Farrell
FTDNA: 172840, BigY2: 172840Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 172840 | BigY2 172840 |
---|---|---|---|---|---|---|---|---|
hg19:Y:22227281-C-A hg38:Y:20065395-C-A | DYZ19 | *** | A* | |||||
hg19:Y:25507697-T-C hg38:Y:23361550-T-C | P1_gr1 | *** | A* | |||||
hg19:Y:25869681-T-C hg38:Y:23723534-T-C | P1_Y1 | *** | A* | |||||
hg19:Y:13687742-G-C hg38:Y:11532066-G-C | DYZ17 | A* | ||||||
hg19:Y:3876379-C-T hg38:Y:4008338-C-T | DC143 | + | + | |||||
hg19:Y:9382054-T-C hg38:Y:9544445-T-C | DC145 | Y | + | |||||
hg19:Y:9382079-A-T hg38:Y:9544470-A-T | DC146 | Y | + | |||||
hg19:Y:22484007-G-C hg38:Y:20322121-G-C | BY48297 | DYZ19 | *** | + | ||||
hg19:Y:8532547-A-C hg38:Y:8664506-A-C | DC144 | Y | Y | + | + | |||
hg19:Y:9795256-G-A hg38:Y:9957647-G-A | DC147 | Y | + | + | ||||
hg19:Y:14317126-C-T hg38:Y:12196420-C-T | DC148 | Y | Y | + | + | |||
hg19:Y:18946422-T-C hg38:Y:16834542-T-C | DC149 | Y | Y | + | + | |||
hg19:Y:21825578-C-A hg38:Y:19663692-C-A | DC150 | Y | Y | + | + | |||
hg19:Y:22237809-A-G hg38:Y:20075923-A-G | DYZ19 | *** | * | |||||
hg19:Y:20804885-GTATATATATATATA-G hg38:Y:18642999-GTATATATATATATA-G | P4_Gap | 15×TA | ** | * | ||||
hg19:Y:22255882-G-T hg38:Y:20093996-G-T | DYZ19 | * | ||||||
hg19:Y:18753379-G-T hg38:Y:16641499-G-T | ** | |||||||
hg19:Y:13567097-G-A hg38:Y:11411421-G-A | ** | |||||||
hg19:Y:4505413-GAT-G hg38:Y:4637372-GAT-G | ** | |||||||
hg19:Y:28642809-GACAC-G hg38:Y:26496662-GACAC-G | 22×AC | ** | ||||||
hg19:Y:14992506-C-A hg38:Y:12880591-C-A | ** | |||||||
hg19:Y:15323457-T-A hg38:Y:13211575-T-A | Y132210 | FGC8027 | ** | |||||
hg19:Y:5858470-C-T hg38:Y:5990429-C-T | FT325298 | ** | ||||||
hg19:Y:13597402-C-T hg38:Y:11441726-C-T | Z10478 | ** | ||||||
hg19:Y:14717979-G-T hg38:Y:12606047-G-T | ** | |||||||
hg19:Y:19127644-ATAT-A hg38:Y:17015764-ATAT-A | ** | |||||||
hg19:Y:9382101-A-G hg38:Y:9544492-A-G | ** | |||||||
hg19:Y:9382151-T-C hg38:Y:9544542-T-C | FT109134 | ** | ** | |||||
hg19:Y:9947215-C-T hg38:Y:10109606-C-T | ** | |||||||
hg19:Y:13465973-C-A hg38:Y:11310297-C-A | ** | |||||||
hg19:Y:23825721-T-C hg38:Y:21663835-T-C | ** | |||||||
hg19:Y:13226919-C-A hg38:Y:11071243-C-A | ** | |||||||
hg19:Y:22222217-T-G hg38:Y:20060331-T-G | DYZ19 | ** | ||||||
hg19:Y:15276494-TA-T hg38:Y:13164583-TA-T | ** | |||||||
hg19:Y:8710064-C-A hg38:Y:8842023-C-A | ** | |||||||
hg19:Y:13996118-C-A hg38:Y:11875412-C-A | ** | |||||||
hg19:Y:18730988-C-A hg38:Y:16619108-C-A | ** | |||||||
hg19:Y:16531079-A-C hg38:Y:14419199-A-C | ** | |||||||
hg19:Y:14188098-C-A hg38:Y:12067392-C-A | ** | |||||||
hg19:Y:15606463-C-A hg38:Y:13494583-C-A | ** | |||||||
hg19:Y:13457805-C-G hg38:Y:11302129-C-G | ** | |||||||
hg19:Y:13460990-C-T hg38:Y:11305314-C-T | ** | |||||||
hg19:Y:17372154-C-A hg38:Y:15260274-C-A | FT149499 | ** | ||||||
hg19:Y:20557684-G-T hg38:Y:18395798-G-T | P5_Dst | ** | ||||||
hg19:Y:8749066-C-A hg38:Y:8881025-C-A | ** | |||||||
hg19:Y:22056439-A-C hg38:Y:19894553-A-C | ** | |||||||
hg19:Y:6934661-C-A hg38:Y:7066620-C-A | ** | |||||||
hg19:Y:23059609-C-A hg38:Y:20897723-C-A | ** | |||||||
