McConkey
FTDNA: 84366, BigY2: 84366Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 84366 | BigY2 84366 |
---|---|---|---|---|---|---|---|---|---|
28817841-T-G | 26671694-T-G | A* | |||||||
19023654-GA-G | 16911774-GA-G | BY18361 | + | + | |||||
21308729-T-C | 19146843-T-C | FGC36366 | Y | Y | + | + | |||
28732092-A-G | 26585945-A-G | ** | |||||||
21283207-T-TA | 19121321-T-TA | 8×A | ** | ||||||
6948125-G-T | 7080084-G-T | ** | |||||||
14341369-T-C | 12220664-T-C | Y7553 | ** | ||||||
2684680-C-G | 2816639-C-G | Z34557 | ** | ||||||
58981342-A-T | 56835195-A-T | ** | |||||||
58981347-A-G | 56835200-A-G | ** | |||||||
3987819-C-A | 4119778-C-A | ** | |||||||
10804667-G-T | ** | ||||||||
19415655-C-A | 17303775-C-A | ** | |||||||
14380089-A-T | 12259385-A-T | ** | |||||||
4261854-C-A | 4393813-C-A | ** | |||||||
5609430-C-A | 5741389-C-A | ** | |||||||
28469428-C-A | 26323281-C-A | ** | |||||||
14200522-C-A | 12079816-C-A | ** | |||||||
7363156-C-A | 7495115-C-A | ** | |||||||
19391189-A-T | 17279309-A-T | ** | |||||||
26204665-A-C | 24058518-A-C | P1_Y1 | ** | ||||||
4957931-G-T | 5089890-G-T | FT103997 | ** | ||||||
10985202-T-C | ** | ||||||||
5127607-C-A | 5259566-C-A | ** | |||||||
23128514-C-A | 20966628-C-A | ** | |||||||
4356871-C-A | 4488830-C-A | ** | |||||||
10939334-T-C | ** | ||||||||
17567398-C-A | 15455518-C-A | ** | |||||||
7780703-C-A | 7912662-C-A | MF3126 | ** | ||||||
11030122-C-T | ** | ||||||||
13576078-C-A | 11420402-C-A | ** | |||||||
19692990-T-TC | 17581110-T-TC | P5_Prx | ** | ||||||
6832042-C-A | 6964001-C-A | ** | |||||||
28570685-C-A | 26424538-C-A | ** | |||||||
10669541-T-C | ** | ||||||||
10820947-C-A | ** | ||||||||
11019020-C-A | ** | ||||||||
18625406-A-G | 16513526-A-G | ** | |||||||
5171523-C-A | 5303482-C-A | ** | |||||||
22309906-G-A | 20148020-G-A | DYZ19 | ** | ||||||
17385404-C-A | 15273524-C-A | ** | |||||||
23029745-C-A | 20867859-C-A | ** | |||||||
16056029-C-A | 13944149-C-A | ** | |||||||
14614635-C-A | 12502833-C-A | ** | |||||||
3706908-C-A | 3838867-C-A | ** | |||||||
4103780-C-A | 4235739-C-A | ** | |||||||
6671729-C-A | 6803688-C-A | ** | |||||||
28777717-C-A | 26631570-C-A | ** | |||||||
10962733-C-A | ** | ||||||||
10983157-G-A | FT178452 | ** | |||||||
10983181-C-T | ** | ||||||||
10983212-T-A | ** | ||||||||
10983218-C-T | ** | ||||||||
16931693-G-T | 14819813-G-T | ** | |||||||
15928398-G-TT | 13816518-G-TT | ** | |||||||
18059637-C-A | 15947757-C-A | ** | |||||||
10031282-C-A | 10193673-C-A | ** | |||||||
22210395-T-A | 20048509-T-A | ** | |||||||
27861907-A-C | 25715760-A-C | P1_Y2 | ** | ||||||
15985502-C-A | 13873622-C-A | ** | |||||||
22247006-G-T | 20085120-G-T | DYZ19 | ** | ||||||
14284062-C-A | 12163356-C-A | ** | |||||||
28500220-C-A | 26354073-C-A | FTA29648 | ** | ||||||
16214237-G-A | 14102357-G-A | ** | |||||||
3439994-C-A | 3571953-C-A | ** | |||||||
10768595-C-T | ** | ||||||||
9965287-C-A | 10127678-C-A | ** | |||||||
56835581-G-A | ** | ||||||||
3598925-C-A | 3730884-C-A | ** | |||||||
7084369-C-T | 7216328-C-T | ** | |||||||
23142973-C-A | 20981087-C-A | ** | |||||||
10850552-GTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-G | ** | ||||||||
5644477-C-A | 5776436-C-A | ** | |||||||
10860863-C-A | ** | ||||||||
11022121-CA-C | ** | ||||||||
11022133-T-A | ** | ||||||||
8110697-C-A | 8242656-C-A | FTB57632 | ** | ||||||
14180663-C-A | 12059957-C-A | ** | |||||||
