Ferguson

FGC: PGUQT, FTDNA: 271654
MDKA Birth: Ireland 1835

Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > S971 > Z16267 > FGC33371 > FGC33397

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
PGUQT
22741721-C-T 20579835-C-T FGC33406 A7081 YY+
24414492-A-G 22268345-A-G FGC33411 Y+
21436370-C-T 19274484-C-T FGC33401 YY+
21175333-A-G 19013447-A-G FGC33400 YY+
28655416-G-A 26509269-G-A FGC33414 +
3321636-C-A 3453595-C-A FGC33369 +
7849775-A-G 7981734-A-G FGC33374 YY+
8076330-C-A 8208289-C-A FGC33377 YY+
8856710-A-C 8988669-A-C FGC33380 YY+
9412946-G-A 9575337-G-A FGC33383 Y+
9427815-C-T 9590206-C-T FGC33384 Y+
10002044-G-A 10164435-G-A FGC33387 Y+
10074291-G-T 10236682-G-T FGC33388 +
17216429-A-G 15104549-A-G FGC33394 YY+
16027033-G-A 13915153-G-A FGC33392 Y+
6103135-C-T 6235094-C-T FGC9603 +
13210017-G-A 11054341-G-A FGC33389 +
9674266-C-T 9836657-C-T FGC33385 IR3_Prx *
13732134-G-A 11576458-G-A FGC33390 *
24941052-C-T 22794905-C-T FGC33412 g1 *
13206784-CAAAA-C 11051108-CAAAA-C 14×A**
22271801-G-A 20109915-G-A BY20238 DYZ19 **
13424026-C-T 11268350-C-T **
22478105-G-C 20316219-G-C 7660157-C-A 6737738-G-ABY24620 DYZ19 **
22360164-C-CCCCT 20198278-C-CCCCT DYZ19 **
13501486-TA-T 11345810-TA-T 9×A**
22271800-A-T 20109914-A-T BY20237 DYZ19 **
13419289-T-C 11263613-T-C **
22271802-T-C 20109916-T-C BY20239 FGC62404 DYZ19 **
22476821-G-T 20314935-G-T BY53158 DYZ19 **
22271624-T-A 20109738-T-A DYZ19 **
22271819-C-T 20109933-C-T BY52288 DYZ19 **
22271826-T-G 20109940-T-G BY20241 DYZ19 **
7325053-G-GTA 7457012-G-GTA **
28336668-C-CAAAAA 26190521-C-CAAAAA P1_b4 31×A**
22271582-A-T 20109696-A-T BY215214 DYZ19 **
19126436-C-CAAAAAAAAAA 17014556-C-CAAAAAAAAAA 25×A**
13292157-TC-T 11136481-TC-T **
22868312-AC-A 20706426-AC-A **
58868436-A-C 56722435-T-G **
27862535-T-TGAGA 25716388-T-TGAGA P1_Y2 22×GA**
20332111-C-CAAA 18170225-C-CAAA P5_Dst 30×A**
22352957-T-G 20191071-T-G DYZ19 **
22271591-T-G 20109705-T-G DYZ19 **
22271598-C-G 20109712-C-G DYZ19 **
9955791-C-T 10118182-C-T **
13424025-C-A 11268349-C-A Z7997 **
14200817-G-A 12080111-G-A Y49145 **
22271623-C-A 20109737-C-A DYZ19 **
22271675-G-A 20109789-G-A DYZ19 ***
22309419-A-G 20147533-A-G DYZ19 ***
22271660-T-G 20109774-T-G DYZ19 ***
22309406-A-G 20147520-A-G DYZ19 ***
22636370-C-T 20474484-C-T ***
22537699-A-G 20375813-A-G ***
22636334-C-T 20474448-C-T ***
22271674-A-T 20109788-A-T DYZ19 ***
22271694-A-G 20109808-A-G DYZ19 ***
22271774-T-A 20109888-T-A BY20235 DYZ19 ***
22271770-G-C 20109884-G-C DYZ19 ***
22271767-G-C 20109881-G-C DYZ19 ***
22271764-G-C 20109878-G-C DYZ19 ***
22271755-C-T 20109869-C-T DYZ19 ***
22271698-T-A 20109812-T-A DYZ19 ***
22361306-G-T 20199420-G-T DYZ19 ***
22325757-T-C 20163871-T-C DYZ19 ***
22499801-A-G 20337915-A-G DYZ19 ***
22361290-C-T 20199404-C-T DYZ19 ***
22361286-C-T 20199400-C-T DYZ19 ***
22360566-C-T 20198680-C-T DYZ19 ***
22361317-C-T 20199431-C-T DYZ19 ***