hg38:Y:10688030-C-A | ** | |||||||
hg19:Y:18611736-C-A hg38:Y:16499856-C-A | ** | |||||||
hg38:Y:10760387-T-TTGAAC | ** | |||||||
hg38:Y:56835688-C-T | ** | |||||||
hg19:Y:13465956-C-T hg38:Y:11310280-C-T | ** | |||||||
hg19:Y:20440395-G-GTTC hg38:Y:18278509-G-GTTC | P5_Dst | ** | ||||||
hg19:Y:15138002-G-T hg38:Y:13026089-G-T | F11612 | 9×T | ** | |||||
hg19:Y:24595383-AG-A hg38:Y:22449236-AG-A | P3_t2 | ** | ||||||
hg19:Y:8856932-A-G hg38:Y:8988891-A-G | ** | |||||||
hg19:Y:15115453-AT-A hg38:Y:13003540-AT-A | 9×T | ** | ||||||
hg19:Y:3229154-CAAAAAAA-C hg38:Y:3361113-CAAAAAAA-C | 20×A | ** | ||||||
hg38:Y:10987434-T-A | ** | |||||||
hg38:Y:10987435-A-T | ** | |||||||
hg38:Y:10987440-AT-A | ** | |||||||
hg38:Y:10987459-C-T | ** | |||||||
hg38:Y:56851430-G-A | ** | |||||||
hg19:Y:7536499-C-A hg38:Y:7668458-C-A | ** | |||||||
hg38:Y:10688061-A-T | ** | |||||||
hg19:Y:8762007-C-A hg38:Y:8893966-C-A | ** | |||||||
hg38:Y:11016316-G-A | ** | |||||||
hg19:Y:19745025-T-C hg38:Y:17633145-T-C | BY211933 | P5_Prx | ** | |||||
hg19:Y:13993443-C-A hg38:Y:11872737-C-A | ** | |||||||
hg19:Y:7306766-C-A hg38:Y:7438725-C-A | ** | |||||||
hg38:Y:10780512-C-G | ** | |||||||
hg19:Y:20751889-T-C hg38:Y:18590003-T-C | P4_Prx | ** | ||||||
hg19:Y:2729819-C-G hg38:Y:2861778-C-G | ** | |||||||
hg19:Y:2787273-A-G hg38:Y:2919232-A-G | ** | |||||||
hg19:Y:2928799-G-T hg38:Y:3060758-G-T | ** | |||||||
hg19:Y:3112411-T-C hg38:Y:3244370-T-C | ** | |||||||
hg19:Y:3179792-G-T hg38:Y:3311751-G-T | ** | |||||||
hg19:Y:3295660-G-T hg38:Y:3427619-G-T | ** | |||||||
hg19:Y:3323743-C-A hg38:Y:3455702-C-A | ** | |||||||
hg19:Y:3440392-C-A hg38:Y:3572351-C-A | ** | |||||||
hg19:Y:3491959-A-G hg38:Y:3623918-A-G | FT368193 | ** | ||||||
hg19:Y:3536212-C-A hg38:Y:3668171-C-A | ** | |||||||
hg19:Y:3640767-A-C hg38:Y:3772726-A-C | ** | |||||||
hg19:Y:3649320-C-A hg38:Y:3781279-C-A | ** | |||||||
hg19:Y:3656886-T-C hg38:Y:3788845-T-C | ** | |||||||
hg19:Y:3677038-C-A hg38:Y:3808997-C-A | ** | |||||||
hg19:Y:3678218-C-T hg38:Y:3810177-C-T | FT275820 | ** | ||||||
hg19:Y:3978230-A-G hg38:Y:4110189-A-G | ** | |||||||
hg19:Y:3990640-T-G hg38:Y:4122599-T-G | ** | |||||||
hg19:Y:4003177-T-C hg38:Y:4135136-T-C | ** | |||||||
hg19:Y:4070744-G-C hg38:Y:4202703-G-C | ** | |||||||
hg19:Y:4120115-G-T hg38:Y:4252074-G-T | ** | |||||||
hg19:Y:4194390-T-C hg38:Y:4326349-T-C | ** | |||||||
hg19:Y:4223342-C-A hg38:Y:4355301-C-A | ** | |||||||
hg19:Y:4332832-C-A hg38:Y:4464791-C-A | ** | |||||||
hg19:Y:4357718-T-C hg38:Y:4489677-T-C | ** | |||||||
hg19:Y:4357843-T-C hg38:Y:4489802-T-C | ** | |||||||
hg19:Y:4357991-G-T hg38:Y:4489950-G-T | ** | |||||||
hg19:Y:4407690-G-T hg38:Y:4539649-G-T | ** | |||||||
hg19:Y:4408895-T-TA hg38:Y:4540854-T-TA | 8×A | ** | ||||||
hg19:Y:4473028-C-A hg38:Y:4604987-C-A | ** | |||||||
hg19:Y:4473465-G-T hg38:Y:4605424-G-T | ** | |||||||
hg19:Y:4473487-G-T hg38:Y:4605446-G-T | ** | |||||||
hg19:Y:4473647-G-T hg38:Y:4605606-G-T | ** | |||||||
hg19:Y:4491858-G-A hg38:Y:4623817-G-A | ** | |||||||
hg19:Y:4505482-T-C hg38:Y:4637441-T-C | ** | |||||||
hg19:Y:4552689-G-A hg38:Y:4684648-G-A | ** | |||||||
