Black

FTDNA: 242907, BigY3: 242907, BigY2: 242907

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF63/S522 > CTS6919 > A92 > Z16506 > FGC17164 > ZZ90

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
242907		BigY3
242907		BigY2
242907
19746077-G-GTATC 17634197-G-GTATC P5_Prx 5×TATCA*
13449585-T-C 11293909-T-C A*
56833626-T-G A*
21606777-G-A 19444891-G-A BY134123 YY+++
13452507-G-GACTTC 11296831-G-GACTTC *
56822403-T-G *
9916992-C-T 10079383-C-T PF4248 **
8901074-C-T 9033033-C-T FT89929 **
18928753-GA-G 16816873-GA-G 9×A**
6722124-T-G 6854083-T-G K451 **
6722126-A-T 6854085-A-T **
16181404-T-A 14069524-T-A ****
3051306-C-A 3183265-C-A Z9913 **
58985560-G-A 56839413-G-A **
6978348-C-A 7110307-C-A **
23200854-A-G 21038968-A-G **
10987761-T-G **
21464513-C-A 19302627-C-A **
13258459-C-A 11102783-C-A **
14246721-C-A 12126015-C-A **
13942341-C-A 11821635-C-A **
23603174-C-A 21441288-C-A **
10812525-G-T **
14000532-C-A 11879826-C-A **
13234993-T-A 11079317-T-A **
56829892-C-A **
28679683-C-A 26533536-C-A **
27398546-G-A 25252399-G-A P1_g3 **
10926715-T-G **
4282177-C-A 4414136-C-A **
10673943-C-T **
10816144-A-G **
10816160-A-T **
10816165-G-T **
5219315-C-A 5351274-C-A **
4918382-C-A 5050341-C-A **
16412567-C-A 14300687-C-A **
17547809-C-A 15435929-C-A **
3492685-C-A 3624644-C-A **
10924502-G-C **
14585820-G-T 12474020-G-T **
10747038-C-T FT429408 **
24353293-T-C 22207146-T-C P3_t1 **
7613828-C-A 7745787-C-A **
14236008-C-A 12115302-C-A **
3536238-C-A 3668197-C-A **
14174924-C-A 12054218-C-A **
10790188-C-A **
20751839-T-TG 18589953-T-TG P4_Prx **
24577875-ATGC-A 22431728-ATGC-A P3_t2 **
28688429-C-A 26542282-C-A **
13961474-C-A 11840768-C-A **
3467239-C-A 3599198-C-A **
23198150-C-T 21036264-C-T **
3250694-C-A 3382653-C-A **
16170307-T-C 14058427-T-C **
3427067-G-T 3559026-G-T **
27596066-G-A 25449919-G-A P1_Y2 **
13394972-C-A 11239296-C-A **
27801226-A-AG 25655079-A-AG P1_Y2 **
10926712-C-A **
2683399-C-A 2815358-C-A **
2697541-G-T 2829500-G-T **
2729825-T-C 2861784-T-C **
2744897-G-T 2876856-G-T FT32970 **
3081812-CAA-C 3213771-CAA-C 33×A**
3093247-C-A 3225206-C-A **
3123380-C-A 3255339-C-A **
3165097-G-T 3297056-G-T **
3274227-C-A 3406186-C-A **
3310651-T-A 3442610-T-A **
3346845-G-T 3478804-G-T **
3429195-C-A 3561154-C-A **
3467451-T-A 3599410-T-A **
3467618-C-A 3599577-C-A **
3487275-C-A 3619234-C-A **
3502843-G-T 3634802-G-T **
3598925-C-A 3730884-C-A **
3732825-C-A 3864784-C-A **
3758905-C-A 3890864-C-A **
3833401-A-G 3965360-A-G **
3848416-C-A 3980375-C-A **
3889472-C-A 4021431-C-A **
3889495-C-A 4021454-C-A **
3898599-G-T 4030558-G-T **
3950850-G-T 4082809-G-T **
3990875-C-A 4122834-C-A **
4049518-G-C 4181477-G-C **
4078645-G-A 4210604-G-A **
4094224-C-A 4226183-C-A **
4302100-C-A 4434059-C-A **
4509359-C-A 4641318-C-A **
4566804-C-A 4698763-C-A **
4580684-C-A 4712643-C-A **
4646008-G-T 4777967-G-T **
4729998-A-G 4861957-A-G **
