Black
FTDNA: 242907, BigY3: 242907, BigY2: 242907Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 242907 | BigY3 242907 | BigY2 242907 |
---|---|---|---|---|---|---|---|---|---|---|
19746077-G-GTATC | 17634197-G-GTATC | P5_Prx | 5×TATC | A* | ||||||
13449585-T-C | 11293909-T-C | A* | ||||||||
56833626-T-G | A* | |||||||||
21606777-G-A | 19444891-G-A | BY134123 | Y | Y | + | + | + | |||
13452507-G-GACTTC | 11296831-G-GACTTC | * | ||||||||
56822403-T-G | * | |||||||||
9916992-C-T | 10079383-C-T | PF4248 | ** | |||||||
8901074-C-T | 9033033-C-T | FT89929 | ** | |||||||
18928753-GA-G | 16816873-GA-G | 9×A | ** | |||||||
6722124-T-G | 6854083-T-G | K451 | ** | |||||||
6722126-A-T | 6854085-A-T | ** | ||||||||
16181404-T-A | 14069524-T-A | ** | ** | |||||||
3051306-C-A | 3183265-C-A | Z9913 | ** | |||||||
58985560-G-A | 56839413-G-A | ** | ||||||||
6978348-C-A | 7110307-C-A | ** | ||||||||
23200854-A-G | 21038968-A-G | ** | ||||||||
10987761-T-G | ** | |||||||||
21464513-C-A | 19302627-C-A | ** | ||||||||
13258459-C-A | 11102783-C-A | ** | ||||||||
14246721-C-A | 12126015-C-A | ** | ||||||||
13942341-C-A | 11821635-C-A | ** | ||||||||
23603174-C-A | 21441288-C-A | ** | ||||||||
10812525-G-T | ** | |||||||||
14000532-C-A | 11879826-C-A | ** | ||||||||
13234993-T-A | 11079317-T-A | ** | ||||||||
56829892-C-A | ** | |||||||||
28679683-C-A | 26533536-C-A | ** | ||||||||
27398546-G-A | 25252399-G-A | P1_g3 | ** | |||||||
10926715-T-G | ** | |||||||||
4282177-C-A | 4414136-C-A | ** | ||||||||
10673943-C-T | ** | |||||||||
10816144-A-G | ** | |||||||||
10816160-A-T | ** | |||||||||
10816165-G-T | ** | |||||||||
5219315-C-A | 5351274-C-A | ** | ||||||||
4918382-C-A | 5050341-C-A | ** | ||||||||
16412567-C-A | 14300687-C-A | ** | ||||||||
17547809-C-A | 15435929-C-A | ** | ||||||||
3492685-C-A | 3624644-C-A | ** | ||||||||
10924502-G-C | ** | |||||||||
14585820-G-T | 12474020-G-T | ** | ||||||||
10747038-C-T | FT429408 | ** | ||||||||
24353293-T-C | 22207146-T-C | P3_t1 | ** | |||||||
7613828-C-A | 7745787-C-A | ** | ||||||||
14236008-C-A | 12115302-C-A | ** | ||||||||
3536238-C-A | 3668197-C-A | ** | ||||||||
14174924-C-A | 12054218-C-A | ** | ||||||||
10790188-C-A | ** | |||||||||
20751839-T-TG | 18589953-T-TG | P4_Prx | ** | |||||||
24577875-ATGC-A | 22431728-ATGC-A | P3_t2 | ** | |||||||
28688429-C-A | 26542282-C-A | ** | ||||||||
13961474-C-A | 11840768-C-A | ** | ||||||||
3467239-C-A | 3599198-C-A | ** | ||||||||
23198150-C-T | 21036264-C-T | ** | ||||||||
3250694-C-A | 3382653-C-A | ** | ||||||||
16170307-T-C | 14058427-T-C | ** | ||||||||
3427067-G-T | 3559026-G-T | ** | ||||||||
27596066-G-A | 25449919-G-A | P1_Y2 | ** | |||||||
13394972-C-A | 11239296-C-A | ** | ||||||||