hg19:Y:4560750-C-A hg38:Y:4692709-C-A | ** | |||||||
hg19:Y:4568445-CT-C hg38:Y:4700404-CT-C | ** | |||||||
hg19:Y:4657057-T-C hg38:Y:4789016-T-C | ** | |||||||
hg19:Y:4757737-C-A hg38:Y:4889696-C-A | ** | |||||||
hg19:Y:4804609-C-G hg38:Y:4936568-C-G | ** | |||||||
hg19:Y:4863540-T-C hg38:Y:4995499-T-C | ** | |||||||
hg19:Y:4996176-C-A hg38:Y:5128135-C-A | ** | |||||||
hg19:Y:5081165-C-A hg38:Y:5213124-C-A | ** | |||||||
hg19:Y:5139886-T-G hg38:Y:5271845-T-G | ** | |||||||
hg19:Y:5139920-A-C hg38:Y:5271879-A-C | ** | |||||||
hg19:Y:5139933-C-G hg38:Y:5271892-C-G | ** | |||||||
hg19:Y:5190071-C-A hg38:Y:5322030-C-A | ** | |||||||
hg19:Y:5235196-G-T hg38:Y:5367155-G-T | ** | |||||||
hg19:Y:5249107-G-A hg38:Y:5381066-G-A | ** | |||||||
hg19:Y:5256660-A-C hg38:Y:5388619-A-C | ** | |||||||
hg19:Y:5313641-G-T hg38:Y:5445600-G-T | ** | |||||||
hg19:Y:5368190-G-T hg38:Y:5500149-G-T | ** | |||||||
hg19:Y:5471809-C-A hg38:Y:5603768-C-A | ** | |||||||
hg19:Y:5562124-G-T hg38:Y:5694083-G-T | ** | |||||||
hg19:Y:5587082-T-C hg38:Y:5719041-T-C | ** | |||||||
hg19:Y:5626073-T-G hg38:Y:5758032-T-G | ** | |||||||
hg19:Y:5649770-G-T hg38:Y:5781729-G-T | ** | |||||||
hg19:Y:5728086-C-A hg38:Y:5860045-C-A | ** | |||||||
hg19:Y:5781826-C-A hg38:Y:5913785-C-A | ** | |||||||
hg19:Y:5781880-C-A hg38:Y:5913839-C-A | ** | |||||||
hg19:Y:5824050-G-GGA hg38:Y:5956009-G-GGA | 10×GA | ** | ||||||
hg19:Y:5844282-A-T hg38:Y:5976241-A-T | ** | |||||||
hg19:Y:5865516-G-T hg38:Y:5997475-G-T | ** | |||||||
hg19:Y:5944283-CA-C hg38:Y:6076242-CA-C | ** | |||||||
hg19:Y:5956899-C-A hg38:Y:6088858-C-A | ** | |||||||
hg19:Y:6091038-A-T hg38:Y:6222997-A-T | ** | |||||||
hg19:Y:6384564-C-A hg38:Y:6516523-C-A | ** | |||||||
hg19:Y:6434562-A-G hg38:Y:6566521-A-G | ** | |||||||
hg19:Y:6460107-A-T hg38:Y:6592066-A-T | ** | |||||||
hg19:Y:6519627-T-C hg38:Y:6651586-T-C | ** | |||||||
hg19:Y:6580028-A-G hg38:Y:6711987-A-G | ** | |||||||
hg19:Y:6693022-A-G hg38:Y:6824981-A-G | ** | |||||||
hg19:Y:6694806-A-G hg38:Y:6826765-A-G | ** | |||||||
hg19:Y:6772187-C-A hg38:Y:6904146-C-A | ** | |||||||
hg19:Y:6957754-C-G hg38:Y:7089713-C-G | ** | |||||||
hg19:Y:7029879-T-G hg38:Y:7161838-T-G | ** | |||||||
hg19:Y:7029913-T-C hg38:Y:7161872-T-C | ** | |||||||
hg19:Y:7076276-G-C hg38:Y:7208235-G-C | ** | |||||||
hg19:Y:7111120-C-A hg38:Y:7243079-C-A | ** | |||||||
hg19:Y:7143326-T-C hg38:Y:7275285-T-C | ** | |||||||
hg19:Y:7183917-C-G hg38:Y:7315876-C-G | ** | |||||||
hg19:Y:7224288-C-T hg38:Y:7356247-C-T | ** | |||||||
hg19:Y:7243661-A-G hg38:Y:7375620-A-G | ** | |||||||
hg19:Y:7281834-C-A hg38:Y:7413793-C-A | ** | |||||||
hg19:Y:7306517-A-G hg38:Y:7438476-A-G | ** | |||||||
hg19:Y:7310413-G-T hg38:Y:7442372-G-T | ** | |||||||
hg19:Y:7311946-A-G hg38:Y:7443905-A-G | ** | |||||||
hg19:Y:7313537-C-A hg38:Y:7445496-C-A | ** | |||||||
hg19:Y:7390179-C-T hg38:Y:7522138-C-T | FT145802 | ** | ||||||
hg19:Y:7428182-C-A hg38:Y:7560141-C-A | ** | |||||||
hg19:Y:7475370-C-A hg38:Y:7607329-C-A | IR1_L | ** | ||||||
hg19:Y:7635959-G-A hg38:Y:7767918-G-A | ** | |||||||
hg19:Y:7711625-C-T hg38:Y:7843584-C-T | ** | |||||||