22360555-G-T 20198669-G-T DYZ19 ***
22365586-A-C 20203700-A-C DYZ19 ***
22420627-C-T 20258741-C-T DYZ19 ***
22356493-G-C 20194607-G-C DYZ19 ***
22354934-G-T 20193048-G-T DYZ19 ***
22450601-G-A 20288715-G-A DYZ19 ***
22343095-G-C 20181209-G-C DYZ19 ***
22343083-T-C 20181197-T-C DYZ19 ***
22337866-A-C 20175980-A-C DYZ19 ***
22491039-C-G 20329153-C-G DYZ19 ***
22337829-A-C 20175943-A-C DYZ19 ***
22329968-C-G 20168082-C-G DYZ19 ***
22337716-C-A 20175830-C-A DYZ19 ***
22337709-T-A 20175823-T-A DYZ19 ***
22337668-A-C 20175782-A-C DYZ19 ***
22251570-A-T 20089684-A-T DYZ19 ***
22337649-G-C 20175763-G-C DYZ19 ***
22337604-C-T 20175718-C-T DYZ19 ***
22337591-T-A 20175705-T-A DYZ19 ***
22337250-C-G 20175364-C-G DYZ19 ***
22330160-G-A 20168274-G-A DYZ19 ***
22361295-T-A 20199409-T-A DYZ19 ***
22330158-G-A 20168272-G-A DYZ19 ***
22515089-A-G 20353203-A-G ***
22330033-G-T 20168147-G-T DYZ19 ***
22329974-G-T 20168088-G-T DYZ19 ***
22257002-G-A 20095116-G-A DYZ19 ***
7126524-C-CT 7258483-C-CT 23×T***
22251556-A-G 20089670-A-G DYZ19 ***
13734601-G-A 11578925-G-A ***
19860891-C-T 17749011-C-T P5_Prx ***
19860888-C-T 17749008-C-T P5_Prx ***
19860882-T-A 17749002-T-A P5_Prx ***
19860881-T-A 17749001-T-A P5_Prx ***
19860873-T-A 17748993-T-A P5_Prx ***
19663556-C-T 17551676-C-T P5_Prx ***
19645282-T-G 17533402-T-G P5_Prx ***
19645272-A-T 17533392-A-T P5_Prx ***
18469086-C-T 16357206-C-T P6_Dst ***
17834984-G-A 15723104-G-A ***
15639566-A-G 13527686-A-G ***
13735006-C-T 11579330-C-T ***
13734740-C-A 11579064-C-A ***
13730223-T-C 11574547-T-C ***
19865407-C-T 17753527-C-T P5_Prx ***
13728561-C-T 11572885-C-T 5×ATGGA***
13719240-G-A 11563564-G-A ***
13714389-T-A 11558713-T-A ***
13710001-T-A 11554325-T-A ***
13698627-A-C 11542951-A-C ***
13698625-C-G 11542949-C-G ***
13698600-A-G 11542924-A-G ***
13698592-T-G 11542916-T-G ***
13698590-A-G 11542914-A-G ***
13698580-C-A 11542904-C-A ***
13478223-T-A 11322547-T-A ***
13462266-C-G 11306590-C-G ***
13462255-G-A 11306579-G-A ***
13398171-T-A 11242495-T-A ***
19861909-A-G 17750029-A-G P5_Prx ***
19865408-G-T 17753528-G-T P5_Prx ***
22234385-C-T 20072499-C-T DYZ19 ***
20393877-G-A 18231991-G-A P5_Dst ***
22226516-G-C 20064630-G-C DYZ19 ***
22223298-C-T 20061412-C-T DYZ19 ***
21773904-C-A 19612018-C-A ***
21773898-C-A 19612012-C-A ***
20417925-C-T 18256039-C-T P5_Dst ***
20417905-T-A 18256019-T-A P5_Dst ***
20417895-C-A 18256009-C-A P5_Dst ***
20394273-G-T 18232387-G-T P5_Dst ***
20394261-G-A 18232375-G-A P5_Dst ***
20394250-T-A 18232364-T-A P5_Dst ***
20394217-G-T 18232331-G-T P5_Dst ***
20393934-T-C 18232048-T-C P5_Dst ***
20393928-G-T 18232042-G-T P5_Dst ***
20393881-C-T 18231995-C-T P5_Dst ***
20393872-C-T 18231986-C-T P5_Dst ***
19865411-C-T 17753531-C-T P5_Prx ***
20368225-G-A 18206339-G-A P5_Dst ***
20309375-G-T 18147489-G-T P5_Dst ***
20309373-A-T 18147487-A-T P5_Dst ***
20309371-A-T 18147485-A-T P5_Dst ***