27801226-A-AG | 25655079-A-AG | P1_Y2 | ** | |||||||
10926712-C-A | ** | |||||||||
2683399-C-A | 2815358-C-A | ** | ||||||||
2697541-G-T | 2829500-G-T | ** | ||||||||
2729825-T-C | 2861784-T-C | ** | ||||||||
2744897-G-T | 2876856-G-T | FT32970 | ** | |||||||
3081812-CAA-C | 3213771-CAA-C | 33×A | ** | |||||||
3093247-C-A | 3225206-C-A | ** | ||||||||
3123380-C-A | 3255339-C-A | ** | ||||||||
3165097-G-T | 3297056-G-T | ** | ||||||||
3274227-C-A | 3406186-C-A | ** | ||||||||
3310651-T-A | 3442610-T-A | ** | ||||||||
3346845-G-T | 3478804-G-T | ** | ||||||||
3429195-C-A | 3561154-C-A | ** | ||||||||
3467451-T-A | 3599410-T-A | ** | ||||||||
3467618-C-A | 3599577-C-A | ** | ||||||||
3487275-C-A | 3619234-C-A | ** | ||||||||
3502843-G-T | 3634802-G-T | ** | ||||||||
3598925-C-A | 3730884-C-A | ** | ||||||||
3732825-C-A | 3864784-C-A | ** | ||||||||
3758905-C-A | 3890864-C-A | ** | ||||||||
3833401-A-G | 3965360-A-G | ** | ||||||||
3848416-C-A | 3980375-C-A | ** | ||||||||
3889472-C-A | 4021431-C-A | ** | ||||||||
3889495-C-A | 4021454-C-A | ** | ||||||||
3898599-G-T | 4030558-G-T | ** | ||||||||
3950850-G-T | 4082809-G-T | ** | ||||||||
3990875-C-A | 4122834-C-A | ** | ||||||||
4049518-G-C | 4181477-G-C | ** | ||||||||
4078645-G-A | 4210604-G-A | ** | ||||||||
4094224-C-A | 4226183-C-A | ** | ||||||||
4302100-C-A | 4434059-C-A | ** | ||||||||
4509359-C-A | 4641318-C-A | ** | ||||||||
4566804-C-A | 4698763-C-A | ** | ||||||||
4580684-C-A | 4712643-C-A | ** | ||||||||
4646008-G-T | 4777967-G-T | ** | ||||||||
4729998-A-G | 4861957-A-G | ** | ||||||||
4770527-T-C | 4902486-T-C | ** | ||||||||
4862722-G-T | 4994681-G-T | ** | ||||||||
4908096-C-A | 5040055-C-A | ** | ||||||||
4908140-C-A | 5040099-C-A | ** | ||||||||
4919471-G-T | 5051430-G-T | ** | ||||||||
5135357-G-T | 5267316-G-T | ** | ||||||||
5186771-T-G | 5318730-T-G | ** | ||||||||
5230996-G-A | 5362955-G-A | ** | ||||||||
5306022-C-A | 5437981-C-A | ** | ||||||||
5560614-C-T | 5692573-C-T | ** | ||||||||
5621531-G-T | 5753490-G-T | ** | ||||||||
5657074-G-T | 5789033-G-T | ** | ||||||||
5657082-G-T | 5789041-G-T | ** | ||||||||
5824747-A-G | 5956706-A-G | ** | ||||||||
5852354-C-A | 5984313-C-A | ** | ||||||||
5957219-C-A | 6089178-C-A | ** | ||||||||
6001436-C-A | 6133395-C-A | ** | ||||||||
6037430-C-A | 6169389-C-A | ** | ||||||||
6044133-G-T | 6176092-G-T | ** | ||||||||
6064980-C-A | 6196939-C-A | ** | ||||||||
6223558-A-AGACAG | 6355517-A-AGACAG | IR3_Dst | ** | |||||||
6244482-A-T | 6376441-A-T | IR3_Dst | ** | |||||||
6244484-G-A | 6376443-G-A | IR3_Dst | ** | |||||||
6244486-C-CCCCAT | 6376445-C-CCCCAT | IR3_Dst | ** | |||||||
6593562-C-A | 6725521-C-A | ** | ||||||||
6641083-G-T | 6773042-G-T | ** | ||||||||
6791188-G-A | 6923147-G-A | ** | ||||||||