23786566-C-A | 21624680-C-A | ** | |||||||
21018973-A-AG | 18857087-A-AG | P4_Dst | ** | ||||||
19122112-C-A | 17010232-C-A | ** | |||||||
11650912-T-G | DYZ17 | ** | |||||||
23200783-C-A | 21038897-C-A | ** | |||||||
7338771-A-G | 7470730-A-G | ** | |||||||
7313161-T-C | 7445120-T-C | ** | |||||||
15432773-C-A | 13320893-C-A | ** | |||||||
5976986-C-A | 6108945-C-A | ** | |||||||
6626709-C-A | 6758668-C-A | ** | |||||||
56844489-G-T | ** | ||||||||
15894531-C-A | 13782651-C-A | ** | |||||||
5367012-C-A | 5498971-C-A | ** | |||||||
18625401-G-C | 16513521-G-C | ** | |||||||
6403173-G-C | 6535132-G-C | ** | |||||||
6403183-T-A | 6535142-T-A | ** | |||||||
14067026-C-A | 11946320-C-A | ** | |||||||
10878293-T-A | ** | ||||||||
28608592-C-A | 26462445-C-A | ** | |||||||
18990976-C-A | 16879096-C-A | ** | |||||||
4951600-C-A | 5083559-C-A | ** | |||||||
10647987-C-A | ** | ||||||||
17755868-C-A | 15643988-C-A | ** | |||||||
10773410-C-A | ** | ||||||||
17831254-A-G | 15719374-A-G | ** | |||||||
4243765-C-A | 4375724-C-A | ** | |||||||
13491801-C-A | 11336125-C-A | ** | |||||||
14609798-TC-T | 12498000-TC-T | ** | |||||||
22602353-C-A | 20440467-C-A | ** | |||||||
7281866-C-A | 7413825-C-A | ** | |||||||
13710044-G-T | 11554368-G-T | DYZ17 | ** | ||||||
28614214-C-A | 26468067-C-A | ** | |||||||
14716767-C-A | 12604835-C-A | ** | |||||||
16493114-C-A | 14381234-C-A | ** | |||||||
6765726-C-A | 6897685-C-A | ** | |||||||
4605012-C-A | 4736971-C-A | ** | |||||||
9936402-C-A | 10098793-C-A | ** | |||||||
8679322-C-A | 8811281-C-A | ** | |||||||
14555119-C-A | 12443320-C-A | ** | |||||||
18190647-G-T | 16078767-G-T | ** | |||||||
10809295-C-A | ** | ||||||||
10022117-C-A | 10184508-C-A | ** | |||||||
14076076-C-A | 11955370-C-A | ** | |||||||
8709995-C-A | 8841954-C-A | ** | |||||||
22247009-C-A | 20085123-C-A | DYZ19 | ** | ||||||
22247011-T-A | 20085125-T-A | DYZ19 | ** | ||||||
8901074-C-A | 9033033-C-A | ** | |||||||
9941511-C-A | 10103902-C-A | ** | |||||||
13643435-C-A | 11487759-C-A | ** | |||||||
10878298-C-T | ** | ||||||||
10878334-C-T | ** | ||||||||
10878335-A-G | ** | ||||||||
14549550-C-A | 12437751-C-A | ** | |||||||
6699062-C-T | 6831021-C-T | ** | |||||||
14425541-C-A | 12304816-C-A | ** | |||||||
7504759-G-T | 7636718-G-T | IR1_L | ** | ||||||
15860231-C-A | 13748351-C-A | ** | |||||||
17489780-C-A | 15377900-C-A | ** | |||||||
7424411-C-A | 7556370-C-A | ** | |||||||
19416461-C-A | 17304581-C-A | ** | |||||||
4960419-C-A | 5092378-C-A | ** | |||||||
16048076-C-A | 13936196-C-A | ** | |||||||
16464702-C-A | 14352822-C-A | ** | |||||||
14451225-C-A | 12330498-C-A | ** | |||||||
10920403-G-T | ** | ||||||||
2788387-A-G | 2920346-A-G | ** | |||||||
2967248-C-A | 3099207-C-A | ** | |||||||
2970034-C-A | 3101993-C-A | ** | |||||||
3045864-C-A | 3177823-C-A | ** | |||||||
3047418-C-A | 3179377-C-A | ** | |||||||
3085368-G-T | 3217327-G-T | ** | |||||||
3097429-C-A | 3229388-C-A | ** | |||||||
3218802-G-T | 3350761-G-T | ** | |||||||
3257112-C-A | 3389071-C-A | ** | |||||||
3279556-C-A | 3411515-C-A | ** | |||||||
3373816-T-C | 3505775-T-C | ** | |||||||
3440294-C-A | 3572253-C-A | ** | |||||||
3500485-C-A | 3632444-C-A | FTB78670 | ** | ||||||
3500539-T-C | 3632498-T-C | ** | |||||||
3552273-T-TGGTAA | 3684232-T-TGGTAA | ** | |||||||
3641385-C-A | 3773344-C-A | ** | |||||||
3702856-G-T | 3834815-G-T | ** | |||||||
3825050-G-T | 3957009-G-T | ** | |||||||