20309365-A-T 18147479-A-T P5_Dst ***
20309364-A-T 18147478-A-T P5_Dst ***
20309362-A-G 18147476-A-G P5_Dst ***
20309358-C-T 18147472-C-T P5_Dst ***
20309346-G-T 18147460-G-T P5_Dst ***
20309341-A-T 18147455-A-T P5_Dst ***
20309340-G-T 18147454-G-T P5_Dst ***
20309336-G-A 18147450-G-A P5_Dst ***
19937602-A-G 17825722-A-G P5_Prx ***
19865433-A-T 17753553-A-T P5_Prx ***
20393916-G-T 18232030-G-T P5_Dst ***
24316199-A-T 22170052-A-T P3_t1 ***
23415308-G-A 21253422-G-A ***
13470245-TCCCT-CCCCC 11314569-TCCCT-CCCCC ***
13110272-ATTT-GCTG 10599758-ATTT-GCTG ***
13122174-GATG-AATT 10611660-GATG-AATT ***
13122201-AAGG-TATC 10611687-AAGG-TATC ***
13453454-TATTCCATTCCATTCC-T 11297778-TATTCCATTCCATTCC-T 11×ATTCC***
13456019-GATTCCATTCCATTCC-G 11300343-GATTCCATTCCATTCC-G 11×ATTCC***
13462251-TCGTGC-ACGCAA 11306575-TCGTGC-ACGCAA ***
13470345-CACCACA-AACGCCCG 11314669-CACCACA-AACGCCCG ***
13110247-TCTAC-ACTGT 10599733-TCTAC-ACTGT ***
13701956-CTCA-GTTG 11546280-CTCA-GTTG ***
13923533-AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATAT-A 11802827-AAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATAT-A ***
14088196-ATATAG-A 11967490-ATATAG-A ***
14926489-G-AA 12814554-G-AA ***
15799233-CTCTT-TTCTC 13687353-CTCTT-TTCTC 4×TCTT***
18398192-C-CAT 16286312-C-CAT P6_Gap 15×AT***
13110259-GAT-CTG 10599745-GAT-CTG ***
13110234-TCCAC-GCCAT 10599720-TCCAC-GCCAT ***
19034756-CAAAA-C 16922876-CAAAA-C 15×A***
58909022-G-C 56681849-C-G ***
58876479-T-C 56714392-A-G ***
58883184-A-T 56707687-T-A ***
58890041-G-A 56700830-C-T ***
58890139-G-T 56700732-C-A ***
58890773-T-G 56700098-A-C ***
58905333-T-A 56685538-A-T ***
58909131-A-T 56681740-T-A ***
9524019-GTATATATATATATA-G 9686410-GTATATATATATATA-G 21×TA***
58909201-A-C 56681670-T-G ***
58909202-T-C 56681669-A-G ***
19138110-C-CTA 17026230-C-CTA 9×TA***
22920605-C-CTTT 20758719-C-CTTT 25×T***
14667841-C-AAA 12555907-C-AAA ***
5130497-G-GTTTTTTTGGGGTT 5262456-G-GTTTTTTTGGGGTT 24×T***
5784062-C-CAAAAA 5916021-C-CAAAAA 21×A***
18401199-C-CAAAA 16289319-C-CAAAA P6_Gap 30×A***
19293800-G-AA 17181920-G-AA ***
58876402-A-T 56714469-T-A ***
24686428-C-CTTTTTTT 22540281-C-CTTTTTTT P3_b2 23×T***
22420627-CAGA-TACG 20258741-CAGA-TACG DYZ19 ***
22420964-AG-A 20259078-AG-A DYZ19 ***
22421529-TCTT-ACTA 20259643-TCTT-ACTA DYZ19 ***
22421559-CC-AG 20259673-CC-AG DYZ19 ***
24387986-C-CTA 22241839-C-CTA ***
24425338-T-TGCAC 22279191-T-TGCAC ***
24841406-C-CTGTGTG 22695259-C-CTGTGTG IR1_R 23×TG***
22337664-ACTTA-CCTTC 20175778-ACTTA-CCTTC DYZ19 ***
26437169-C-CAAAAAAAA 24291022-C-CAAAAAAAA P1_Y1 28×A***
28545039-G-AA 26398892-G-AA ***
28804479-AAATGAGT-GAGTAGGG 26658332-AAATGAGT-GAGTAGGG ***
58828921-GG-TC 56761949-CC-GA ***
58831537-CTTTCC-GATTCA 56759329-GGAAAG-TGAATC ***
58840466-CATTGGAGTCA-GATTCGATTCG 56750395-TGACTCCAATG-CGAATCGAATC ***
22360405-CGTT-TGTC 20198519-CGTT-TGTC DYZ19 ***
22337649-GC-CA 20175763-GC-CA DYZ19 ***