6791197-G-T | 6923156-G-T | ** | ||||||||
6948137-G-A | 7080096-G-A | ** | ||||||||
7020689-G-GAA | 7152648-G-GAA | ** | ||||||||
7095158-C-A | 7227117-C-A | ** | ||||||||
7098005-C-A | 7229964-C-A | ** | ||||||||
7148319-G-A | 7280278-G-A | ** | ||||||||
7199442-C-A | 7331401-C-A | ** | ||||||||
7248576-G-T | 7380535-G-T | ** | ||||||||
7277435-C-T | 7409394-C-T | ** | ||||||||
7379580-A-T | 7511539-A-T | ** | ||||||||
7409540-C-A | 7541499-C-A | ** | ||||||||
7469795-C-A | 7601754-C-A | IR1_L | ** | |||||||
7656746-C-T | 7788705-C-T | ** | ||||||||
7656750-G-A | 7788709-G-A | ** | ||||||||
7656756-C-T | 7788715-C-T | ** | ||||||||
7690144-C-A | 7822103-C-A | ** | ||||||||
7874809-C-A | 8006768-C-A | ** | ||||||||
8076113-C-A | 8208072-C-A | ** | ||||||||
8078697-G-A | 8210656-G-A | ** | ||||||||
8094702-G-T | 8226661-G-T | ** | ||||||||
8109944-C-A | 8241903-C-A | ** | ||||||||
8379528-C-A | 8511487-C-A | ** | ||||||||
8713715-C-A | 8845674-C-A | ** | ||||||||
8735472-C-A | 8867431-C-A | ** | ||||||||
8815250-T-G | 8947209-T-G | ** | ||||||||
8832728-C-A | 8964687-C-A | ** | ||||||||
8907663-A-T | 9039622-A-T | ** | ||||||||
8988131-T-C | 9150522-T-C | ** | ||||||||
9139937-TC-T | 9302328-TC-T | ** | ||||||||
9371543-C-A | 9533934-C-A | ** | ||||||||
9675427-G-A | 9837818-G-A | IR3_Prx | ** | |||||||
9702787-C-G | 9865178-C-G | IR3_Prx | ** | |||||||
9706445-C-A | 9868836-C-A | IR3_Prx | ** | |||||||
9769048-C-A | 9931439-C-A | ** | ||||||||
9942805-C-A | 10105196-C-A | ** | ||||||||
9996100-A-G | 10158491-A-G | ** | ||||||||
10032331-C-A | 10194722-C-A | ** | ||||||||
10070222-T-C | 10232613-T-C | ** | ||||||||
10651597-C-A | ** | |||||||||
10652069-CTCCATTCCAT-C | ** | |||||||||
10653561-A-C | ** | |||||||||
10678779-C-T | FT428851 | ** | ||||||||
10747809-C-A | ** | |||||||||
10777950-C-T | ** | |||||||||
10783586-C-A | ** | |||||||||
10783626-C-A | ** | |||||||||
10783631-C-A | ** | |||||||||
10786528-T-C | ** | |||||||||
10791902-A-C | ** | |||||||||
10802376-C-A | ** | |||||||||
10802398-T-A | ** | |||||||||
10802402-A-G | ** | |||||||||
10818641-CAT-C | ** | |||||||||
10825167-C-A | FT432867 | ** | ||||||||
10827879-C-A | ** | |||||||||
10841915-T-A | ** | |||||||||
10841973-T-G | ** | |||||||||
10842404-G-T | ** | |||||||||
10869807-C-A | ** | |||||||||
10881486-A-T | ** | |||||||||
10888981-T-C | ** | |||||||||
10889871-C-A | ** | |||||||||
10912569-C-A | ** | |||||||||
10924504-C-T | ** | |||||||||
10926695-T-A | ** | |||||||||
10926698-CA-C | ** | |||||||||
10933817-C-A | ** | |||||||||
10958912-G-T | ** | |||||||||
10980206-A-G | ** | |||||||||
10987499-C-T | ** | |||||||||
10989902-A-T | ** | |||||||||
10989913-C-T | FT439401 | ** | ||||||||