3828854-G-T | 3960813-G-T | ** | |||||||
3957675-A-G | 4089634-A-G | ** | |||||||
3998996-A-AGTCT | 4130955-A-AGTCT | ** | |||||||
4078436-G-T | 4210395-G-T | ** | |||||||
4087812-C-A | 4219771-C-A | ** | |||||||
4136661-C-T | 4268620-C-T | ** | |||||||
4201713-T-C | 4333672-T-C | ** | |||||||
4229500-T-G | 4361459-T-G | ** | |||||||
4374801-T-C | 4506760-T-C | ** | |||||||
4408275-T-C | 4540234-T-C | ** | |||||||
4438546-C-A | 4570505-C-A | ** | |||||||
4473611-C-T | 4605570-C-T | ** | |||||||
4474305-C-A | 4606264-C-A | ** | |||||||
4557442-G-A | 4689401-G-A | ** | |||||||
4601746-T-A | 4733705-T-A | ** | |||||||
4609595-C-A | 4741554-C-A | ** | |||||||
4616636-A-T | 4748595-A-T | ** | |||||||
4672283-C-A | 4804242-C-A | ** | |||||||
4873972-C-A | 5005931-C-A | ** | |||||||
4874987-G-T | 5006946-G-T | ** | |||||||
4887888-C-A | 5019847-C-A | ** | |||||||
5127219-G-A | 5259178-G-A | ** | |||||||
5213793-C-A | 5345752-C-A | ** | |||||||
5260149-C-T | 5392108-C-T | ** | |||||||
5294451-T-A | 5426410-T-A | ** | |||||||
5335769-C-A | 5467728-C-A | ** | |||||||
5368323-C-T | 5500282-C-T | ** | |||||||
5577482-G-C | 5709441-G-C | ** | |||||||
5601694-C-A | 5733653-C-A | ** | |||||||
5692357-C-A | 5824316-C-A | ** | |||||||
5698533-C-T | 5830492-C-T | ** | |||||||
5698543-G-T | 5830502-G-T | ** | |||||||
5782001-T-C | 5913960-T-C | ** | |||||||
5841974-G-A | 5973933-G-A | ** | |||||||
5911386-G-T | 6043345-G-T | ** | |||||||
5992702-C-T | 6124661-C-T | ** | |||||||
6011579-C-A | 6143538-C-A | ** | |||||||
6012001-G-A | 6143960-G-A | ** | |||||||
6038313-A-G | 6170272-A-G | ** | |||||||
6064191-T-A | 6196150-T-A | FTA48193 | 8×A | ** | |||||
6090195-G-A | 6222154-G-A | ** | |||||||
6090197-A-G | 6222156-A-G | ** | |||||||
6090821-C-A | 6222780-C-A | ** | |||||||
6346082-TTATATATATATATATATATATATA-T | 6478041-TTATATATATATATATATATATATA-T | 21×TA | ** | ||||||
6352604-T-A | 6484563-T-A | ** | |||||||
6384356-T-C | 6516315-T-C | ** | |||||||
6401606-C-T | 6533565-C-T | ** | |||||||
6401612-A-G | 6533571-A-G | ** | |||||||
6403167-G-C | 6535126-G-C | ** | |||||||
6403177-T-G | 6535136-T-G | ** | |||||||
6403181-C-T | 6535140-C-T | ** | |||||||
6454730-T-C | 6586689-T-C | Y2739 FGC10623 | ** | ||||||
6460024-C-A | 6591983-C-A | ** | |||||||
6481427-G-T | 6613386-G-T | ** | |||||||
6523860-C-A | 6655819-C-A | ** | |||||||
6626740-C-A | 6758699-C-A | ** | |||||||
6691385-G-T | 6823344-G-T | ** | |||||||
6756745-T-C | 6888704-T-C | ** | |||||||
6773139-C-A | 6905098-C-A | ** | |||||||
6881158-ACAGTTATGTTCCCTCTTCAAACAG-A | 7013117-ACAGTTATGTTCCCTCTTCAAACAG-A | ** | |||||||
6948301-G-T | 7080260-G-T | ** | |||||||
6971665-A-G | 7103624-A-G | ** | |||||||
7029911-C-A | 7161870-C-A | ** | |||||||
7084370-A-G | 7216329-A-G | ** | |||||||
7111766-C-T | 7243725-C-T | ** | |||||||
7138322-G-A | 7270281-G-A | ** | |||||||
7140863-C-G | 7272822-C-G | B402 | ** | ||||||
7175785-C-A | 7307744-C-A | ** | |||||||
7175796-T-C | 7307755-T-C | ** | |||||||
7201361-C-G | 7333320-C-G | ** | |||||||
7201443-C-A | 7333402-C-A | ** | |||||||
7236533-CT-C | 7368492-CT-C | ** | |||||||
7236548-T-C | 7368507-T-C | ** | |||||||
7269803-C-T | 7401762-C-T | ** | |||||||
7269807-G-A | 7401766-G-A | ** | |||||||
7269811-G-A | 7401770-G-A | FT64989 | ** | ||||||
7269813-A-G | 7401772-A-G | ** | |||||||
7288002-T-C | 7419961-T-C | ** | |||||||
7294051-G-C | 7426010-G-C | ** | |||||||
7303830-C-A | 7435789-C-A | ** | |||||||
