Tree Position

A0-T-YP2191 > P305[A1] > A1b > BT/A1b2 > M168/PF1416[CT] > M145/P205/PF144 > M96/PF1823 > P147 > P177 > M215 > M35 > Z827 > PF1957 > PF1962

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	Kane-BY3 IN30005
13819959-T-TGAATG	11699253-T-TGAATG						14×GAATG	+
24424305-T-C	22278158-T-C		PF6756			Y		+
14372878-C-G	12252174-C-G		YP5731		Y	Y		+
23832828-T-C	21670942-T-C					Y		+
10044263-G-A	10206654-G-A		FGC77701					+
17083085-G-A	14971205-G-A		YP5399		Y	Y		+
22262065-C-T	20100179-C-T			DYZ19				+
22262165-A-G	20100279-A-G			DYZ19				+
23653623-A-G	21491737-A-G				Y			+
25114071-G-A	22967924-G-A		FGC80209	g1				+
9806714-A-G	9969105-A-G		FGC10522		Y	Y		+
16988033-T-TA	14876153-T-TA						8×A	+
23488834-T-TAAAAAAAA	21326948-T-TAAAAAAAA						30×A	+
25200987-GAAGAAAGAAAGAAAGAAAGA-G	23054840-GAAGAAAGAAAGAAAGAAAGA-G			g1			14×AAGA	+
20548838-C-T	18386952-C-T			P5_Dst				+
13480775-A-C	11325099-A-C							+
	10961375-C-T							+
16738529-G-T	14626649-G-T		YP5401		Y			+
	56734807-A-G							+
	11644224-A-T							+
4408811-G-A	4540770-G-A							+
25850790-C-T	23704643-C-T		BY226419	P1_Y1				+
14186000-T-G	12065294-T-G		BY34460		Y	Y		+
13624648-G-A	11468972-G-A							+
23200050-C-A	21038164-C-A		YP5407		Y			+
13884836-G-T	11764130-G-T				Y			+
23672294-C-G	21510408-C-G				Y			+
	10869027-C-A		FT91917					+
13469385-A-G	11313709-A-G							+
	10959261-CTCCATTCCATTCCAT-C							+
	10971897-T-TATTCCATTCC							+
16809223-A-AAGAT	14697343-A-AAGAT						6×AGAT	+
22278791-T-G	20116905-T-G			DYZ19				+
	10664773-CCCATTCCATTCCATT-C							+
	10755372-AACTCC-A							+
3561500-CAA-C	3693459-CAA-C						25×A	+
9398613-C-T	9561004-C-T		BY30811		Y	Y		+
18006687-AATTATTATTATT-A	15894807-AATTATTATTATT-A			P7_Gap			11×ATT	+
13469376-T-A	11313700-T-A							+
22886819-G-A	20724933-G-A		FTA22471		Y	Y		+
4402164-G-A	4534123-G-A		FTA54480					+
9398616-C-G	9561007-C-G				Y	Y		+
2722167-C-T	2854126-C-T				Y	Y		+
3035821-ATGTAAG-A	3167780-ATGTAAG-A							+
3098893-G-A	3230852-G-A							+
3248683-G-A	3380642-G-A							+
3258734-A-C	3390693-A-C							+
3347598-G-A	3479557-G-A							+
3374930-C-T	3506889-C-T							+
3375317-A-G	3507276-A-G							+
3433294-T-C	3565253-T-C							+
3561878-C-G	3693837-C-G							+
3641124-T-TTCTTTCTTTCTTTCTTTCTC	3773083-T-TTCTTTCTTTCTTTCTTTCTC							+
3651760-C-T	3783719-C-T							+
3976576-C-T	4108535-C-T							+
4019047-A-T	4151006-A-T							+
4104374-TG-T	4236333-TG-T						8×G	+
4281757-A-T	4413716-A-T							+
4385159-A-G	4517118-A-G							+
4388681-A-C	4520640-A-C							+