10999865-A-C | ** | |||||||||
10999875-A-ATTCAATTATG | ** | |||||||||
11027505-C-A | ** | |||||||||
13195987-C-A | 11040311-C-A | ** | ||||||||
13228050-C-A | 11072374-C-A | ** | ||||||||
13231812-A-G | 11076136-A-G | ** | ||||||||
13248502-G-A | 11092826-G-A | ** | ||||||||
13268934-C-A | 11113258-C-A | ** | ||||||||
13287273-C-A | 11131597-C-A | ** | ||||||||
13288342-C-A | 11132666-C-A | ** | ||||||||
13326186-T-A | 11170510-T-A | ** | ||||||||
13423171-C-A | 11267495-C-A | ** | ||||||||
13488958-G-GTT | 11333282-G-GTT | ** | ||||||||
13497819-A-G | 11342143-A-G | ** | ||||||||
13523679-A-T | 11368003-A-T | ** | ||||||||
13525995-A-G | 11370319-A-G | ** | ||||||||
13567163-C-A | 11411487-C-A | ** | ||||||||
13594357-C-T | 11438681-C-T | FT446139 | ** | |||||||
11666644-G-T | ** | |||||||||
13800712-T-A | 11680006-T-A | ** | ||||||||
13809497-TGG-T | 11688791-TGG-T | ** | ||||||||
13850131-G-T | 11729425-G-T | ** | ||||||||
13904934-G-T | 11784228-G-T | ** | ||||||||
13936482-C-T | 11815776-C-T | ** | ||||||||
13937187-T-C | 11816481-T-C | ** | ||||||||
13937337-C-A | 11816631-C-A | ** | ||||||||
13944658-CT-C | 11823952-CT-C | ** | ||||||||
13963229-G-T | 11842523-G-T | FT394457 | ** | |||||||
13998093-C-A | 11877387-C-A | ** | ||||||||
14032380-G-T | 11911674-G-T | ** | ||||||||
14047757-G-T | 11927051-G-T | ** | ||||||||
14068448-C-A | 11947742-C-A | ** | ||||||||
14068451-C-A | 11947745-C-A | ** | ||||||||
14068478-G-A | 11947772-G-A | ** | ||||||||
14180414-C-A | 12059708-C-A | ** | ||||||||
14203594-C-A | 12082888-C-A | ** | ||||||||
14218464-A-G | 12097758-A-G | ** | ||||||||
14226618-C-A | 12105912-C-A | ** | ||||||||
14366804-C-A | 12246099-C-A | ** | ||||||||
14451170-T-C | 12330443-T-C | ** | ||||||||
14514217-T-C | 12402422-T-C | ** | ||||||||
14564156-C-A | 12452356-C-A | ** | ||||||||
14585669-A-G | 12473869-A-G | ** | ||||||||
14585673-G-T | 12473873-G-T | ** | ||||||||
14620358-C-T | 12508556-C-T | ** | ||||||||
14660932-C-A | 12548997-C-A | ** | ||||||||
14743071-T-A | 12631139-T-A | ** | ||||||||
14798621-G-T | 12686692-G-T | ** | ||||||||
14986340-C-T | 12874408-C-T | ** | ||||||||
15115512-C-A | 13003599-C-A | FT21833 | ** | |||||||
15128172-A-G | 13016259-A-G | ** | ||||||||
15132090-C-A | 13020177-C-A | ** | ||||||||
15172712-G-T | 13060798-G-T | ** | ||||||||
15193481-C-A | 13081567-C-A | ** | ||||||||
15397783-G-T | 13285903-G-T | ** | ||||||||
15399371-TA-T | 13287491-TA-T | ** | ||||||||
15400080-C-A | 13288200-C-A | ** | ||||||||
15402819-G-A | 13290939-G-A | ** | ||||||||
15816501-C-A | 13704621-C-A | ** | ||||||||
15946736-C-A | 13834856-C-A | ** | ||||||||
16008843-C-A | 13896963-C-A | ** | ||||||||
16073020-C-A | 13961140-C-A | ** | ||||||||