7313153-C-CAA | 7445112-C-CAA | ** | |||||||
7313180-G-A | 7445139-G-A | ** | |||||||
7313182-A-G | 7445141-A-G | ** | |||||||
7348891-T-C | 7480850-T-C | ** | |||||||
7348914-G-A | 7480873-G-A | ** | |||||||
7424467-C-T | 7556426-C-T | ** | |||||||
7578050-C-T | 7710009-C-T | ** | |||||||
7630200-C-A | 7762159-C-A | ** | |||||||
7709394-A-G | 7841353-A-G | ** | |||||||
7757233-C-A | 7889192-C-A | ** | |||||||
7783085-C-A | 7915044-C-A | ** | |||||||
7894652-C-G | 8026611-C-G | ** | |||||||
7894655-C-T | 8026614-C-T | ** | |||||||
7894662-G-A | 8026621-G-A | ** | |||||||
7894663-C-T | 8026622-C-T | ** | |||||||
7894674-T-A | 8026633-T-A | ** | |||||||
7996309-C-A | 8128268-C-A | ** | |||||||
8075216-A-G | 8207175-A-G | ** | |||||||
8679347-C-T | 8811306-C-T | ** | |||||||
8692064-C-A | 8824023-C-A | Y87744 | ** | ||||||
8692120-C-A | 8824079-C-A | ** | |||||||
8751225-TTA-T | 8883184-TTA-T | ** | |||||||
9116967-G-A | ** | ||||||||
9125547-C-T | ** | ||||||||
8971770-G-A | 9134161-G-A | ** | |||||||
9511908-T-C | 9674299-T-C | ** | |||||||
9736886-T-A | 9899277-T-A | IR3_Prx | ** | ||||||
9888339-C-A | 10050730-C-A | ** | |||||||
9916641-C-T | 10079032-C-T | ** | |||||||
9916650-C-G | 10079041-C-G | ** | |||||||
9965248-C-A | 10127639-C-A | ** | |||||||
9990181-G-T | 10152572-G-T | ** | |||||||
10004850-T-C | 10167241-T-C | ** | |||||||
10033184-C-A | 10195575-C-A | ** | |||||||
10051537-A-C | 10213928-A-C | ** | |||||||
10060631-A-T | 10223022-A-T | ** | |||||||
10624450-C-T | ** | ||||||||
10624455-C-G | ** | ||||||||
10624460-A-G | ** | ||||||||
10624468-C-T | ** | ||||||||
10624469-A-G | ** | ||||||||
10747098-A-G | ** | ||||||||
10749094-C-A | ** | ||||||||
10750884-C-A | ** | ||||||||
10760053-T-C | ** | ||||||||
10763478-C-T | ** | ||||||||
10770126-C-G | ** | ||||||||
10773454-G-A | FT91667 | ** | |||||||
10792812-C-A | ** | ||||||||
10796953-G-A | ** | ||||||||
10806526-C-A | ** | ||||||||
10816409-T-C | ** | ||||||||
10818885-C-A | ** | ||||||||
10825626-C-G | ** | ||||||||
10825641-C-T | ** | ||||||||
10825662-C-G | ** | ||||||||
10825668-A-ATTCTT | ** | ||||||||
10829611-G-T | ** | ||||||||
10830516-C-A | ** | ||||||||
10847617-C-A | ** | ||||||||
10851603-C-A | FT27333 | ** | |||||||
10859179-G-T | ** | ||||||||
10875705-C-A | ** | ||||||||
10875886-C-A | ** | ||||||||
10896041-T-C | ** | ||||||||
10901707-G-T | FT435984 | ** | |||||||
10908263-G-A | FT220734 | ** | |||||||
10919283-G-T | ** | ||||||||
10919388-G-T | ** | ||||||||
10919474-G-C | ** | ||||||||
10939335-A-G | ** | ||||||||
10939344-T-TTTCAC | ** | ||||||||
10939348-T-A | ** | ||||||||
10944367-C-A | ** | ||||||||
10946054-C-A | ** | ||||||||
10947203-C-A | ** | ||||||||
10958475-G-A | ** | ||||||||
10965336-C-CTCCAT | ** | ||||||||
10983197-A-G | ** | ||||||||
10983205-C-T | ** | ||||||||
10983222-G-A | ** | ||||||||
10983377-A-T | ** | ||||||||
10985191-C-CTGCAT | ** | ||||||||
10985218-C-A | ** | ||||||||
11009581-C-A | ** | ||||||||
11018017-C-A | ** | ||||||||
11022103-T-TTCAAC | ** | ||||||||
11038059-A-AC | ** | ||||||||
11038062-TTCCACC-T | ** | ||||||||
13259117-A-G | 11103441-A-G | ** | |||||||
13316146-C-A | 11160470-C-A | ** | |||||||
13328782-A-G | 11173106-A-G | ** | |||||||
13335354-C-A | 11179678-C-A | ** | |||||||
13463905-C-A | 11308229-C-A | ** | |||||||
13475581-A-G | 11319905-A-G | ** | |||||||
13585003-C-A | 11429327-C-A | ** | |||||||