4770527-T-C 4902486-T-C **
4862722-G-T 4994681-G-T **
4908096-C-A 5040055-C-A **
4908140-C-A 5040099-C-A **
4919471-G-T 5051430-G-T **
5135357-G-T 5267316-G-T **
5186771-T-G 5318730-T-G **
5230996-G-A 5362955-G-A **
5306022-C-A 5437981-C-A **
5560614-C-T 5692573-C-T **
5621531-G-T 5753490-G-T **
5657074-G-T 5789033-G-T **
5657082-G-T 5789041-G-T **
5824747-A-G 5956706-A-G **
5852354-C-A 5984313-C-A **
5957219-C-A 6089178-C-A **
6001436-C-A 6133395-C-A **
6037430-C-A 6169389-C-A **
6044133-G-T 6176092-G-T **
6064980-C-A 6196939-C-A **
6223558-A-AGACAG 6355517-A-AGACAG IR3_Dst **
6244482-A-T 6376441-A-T IR3_Dst **
6244484-G-A 6376443-G-A IR3_Dst **
6244486-C-CCCCAT 6376445-C-CCCCAT IR3_Dst **
6593562-C-A 6725521-C-A **
6641083-G-T 6773042-G-T **
6791188-G-A 6923147-G-A **
6791197-G-T 6923156-G-T **
6948137-G-A 7080096-G-A **
7020689-G-GAA 7152648-G-GAA **
7095158-C-A 7227117-C-A **
7098005-C-A 7229964-C-A **
7148319-G-A 7280278-G-A **
7199442-C-A 7331401-C-A **
7248576-G-T 7380535-G-T **
7277435-C-T 7409394-C-T **
7379580-A-T 7511539-A-T **
7409540-C-A 7541499-C-A **
7469795-C-A 7601754-C-A IR1_L **
7656746-C-T 7788705-C-T **
7656750-G-A 7788709-G-A **
7656756-C-T 7788715-C-T **
7690144-C-A 7822103-C-A **
7874809-C-A 8006768-C-A **
8076113-C-A 8208072-C-A **
8078697-G-A 8210656-G-A **
8094702-G-T 8226661-G-T **
8109944-C-A 8241903-C-A **
8379528-C-A 8511487-C-A **
8713715-C-A 8845674-C-A **
8735472-C-A 8867431-C-A **
8815250-T-G 8947209-T-G **
8832728-C-A 8964687-C-A **
8907663-A-T 9039622-A-T **
8988131-T-C 9150522-T-C **
9139937-TC-T 9302328-TC-T **
9371543-C-A 9533934-C-A **
9675427-G-A 9837818-G-A IR3_Prx **
9702787-C-G 9865178-C-G IR3_Prx **
9706445-C-A 9868836-C-A IR3_Prx **
9769048-C-A 9931439-C-A **
9942805-C-A 10105196-C-A **
9996100-A-G 10158491-A-G **
10032331-C-A 10194722-C-A **
10070222-T-C 10232613-T-C **
10651597-C-A **
10652069-CTCCATTCCAT-C **
10653561-A-C **
10678779-C-T FT428851 **
10747809-C-A **
10777950-C-T **
10783586-C-A **
10783626-C-A **
10783631-C-A **
10786528-T-C **
10791902-A-C **
10802376-C-A **
10802398-T-A **
10802402-A-G **
10818641-CAT-C **
10825167-C-A FT432867 **
10827879-C-A **
10841915-T-A **
10841973-T-G **
10842404-G-T **
10869807-C-A **
10881486-A-T **
10888981-T-C **
10889871-C-A **
10912569-C-A **
10924504-C-T **
10926695-T-A **
10926698-CA-C **
10933817-C-A **
10958912-G-T **
10980206-A-G **
10987499-C-T **
10989902-A-T **
10989913-C-T FT439401 **
10999865-A-C **
10999875-A-ATTCAATTATG **
11027505-C-A **
13195987-C-A 11040311-C-A **
13228050-C-A 11072374-C-A **
13231812-A-G 11076136-A-G **
13248502-G-A 11092826-G-A **
13268934-C-A 11113258-C-A **
13287273-C-A 11131597-C-A **
13288342-C-A 11132666-C-A **
13326186-T-A 11170510-T-A **
13423171-C-A 11267495-C-A **
13488958-G-GTT 11333282-G-GTT **
13497819-A-G 11342143-A-G **
13523679-A-T 11368003-A-T **
13525995-A-G 11370319-A-G **