16090375-T-C | 13978495-T-C | ** | ||||||||
16092927-T-C | 13981047-T-C | ** | ||||||||
16278986-A-G | 14167106-A-G | ** | ||||||||
16317069-C-A | 14205189-C-A | ** | ||||||||
16384671-C-A | 14272791-C-A | ** | ||||||||
16397552-T-G | 14285672-T-G | ** | ||||||||
16458242-C-A | 14346362-C-A | ** | ||||||||
16501057-T-C | 14389177-T-C | ** | ||||||||
16522348-C-G | 14410468-C-G | ** | ||||||||
16602701-C-T | 14490821-C-T | ** | ||||||||
16681643-C-A | 14569763-C-A | ** | ||||||||
16682811-C-T | 14570931-C-T | ** | ||||||||
16682834-T-TA | 14570954-T-TA | ** | ||||||||
16682837-G-T | 14570957-G-T | ** | ||||||||
16682836-AG-A | 14570956-AG-A | ** | ||||||||
16682848-G-A | 14570968-G-A | ** | ||||||||
16682849-C-T | 14570969-C-T | ** | ||||||||
16682854-C-T | 14570974-C-T | ** | ||||||||
16682863-A-T | 14570983-A-T | ** | ||||||||
16682872-T-A | 14570992-T-A | ** | ||||||||
16682880-T-A | 14571000-T-A | ** | ||||||||
16682884-A-G | 14571004-A-G | ** | ||||||||
16682890-G-C | 14571010-G-C | ** | ||||||||
16682893-T-G | 14571013-T-G | ** | ||||||||
16682899-C-A | 14571019-C-A | ** | ||||||||
16707652-C-T | 14595772-C-T | ** | ||||||||
16865259-T-A | 14753379-T-A | ** | ||||||||
16981210-A-AGTCT | 14869330-A-AGTCT | ** | ||||||||
17061824-C-A | 14949944-C-A | ** | ||||||||
17097529-C-A | 14985649-C-A | ** | ||||||||
17097540-C-A | 14985660-C-A | ** | ||||||||
17157574-TAA-T | 15045694-TAA-T | 10×A | ** | |||||||
17285028-C-A | 15173148-C-A | ** | ||||||||
17313462-T-C | 15201582-T-C | ** | ||||||||
17318177-C-A | 15206297-C-A | ** | ||||||||
17382434-C-A | 15270554-C-A | ** | ||||||||
17406760-C-T | 15294880-C-T | ** | ||||||||
17474835-A-C | 15362955-A-C | ** | ||||||||
17485860-C-A | 15373980-C-A | ** | ||||||||
17503710-G-T | 15391830-G-T | ** | ||||||||
17540354-C-T | 15428474-C-T | ** | ||||||||
17569261-C-A | 15457381-C-A | FGC73988 Y133931 | ** | |||||||
17572021-C-T | 15460141-C-T | F21902 | ** | |||||||
17598054-C-A | 15486174-C-A | ** | ||||||||
17600541-A-G | 15488661-A-G | ** | ||||||||
17616964-G-A | 15505084-G-A | ** | ||||||||
17616966-CAA-C | 15505086-CAA-C | 35×A | ** | |||||||
17644275-G-T | 15532395-G-T | ** | ||||||||
17644319-G-T | 15532439-G-T | ** | ||||||||
17707245-C-T | 15595365-C-T | Y53610 | ** | |||||||
17733360-G-T | 15621480-G-T | ** | ||||||||
17775132-A-AACAG | 15663252-A-AACAG | ** | ||||||||
17834444-A-AC | 15722564-A-AC | ** | ||||||||
17834446-GCGGTGT-G | 15722566-GCGGTGT-G | ** | ||||||||
17839593-G-T | 15727713-G-T | ** | ||||||||
17854402-C-A | 15742522-C-A | ** | ||||||||
17854410-T-C | 15742530-T-C | ** | ||||||||
17854415-T-A | 15742535-T-A | ** | ||||||||
18008574-G-T | 15896694-G-T | P7_Dst | ** | |||||||
18053632-C-A | 15941752-C-A | ** | ||||||||