20025476-T-TCCCC 17913596-T-TCCCC P5_Prx ***
22167224-C-AAA 20005338-C-AAA 29×A***
20025478-T-TCCCCCCC 17913598-T-TCCCCCCC P5_Prx ***
20025482-T-TCCCCCC 17913602-T-TCCCCCC P5_Prx 14×C***
20252796-C-CAAAAAAAAAA 18090910-C-CAAAAAAAAAA P5_Dst 24×A***
21553428-T-TTTTTTTTTTCATTTTA 19391542-T-TTTTTTTTTTCATTTTA ***
21773895-CAAC-AAAA 19612009-CAAC-AAAA ***
21824255-C-CA 19662369-C-CA 30×A***
22232018-ACT-A 20070132-ACT-A DYZ19 ***
22337604-CACA-TACG 20175718-CACA-TACG DYZ19 ***
22236527-AT-A 20074641-AT-A DYZ19 ***
22252886-ACCAGAGTTCCTTA-TTTAGATTGTCTTC 20091000-ACCAGAGTTCCTTA-TTTAGATTGTCTTC DYZ19 ***
22267354-TAGAATTTC-CAGATTTTT 20105468-TAGAATTTC-CAGATTTTT DYZ19 ***
22271623-CT-AA 20109737-CT-AA DYZ19 ***
22271674-AG-TA 20109788-AG-TA DYZ19 ***
22271764-GGTGTTGCTCT-CGTCTTCCTCA 20109878-GGTGTTGCTCT-CGTCTTCCTCA DYZ19 ***
22271800-AGT-TAC 20109914-AGT-TAC DYZ19 ***
58876473-A-T 56714398-T-A ***
58876391-C-A 56714480-G-T ***
23713972-T-A 21552086-T-A ***
26210115-C-T 24063968-C-T P1_Y1 ***
25672038-G-A 23525891-G-A P1_b3 ***
25895223-A-T 23749076-A-T P1_Y1 ***
25895236-C-T 23749089-C-T P1_Y1 ***
26210073-C-T 24063926-C-T P1_Y1 ***
26210096-C-T 24063949-C-T P1_Y1 ***
26210099-T-A 24063952-T-A P1_Y1 ***
26210116-A-G 24063969-A-G P1_Y1 ***
25672023-T-A 23525876-T-A P1_b3 ***
26210135-C-T 24063988-C-T P1_Y1 ***
26210152-G-A 24064005-G-A P1_Y1 ***
26210158-C-A 24064011-C-A P1_Y1 ***
26210184-G-A 24064037-G-A P1_Y1 ***
26210220-G-A 24064073-G-A P1_Y1 ***
26210233-G-T 24064086-G-T P1_Y1 ***
25672025-T-A 23525878-T-A P1_b3 ***
25672019-T-A 23525872-T-A P1_b3 ***
26214320-C-A 24068173-C-A P1_Y1 ***
24316201-A-T 22170054-A-T P3_t1 ***
24241791-A-G 22095644-A-G P3_b1 ***
24316190-C-T 22170043-C-T P3_t1 ***
24316192-C-T 22170045-C-T P3_t1 ***
24316195-A-T 22170048-A-T P3_t1 ***
24316196-C-T 22170049-C-T P3_t1 ***
24316197-A-T 22170050-A-T P3_t1 ***
24316214-A-T 22170067-A-T P3_t1 ***
25626936-C-A 23480789-C-A P1_b3 ***
24333784-G-A 22187637-G-A P3_t1 ***
24333785-T-A 22187638-T-A P3_t1 ***
24333822-T-G 22187675-T-G P3_t1 ***
24333824-T-A 22187677-T-A P3_t1 ***
24333825-C-G 22187678-C-G P3_t1 ***
24333827-C-G 22187680-C-G P3_t1 ***
25384404-T-C 23238257-T-C P2_r2 ***
26210238-C-T 24064091-C-T P1_Y1 ***
26461143-A-C 24314996-A-C P1_Y1 ***
58876383-T-A 56714488-A-T ***
58831526-C-T 56759345-G-A ***
58825114-T-A 56765757-A-T ***
58825116-A-T 56765755-T-A ***
58825130-A-T 56765741-T-A ***
58827246-A-G 56763625-T-C ***
58827737-G-A 56763134-C-T ***
58831517-G-T 56759354-C-A ***
58838809-C-T 56752062-G-A ***
58825108-T-C 56765763-A-G ***
58839736-C-A 56751135-G-T ***
58859196-G-A 56731675-C-T ***
58865813-C-A 56725058-G-T ***
58865815-T-A 56725056-A-T ***
58870002-A-T 56720869-T-A ***
58870572-C-T 56720299-G-A ***
58825112-T-A 56765759-A-T ***
58825090-C-T 56765781-G-A ***
26461231-C-A 24315084-C-A P1_Y1 ***
27525087-A-T 25378940-A-T P1_Y2 ***