13624119-C-T | 11468443-C-T | ** | |||||||
13633808-A-T | 11478132-A-T | ** | |||||||
13710054-A-G | 11554378-A-G | DYZ17 | ** | ||||||
13710058-A-G | 11554382-A-G | DYZ17 | ** | ||||||
11649550-A-T | DYZ17 | ** | |||||||
11650886-A-G | DYZ17 | ** | |||||||
11650894-A-G | DYZ17 | ** | |||||||
11650905-A-T | DYZ17 | ** | |||||||
11650911-C-T | DYZ17 | ** | |||||||
11650913-A-C | DYZ17 | ** | |||||||
11650932-G-A | DYZ17 | ** | |||||||
11651780-C-A | DYZ17 | ** | |||||||
11654107-C-A | DYZ17 | ** | |||||||
11656391-A-G | DYZ17 | ** | |||||||
11666372-A-G | DYZ17 | ** | |||||||
11673406-T-G | DYZ17 | ** | |||||||
13804415-A-T | 11683709-A-T | DYZ17 | ** | ||||||
13824579-T-A | 11703873-T-A | DYZ17 | ** | ||||||
13824581-A-T | 11703875-A-T | DYZ17 | ** | ||||||
13892806-C-A | 11772100-C-A | ** | |||||||
13893366-T-C | 11772660-T-C | ** | |||||||
13900259-C-A | 11779553-C-A | ** | |||||||
13910074-C-A | 11789368-C-A | Y137222 | ** | ||||||
13940382-T-A | 11819676-T-A | ** | |||||||
14000397-C-A | 11879691-C-A | ** | |||||||
14020134-A-G | 11899428-A-G | ** | |||||||
14055660-C-A | 11934954-C-A | ** | |||||||
14118355-T-G | 11997649-T-G | ** | |||||||
14118359-T-A | 11997653-T-A | ** | |||||||
14146880-C-A | 12026174-C-A | ** | |||||||
14198284-C-A | 12077578-C-A | ** | |||||||
14218573-A-G | 12097867-A-G | ** | |||||||
14273547-G-T | 12152841-G-T | ** | |||||||
14301928-CA-C | 12181222-CA-C | ** | |||||||
14341373-C-T | 12220668-C-T | ** | |||||||
14341374-A-G | 12220669-A-G | ** | |||||||
14341379-T-G | 12220674-T-G | ** | |||||||
14341388-C-T | 12220683-C-T | ** | |||||||
14341416-G-A | 12220711-G-A | ** | |||||||
14345045-A-T | 12224340-A-T | ** | |||||||
14384604-G-T | 12263900-G-T | ** | |||||||
14431400-G-A | 12310673-G-A | ** | |||||||
14448070-C-A | 12327343-C-A | ** | |||||||
14448100-C-A | 12327373-C-A | ** | |||||||
14495811-G-T | 12384008-G-T | ** | |||||||
14505321-A-G | 12393526-A-G | ** | |||||||
14505430-C-A | 12393635-C-A | ** | |||||||
14517548-C-A | 12405749-C-A | ** | |||||||
14537697-T-C | 12425898-T-C | ** | |||||||
14557731-C-A | 12445932-C-A | ** | |||||||
14610596-C-A | 12498798-C-A | ** | |||||||
14667961-C-A | 12556027-C-A | ** | |||||||
14675015-G-T | 12563081-G-T | ** | |||||||
14675185-C-A | 12563251-C-A | ** | |||||||
14714827-C-A | 12602894-C-A | ** | |||||||
14764927-T-C | 12652996-T-C | ** | |||||||
14994165-C-A | 12882250-C-A | ** | |||||||
15034725-C-T | 12922813-C-T | ** | |||||||
15114738-C-A | 13002825-C-A | ** | |||||||
15178500-G-A | 13066586-G-A | ** | |||||||
15283453-C-A | 13171552-C-A | ** | |||||||
15367014-G-T | 13255134-G-T | ** | |||||||
15397659-C-A | 13285779-C-A | ** | |||||||
15432747-C-A | 13320867-C-A | ** | |||||||
15442395-T-C | 13330515-T-C | ** | |||||||
15445423-C-A | 13333543-C-A | ** | |||||||
15503400-A-G | 13391520-A-G | ** | |||||||
15606466-G-A | 13494586-G-A | ** | |||||||
15622545-C-A | 13510665-C-A | ** | |||||||
15671095-G-T | 13559215-G-T | ** | |||||||
15728787-G-A | 13616907-G-A | ** | |||||||
15735428-A-G | 13623548-A-G | ** | |||||||
15764031-C-T | 13652151-C-T | ** | |||||||
15957799-C-A | 13845919-C-A | ** | |||||||
15986605-T-A | 13874725-T-A | ** | |||||||
16008025-T-TCTGTC | 13896145-T-TCTGTC | ** | |||||||
16073113-T-C | 13961233-T-C | ** | |||||||
16146807-A-AGACAG | 14034927-A-AGACAG | P8_Dst | ** | ||||||
16246058-G-T | 14134178-G-T | ** | |||||||
16279318-G-T | 14167438-G-T | ** | |||||||