18085523-A-G | 15973643-A-G | ** | ||||||||
18151722-G-C | 16039842-G-C | ** | ||||||||
18361394-G-T | 16249514-G-T | BY121461 | P6_Prx | ** | ||||||
18730568-T-C | 16618688-T-C | ** | ||||||||
18746982-CTTTT-C | 16635102-CTTTT-C | 13×T | ** | |||||||
18747150-T-A | 16635270-T-A | ** | ||||||||
18747150-TTG-T | 16635270-TTG-T | ** | ||||||||
18795092-T-A | 16683212-T-A | ** | ||||||||
18817918-C-A | 16706038-C-A | ** | ||||||||
18890988-C-A | 16779108-C-A | ** | ||||||||
18928605-C-A | 16816725-C-A | ** | ||||||||
18948221-C-G | 16836341-C-G | ** | ||||||||
18974809-A-T | 16862929-A-T | ** | ||||||||
19079054-G-A | 16967174-G-A | ** | ||||||||
19213841-A-G | 17101961-A-G | ** | ||||||||
19216511-C-T | 17104631-C-T | ** | ||||||||
19246659-C-A | 17134779-C-A | ** | ||||||||
19251414-C-A | 17139534-C-A | ** | ||||||||
19416500-C-A | 17304620-C-A | ** | ||||||||
19461967-G-C | 17350087-G-C | ** | ||||||||
19512578-A-T | 17400698-A-T | ** | ||||||||
19600622-A-ATGTG | 17488742-A-ATGTG | P5_Prx | ** | |||||||
19866987-A-C | 17755107-A-C | P5_Prx | ** | |||||||
19946722-T-TC | 17834842-T-TC | P5_Prx | ** | |||||||
20022443-C-CTAT | 17910563-C-CTAT | P5_Prx | 24×T | ** | ||||||
20131176-A-ACAG | 18019296-A-ACAG | P5_Dst | ** | |||||||
20247747-C-CAGACAG | 18085861-C-CAGACAG | P5_Dst | 10×A | ** | ||||||
20271584-T-TTCTG | 18109698-T-TTCTG | P5_Dst | ** | |||||||
20535172-G-T | 18373286-G-T | P5_Dst | ** | |||||||
20913627-AAAAAATT-A | 18751741-AAAAAATT-A | P4_Dst | ** | |||||||
20974879-C-CACAG | 18812993-C-CACAG | P4_Dst | ** | |||||||
21002535-T-TTCCTG | 18840649-T-TTCCTG | P4_Dst | 16×TC | ** | ||||||
21106848-C-A | 18944962-C-A | ** | ||||||||
21112103-C-A | 18950217-C-A | FT170503 | ** | |||||||
21171955-C-A | 19010069-C-A | ** | ||||||||
21196690-A-T | 19034804-A-T | ** | ||||||||
21239044-C-A | 19077158-C-A | ** | ||||||||
21353228-T-A | 19191342-T-A | ** | ||||||||
21367736-C-A | 19205850-C-A | ** | ||||||||
21380360-G-T | 19218474-G-T | ** | ||||||||
21601180-T-A | 19439294-T-A | ** | ||||||||
21616804-C-A | 19454918-C-A | ** | ||||||||
21634306-TA-T | 19472420-TA-T | ** | ||||||||
21677070-C-A | 19515184-C-A | ** | ||||||||
21681259-C-T | 19519373-C-T | ** | ||||||||
21708380-C-A | 19546494-C-A | ** | ||||||||
21885994-C-A | 19724108-C-A | ** | ||||||||
22017962-C-T | 19856076-C-T | ** | ||||||||
22017967-T-A | 19856081-T-A | ** | ||||||||
22023244-C-A | 19861358-C-A | ** | ||||||||
22080460-C-A | 19918574-C-A | ** | ||||||||
22132834-T-C | 19970948-T-C | ** | ||||||||
22154024-G-T | 19992138-G-T | ** | ||||||||
22422863-A-G | 20260977-A-G | DYZ19 | ** | |||||||
22537810-C-A | 20375924-C-A | ** | ||||||||
22541221-C-A | 20379335-C-A | ** | ||||||||
22614097-CAGA-C | 20452211-CAGA-C | ** | ||||||||