26508634-T-A 24362487-T-A P1_Y1 ***
27134043-G-A 24987896-G-A P1_g3 ***
27134052-C-A 24987905-C-A P1_g3 ***
27134067-A-T 24987920-A-T P1_g3 ***
27134082-T-A 24987935-T-A P1_g3 5×AGGA***
27138518-A-T 24992371-A-T P1_g3 ***
27525089-A-T 25378942-A-T P1_Y2 ***
58825088-T-A 56765783-A-T ***
27616410-T-C 25470263-T-C P1_Y2 ***
27676714-G-T 25530567-G-T P1_Y2 ***
27692670-C-G 25546523-C-G P1_Y2 ***
28426188-C-T 26280041-C-T P1_gr2 ***
28426191-G-T 26280044-G-T P1_gr2 ***
28804483-G-A 26658336-G-A ***
28812307-A-G 26666160-A-G ***
13329025-A-G 11173349-A-G FGC40660 ***
13110072-A-T 10599558-A-T ***
13281297-G-C 11125621-G-C ***
22226684-A-G 20064798-A-G DYZ19 ***
22367232-C-A 20205346-C-A DYZ19 ***
22367243-G-A 20205357-G-A DYZ19 ***
13863160-CATGGACG-AATTGACT 11742454-CATGGACG-AATTGACT ***
13863191-GTGA-ACGG 11742485-GTGA-ACGG ***
22236347-GT-G 20074461-GT-G DYZ19 ***
13485030-C-A 11329354-C-A ***
22420840-G-A 20258954-G-A DYZ19 ***
13329069-C-T 11173393-C-T ***
22481762-G-C 20319876-G-C DYZ19 ***
22226691-CAT-AAC 20064805-CAT-AAC DYZ19 ***
58909203-AG-TC 56681667-CT-GA ***
6684237-C-A 6816196-C-A ***
22300958-G-C 20139072-G-C DYZ19 ***
22354889-C-T 20193003-C-T DYZ19 ***
28804496-T-G 26658349-T-G ***
58910219-ATTCCATTCC-A 56680642-TGGAATGGAA-T ***
22421053-A-G 20259167-A-G DYZ19 ***
58867539-T-C 56723332-A-G ***
22420848-A-G 20258962-A-G DYZ19 ***
22420853-T-G 20258967-T-G DYZ19 ***
22420867-T-A 20258981-T-A DYZ19 ***
58831532-G-C 56759339-C-G ***
58864160-C-G 56726711-G-C ***
58867514-T-A 56723357-A-T ***
58867556-C-T 56723315-G-A ***
58857096-GCATTCCACTC-G 56733757-ATGGAATGGAG-A ***
10019077-AAT-GAC 10181468-AAT-GAC ***
13140071-CTCGAGTGCGTGTGAT-C 10629557-CTCGAGTGCGTGTGAT-C ***
22235006-CCTGC-TCTGT 20073120-CCTGC-TCTGT DYZ19 ***
22488535-GAAGCTACC-TAAGTTGCA 20326649-GAAGCTACC-TAAGTTGCA DYZ19 ***
58831498-GTTC-ATTT 56759370-GAAC-AAAT ***
58831551-TCATTC-CGATGA 56759315-GAATGA-TCATCG ***
22420880-A-G 20258994-A-G DYZ19 ***
22421536-C-T 20259650-C-T DYZ19 ***
5786608-C-CAAAAAAAAAAAAAA 5918567-C-CAAAAAAAAAAAAAA 20×A***
22491435-G-T 20329549-G-T DYZ19 ***
13120517-A-T 10610003-A-T ***
13120504-C-T 10609990-C-T ***
7483015-C-T 7614974-C-T IR1_L ***
22234945-G-C 20073059-G-C DYZ19 ***
22234968-G-C 20073082-G-C DYZ19 ***
22491012-G-A 20329126-G-A DYZ19 ***
22491691-G-T 20329805-G-T DYZ19 ***
22273619-G-T 20111733-G-T DYZ19 ***
3174374-C-CTTT 3306333-C-CTTT 18×T***
58867486-TATTTTATTCCATGCC-T 56723365-CAAATGGCATGGAATA-C ***
58868431-C-CACT 56722439-G-GAGT ***
58910216-TC-T 56680652-TG-T ***
13616629-G-A 11460953-G-A ***
22226668-T-C 20064782-T-C DYZ19 ***
13120506-C-A 10609992-C-A ***
13419933-A-G 11264257-A-G FGC23709 ***
58825115-T-C 56765756-A-G ***
22268227-T-C 20106341-T-C DYZ19 ***
58870508-A-AT 56720361-G-GA ***
27151329-G-TTT 25005182-G-TTT P1_g3 ***
58870523-TGA-T 56720345-ATC-A ***
13110184-C-T 10599670-C-T ***
13723610-T-C 11567934-T-C ***