hg19:Y:7753570-G-C hg38:Y:7885529-G-C | ** | |||||||
hg19:Y:7820983-C-A hg38:Y:7952942-C-A | ** | |||||||
hg19:Y:8110723-G-C hg38:Y:8242682-G-C | ** | |||||||
hg19:Y:8479478-T-C hg38:Y:8611437-T-C | ** | |||||||
hg19:Y:8673084-C-G hg38:Y:8805043-C-G | ** | |||||||
hg19:Y:8816379-C-A hg38:Y:8948338-C-A | ** | |||||||
hg38:Y:9112866-G-T | ** | |||||||
hg38:Y:9118188-G-T | ** | |||||||
hg19:Y:9034465-G-C hg38:Y:9196856-G-C | ** | |||||||
hg19:Y:9082165-A-G hg38:Y:9244556-A-G | ** | |||||||
hg19:Y:9371496-A-G hg38:Y:9533887-A-G | ** | |||||||
hg19:Y:9508015-TTA-T hg38:Y:9670406-TTA-T | ** | |||||||
hg19:Y:9509448-T-C hg38:Y:9671839-T-C | ** | |||||||
hg19:Y:9513292-G-T hg38:Y:9675683-G-T | ** | |||||||
hg19:Y:9538060-C-A hg38:Y:9700451-C-A | IR3_Prx | ** | ||||||
hg19:Y:9820525-C-G hg38:Y:9982916-C-G | ** | |||||||
hg19:Y:9931461-C-T hg38:Y:10093852-C-T | ** | |||||||
hg19:Y:9936717-G-T hg38:Y:10099108-G-T | ** | |||||||
hg19:Y:9962547-C-A hg38:Y:10124938-C-A | ** | |||||||
hg19:Y:10004975-T-C hg38:Y:10167366-T-C | ** | |||||||
hg19:Y:10004988-C-A hg38:Y:10167379-C-A | ** | |||||||
hg19:Y:10045296-A-G hg38:Y:10207687-A-G | ** | |||||||
hg38:Y:10658320-C-A | ** | |||||||
hg38:Y:10659560-T-C | ** | |||||||
hg38:Y:10661075-T-C | ** | |||||||
hg38:Y:10661277-C-A | ** | |||||||
hg38:Y:10688006-A-G | ** | |||||||
hg38:Y:10688029-C-T | ** | |||||||
hg38:Y:10688031-A-T | ** | |||||||
hg38:Y:10688044-C-CCAACA | ** | |||||||
hg38:Y:10691052-C-CCACAA | ** | |||||||
hg38:Y:10773335-C-T | ** | |||||||
hg38:Y:10777675-G-T | ** | |||||||
hg38:Y:10777920-C-A | ** | |||||||
hg38:Y:10782932-A-G | ** | |||||||
hg38:Y:10785277-C-CCAATA | ** | |||||||
hg38:Y:10785760-C-A | ** | |||||||
hg38:Y:10794643-G-T | ** | |||||||
hg38:Y:10846423-T-C | ** | |||||||
hg38:Y:10847131-T-C | ** | |||||||
hg38:Y:10856298-T-C | ** | |||||||
hg38:Y:10885111-C-A | ** | |||||||
hg38:Y:10885128-A-ATT | ** | |||||||
hg38:Y:10896428-C-A | ** | |||||||
hg38:Y:10939433-A-G | ** | |||||||
hg38:Y:10940296-C-A | ** | |||||||
hg38:Y:10942001-A-G | ** | |||||||
hg38:Y:10961376-C-A | ** | |||||||
hg38:Y:10971587-C-T | ** | |||||||
hg38:Y:10983501-C-G | ** | |||||||
hg38:Y:10986760-T-G | ** | |||||||
hg38:Y:10990788-CT-C | ** | |||||||
hg38:Y:10995071-C-A | ** | |||||||
hg38:Y:10999141-C-G | ** | |||||||
hg38:Y:11003668-C-A | ** | |||||||
hg38:Y:11018025-C-T | ** | |||||||
hg38:Y:11037878-C-A | ** | |||||||
hg19:Y:13196047-C-A hg38:Y:11040371-C-A | ** | |||||||
hg19:Y:13217799-C-A hg38:Y:11062123-C-A | ** | |||||||
hg19:Y:13237648-G-A hg38:Y:11081972-G-A | ** | |||||||
hg19:Y:13310994-G-T hg38:Y:11155318-G-T | ** | |||||||
hg19:Y:13311031-C-G hg38:Y:11155355-C-G | ** | |||||||
hg19:Y:13328731-C-A hg38:Y:11173055-C-A | ** | |||||||
hg19:Y:13461058-C-T hg38:Y:11305382-C-T | ** | |||||||
hg19:Y:13463643-C-G hg38:Y:11307967-C-G | ** | |||||||
hg19:Y:13477486-T-C hg38:Y:11321810-T-C | ** | |||||||
hg19:Y:13501952-C-A hg38:Y:11346276-C-A | ** | |||||||
hg19:Y:13506630-G-A hg38:Y:11350954-G-A | ** | |||||||
hg19:Y:13705413-A-G hg38:Y:11549737-A-G | DYZ17 | ** | ||||||
hg38:Y:11643363-G-A | DYZ17 | ** | ||||||