22614109-A-G | 20452223-A-G | ** | ||||||||
22639492-C-A | 20477606-C-A | ** | ||||||||
22660923-A-G | 20499037-A-G | ** | ||||||||
22787076-C-A | 20625190-C-A | ** | ||||||||
22954814-C-T | 20792928-C-T | ** | ||||||||
22961988-T-A | 20800102-T-A | ** | ||||||||
22970114-C-A | 20808228-C-A | ** | ||||||||
23002786-C-A | 20840900-C-A | ** | ||||||||
23013908-C-A | 20852022-C-A | ** | ||||||||
23049590-C-A | 20887704-C-A | ** | ||||||||
23126184-C-A | 20964298-C-A | ** | ||||||||
23136970-C-A | 20975084-C-A | ** | ||||||||
23198702-C-A | 21036816-C-A | ** | ||||||||
23205367-C-A | 21043481-C-A | ** | ||||||||
23206039-A-T | 21044153-A-T | ** | ||||||||
23435724-C-A | 21273838-C-A | ** | ||||||||
23440698-A-C | 21278812-A-C | ** | ||||||||
23472091-C-A | 21310205-C-A | ** | ||||||||
23505210-C-A | 21343324-C-A | ** | ||||||||
23779948-A-G | 21618062-A-G | ** | ||||||||
24264403-G-T | 22118256-G-T | P3_b1 | ** | |||||||
24373292-A-G | 22227145-A-G | ** | ||||||||
24435547-A-C | 22289400-A-C | ** | ||||||||
24458672-G-T | 22312525-G-T | ** | ||||||||
25609354-G-T | 23463207-G-T | P1_gr1 | ** | |||||||
25860826-A-AACAG | 23714679-A-AACAG | P1_Y1 | ** | |||||||
26122127-C-A | 23975980-C-A | P1_Y1 | ** | |||||||
26199617-G-GGC | 24053470-G-GGC | P1_Y1 | ** | |||||||
26199621-G-GGCTA | 24053474-G-GGCTA | P1_Y1 | ** | |||||||
26377842-C-A | 24231695-C-A | P1_Y1 | ** | |||||||
26380291-A-ACTGTC | 24234144-A-ACTGTC | P1_Y1 | ** | |||||||
27484444-C-G | 25338297-C-G | P1_Y2 | ** | |||||||
27616606-G-T | 25470459-G-T | P1_Y2 | ** | |||||||
27647585-A-G | 25501438-A-G | P1_Y2 | ** | |||||||
27714287-G-T | 25568140-G-T | P1_Y2 | ** | |||||||
27967490-C-A | 25821343-C-A | P1_Y2 | ** | |||||||
28022183-A-AACAG | 25876036-A-AACAG | P1_Y2 | ** | |||||||
28485884-A-G | 26339737-A-G | ** | ||||||||
28506532-C-A | 26360385-C-A | ** | ||||||||
28547424-C-A | 26401277-C-A | ** | ||||||||
28550050-G-T | 26403903-G-T | ** | ||||||||
28560212-C-A | 26414065-C-A | ** | ||||||||
28570102-A-G | 26423955-A-G | ** | ||||||||
28587956-T-C | 26441809-T-C | ** | ||||||||
28633702-G-A | 26487555-G-A | ** | ||||||||
28636110-G-A | 26489963-G-A | ** | ||||||||
28656832-A-T | 26510685-A-T | ** | ||||||||
28659917-C-A | 26513770-C-A | ** | ||||||||
28673109-C-A | 26526962-C-A | ** | ||||||||
28720873-C-A | 26574726-C-A | FT353660 | ** | |||||||
28739748-G-T | 26593601-G-T | ** | ||||||||
28762364-T-G | 26616217-T-G | ** | ||||||||
28765387-A-G | 26619240-A-G | ** | ||||||||
28773768-A-C | 26627621-A-C | ** | ||||||||
28779020-C-A | 26632873-C-A | ** | ||||||||
28798800-G-A | 26652653-G-A | ** | ||||||||
56834998-C-T | ** | |||||||||
56836065-C-A | ** | |||||||||
56838851-C-A | ** | |||||||||
56840871-G-C | ** | |||||||||