16309386-C-A | 14197506-C-A | ** | |||||||
16351784-T-A | 14239904-T-A | ** | |||||||
16351800-G-T | 14239920-G-T | ** | |||||||
16428581-A-G | 14316701-A-G | ** | |||||||
16428682-C-A | 14316802-C-A | ** | |||||||
16572858-C-A | 14460978-C-A | ** | |||||||
16619815-C-A | 14507935-C-A | ** | |||||||
16652179-C-A | 14540299-C-A | ** | |||||||
16676684-C-A | 14564804-C-A | ** | |||||||
16833392-C-A | 14721512-C-A | ** | |||||||
16914477-A-C | 14802597-A-C | ** | |||||||
16941656-C-A | 14829776-C-A | ** | |||||||
17098615-C-T | 14986735-C-T | ** | |||||||
17111187-C-A | 14999307-C-A | ** | |||||||
17130001-G-A | 15018121-G-A | ** | |||||||
17372567-C-A | 15260687-C-A | ** | |||||||
17374600-G-T | 15262720-G-T | ** | |||||||
17378987-AG-A | 15267107-AG-A | ** | |||||||
17426820-G-T | 15314940-G-T | ** | |||||||
17426835-T-A | 15314955-T-A | ** | |||||||
17523990-TG-T | 15412110-TG-T | ** | |||||||
17523997-T-G | 15412117-T-G | ** | |||||||
17524004-A-G | 15412124-A-G | ** | |||||||
17549410-C-A | 15437530-C-A | ** | |||||||
17605098-G-T | 15493218-G-T | ** | |||||||
17644298-T-C | 15532418-T-C | ** | |||||||
17795641-T-A | 15683761-T-A | ** | |||||||
17839813-C-A | 15727933-C-A | ** | |||||||
17839933-C-A | 15728053-C-A | ** | |||||||
17916094-A-C | 15804214-A-C | ** | |||||||
17916159-C-A | 15804279-C-A | ** | |||||||
18035840-G-A | 15923960-G-A | ** | |||||||
18057344-G-T | 15945464-G-T | ** | |||||||
18151896-G-A | 16040016-G-A | ** | |||||||
18398141-A-G | 16286261-A-G | P6_Gap | ** | ||||||
18565928-CTTG-C | 16454048-CTTG-C | ** | |||||||
18614168-G-A | 16502288-G-A | ** | |||||||
18625389-T-C | 16513509-T-C | ** | |||||||
18625402-T-C | 16513522-T-C | ** | |||||||
18626107-GT-G | 16514227-GT-G | ** | |||||||
18736194-T-C | 16624314-T-C | ** | |||||||
18736196-A-G | 16624316-A-G | FT222494 | ** | ||||||
18736198-G-C | 16624318-G-C | ** | |||||||
18736203-C-T | 16624323-C-T | ** | |||||||
18736215-G-A | 16624335-G-A | ** | |||||||
18736214-TG-T | 16624334-TG-T | ** | |||||||
18736221-T-A | 16624341-T-A | ** | |||||||
18792617-T-G | 16680737-T-G | ** | |||||||
18793833-G-T | 16681953-G-T | ** | |||||||
18848771-G-T | 16736891-G-T | ** | |||||||
18950691-C-A | 16838811-C-A | ** | |||||||
19042459-C-A | 16930579-C-A | ** | |||||||
19071927-A-G | 16960047-A-G | ** | |||||||
19355389-A-T | 17243509-A-T | ** | |||||||
19355395-T-G | 17243515-T-G | ** | |||||||
19355397-C-A | 17243517-C-A | ** | |||||||
19355400-T-C | 17243520-T-C | ** | |||||||
19355410-A-C | 17243530-A-C | ** | |||||||
19391178-C-A | 17279298-C-A | ** | |||||||
19817575-G-A | 17705695-G-A | P5_Prx | ** | ||||||
19818815-A-AG | 17706935-A-AG | P5_Prx | ** | ||||||
19986669-A-G | 17874789-A-G | P5_Prx | ** | ||||||
20050979-T-A | 17939099-T-A | P5_Prx | ** | ||||||
20125654-G-A | 18013774-G-A | P5_Dst | ** | ||||||
20142840-G-T | 18030960-G-T | P5_Dst | ** | ||||||
20265277-A-ACACAG | 18103391-A-ACACAG | P5_Dst | ** | ||||||
20370055-T-TGACAG | 18208169-T-TGACAG | P5_Dst | ** | ||||||
20376104-C-T | 18214218-C-T | P5_Dst | ** | ||||||
20433615-A-G | 18271729-A-G | P5_Dst | ** | ||||||
20473079-G-C | 18311193-G-C | P5_Dst | ** | ||||||
20873702-A-C | 18711816-A-C | P4_Dst | ** | ||||||
20873708-ATT-A | 18711822-ATT-A | P4_Dst | ** | ||||||
21151774-A-C | 18989888-A-C | ** | |||||||
21220921-C-A | 19059035-C-A | ** | |||||||
21248055-C-G | 19086169-C-G | ** | |||||||