19610119-C-T 17498239-C-T P5_Prx ***
22268228-C-A 20106342-C-A DYZ19 ***
58875241-ATTCCAT-CTGCCAG 56715624-ATGGAAT-CTGGCAG ***
22268229-C-T 20106343-C-T DYZ19 ***
22358841-C-G 20196955-C-G DYZ19 ***
22421538-G-C 20259652-G-C DYZ19 ***
9301402-TA-AG 9463793-TA-AG ***
58840442-CTTCCA-GTTGCATTTT 56750424-TGGAAG-AAAATGCAAC ***
58875205-GAT-CAG 56715664-ATC-CTG ***
22341143-G-T 20179257-G-T DYZ19 ***
58857543-G-A 56733328-C-T ***
22420643-G-T 20258757-G-T DYZ19 ***
13122131-C-T 10611617-C-T ***
13798575-N-A 11677869-A-. ***
22344769-T-A 20182883-T-A DYZ19 ***
13120524-T-A 10610010-T-A ***
13120534-G-A 10610020-G-A ***
13120533-T-A 10610019-T-A ***
13120501-T-G 10609987-T-G ***
13122138-C-G 10611624-C-G ***
28253491-C-CAAAAAA 26107344-C-CAAAAAA P1_b4 32×A***
13122174-G-A 10611660-G-A ***
13129608-C-T 10619094-C-T ***
20367902-A-T 18206016-A-T P5_Dst ***
20367923-A-T 18206037-A-T P5_Dst ***
20367939-T-A 18206053-T-A P5_Dst ***
20367955-G-T 18206069-G-T P5_Dst ***
28804503-CA-GG 26658356-CA-GG ***
22297108-C-CT 20135222-C-CT DYZ19 ***
20368200-A-T 18206314-A-T P5_Dst ***
28804494-A-G 26658347-A-G ***
28804491-A-G 26658344-A-G ***
22232258-C-G 20070372-C-G DYZ19 ***
22297561-G-A 20135675-G-A DYZ19 ***
22361304-G-A 20199418-G-A DYZ19 ***
22271792-C-T 20109906-C-T BY215255 DYZ19 ***
22358764-T-C 20196878-T-C DYZ19 ***
28804503-C-G 26658356-C-G ***
22232242-GAC-TAA 20070356-GAC-TAA DYZ19 ***
22252653-T-C 20090767-T-C DYZ19 ***
22252657-C-G 20090771-C-G DYZ19 ***
22337292-C-G 20175406-C-G DYZ19 ***
22343914-T-A 20182028-T-A DYZ19 ***
22491583-A-G 20329697-A-G DYZ19 ***
58872247-T-A 56718624-A-T ***
20368191-A-T 18206305-A-T P5_Dst ***
20368243-G-C 18206357-G-C P5_Dst ***
58846709-T-C 56744162-A-G ***
13140069-CACTCGAGTGCGTGTG-C 10629555-CACTCGAGTGCGTGTG-C ***
22337235-G-A 20175349-G-A DYZ19 ***
22365813-C-G 20203927-C-G DYZ19 ***
58829070-C-A 56761801-G-T ***
22235306-AT-A 20073420-AT-A DYZ19 ***
22337314-G-C 20175428-G-C DYZ19 ***
22435826-C-T 20273940-C-T DYZ19 ***
22263779-G-A 20101893-G-A DYZ19 ***
22309296-G-T 20147410-G-T DYZ19 ***
13475916-A-G 11320240-A-G ***
22360154-G-T 20198268-G-T DYZ19 ***
13110472-G-T 10599958-G-T ***
13110501-A-T 10599987-A-T ***
27060085-C-T 24913938-C-T P1_r4 33×T***
58841350-G-A 56749521-C-T ***
22337234-G-A 20175348-G-A DYZ19 ***
22268217-T-A 20106331-T-A DYZ19 ***
22226503-G-T 20064617-G-T DYZ19 ***
13120472-TG-AC 10609958-TG-AC ***
22357694-C-A 20195808-C-A DYZ19 ***
27519052-A-T 25372905-A-T P1_Y2 ***
58879381-A-T 56711490-T-A ***
58909130-T-C 56681741-A-G ***
22360154-GGGTTTCTGT-TTGTGTCCTC 20198268-GGGTTTCTGT-TTGTGTCCTC DYZ19 ***
22281896-TCT-GTC 20120010-TCT-GTC DYZ19 ***
13483918-GTGA-CTGT 11328242-GTGA-CTGT ***
13485060-T-G 11329384-T-G ***
28804491-ATGAAT-GTGGAG 26658344-ATGAAT-GTGGAG ***
26180133-T-G 24033986-T-G P1_Y1 ***
13485065-A-G 11329389-A-G ***
22337643-A-C 20175757-A-C DYZ19 ***