56840871-GATA-G | ** | |||||||||
56843990-T-A | ** | |||||||||
30124-A-G | ** | |||||||||
30126-A-G | ** | |||||||||
4619545-A-G | 4751504-A-G | ** | ||||||||
14682248-G-T | 12570314-G-T | ** | ||||||||
16107394-C-T | 13995514-C-T | P8_Prx | ** | |||||||
16169459-A-G | 14057579-A-G | ** | ||||||||
17407316-A-G | 15295436-A-G | ** | ||||||||
19670940-T-G | 17559060-T-G | P5_Prx | ** | |||||||
16364058-C-CTA | 14252178-C-CTA | 27×TA | *** | |||||||
14062008-TACA-T | 11941302-TACA-T | *** | ||||||||
10033539-G-A | 10195930-G-A | *** | ||||||||
3640676-T-C | 3772635-T-C | *** | ||||||||
21476248-C-T | 19314362-C-T | *** | ||||||||
22040764-GA-G | 19878878-GA-G | 9×A | *** | |||||||
4240662-C-A | 4372621-C-A | *** | ||||||||
25995054-T-TAC | 23848907-T-TAC | P1_Y1 | *** | |||||||
10895875-C-T | *** | |||||||||
10789311-G-T | *** | |||||||||
5242442-C-A | 5374401-C-A | *** | ||||||||
3272754-C-A | 3404713-C-A | *** | ||||||||
4241786-G-A | 4373745-G-A | *** | ||||||||
8130707-C-A | 8262666-C-A | *** | ||||||||
8230629-C-A | 8362588-C-A | *** | ||||||||
8399073-G-T | 8531032-G-T | *** | ||||||||
9404477-T-C | 9566868-T-C | *** | ||||||||
9874177-C-A | 10036568-C-A | *** | ||||||||
10772390-C-A | *** | |||||||||
10805159-G-A | *** | |||||||||
10809518-C-A | *** | |||||||||
10895851-C-A | *** | |||||||||
11017800-C-A | *** | |||||||||
13441632-G-GAA | 11285956-G-GAA | 11×A | *** | |||||||
13601934-G-A | 11446258-G-A | *** | ||||||||
11650474-AT-A | *** | |||||||||
15776009-A-G | 13664129-A-G | *** | ||||||||
15926790-G-A | 13814910-G-A | *** | ||||||||
16006689-G-T | 13894809-G-T | *** | ||||||||
16439968-C-A | 14328088-C-A | *** | ||||||||
16621425-C-A | 14509545-C-A | *** | ||||||||
16738279-G-T | 14626399-G-T | *** | ||||||||
17284544-T-C | 15172664-T-C | *** | ||||||||
19304728-C-A | 17192848-C-A | *** | ||||||||
19415434-C-A | 17303554-C-A | *** | ||||||||
22797980-A-T | 20636094-A-T | *** | ||||||||
22797991-C-T | 20636105-C-T | *** | ||||||||
22797992-T-A | 20636106-T-A | *** | ||||||||
23832790-C-A | 21670904-C-A | *** | ||||||||
24435556-T-A | 22289409-T-A | *** | ||||||||
28111752-C-T | 25965605-C-T | BY188735 | P1_Y2 | *** | ||||||
56832858-CCATTCCA-C | *** | |||||||||
56837112-C-A | *** | |||||||||
56849164-G-T | *** | |||||||||
56829798-CTCCACTCCACTCTAG-C | *** | |||||||||
5962235-T-C | 6094194-T-C | *** | ||||||||
10654476-C-G | *** | |||||||||
10654477-C-A | *** | |||||||||
14203430-CAAAAAAAA-C | 12082724-CAAAAAAAA-C | 23×A | *** | |||||||
16818781-G-A | 14706901-G-A | *** | ||||||||
19820794-G-A | 17708914-G-A | P5_Prx | *** | |||||||
21464536-CAA-C,CAAAA | 19302650-CAA-C,CAAAA | 19×A | *** | |||||||
22962024-T-A | 20800138-T-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.