DYZ17 ***
13839376-G-C 11718670-G-C DYZ17 ***
13839378-G-C 11718672-G-C DYZ17 ***
13839383-A-T 11718677-A-T DYZ17 ***
13839391-G-C 11718685-G-C DYZ17 ***
13839413-C-A 11718707-C-A DYZ17 ***
13839417-G-A 11718711-G-A DYZ17 ***
13839814-T-TGAAATGGAATGGAAA 11719108-T-TGAAATGGAATGGAAA DYZ17 ***
13839911-G-A 11719205-G-A DYZ17 ***
13841490-A-G 11720784-A-G FT70968 DYZ17 ***
13844558-C-T 11723852-C-T DYZ17 ***
13844572-GTGGAACGGAATAGAA-G 11723866-GTGGAACGGAATAGAA-G DYZ17 ***
13844638-T-A 11723932-T-A DYZ17 ***
13844642-A-C 11723936-A-C DYZ17 ***
13844644-C-G 11723938-C-G DYZ17 ***
13844649-G-A 11723943-G-A BY30155 DYZ17 ***
13844654-G-A 11723948-G-A DYZ17 ***
13844663-C-T 11723957-C-T DYZ17 ***
13845476-G-C 11724770-G-C DYZ17 ***
13845494-T-C 11724788-T-C FTA43195 DYZ17 ***
13845541-A-AAATGGAATGGAATGG 11724835-A-AAATGGAATGGAATGG DYZ17 8×AATGG***
13846548-T-A 11725842-T-A DYZ17 ***
13846562-T-A 11725856-T-A DYZ17 ***
13847493-T-G 11726787-T-G DYZ17 ***
13851265-T-G 11730559-T-G DYZ17 ***
13851344-A-ATGGAC 11730638-A-ATGGAC DYZ17 ***
13851708-AT-A,ATAGATA 11731002-AT-A,ATAGATA DYZ17 ***
13853362-T-G 11732656-T-G DYZ17 ***
13853386-C-T 11732680-C-T BY91499 DYZ17 ***
13856708-A-G 11736002-A-G DYZ17 5×AATGG***
13858584-G-A 11737878-G-A DYZ17 ***
13859340-G-T 11738634-G-T DYZ17 ***
13863328-C-A 11742622-C-A BY156376 DYZ17 ***
13863338-G-T 11742632-G-T BY176709 DYZ17 ***
13863344-G-A 11742638-G-A FT307736 DYZ17 ***
13863436-ATGCAATGGAT-A 11742730-ATGCAATGGAT-A DYZ17 ***
13863449-C-G 11742743-C-G DYZ17 ***
13865763-T-A 11745057-T-A DYZ17 ***
13865775-G-T 11745069-G-T DYZ17 ***
13866814-A-G 11746108-A-G DYZ17 ***
13867059-C-G 11746353-C-G DYZ17 ***
13867290-A-G 11746584-A-G DYZ17 ***
13867826-C-G 11747120-C-G DYZ17 ***
13867831-A-G 11747125-A-G DYZ17 ***
13868630-T-C,G 11747924-T-C,G DYZ17 ***
13868636-C-G 11747930-C-G DYZ17 ***
15024746-T-A 12912834-T-A PR1695 ***
15248913-G-A 13136999-G-A Y93348 ***
15811022-G-T 13699142-G-T PR5663 ***
15811027-C-A 13699147-C-A ***
17991841-TAGTTCAAGA-T 15879961-TAGTTCAAGA-T P7_Prx ***
18353228-A-G 16241348-A-G P6_Prx ***
18353233-TAC-T 16241353-TAC-T P6_Prx ***
18639018-AGT-A,T 16527138-AGT-A,T 26×GT***
19036703-G-GTT 16924823-G-GTT 40×T***
20001451-T-C 17889571-T-C P5_Prx ***
20012744-AGT-A 17900864-AGT-A P5_Prx ***
20213005-TTTCTTCTTCTTC-T,TTTC 18051119-TTTCTTCTTCTTC-T,TTTC P5_Dst 26×TTC***
20669272-TTTG-T 18507386-TTTG-T P4_Prx 11×TTG***
20927099-G-GTTTTTTTTTTT 18765213-G-GTTTTTTTTTTT P4_Dst 35×T***
22147842-T-C 19985956-T-C ***