hg38:Y:11644267-G-T | FT449753 | DYZ17 | ** | |||||
hg38:Y:11650875-C-T | DYZ17 | ** | ||||||
hg38:Y:11662217-A-G | DYZ17 | ** | ||||||
hg38:Y:11666186-A-T | DYZ17 | ** | ||||||
hg38:Y:11666676-A-T | DYZ17 | ** | ||||||
hg19:Y:13866108-T-C hg38:Y:11745402-T-C | DYZ17 | ** | ||||||
hg19:Y:13884256-C-A hg38:Y:11763550-C-A | FT96318 | ** | ||||||
hg19:Y:13920867-A-G hg38:Y:11800161-A-G | ** | |||||||
hg19:Y:14052949-C-T hg38:Y:11932243-C-T | ** | |||||||
hg19:Y:14073278-T-A hg38:Y:11952572-T-A | ** | |||||||
hg19:Y:14074129-C-A hg38:Y:11953423-C-A | ** | |||||||
hg19:Y:14093581-C-A hg38:Y:11972875-C-A | ** | |||||||
hg19:Y:14100350-T-G hg38:Y:11979644-T-G | ** | |||||||
hg19:Y:14107667-G-A hg38:Y:11986961-G-A | ** | |||||||
hg19:Y:14128315-T-C hg38:Y:12007609-T-C | ** | |||||||
hg19:Y:14201943-C-A hg38:Y:12081237-C-A | ** | |||||||
hg19:Y:14218678-G-T hg38:Y:12097972-G-T | ** | |||||||
hg19:Y:14361823-G-A hg38:Y:12241118-G-A | ** | |||||||
hg19:Y:14367891-AG-A hg38:Y:12247187-AG-A | ** | |||||||
hg19:Y:14387722-C-A hg38:Y:12267018-C-A | ** | |||||||
hg19:Y:14396520-C-A hg38:Y:12275816-C-A | ** | |||||||
hg19:Y:14422336-C-A hg38:Y:12301611-C-A | Y91393 | ** | ||||||
hg19:Y:14431477-C-A hg38:Y:12310750-C-A | ** | |||||||
hg19:Y:14445556-T-C hg38:Y:12324829-T-C | ** | |||||||
hg19:Y:14490524-T-C hg38:Y:12369793-T-C | ** | |||||||
hg19:Y:14490570-C-A hg38:Y:12369839-C-A | ** | |||||||
hg19:Y:14499642-G-T hg38:Y:12387847-G-T | ** | |||||||
hg19:Y:14502474-C-A hg38:Y:12390679-C-A | ** | |||||||
hg19:Y:14506905-C-A hg38:Y:12395110-C-A | ** | |||||||
hg19:Y:14512515-T-C hg38:Y:12400720-T-C | ** | |||||||
hg19:Y:14574801-G-A hg38:Y:12463001-G-A | ** | |||||||
hg19:Y:14581016-T-A hg38:Y:12469216-T-A | ** | |||||||
hg19:Y:14683688-T-C hg38:Y:12571754-T-C | ** | |||||||
hg19:Y:14720012-G-T hg38:Y:12608080-G-T | ** | |||||||
hg19:Y:14721735-AAAAT-A hg38:Y:12609803-AAAAT-A | 6×AAAT | ** | ||||||
hg19:Y:14986075-C-T hg38:Y:12874143-C-T | ** | |||||||
hg19:Y:15012657-A-G hg38:Y:12900745-A-G | ** | |||||||
hg19:Y:15109321-C-A hg38:Y:12997408-C-A | ** | |||||||
hg19:Y:15115468-C-A hg38:Y:13003555-C-A | ** | |||||||
hg19:Y:15131678-T-G hg38:Y:13019765-T-G | ** | |||||||
hg19:Y:15143567-T-G hg38:Y:13031654-T-G | ** | |||||||
hg19:Y:15179350-C-A hg38:Y:13067436-C-A | ** | |||||||
hg19:Y:15280324-CCACCCTGACTCATTCTGATTACATACT-C hg38:Y:13168423-CCACCCTGACTCATTCTGATTACATACT-C | ** | |||||||
hg19:Y:15366134-G-T hg38:Y:13254254-G-T | ** | |||||||
hg19:Y:15386547-C-A hg38:Y:13274667-C-A | ** | |||||||
hg19:Y:15400070-A-G hg38:Y:13288190-A-G | ** | |||||||
hg19:Y:15475314-C-A hg38:Y:13363434-C-A | ** | |||||||
hg19:Y:15647847-T-G hg38:Y:13535967-T-G | ** | |||||||
hg19:Y:15700493-C-A hg38:Y:13588613-C-A | ** | |||||||
hg19:Y:15740481-C-A hg38:Y:13628601-C-A | ** | |||||||
hg19:Y:15918626-T-C hg38:Y:13806746-T-C | ** | |||||||
hg19:Y:15971663-C-A hg38:Y:13859783-C-A | ** | |||||||
hg19:Y:16056902-C-G hg38:Y:13945022-C-G | ** | |||||||
hg19:Y:16090292-C-A hg38:Y:13978412-C-A | ** | |||||||
hg19:Y:16181140-AC-A hg38:Y:14069260-AC-A | ** | |||||||
hg19:Y:16181183-G-A hg38:Y:14069303-G-A | ** | |||||||