22309354-T-C 20147468-T-C DYZ19 ***
13485078-C-T 11329402-C-T ***
58913232-TGATG-GAATT 56677635-CATCA-AATTC ***
22420655-T-G 20258769-T-G DYZ19 ***
13120226-A-T 10609712-A-T ***
27454805-A-G 25308658-A-G P1_Y2 ***
13328984-C-T 11173308-C-T ***
58834587-C-A 56756284-G-T ***
22337299-G-T 20175413-G-T DYZ19 ***
22352874-C-T 20190988-C-T DYZ19 ***
22252650-C-A 20090764-C-A DYZ19 ***
13472643-C-T 11316967-C-T FGC19510 ***
22360091-C-A 20198205-C-A DYZ19 ***
22337320-TTT-GTG 20175434-TTT-GTG DYZ19 ***
3016965-A-T 3148924-A-T ***
3056182-G-T 3188141-G-T ***
3299612-A-G 3431571-A-G ***
4144954-G-A 4276913-G-A ***
4650513-A-G 4782472-A-G ***
5044110-A-G 5176069-A-G ***
22257072-G-C 20095186-G-C DYZ19 ***
20025431-TC-CT 17913551-TC-CT P5_Prx ***
5871837-T-C 6003796-T-C ***
13723630-T-C 11567954-T-C ***
58879434-GATTCCATTGCATTCC-G 56711413-GAATGGAATGGAATGC-G ***
58907521-G-A 56683350-C-T ***
13110224-A-T 10599710-A-T ***
13723636-A-G 11567960-A-G ***
19012820-T-G 16900940-T-G ***
9227144-G-C 9389535-G-C ***
58909171-A-T 56681700-T-A ***
22421573-G-T 20259687-G-T DYZ19 ***
22267339-T-C 20105453-T-C DYZ19 ***
22420877-A-G 20258991-A-G DYZ19 ***
58870680-T-G 56720191-A-C ***
22326891-G-A 20165005-G-A DYZ19 ***
22337320-T-G 20175434-T-G DYZ19 ***
22421559-C-A 20259673-C-A DYZ19 ***
5050575-C-T 5182534-C-T ***
5871841-A-C 6003800-A-C ***
27519006-CAATAAAAAATTATAAAGGGGATA-GAGTGATAATTTTTTAACTAAAT 25372859-CAATAAAAAATTATAAAGGGGATA-GAGTGATAATTTTTTAACTAAAT P1_Y2 ***
13110194-T-G 10599680-T-G ***
13109953-C-G 10599439-C-G ***
13109956-T-A 10599442-T-A ***
13110060-A-C 10599546-A-C ***
13470297-T-C 11314621-T-C ***
13110078-T-A 10599564-T-A ***
13110171-T-G 10599657-T-G ***
13110234-T-G 10599720-T-G ***
13109935-A-T 10599421-A-T ***
13110238-C-T 10599724-C-T ***
13110266-A-C 10599752-A-C ***
13110958-A-T 10600444-A-T ***
13114627-T-C 10604113-T-C ***
13120204-G-A 10609690-G-A ***
13120215-C-T 10609701-C-T ***
13109943-A-G 10599429-A-G ***
13109932-T-A 10599418-T-A ***
6133620-A-C 6265579-A-C ***
9804915-G-A 9967306-G-A ***
6269786-A-T 6401745-A-T IR3_Dst ***
6269802-T-A 6401761-T-A IR3_Dst ***
6269803-A-G 6401762-A-G IR3_Dst ***
9239201-A-T 9401592-A-T ***
9342737-C-A 9505128-C-A ***
9367817-G-A 9530208-G-A ***
10019089-A-T 10181480-A-T ***
13109927-A-T 10599413-A-T ***
10090299-G-A 10252690-G-A ***
10090322-G-T 10252713-G-T ***
10090656-G-A 10253047-G-A ***
10090664-G-T 10253055-G-T ***
10091158-A-T 10253549-A-T ***
10091163-G-T 10253554-G-T ***
27519033-CCACCGATCCCAC-TTGCCTTT 25372886-CCACCGATCCCAC-TTGCCTTT P1_Y2 ***
17994850-TC-AA 15882970-TC-AA P7_Prx ***
22420672-G-C 20258786-G-C DYZ19 ***
58906323-CTTGCCAGTTTTC-TATTCCA 56684536-GAAAACTGGCAAG-TGGAATA ***
22330181-C-T 20168295-C-T DYZ19 ***
22244926-GA-G 20083040-GA-G DYZ19 ***
3878644-C-CAAA 4010603-C-CAAA 15×A***
13110187-A-G 10599673-A-G ***
13110176-G-C 10599662-G-C ***
27060079-C-T 24913932-C-T P1_r4 ***