4505436-T-G	4637395-T-G							+
4528407-A-G	4660366-A-G							+
4599187-A-T	4731146-A-T							+
4679055-G-A	4811014-G-A							+
5189874-G-A	5321833-G-A							+
5255414-T-C	5387373-T-C							+
5285276-G-A	5417235-G-A							+
5377355-G-A	5509314-G-A							+
5408386-T-C	5540345-T-C							+
5490178-A-T	5622137-A-T							+
5537896-T-A	5669855-T-A							+
5571047-GTTTA-G	5703006-GTTTA-G							+
5571297-G-A	5703256-G-A							+
5682173-A-C	5814132-A-C							+
5693670-C-G	5825629-C-G							+
5745216-A-C	5877175-A-C							+
5780194-A-G	5912153-A-G							+
5892473-A-T	6024432-A-T							+
5951095-T-C	6083054-T-C							+
6092948-C-CTTTTTTT	6224907-C-CTTTTTTT						39×T	+
6488341-A-C	6620300-A-C							+
6584399-G-GT	6716358-G-GT							+
6648835-T-G	6780794-T-G				Y	Y		+
6857922-G-A	6989881-G-A				Y	Y		+
6882959-G-C	7014918-G-C				Y	Y		+
6927422-AG-A	7059381-AG-A							+
7026559-T-A	7158518-T-A				Y			+
7206483-T-A	7338442-T-A				Y	Y		+
7383791-G-A	7515750-G-A				Y	Y		+
7490540-C-T	7622499-C-T			IR1_L				+
7643536-AGGAAAGGAAGGGAAGGGAAGGGAAG-A	7775495-AGGAAAGGAAGGGAAGGGAAGGGAAG-A							+
7715255-AC-A	7847214-AC-A							+
7952008-C-T	8083967-C-T				Y	Y		+
8125050-A-AGAGAG	8257009-A-AGAGAG							+
8193604-G-T	8325563-G-T				Y	Y		+
8607914-C-A	8739873-C-A				Y	Y		+
8809549-C-T	8941508-C-T				Y	Y		+
9000194-G-T	9162585-G-T					Y		+
9038316-T-G	9200707-T-G					Y		+
9083191-A-C	9245582-A-C					Y		+
9203804-G-A	9366195-G-A				Y			+
9317766-TCA-T	9480157-TCA-T							+
9510085-A-G	9672476-A-G							+
9764343-A-AAGGAAGG	9926734-A-AAGGAAGG						10×AAGG	+
9918677-G-T	10081068-G-T				Y			+
10054935-A-G	10217326-A-G							+
	10632636-A-T							+
	10753635-ACT-A							+
	10770350-C-G							+
	10821869-T-TTCCACTCCACTCCACTCCACTCCACTACAC							+
	10886084-A-C							+
	10918965-G-T							+
	10956561-C-CTCCATTCCAT							+
13380354-T-C	11224678-T-C							+
13391284-C-A	11235608-C-A							+
13391285-C-A	11235609-C-A							+
13484062-C-A	11328386-C-A							+
13544477-C-T	11388801-C-T							+
13619590-CT-C	11463914-CT-C						8×T	+
13633770-G-T	11478094-G-T							+
13834720-CGAATG-C	11714014-CGAATG-C						4×GAATG	+
13838421-A-ATAATG	11717715-A-ATAATG						9×GAATG	+
13865036-A-C	11744330-A-C							+
13869816-G-GTGGAATGGAATGGAA	11749110-G-GTGGAATGGAATGGAA						10×TGGAA	+
14114687-C-A	11993981-C-A				Y			+
14384314-C-A	12263610-C-A				Y			+
14421418-T-A	12300693-T-A				Y			+
14425249-G-A	12304524-G-A				Y			+
14531404-G-T	12419605-G-T				Y			+
	12450522-C-CTTTTTTT						41×T	+
14567403-C-A	12455603-C-A				Y			+