13567163-C-A 11411487-C-A **
13594357-C-T 11438681-C-T FT446139 **
11666644-G-T **
13800712-T-A 11680006-T-A **
13809497-TGG-T 11688791-TGG-T **
13850131-G-T 11729425-G-T **
13904934-G-T 11784228-G-T **
13936482-C-T 11815776-C-T **
13937187-T-C 11816481-T-C **
13937337-C-A 11816631-C-A **
13944658-CT-C 11823952-CT-C **
13963229-G-T 11842523-G-T FT394457 **
13998093-C-A 11877387-C-A **
14032380-G-T 11911674-G-T **
14047757-G-T 11927051-G-T **
14068448-C-A 11947742-C-A **
14068451-C-A 11947745-C-A **
14068478-G-A 11947772-G-A **
14180414-C-A 12059708-C-A **
14203594-C-A 12082888-C-A **
14218464-A-G 12097758-A-G **
14226618-C-A 12105912-C-A **
14366804-C-A 12246099-C-A **
14451170-T-C 12330443-T-C **
14514217-T-C 12402422-T-C **
14564156-C-A 12452356-C-A **
14585669-A-G 12473869-A-G **
14585673-G-T 12473873-G-T **
14620358-C-T 12508556-C-T **
14660932-C-A 12548997-C-A **
14743071-T-A 12631139-T-A **
14798621-G-T 12686692-G-T **
14986340-C-T 12874408-C-T **
15115512-C-A 13003599-C-A FT21833 **
15128172-A-G 13016259-A-G **
15132090-C-A 13020177-C-A **
15172712-G-T 13060798-G-T **
15193481-C-A 13081567-C-A **
15397783-G-T 13285903-G-T **
15399371-TA-T 13287491-TA-T **
15400080-C-A 13288200-C-A **
15402819-G-A 13290939-G-A **
15816501-C-A 13704621-C-A **
15946736-C-A 13834856-C-A **
16008843-C-A 13896963-C-A **
16073020-C-A 13961140-C-A **
16090375-T-C 13978495-T-C **
16092927-T-C 13981047-T-C **
16278986-A-G 14167106-A-G **
16317069-C-A 14205189-C-A **
16384671-C-A 14272791-C-A **
16397552-T-G 14285672-T-G **
16458242-C-A 14346362-C-A **
16501057-T-C 14389177-T-C **
16522348-C-G 14410468-C-G **
16602701-C-T 14490821-C-T **
16681643-C-A 14569763-C-A **
16682811-C-T 14570931-C-T **
16682834-T-TA 14570954-T-TA **
16682837-G-T 14570957-G-T **
16682836-AG-A 14570956-AG-A **
16682848-G-A 14570968-G-A **
16682849-C-T 14570969-C-T **
16682854-C-T 14570974-C-T **
16682863-A-T 14570983-A-T **
16682872-T-A 14570992-T-A **
16682880-T-A 14571000-T-A **
16682884-A-G 14571004-A-G **
16682890-G-C 14571010-G-C **
16682893-T-G 14571013-T-G **
16682899-C-A 14571019-C-A **
16707652-C-T 14595772-C-T **
16865259-T-A 14753379-T-A **
16981210-A-AGTCT 14869330-A-AGTCT **
17061824-C-A 14949944-C-A **
17097529-C-A 14985649-C-A **
17097540-C-A 14985660-C-A **
17157574-TAA-T 15045694-TAA-T 10×A**
17285028-C-A 15173148-C-A **
17313462-T-C 15201582-T-C **
17318177-C-A 15206297-C-A **
17382434-C-A 15270554-C-A **
17406760-C-T 15294880-C-T **
17474835-A-C 15362955-A-C **
17485860-C-A 15373980-C-A **
17503710-G-T 15391830-G-T **
17540354-C-T 15428474-C-T **
17569261-C-A 15457381-C-A FGC73988 Y133931 **
17572021-C-T 15460141-C-T F21902 **
17598054-C-A 15486174-C-A **
17600541-A-G 15488661-A-G **
17616964-G-A 15505084-G-A **
17616966-CAA-C 15505086-CAA-C 35×A**
17644275-G-T 15532395-G-T **
17644319-G-T 15532439-G-T **
17707245-C-T 15595365-C-T Y53610 **
17733360-G-T 15621480-G-T **