22245729-ACT-A 20083843-ACT-A DYZ19 ***
22245737-GC-AG,G 20083851-GC-AG,G DYZ19 ***
22291024-A-G 20129138-A-G DYZ19 ***
22339733-G-T 20177847-G-T DYZ19 ***
22341581-A-G,T 20179695-A-G,T DYZ19 ***
22436719-A-C 20274833-A-C BY52497 DYZ19 ***
22451546-G-C 20289660-G-C DYZ19 ***
22506475-C-G 20344589-C-G DYZ19 ***
22807914-T-G 20646028-T-G ******
24120628-C-T 21974481-C-T P3_b1 ***
24412123-T-A 22265976-T-A ***
24835860-TA-T 22689713-TA-T P3_b2 11×A***
25447296-AGTT-A 23301149-AGTT-A P2_r2 ***
25462345-GACAC-G 23316198-GACAC-G P2_r2 22×AC***
25689881-T-G 23543734-T-G P1_b3 ***
26392991-T-TCA 24246844-T-TCA P1_Y1 15×CA***
27082369-CAGA-C 24936222-CAGA-C P1_r4 5×AGA***
27775583-CA-C 25629436-CA-C P1_Y2 ***
27791839-T-G 25645692-T-G P1_Y2 ***
27791848-T-G 25645701-T-G P1_Y2 ***
27992022-A-AG 25845875-A-AG P1_Y2 ***
28784589-C-G 26638442-C-G ***
28784705-G-A 26638558-G-A ***
28784727-G-C 26638580-G-C ***
28784738-T-C 26638591-T-C ***
28785604-A-T 26639457-A-T ***
28785779-A-G 26639632-A-G ***
28789205-A-T 26643058-A-T ***
28790595-G-C 26644448-G-C ***
28790598-A-T 26644451-A-T ***
28790599-T-A 26644452-T-A ***
28796099-A-G 26649952-A-G ***
28796126-G-A 26649979-G-A ***
28799810-GTGGCA-G,T 26653663-GTGGCA-G,T ***
28799850-G-A 26653703-G-A ***
28800119-G-A 26653972-G-A ***
28801747-G-C 26655600-G-C ***
28805550-T-G 26659403-T-G ***
28814691-AG-A,G 26668544-AG-A,G ***
58908819-A-C 56682052-T-G ***
58973956-C-G 56827809-C-G ***
58973996-GATTCC-CATTCC,G 56827849-GATTCC-CATTCC,G 5×ATTCC***
58974026-C-T 56827879-C-T ***
58974072-A-ATCCGATTCC 56827925-A-ATCCGATTCC ***
58981804-C-G 56835657-C-G ***
13542959-AC-A 11387283-AC-A ***
13143897-A-C,T 10633383-A-C,T ***
58978384-C-A,G 56832237-C-A,G ***
13801547-T-A,C 11680841-T-A,C DYZ17 ***
13463893-G-A,T 11308217-G-A,T ***
13447204-A-C,T 11291528-A-C,T ***
9300170-ACC-A 9462561-ACC-A ***
18354240-AG-A 16242360-AG-A P6_Prx ***
17491636-C-A 15379756-C-A ***
13475215-C-G,T 11319539-C-G,T ***
13140124-C-A,T 10629610-C-A,T ***
13447197-G-A,C 11291521-G-A,C ***
25096447-AG-A,AGGAAAGAAAGAAA 22950300-AG-A,AGGAAAGAAAGAAA g1 ***
16914104-G-GCT 14802224-G-GCT 9×CT***
28800214-A-T 26654067-A-T ***
27396774-G-T 25250627-G-T P1_g3 ***
2861534-CAAAAA-C 2993493-CAAAAA-C 25×A***
56832905-C-T ***
10946839-C-A ***
10033029-C-A 10195420-C-A ***
9125371-G-T ***
4075739-G-T 4207698-G-T ***
5490103-G-T 5622062-G-T ***
5627849-C-A 5759808-C-A ***
6957108-C-A 7089067-C-A ***
7101423-C-A 7233382-C-A ***
7125089-C-A 7257048-C-A ***
7287076-C-A 7419035-C-A ***
7290426-C-A 7422385-C-A ***