hg19:Y:16232411-C-A hg38:Y:14120531-C-A | ** | |||||||
hg19:Y:16309312-C-A hg38:Y:14197432-C-A | ** | |||||||
hg19:Y:16533714-T-C hg38:Y:14421834-T-C | ** | |||||||
hg19:Y:16539578-C-A hg38:Y:14427698-C-A | ** | |||||||
hg19:Y:16635997-C-A hg38:Y:14524117-C-A | ** | |||||||
hg19:Y:16653100-C-A hg38:Y:14541220-C-A | ** | |||||||
hg19:Y:16700205-C-A hg38:Y:14588325-C-A | ** | |||||||
hg19:Y:16727612-G-T hg38:Y:14615732-G-T | ** | |||||||
hg19:Y:17222730-C-A hg38:Y:15110850-C-A | ** | |||||||
hg19:Y:17228973-T-A hg38:Y:15117093-T-A | ** | |||||||
hg19:Y:17244509-G-A hg38:Y:15132629-G-A | ** | |||||||
hg19:Y:17343020-G-C hg38:Y:15231140-G-C | ** | |||||||
hg19:Y:17367554-C-A hg38:Y:15255674-C-A | ** | |||||||
hg19:Y:17446804-G-TT hg38:Y:15334924-G-TT | ** | |||||||
hg19:Y:17466626-G-A hg38:Y:15354746-G-A | ** | |||||||
hg19:Y:17490165-G-A hg38:Y:15378285-G-A | ** | |||||||
hg19:Y:17543882-A-T hg38:Y:15432002-A-T | ** | |||||||
hg19:Y:17544759-C-A hg38:Y:15432879-C-A | ** | |||||||
hg19:Y:17545562-G-A hg38:Y:15433682-G-A | ** | |||||||
hg19:Y:17569241-A-G hg38:Y:15457361-A-G | ** | |||||||
hg19:Y:18080376-C-A hg38:Y:15968496-C-A | ** | |||||||
hg19:Y:18406973-T-A hg38:Y:16295093-T-A | P6_Gap | ** | ||||||
hg19:Y:18539302-C-T hg38:Y:16427422-C-T | ** | |||||||
hg19:Y:18630026-T-G hg38:Y:16518146-T-G | ** | |||||||
hg19:Y:18701749-C-A hg38:Y:16589869-C-A | ** | |||||||
hg19:Y:18779401-C-A hg38:Y:16667521-C-A | ** | |||||||
hg19:Y:18845689-G-A hg38:Y:16733809-G-A | ** | |||||||
hg19:Y:18845933-A-C hg38:Y:16734053-A-C | ** | |||||||
hg19:Y:18902169-GA-G hg38:Y:16790289-GA-G | 8×A | ** | ||||||
hg19:Y:18956166-C-A hg38:Y:16844286-C-A | ** | |||||||
hg19:Y:18964026-C-A hg38:Y:16852146-C-A | ** | |||||||
hg19:Y:19052218-C-A hg38:Y:16940338-C-A | ** | |||||||
hg19:Y:19200986-C-A hg38:Y:17089106-C-A | ** | |||||||
hg19:Y:19330615-T-G hg38:Y:17218735-T-G | ** | |||||||
hg19:Y:19435340-G-T hg38:Y:17323460-G-T | ** | |||||||
hg19:Y:19464156-C-A hg38:Y:17352276-C-A | ** | |||||||
hg19:Y:19750676-G-T hg38:Y:17638796-G-T | P5_Prx | ** | ||||||
hg19:Y:19750694-A-C hg38:Y:17638814-A-C | P5_Prx | ** | ||||||
hg19:Y:20358933-G-T hg38:Y:18197047-G-T | P5_Dst | ** | ||||||
hg19:Y:20668434-T-C hg38:Y:18506548-T-C | P4_Prx | ** | ||||||
hg19:Y:20668511-G-T hg38:Y:18506625-G-T | P4_Prx | ** | ||||||
hg19:Y:20668562-G-C hg38:Y:18506676-G-C | P4_Prx | ** | ||||||
hg19:Y:20751966-T-A hg38:Y:18590080-T-A | P4_Prx | ** | ||||||
hg19:Y:20751983-A-C hg38:Y:18590097-A-C | P4_Prx | ** | ||||||
hg19:Y:20840827-C-A hg38:Y:18678941-C-A | P4_Gap | ** | ||||||
hg19:Y:21073312-A-G hg38:Y:18911426-A-G | ** | |||||||
hg19:Y:21266817-C-A hg38:Y:19104931-C-A | ** | |||||||
hg19:Y:21325689-G-A hg38:Y:19163803-G-A | ** | |||||||
hg19:Y:21457505-G-A hg38:Y:19295619-G-A | ** | |||||||
hg19:Y:21503122-T-G hg38:Y:19341236-T-G | ** | |||||||
hg19:Y:21543269-C-A hg38:Y:19381383-C-A | ** | |||||||
hg19:Y:21584647-A-T hg38:Y:19422761-A-T | ** | |||||||
hg19:Y:21796268-A-T hg38:Y:19634382-A-T | ** | |||||||
hg19:Y:21919404-CTTTT-C hg38:Y:19757518-CTTTT-C | 16×T | ** | ||||||