17775132-A-AACAG 15663252-A-AACAG **
17834444-A-AC 15722564-A-AC **
17834446-GCGGTGT-G 15722566-GCGGTGT-G **
17839593-G-T 15727713-G-T **
17854402-C-A 15742522-C-A **
17854410-T-C 15742530-T-C **
17854415-T-A 15742535-T-A **
18008574-G-T 15896694-G-T P7_Dst **
18053632-C-A 15941752-C-A **
18085523-A-G 15973643-A-G **
18151722-G-C 16039842-G-C **
18361394-G-T 16249514-G-T BY121461 P6_Prx **
18730568-T-C 16618688-T-C **
18746982-CTTTT-C 16635102-CTTTT-C 13×T**
18747150-T-A 16635270-T-A **
18747150-TTG-T 16635270-TTG-T **
18795092-T-A 16683212-T-A **
18817918-C-A 16706038-C-A **
18890988-C-A 16779108-C-A **
18928605-C-A 16816725-C-A **
18948221-C-G 16836341-C-G **
18974809-A-T 16862929-A-T **
19079054-G-A 16967174-G-A **
19213841-A-G 17101961-A-G **
19216511-C-T 17104631-C-T **
19246659-C-A 17134779-C-A **
19251414-C-A 17139534-C-A **
19416500-C-A 17304620-C-A **
19461967-G-C 17350087-G-C **
19512578-A-T 17400698-A-T **
19600622-A-ATGTG 17488742-A-ATGTG P5_Prx **
19866987-A-C 17755107-A-C P5_Prx **
19946722-T-TC 17834842-T-TC P5_Prx **
20022443-C-CTAT 17910563-C-CTAT P5_Prx 24×T**
20131176-A-ACAG 18019296-A-ACAG P5_Dst **
20247747-C-CAGACAG 18085861-C-CAGACAG P5_Dst 10×A**
20271584-T-TTCTG 18109698-T-TTCTG P5_Dst **
20535172-G-T 18373286-G-T P5_Dst **
20913627-AAAAAATT-A 18751741-AAAAAATT-A P4_Dst **
20974879-C-CACAG 18812993-C-CACAG P4_Dst **
21002535-T-TTCCTG 18840649-T-TTCCTG P4_Dst 16×TC**
21106848-C-A 18944962-C-A **
21112103-C-A 18950217-C-A FT170503 **
21171955-C-A 19010069-C-A **
21196690-A-T 19034804-A-T **
21239044-C-A 19077158-C-A **
21353228-T-A 19191342-T-A **
21367736-C-A 19205850-C-A **
21380360-G-T 19218474-G-T **
21601180-T-A 19439294-T-A **
21616804-C-A 19454918-C-A **
21634306-TA-T 19472420-TA-T **
21677070-C-A 19515184-C-A **
21681259-C-T 19519373-C-T **
21708380-C-A 19546494-C-A **
21885994-C-A 19724108-C-A **
22017962-C-T 19856076-C-T **
22017967-T-A 19856081-T-A **
22023244-C-A 19861358-C-A **
22080460-C-A 19918574-C-A **
22132834-T-C 19970948-T-C **
22154024-G-T 19992138-G-T **
22422863-A-G 20260977-A-G DYZ19 **
22537810-C-A 20375924-C-A **
22541221-C-A 20379335-C-A **
22614097-CAGA-C 20452211-CAGA-C **
22614109-A-G 20452223-A-G **
22639492-C-A 20477606-C-A **
22660923-A-G 20499037-A-G **
22787076-C-A 20625190-C-A **
22954814-C-T 20792928-C-T **
22961988-T-A 20800102-T-A **
22970114-C-A 20808228-C-A **
23002786-C-A 20840900-C-A **
23013908-C-A 20852022-C-A **
23049590-C-A 20887704-C-A **
23126184-C-A 20964298-C-A **
23136970-C-A 20975084-C-A **
23198702-C-A 21036816-C-A **
23205367-C-A 21043481-C-A **
23206039-A-T 21044153-A-T **
23435724-C-A 21273838-C-A **
23440698-A-C 21278812-A-C **
23472091-C-A 21310205-C-A **
23505210-C-A 21343324-C-A **
23779948-A-G 21618062-A-G **
24264403-G-T 22118256-G-T P3_b1 **
24373292-A-G 22227145-A-G **
24435547-A-C 22289400-A-C **
24458672-G-T 22312525-G-T **
25609354-G-T 23463207-G-T P1_gr1 **