58906340-ATTTT-GTTCG 56684527-AAAAT-CGAAC ***
4778194-G-A 4910153-G-A ***
13120236-C-T 10609722-C-T ***
22480722-C-A 20318836-C-A DYZ19 ***
22244984-TA-GC 20083098-TA-GC DYZ19 ***
22421463-AC-GT 20259577-AC-GT DYZ19 ***
22289747-C-A 20127861-C-A DYZ19 ***
22343907-C-A 20182021-C-A DYZ19 ***
13129674-TA-CT 10619160-TA-CT ***
59013617-TATA-AATG 56867470-TATA-AATG ***
22457192-G-A 20295306-G-A DYZ19 ***
58831509-T-C 56759362-A-G ***
22420691-G-C 20258805-G-C DYZ19 ***
22420710-G-C 20258824-G-C DYZ19 ***
58913269-A-G 56677602-T-C ***
58870564-T-TG 56720306-T-TC ***
58889913-C-T 56700958-G-A ***
28804504-A-G 26658357-A-G ***
58877030-A-C 56713841-T-G ***
22504825-ATTTTAG-TGTTAT 20342939-ATTTTAG-TGTTAT DYZ19 ***
58906355-G-T 56684516-C-A ***
58907350-C-T 56683521-G-A ***
22495773-TC-CTT 20333887-TC-CTT DYZ19 ***
22341824-A-T 20179938-A-T DYZ19 ***
22337664-A-C 20175778-A-C DYZ19 ***
4167676-G-AA 4299635-G-AA ***
22491031-T-G 20329145-T-G DYZ19 ***
58909114-T-C 56681757-A-G ***
58843242-T-G 56747629-A-C ***
9940167-T-C 10102558-T-C ***
9301403-A-G 9463794-A-G ***
22365607-A-C 20203721-A-C DYZ19 ***
22480723-C-A 20318837-C-A DYZ19 ***
27060081-A-T 24913934-A-T P1_r4 ***
22337314-GTT-CTTA 20175428-GTT-CTTA DYZ19 ***
4539036-A-G 4670995-A-G ***
9940177-C-T 10102568-C-T ***
22241295-C-A 20079409-C-A DYZ19 ***
13503524-T-TAC 11347848-T-TAC ***
13328986-T-C 11173310-T-C ***
13122131-CT-TG 10611617-CT-TG ***
13702191-GTG-CTC 11546515-GTG-CTC ***
22360576-G-T 20198690-G-T DYZ19 ***
22503307-G-T 20341421-G-T DYZ19 ***
9301402-T-A 9463793-T-A ***
58838996-CTTCCATTG-TTTCCATTC 56751867-CAATGGAAG-GAATGGAAA ***
58909120-G-C 56681751-C-G ***
22502775-C-A 20340889-C-A DYZ19 ***
58909122-C-T 56681749-G-A ***
58870547-CATTG-GT 56720320-CAATG-AC ***
24552097-C-T 22405950-C-T P3_t2 ***
13110965-T-A 10600451-T-A ***
58889896-C-T 56700975-G-A ***
22267326-G-A 20105440-G-A DYZ19 ***
22267373-AAGT-CATG 20105487-AAGT-CATG DYZ19 ***
22366591-T-G 20204705-T-G DYZ19 ***
58870530-TTCCTTTCCA-T 56720328-TGGATGGAAA-T ***
22337607-A-G 20175721-A-G DYZ19 ***
22341492-A-C 20179606-A-C DYZ19 ***
22420856-T-A 20258970-T-A DYZ19 ***
22365980-GG-TA 20204094-GG-TA DYZ19 ***
22421067-CT-GTG 20259181-CT-GTG DYZ19 ***
5905918-G-AA 6037877-G-AA ***
58844028-T-TCGATTCCTG 56746842-A-ACAGGAATCG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
DF21/S1921324141111-14121212131329179-1011112515192915-15-17-17111119-231615181836-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Ferguson1323141111-15121211121329179-1011112516192915-15-17-18111119-231615191637-39141311915-1681010810101223-24171012131381221211312111410111212

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: PGUQT*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs118
Variant counts last updated 2020-02-01 03:06:19.

* BED data not available. Using default values.

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