hg19:Y:21919675-G-T hg38:Y:19757789-G-T | ** | |||||||
hg19:Y:21990959-G-C hg38:Y:19829073-G-C | ** | |||||||
hg19:Y:22011994-G-A hg38:Y:19850108-G-A | ** | |||||||
hg19:Y:22075901-G-A hg38:Y:19914015-G-A | FT109411 | ** | ||||||
hg19:Y:22135590-G-A hg38:Y:19973704-G-A | FTA51142 | ** | ||||||
hg19:Y:22176240-C-A hg38:Y:20014354-C-A | ** | |||||||
hg19:Y:22188753-A-C hg38:Y:20026867-A-C | ** | |||||||
hg19:Y:22203896-A-T hg38:Y:20042010-A-T | Y108691 | ** | ||||||
hg19:Y:22218866-T-C hg38:Y:20056980-T-C | DYZ19 | ** | ||||||
hg19:Y:22515313-A-T hg38:Y:20353427-A-T | ** | |||||||
hg19:Y:22536748-T-A hg38:Y:20374862-T-A | ** | |||||||
hg19:Y:22564826-T-A hg38:Y:20402940-T-A | ** | |||||||
hg19:Y:22730447-CA-C hg38:Y:20568561-CA-C | ** | |||||||
hg19:Y:22857473-C-A hg38:Y:20695587-C-A | ** | |||||||
hg19:Y:22916737-G-C hg38:Y:20754851-G-C | ** | |||||||
hg19:Y:22997700-T-C hg38:Y:20835814-T-C | ** | |||||||
hg19:Y:23009278-C-CT hg38:Y:20847392-C-CT | 8×T | ** | ||||||
hg19:Y:23093002-GA-G hg38:Y:20931116-GA-G | ** | |||||||
hg19:Y:23096246-A-T hg38:Y:20934360-A-T | ** | |||||||
hg19:Y:23126730-C-A hg38:Y:20964844-C-A | ** | |||||||
hg19:Y:23143114-G-C hg38:Y:20981228-G-C | ** | |||||||
hg19:Y:23185233-C-A hg38:Y:21023347-C-A | ** | |||||||
hg19:Y:23259276-C-A hg38:Y:21097390-C-A | ** | |||||||
hg19:Y:23395897-G-C hg38:Y:21234011-G-C | ** | |||||||
hg19:Y:23446950-C-G hg38:Y:21285064-C-G | ** | |||||||
hg19:Y:23848773-A-G hg38:Y:21686887-A-G | ** | |||||||
hg19:Y:23983442-A-T hg38:Y:21837295-A-T | ** | |||||||
hg19:Y:24249160-A-AG hg38:Y:22103013-A-AG | P3_b1 | ** | ||||||
hg19:Y:24290881-A-G hg38:Y:22144734-A-G | P3_t1 | ** | ||||||
hg19:Y:24351252-T-C hg38:Y:22205105-T-C | P3_t1 | ** | ||||||
hg19:Y:25654559-A-G hg38:Y:23508412-A-G | P1_b3 | ** | ||||||
hg19:Y:26059199-C-A hg38:Y:23913052-C-A | P1_Y1 | ** | ||||||
hg19:Y:26098107-A-G hg38:Y:23951960-A-G | P1_Y1 | ** | ||||||
hg19:Y:26118001-A-C hg38:Y:23971854-A-C | P1_Y1 | ** | ||||||
hg19:Y:26285015-G-T hg38:Y:24138868-G-T | P1_Y1 | ** | ||||||
hg19:Y:26699368-C-A hg38:Y:24553221-C-A | P1_g2 | ** | ||||||
hg19:Y:27423409-T-C hg38:Y:25277262-T-C | P1_g3 | ** | ||||||
hg19:Y:27596031-T-G hg38:Y:25449884-T-G | P1_Y2 | ** | ||||||
hg19:Y:27861542-C-A hg38:Y:25715395-C-A | P1_Y2 | ** | ||||||
hg19:Y:27981746-T-TC hg38:Y:25835599-T-TC | P1_Y2 | ** | ||||||
hg19:Y:28017735-C-A hg38:Y:25871588-C-A | P1_Y2 | ** | ||||||
hg19:Y:28464022-C-G hg38:Y:26317875-C-G | ** | |||||||
hg19:Y:28484450-C-A hg38:Y:26338303-C-A | ** | |||||||
hg19:Y:28498448-G-T hg38:Y:26352301-G-T | ** | |||||||
hg19:Y:28498469-T-A hg38:Y:26352322-T-A | ** | |||||||
hg19:Y:28516735-T-A hg38:Y:26370588-T-A | ** | |||||||
hg19:Y:28536084-C-A hg38:Y:26389937-C-A | ** | |||||||
hg19:Y:28614824-C-A hg38:Y:26468677-C-A | ** | |||||||
hg19:Y:28627175-T-C hg38:Y:26481028-T-C | ** | |||||||
hg19:Y:28634641-T-C hg38:Y:26488494-T-C | ** | |||||||
hg19:Y:28660687-T-A hg38:Y:26514540-T-A | ** | |||||||
hg19:Y:28688537-G-C hg38:Y:26542390-G-C | ** | |||||||
hg19:Y:28725961-T-G hg38:Y:26579814-T-G | ** | |||||||
hg19:Y:28775277-C-G hg38:Y:26629130-C-G | ** | |||||||