21324302-G-C | 19162416-G-C | ** | |||||||
21340295-A-G | 19178409-A-G | ** | |||||||
21340315-C-G | 19178429-C-G | ** | |||||||
21340320-T-C | 19178434-T-C | ** | |||||||
21368456-C-A | 19206570-C-A | ** | |||||||
21371119-C-A | 19209233-C-A | ** | |||||||
21394400-A-G | 19232514-A-G | ** | |||||||
21459407-C-A | 19297521-C-A | ** | |||||||
21681481-T-G | 19519595-T-G | ** | |||||||
21747179-G-T | 19585293-G-T | ** | |||||||
21770340-C-A | 19608454-C-A | ** | |||||||
21821536-A-G | 19659650-A-G | ** | |||||||
21833946-C-A | 19672060-C-A | ** | |||||||
21863592-A-T | 19701706-A-T | ** | |||||||
21885815-C-A | 19723929-C-A | ** | |||||||
21953278-T-A | 19791392-T-A | Y20283 | ** | ||||||
22077161-A-T | 19915275-A-T | ** | |||||||
22134290-A-C | 19972404-A-C | ** | |||||||
22146637-T-C | 19984751-T-C | ** | |||||||
22212046-T-TAACA | 20050160-T-TAACA | ** | |||||||
22247034-C-A | 20085148-C-A | DYZ19 | ** | ||||||
22591540-T-G | 20429654-T-G | ** | |||||||
22613989-C-A | 20452103-C-A | ** | |||||||
22662175-CT-C | 20500289-CT-C | 8×T | ** | ||||||
22690070-T-G | 20528184-T-G | ** | |||||||
22811801-C-A | 20649915-C-A | ** | |||||||
22851368-C-A | 20689482-C-A | ** | |||||||
22868902-C-A | 20707016-C-A | ** | |||||||
22871440-G-C | 20709554-G-C | ** | |||||||
22885019-A-G | 20723133-A-G | ** | |||||||
22950111-A-G | 20788225-A-G | ** | |||||||
22956181-T-C | 20794295-T-C | ** | |||||||
22972733-G-A | 20810847-G-A | ** | |||||||
22972738-C-G | 20810852-C-G | ** | |||||||
22972769-A-G | 20810883-A-G | ** | |||||||
22979477-C-A | 20817591-C-A | ** | |||||||
23341695-C-A | 21179809-C-A | FT210854 | ** | ||||||
23441527-C-A | 21279641-C-A | ** | |||||||
23514306-G-A | 21352420-G-A | ** | |||||||
23514309-C-T | 21352423-C-T | ** | |||||||
23600152-G-T | 21438266-G-T | ** | |||||||
23633420-G-A | 21471534-G-A | ** | |||||||
23779782-G-T | 21617896-G-T | ** | |||||||
24221239-G-T | 22075092-G-T | P3_b1 | ** | ||||||
24315736-C-A | 22169589-C-A | P3_t1 | ** | ||||||
24409092-G-T | 22262945-G-T | ** | |||||||
24458664-G-T | 22312517-G-T | ** | |||||||
24725913-G-T | 22579766-G-T | P3_b2 | ** | ||||||
25466805-C-A | 23320658-C-A | P2_r2 | ** | ||||||
26073031-A-ATG | 23926884-A-ATG | P1_Y1 | ** | ||||||
26314667-C-T | 24168520-C-T | P1_Y1 | ** | ||||||
26314687-C-A | 24168540-C-A | P1_Y1 | ** | ||||||
26437119-G-T | 24290972-G-T | P1_Y1 | ** | ||||||
27898409-T-C | 25752262-T-C | P1_Y2 | ** | ||||||
27915982-A-TTTT | 25769835-A-TTTT | P1_Y2 | ** | ||||||
28482818-T-G | 26336671-T-G | ** | |||||||
28498199-C-A | 26352052-C-A | ** | |||||||
28514548-C-A | 26368401-C-A | ** | |||||||
28533771-C-T | 26387624-C-T | ** | |||||||
28557972-C-A | 26411825-C-A | ** | |||||||
28568115-A-G | 26421968-A-G | ** | |||||||
28582809-A-T | 26436662-A-T | ** | |||||||
28611564-A-C | 26465417-A-C | ** | |||||||
28645979-C-A | 26499832-C-A | ** | |||||||
28700772-C-CTGT | 26554625-C-CTGT | ** | |||||||
28712160-T-C | 26566013-T-C | ** | |||||||
28732083-G-A | 26585936-G-A | ** | |||||||
28744915-C-A | 26598768-C-A | ** | |||||||
28771709-G-A | 26625562-G-A | ** | |||||||
28775306-A-T | 26629159-A-T | ** | |||||||
28812327-AT-A | 26666180-AT-A | ** | |||||||
25135-G-C | ** | ||||||||
10035949-A-G | 10198340-A-G | *** | |||||||
10035952-G-A | 10198343-G-A | *** | |||||||
13845351-T-A | 11724645-T-A | DYZ17 | *** | ||||||
14286806-TGC-T | 12166100-TGC-T | *** | |||||||
7657652-TAC-T | 7789611-TAC-T | *** | |||||||