7290427-C-A 7422386-C-A ***
7363642-C-A 7495601-C-A ***
7568782-C-A 7700741-C-A ***
7677488-G-T 7809447-G-T ***
7683427-C-A 7815386-C-A FT195560 ***
7894502-C-A 8026461-C-A ***
7899229-C-A 8031188-C-A ***
7933628-C-A 8065587-C-A ***
8434652-C-T 8566611-C-T ***
8760532-TTTTTTG-A,TTTG 8892491-TTTTTTG-A,TTTG ***
9437605-T-C 9599996-T-C ***
9512138-C-A 9674529-C-A ***
9774752-C-A 9937143-C-A ***
10022020-C-T 10184411-C-T ***
10671567-G-A,T ***
10685748-A-G ***
10687997-T-A ***
10688017-T-C ***
10688018-TC-T,TT ***
10776522-CA-C,GG ***
10989426-CA-C ***
11016318-A-T ***
11024596-C-A ***
13202947-T-C 11047271-T-C ***
13462238-G-T 11306562-G-T ***
13463747-C-T 11308071-C-T ***
13478710-C-A 11323034-C-A ***
13488525-T-A 11332849-T-A ***
13566492-AC-A 11410816-AC-A ***
13575682-G-T 11420006-G-T ***
13624442-C-A 11468766-C-A BY86720 ***
13855994-TA-T 11735288-TA-T DYZ17 ***
14002484-C-A 11881778-C-A ***
14017766-C-A 11897060-C-A ***
14052006-C-A 11931300-C-A ***
14236799-A-G 12116093-A-G ***
14363327-C-A 12242622-C-A ***
14458558-CAAAAAAAA-C 12337831-CAAAAAAAA-C 21×A***
14464165-ATTT-A,ATTTT 12343438-ATTT-A,ATTTT 18×T***
14531071-A-T 12419272-A-T ***
14600810-C-A 12489010-C-A ***
15107117-A-AT 12995204-A-AT 9×T***
15714446-G-A 13602566-G-A FT304833 ***
16095463-C-A 13983583-C-A ***
16194802-G-GA 14082922-G-GA 8×A***
16290516-C-A 14178636-C-A ***
16360603-C-A 14248723-C-A ***
16583465-G-T 14471585-G-T ***
16688502-C-A 14576622-C-A ***
16855422-C-A 14743542-C-A ***
16930732-C-G 14818852-C-G ***
17244215-G-T 15132335-G-T ***
17371413-C-A 15259533-C-A ***
17902840-T-C 15790960-T-C ***
18035461-T-C 15923581-T-C ***
18191936-G-T 16080056-G-T ***
18253555-C-A 16141675-C-A ***
18540210-C-A 16428330-C-A ***
18573457-G-T 16461577-G-T ***
18850908-C-A 16739028-C-A ***
19126238-C-A 17014358-C-A ***
19322444-C-A 17210564-C-A ***
19382389-C-A 17270509-C-A ***
21048097-C-A 18886211-C-A ***
21249111-G-T 19087225-G-T ***
21712136-C-T 19550250-C-T ***
22067395-T-G 19905509-T-G ***
22900023-A-G 20738137-A-G ***
23198279-C-T 21036393-C-T ***
23377696-C-T 21215810-C-T ***
23389579-T-G 21227693-T-G ***
23517708-G-T 21355822-G-T ***
23579511-C-A 21417625-C-A ***
24406873-C-A 22260726-C-A ***
28370088-T-G 26223941-T-G P1_gr2 ***
28660434-A-T 26514287-A-T ***
28701469-C-A 26555322-C-A ***
28799496-G-C 26653349-G-C ***
28800226-G-A 26654079-G-A ***
28800227-G-T 26654080-G-T ***
28800232-G-C 26654085-G-C ***
56847422-TCC-T ***
56847431-T-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.