14773008-G-T	12661077-G-T				Y	Y		+
14871597-A-G	12759667-A-G				Y	Y		+
15134588-T-C	13022675-T-C				Y	Y		+
15395810-G-C	13283930-G-C				Y			+
15445238-T-C	13333358-T-C				Y			+
15680645-A-G	13568765-A-G				Y			+
15718001-G-GA	13606121-G-GA							+
15718003-AT-A	13606123-AT-A							+
15718005-G-A	13606125-G-A				Y	Y		+
15718010-A-G	13606130-A-G				Y	Y		+
15718014-G-T	13606134-G-T				Y	Y		+
15718018-A-ATTTGAAGATACGC	13606138-A-ATTTGAAGATACGC							+
15909754-C-CATATATATATAT	13797874-C-CATATATATATAT						18×AT	+
16160425-C-T	14048545-C-T			P8_Dst				+
16211224-G-T	14099344-G-T				Y	Y		+
16533408-T-C	14421528-T-C				Y	Y		+
16563877-G-A	14451997-G-A				Y	Y		+
16601630-AATAT-A	14489750-AATAT-A						17×AT	+
16632380-A-G	14520500-A-G				Y	Y		+
16683077-A-T	14571197-A-T				Y			+
16822365-C-G	14710485-C-G				Y	Y		+
16824125-C-T	14712245-C-T				Y	Y		+
16875507-T-A	14763627-T-A				Y	Y		+
17194359-T-C	15082479-T-C				Y	Y		+
17208540-C-T	15096660-C-T				Y	Y		+
17403599-T-C	15291719-T-C				Y	Y		+
17464023-C-T	15352143-C-T				Y	Y		+
17664908-G-T	15553028-G-T				Y	Y		+
17731014-C-CAAAAAAAAAAAAAA	15619134-C-CAAAAAAAAAAAAAA						35×A	+
17923746-A-AAAAGAAAGAAAGAAAGAAAGAAAG	15811866-A-AAAAGAAAGAAAGAAAGAAAGAAAG						11×AAAG	+
17953099-T-A	15841219-T-A				Y	Y		+
18208009-C-T	16096129-C-T				Y	Y		+
18651213-G-A	16539333-G-A				Y			+
18701618-G-GT	16589738-G-GT							+
18874396-C-T	16762516-C-T				Y			+
18954380-T-C	16842500-T-C				Y	Y		+
18961740-T-C	16849860-T-C				Y	Y		+
19042630-G-A	16930750-G-A				Y			+
19054724-C-T	16942844-C-T				Y	Y		+
19121942-T-TG	17010062-T-TG							+
19251160-A-G	17139280-A-G				Y	Y		+
19309460-T-TATATATATATAC	17197580-T-TATATATATATAC						11×AC	+
19360953-T-G	17249073-T-G				Y	Y		+
19418648-G-T	17306768-G-T				Y	Y		+
19771296-G-A	17659416-G-A			P5_Prx				+
19844491-T-G	17732611-T-G			P5_Prx				+
20408593-T-C	18246707-T-C			P5_Dst				+
21248279-A-G	19086393-A-G				Y			+
21267826-G-A	19105940-G-A				Y	Y		+
21335275-A-G	19173389-A-G				Y			+
21401722-G-A	19239836-G-A				Y	Y		+
21431579-G-C	19269693-G-C				Y	Y		+
21465117-G-C	19303231-G-C				Y	Y		+
21488907-A-T	19327021-A-T				Y	Y		+
21492260-A-G	19330374-A-G				Y	Y		+
21507560-G-T	19345674-G-T				Y	Y		+
21534070-C-T	19372184-C-T				Y	Y		+
21567190-A-G	19405304-A-G				Y	Y		+
21614658-C-G	19452772-C-G				Y	Y		+
21682905-T-C	19521019-T-C				Y	Y		+
21779465-G-T	19617579-G-T				Y	Y		+
21910266-T-C	19748380-T-C				Y			+
22170754-A-G	20008868-A-G				Y			+
22228405-C-A	20066519-C-A			DYZ19				+
22281183-G-C	20119297-G-C			DYZ19				+