hg19:Y:28777109-T-C hg38:Y:26630962-T-C | ** | |||||||
hg38:Y:56833198-C-A | ** | |||||||
hg38:Y:56836592-C-A | ** | |||||||
hg38:Y:56843984-T-G | ** | |||||||
hg38:Y:56843986-T-G | ** | |||||||
hg38:Y:56846214-C-A | ** | |||||||
hg38:Y:56862019-G-T | ** | |||||||
hg19:Y:27127661-C-T hg38:Y:24981514-C-T | P1_g3 | *** | ||||||
hg19:Y:5426389-TC-T,TT hg38:Y:5558348-TC-T,TT | *** | |||||||
hg19:Y:27127602-A-ATTTC hg38:Y:24981455-A-ATTTC | P1_g3 | 14×TTTC | *** | |||||
hg19:Y:19124920-CTTT-C hg38:Y:17013040-CTTT-C | 15×T | *** | ||||||
hg19:Y:9981739-A-T hg38:Y:10144130-A-T | *** | |||||||
hg19:Y:13742926-G-A hg38:Y:11587250-G-A | DYZ17 | *** | ||||||
hg19:Y:22243368-T-A hg38:Y:20081482-T-A | DYZ19 | *** | ||||||
hg19:Y:22357901-C-A hg38:Y:20196015-C-A | DYZ19 | *** | ||||||
hg19:Y:22359989-A-C hg38:Y:20198103-A-C | DYZ19 | *** | ||||||
hg19:Y:22361241-A-C hg38:Y:20199355-A-C | DYZ19 | *** | ||||||
hg38:Y:56685555-G-A | *** | |||||||
hg38:Y:10682494-C-T | *** | |||||||
hg38:Y:56833459-A-ATTCCA,ATTCCT | *** | |||||||
hg38:Y:10935530-T-TTGACTCCACC | *** | |||||||
hg19:Y:8575996-T-G hg38:Y:8707955-T-G | *** | |||||||
hg19:Y:2651303-CAAA-C,CA hg38:Y:2783262-CAAA-C,CA | 16×A | *** | ||||||
hg19:Y:2791440-C-T hg38:Y:2923399-C-T | *** | |||||||
hg19:Y:5214336-T-C hg38:Y:5346295-T-C | *** | |||||||
hg19:Y:5742838-A-T hg38:Y:5874797-A-T | *** | |||||||
hg19:Y:6774348-C-A hg38:Y:6906307-C-A | *** | |||||||
hg19:Y:7436170-C-A hg38:Y:7568129-C-A | *** | |||||||
hg19:Y:7991099-C-T hg38:Y:8123058-C-T | *** | |||||||
hg38:Y:10664858-A-G | *** | |||||||
hg38:Y:10751046-T-C | *** | |||||||
hg38:Y:10761323-C-A | *** | |||||||
hg38:Y:10916189-GGTGAT-G | *** | |||||||
hg38:Y:10965664-G-T | *** | |||||||
hg19:Y:13456961-C-A hg38:Y:11301285-C-A | *** | |||||||
hg19:Y:13966773-C-A hg38:Y:11846067-C-A | *** | |||||||
hg19:Y:14006548-C-A hg38:Y:11885842-C-A | *** | |||||||
hg19:Y:14600839-A-T hg38:Y:12489041-A-T | *** | |||||||
hg19:Y:14771649-CTTTTT-C,CTT hg38:Y:12659718-CTTTTT-C,CTT | 17×T | *** | ||||||
hg38:Y:13203566-CAA-C,CAAA | 19×A | *** | ||||||
hg19:Y:15612143-CATAT-C hg38:Y:13500263-CATAT-C | *** | |||||||
hg19:Y:15904149-CAA-C,CAAA hg38:Y:13792269-CAA-C,CAAA | 20×A | *** | ||||||
hg19:Y:17175290-C-A hg38:Y:15063410-C-A | *** | |||||||
hg19:Y:17503874-G-T hg38:Y:15391994-G-T | *** | |||||||
hg19:Y:17821825-GA-G,GAA hg38:Y:15709945-GA-G,GAA | 17×A | *** | ||||||
hg19:Y:17860688-C-A hg38:Y:15748808-C-A | *** | |||||||
hg19:Y:18094349-G-T hg38:Y:15982469-G-T | *** | |||||||
hg19:Y:18191255-C-A hg38:Y:16079375-C-A | *** | |||||||
hg19:Y:21244239-C-A hg38:Y:19082353-C-A | *** | |||||||
hg19:Y:22122335-G-A hg38:Y:19960449-G-A | *** | |||||||
hg19:Y:23768629-A-T hg38:Y:21606743-A-T | *** | |||||||
hg19:Y:27637238-A-C hg38:Y:25491091-A-C | P1_Y2 | *** | ||||||
hg38:Y:56830304-A-C | *** | |||||||
hg38:Y:56832102-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 172840 | 10789547 | 7818593 | 7902965 |
Kit: 172840 | 9810170 | 7977499 | 7871986 |
Used in age calculations | 10789547 | 7977499 | 7902965 |
Counts of SNPs | 7 | 4 |
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