24092061-T-C | 21945914-T-C | P3_b1 | *** | ||||||
25130526-T-C | 22984379-T-C | g1 | *** | ||||||
58978584-G-C | 56832437-G-C | *** | |||||||
18443538-C-T | 16331658-C-T | P6_Dst | *** | ||||||
58982491-C-G,T | 56836344-C-G,T | *** | |||||||
16692071-C-A | 14580191-C-A | 9×A | *** | ||||||
14767018-CTTT-C | 12655087-CTTT-C | 14×T | *** | ||||||
10831641-C-A | *** | ||||||||
14788018-G-C | 12676089-G-C | *** | |||||||
3991876-C-A | 4123835-C-A | *** | |||||||
10772471-C-T | *** | ||||||||
5107688-C-A | 5239647-C-A | *** | |||||||
23414226-C-A | 21252340-C-A | *** | |||||||
10887320-C-A | *** | ||||||||
21409244-C-A | 19247358-C-A | *** | |||||||
19966688-AAAGAAGAAGAAGAAG-A,AAAG | 17854808-AAAGAAGAAGAAGAAG-A,AAAG | P5_Prx | 26×AAG | *** | |||||
10816502-G-T | *** | ||||||||
11666338-A-G | FT354245 | DYZ17 | *** | ||||||
15400145-C-A | 13288265-C-A | *** | |||||||
22949743-C-A | 20787857-C-A | *** | |||||||
13459474-C-A | 11303798-C-A | *** | |||||||
28800620-C-A | 26654473-C-A | *** | |||||||
14743732-A-T | 12631801-A-T | *** | |||||||
4756362-T-C | 4888321-T-C | *** | |||||||
8130388-G-T | 8262347-G-T | *** | |||||||
8135418-G-T | 8267377-G-T | *** | |||||||
8725360-G-A | 8857319-G-A | *** | |||||||
9875030-C-A | 10037421-C-A | *** | |||||||
9934588-A-G | 10096979-A-G | *** | |||||||
10686535-C-A | *** | ||||||||
10691369-T-TTAATC | *** | ||||||||
10824164-T-TTGTATTCGGGTTAA | *** | ||||||||
10824195-T-A | *** | ||||||||
10864584-C-A | *** | ||||||||
10938286-G-T | FT437344 | *** | |||||||
10987796-TTCCCC-T | *** | ||||||||
11004470-CATTCC-A,C | *** | ||||||||
11030133-C-T | *** | ||||||||
13218416-G-A | 11062740-G-A | *** | |||||||
13457724-T-A | 11302048-T-A | *** | |||||||
11666327-G-A | DYZ17 | *** | |||||||
11666337-C-G | DYZ17 | *** | |||||||
11666352-T-G | DYZ17 | *** | |||||||
11666356-T-C | DYZ17 | *** | |||||||
11666362-T-G | DYZ17 | *** | |||||||
11666366-A-T | DYZ17 | *** | |||||||
13833185-T-C | 11712479-T-C | DYZ17 | *** | ||||||
13833188-T-TCA | 11712482-T-TCA | DYZ17 | *** | ||||||
13845348-A-G | 11724642-A-G | DYZ17 | *** | ||||||
13932765-T-C | 11812059-T-C | *** | |||||||
14272495-C-A | 12151789-C-A | *** | |||||||
14376336-G-A | 12255632-G-A | *** | |||||||
16309559-AAGACTCAGTCTCAAAAAAAAAAAAAAAAATACTAT-A,AAGACTCAGTCTCAAAAAAAAAAAAAAATACTAT | 14197679-AAGACTCAGTCTCAAAAAAAAAAAAAAAAATACTAT-A,AAGACTCAGTCTCAAAAAAAAAAAAAAATACTAT | *** | |||||||
17279785-A-G | 15167905-A-G | *** | |||||||
17944818-G-A | 15832938-G-A | *** | |||||||
18398002-T-C | 16286122-T-C | P6_Gap | *** | ||||||
18893551-C-G | 16781671-C-G | *** | |||||||
19438573-G-T | 17326693-G-T | *** | |||||||
21172120-T-A | 19010234-T-A | *** | |||||||
21172130-A-G | 19010244-A-G | *** | |||||||
21323326-C-A | 19161440-C-A | *** | |||||||
22601947-C-A | 20440061-C-A | *** | |||||||
22868034-C-A | 20706148-C-A | *** | |||||||
23446099-C-A | 21284213-C-A | *** | |||||||
23475461-C-T | 21313575-C-T | *** | |||||||
23640227-T-C | 21478341-T-C | *** | |||||||
23832879-C-A | 21670993-C-A | *** | |||||||
24392455-C-A | 22246308-C-A | *** | |||||||
27127657-TCTTC-T | 24981510-TCTTC-T | P1_g3 | 7×CTTC | *** | |||||
56836320-T-A,G | *** | ||||||||
56836791-T-A | *** | ||||||||
56838539-T-A | *** | ||||||||
56838540-C-A | *** | ||||||||
56838551-T-C | *** | ||||||||
56840177-T-A | *** | ||||||||
56840180-C-A | *** | ||||||||
56861670-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.