22293802-G-T	20131916-G-T			DYZ19				+
22325555-A-T	20163669-A-T			DYZ19				+
22335402-G-T	20173516-G-T			DYZ19				+
22366871-G-T	20204985-G-T			DYZ19				+
22366875-T-G	20204989-T-G			DYZ19				+
22443882-T-G	20281996-T-G			DYZ19				+
22457833-G-C	20295947-G-C			DYZ19				+
22460698-C-T	20298812-C-T			DYZ19				+
22507231-G-T	20345345-G-T			DYZ19				+
22519421-A-C	20357535-A-C				Y			+
22540571-T-TAC	20378685-T-TAC							+
22794699-T-A	20632813-T-A				Y	Y		+
22804651-A-G	20642765-A-G				Y	Y		+
22842362-C-G	20680476-C-G				Y	Y		+
23151469-T-A	20989583-T-A				Y	Y		+
23229972-C-T	21068086-C-T				Y			+
23298178-T-C	21136292-T-C				Y	Y		+
23325314-G-A	21163428-G-A				Y	Y		+
23962350-A-T	21816203-A-T					Y		+
24452241-G-T	22306094-G-T					Y		+
24469306-C-T	22323159-C-T					Y		+
24880487-A-G	22734340-A-G			g1				+
24931595-G-T	22785448-G-T			g1				+
25018740-C-A	22872593-C-A			g1				+
26730631-T-A	24584484-T-A			P1_g2				+
28224392-C-A	26078245-C-A			P1_b4				+
28717612-T-C	26571465-T-C							+
	56697260-T-A							+
	56761628-G-C							+
	56769745-G-A							+
13489367-T-C,G	11333691-T-C,G							*
9506693-TTG-T	9669084-TTG-T							*
58883701-G-T	56707170-C-A							*
58978958-CTCCAA-C	56832811-CTCCAA-C							*
13466420-A-G	11310744-A-G							*
13722278-G-T	11566602-G-T							*
15074825-GTTA-G	12962915-GTTA-G						6×TTA	*
22486725-T-G	20324839-T-G			DYZ19				*
59012859-C-G	56866712-C-G							*
22962414-GTTTT-G	20800528-GTTTT-G						20×T	*
13611988-G-GTTTTTTT	11456312-G-GTTTTTTT						19×T	*
13475834-G-A	11320158-G-A							*
13466472-T-C	11310796-T-C							*
9305961-G-A	9468352-G-A				Y			*
9215644-C-G	9378035-C-G				Y			*
13461252-G-T	11305576-G-T							*
22345374-T-G	20183488-T-G			DYZ19				*
13976836-G-C	11856130-G-C				Y			*
22487220-A-T	20325334-A-T		BY224926	DYZ19				*
22486871-G-T	20324985-G-T			DYZ19				*
26834741-GAAGGAAGA-G	24688594-GAAGGAAGA-G			P1_g2				*
3411996-T-TTGTG	3543955-T-TTGTG						23×TG	*
58875080-C-T	56715791-G-A							*
19138084-C-CTATA	17026204-C-CTATA						10×TA	*
7364367-GTTTTTT-G	7496326-GTTTTTT-G						27×T	*
13463864-C-T	11308188-C-T		FGC52588					*
13480809-G-A	11325133-G-A							*
13480817-T-C	11325141-T-C							*
	10826187-A-T							*
	56707182-A-T							*
8342842-T-TA	8474801-T-TA						10×A	*
13461024-C-A	11305348-C-A							*
14621674-C-CAG	12509872-C-CAG						9×AG	*
21086136-TAAA-T	18924250-TAAA-T						24×A	*
	11021352-T-G							*
	10938311-C-T							*
	11031316-C-G							*
17926534-CAAAA-C	15814654-CAAAA-C						25×A	*
18616784-G-GTT	16504904-G-GTT						15×T	*