25860826-A-AACAG 23714679-A-AACAG P1_Y1 **
26122127-C-A 23975980-C-A P1_Y1 **
26199617-G-GGC 24053470-G-GGC P1_Y1 **
26199621-G-GGCTA 24053474-G-GGCTA P1_Y1 **
26377842-C-A 24231695-C-A P1_Y1 **
26380291-A-ACTGTC 24234144-A-ACTGTC P1_Y1 **
27484444-C-G 25338297-C-G P1_Y2 **
27616606-G-T 25470459-G-T P1_Y2 **
27647585-A-G 25501438-A-G P1_Y2 **
27714287-G-T 25568140-G-T P1_Y2 **
27967490-C-A 25821343-C-A P1_Y2 **
28022183-A-AACAG 25876036-A-AACAG P1_Y2 **
28485884-A-G 26339737-A-G **
28506532-C-A 26360385-C-A **
28547424-C-A 26401277-C-A **
28550050-G-T 26403903-G-T **
28560212-C-A 26414065-C-A **
28570102-A-G 26423955-A-G **
28587956-T-C 26441809-T-C **
28633702-G-A 26487555-G-A **
28636110-G-A 26489963-G-A **
28656832-A-T 26510685-A-T **
28659917-C-A 26513770-C-A **
28673109-C-A 26526962-C-A **
28720873-C-A 26574726-C-A FT353660 **
28739748-G-T 26593601-G-T **
28762364-T-G 26616217-T-G **
28765387-A-G 26619240-A-G **
28773768-A-C 26627621-A-C **
28779020-C-A 26632873-C-A **
28798800-G-A 26652653-G-A **
56834998-C-T **
56836065-C-A **
56838851-C-A **
56840871-G-C **
56840871-GATA-G **
56843990-T-A **
30124-A-G **
30126-A-G **
4619545-A-G 4751504-A-G **
14682248-G-T 12570314-G-T **
16107394-C-T 13995514-C-T P8_Prx **
16169459-A-G 14057579-A-G **
17407316-A-G 15295436-A-G **
19670940-T-G 17559060-T-G P5_Prx **
16364058-C-CTA 14252178-C-CTA 27×TA***
14062008-TACA-T 11941302-TACA-T ***
10033539-G-A 10195930-G-A ***
3640676-T-C 3772635-T-C ***
21476248-C-T 19314362-C-T ***
22040764-GA-G 19878878-GA-G 9×A***
4240662-C-A 4372621-C-A ***
25995054-T-TAC 23848907-T-TAC P1_Y1 ***
10895875-C-T ***
10789311-G-T ***
5242442-C-A 5374401-C-A ***
3272754-C-A 3404713-C-A ***
4241786-G-A 4373745-G-A ***
8130707-C-A 8262666-C-A ***
8230629-C-A 8362588-C-A ***
8399073-G-T 8531032-G-T ***
9404477-T-C 9566868-T-C ***
9874177-C-A 10036568-C-A ***
10772390-C-A ***
10805159-G-A ***
10809518-C-A ***
10895851-C-A ***
11017800-C-A ***
13441632-G-GAA 11285956-G-GAA 11×A***
13601934-G-A 11446258-G-A ***
11650474-AT-A ***
15776009-A-G 13664129-A-G ***
15926790-G-A 13814910-G-A ***
16006689-G-T 13894809-G-T ***
16439968-C-A 14328088-C-A ***
16621425-C-A 14509545-C-A ***
16738279-G-T 14626399-G-T ***
17284544-T-C 15172664-T-C ***
19304728-C-A 17192848-C-A ***
19415434-C-A 17303554-C-A ***
22797980-A-T 20636094-A-T ***
22797991-C-T 20636105-C-T ***
22797992-T-A 20636106-T-A ***
23832790-C-A 21670904-C-A ***
24435556-T-A 22289409-T-A ***
28111752-C-T 25965605-C-T BY188735 P1_Y2 ***
56832858-CCATTCCA-C ***
56837112-C-A ***
56849164-G-T ***
56829798-CTCCACTCCACTCTAG-C ***
5962235-T-C 6094194-T-C ***
10654476-C-G ***
10654477-C-A ***
14203430-CAAAAAAAA-C 12082724-CAAAAAAAA-C 23×A***
16818781-G-A 14706901-G-A ***
19820794-G-A 17708914-G-A P5_Prx ***
21464536-CAA-C,CAAAA 19302650-CAA-C,CAAAA 19×A***
22962024-T-A 20800138-T-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.