27263122-T-TTG,TTGTG	25116975-T-TTG,TTGTG			P1_g3			21×TG	*
	10985023-GCATTC-G							*
19272142-C-CAA	17160262-C-CAA						18×A	*
13461005-T-A	11305329-T-A							*
15882429-G-GT,GTT	13770549-G-GT,GTT						13×T	*
	10836586-A-T							*
17657331-T-TA	15545451-T-TA						10×A	*
22505700-C-G	20343814-C-G			DYZ19				*
13465081-T-A	11309405-T-A							*
5007689-CAAAA-C	5139648-CAAAA-C						22×A	*
	56832829-C-A							*
6293347-CTTT-C	6425306-CTTT-C			IR3_Dst			15×T	*
3081812-CAA-C	3213771-CAA-C						33×A	*
13458705-C-G	11303029-C-G							*
6874882-C-CA	7006841-C-CA						9×A	*
	56834509-A-G,T							*
13485691-G-T	11330015-G-T							*
13936205-G-GAAGA,GAAGAAAGA	11815499-G-GAAGA,GAAGAAAGA						14×AAGA	*
	10836601-T-G							*
19059747-C-CTT	16947867-C-CTT						25×T	*
2747786-A-T	2879745-A-T				Y	Y	8×AT	*
10020964-ACT-A	10183355-ACT-A							*
3706014-TA-T	3837973-TA-T						10×A	*
13462305-C-A	11306629-C-A							*
3428733-C-T	3560692-C-T							*
16401981-GTATA-G	14290101-GTATA-G						9×TA	*
13981820-AT-A	11861114-AT-A						8×T	*
13458711-C-T	11303035-C-T							*
20842517-G-GGAAA,GGAAAGAAA	18680631-G-GGAAA,GGAAAGAAA			P4_Dst			14×GAAA	*
4583025-G-GTT	4714984-G-GTT						27×T	*
13465083-C-T	11309407-C-T							*
	10836589-C-A							*
13461020-T-C	11305344-T-C							*
4292835-T-TAA	4424794-T-TAA						13×A	*
5492439-CTTT-C	5624398-CTTT-C						18×T	*
	10826198-T-C							*
8379577-CTG-C,CTGTG	8511536-CTG-C,CTGTG						18×TG	*
8776547-CTTTT-C,CTTT	8908506-CTTTT-C,CTTT						24×T	*
	11031312-A-C							*
21175749-CAAAAA-C	19013863-CAAAAA-C						27×A	*
23833401-C-CAA	21671515-C-CAA						11×A	*
22345337-T-C	20183451-T-C			DYZ19				*
	9120876-ATTT-A							*
14722668-CA-C	12610736-CA-C						9×A	*
	56749888-A-G							*
22278775-C-T	20116889-C-T			DYZ19				*
13287971-C-CTCTCTCTCTA	11132295-C-CTCTCTCTCTA							*
13465092-G-A	11309416-G-A							*
5178062-CAAAAAAAA-C	5310021-CAAAAAAAA-C						20×A	*
16494370-TGTAG-T	14382490-TGTAG-T							*
3186741-CAA-C	3318700-CAA-C						15×A	*
4537586-CTTT-C,CT	4669545-CTTT-C,CT						21×T	*
13469971-G-C	11314295-G-C							*
13470007-G-T	11314331-G-T							*
6521551-GTT-G,GT	6653510-GTT-G,GT						17×T	*
13469178-C-A	11313502-C-A							*
3609403-A-G	3741362-A-G							*
13475864-C-T	11320188-C-T		BY85950					*
4200055-C-CAA	4332014-C-CAA						23×A	*
13740145-G-A	11584469-G-A							*
5138547-CAAAA-C	5270506-CAAAA-C						17×A	*
16046631-T-TACAC	13934751-T-TACAC						17×AC	*
5549533-A-C	5681492-A-C							*
13719095-G-T	11563419-G-T							*
13719096-G-T	11563420-G-T							*
13462037-T-G	11306361-T-G							*
13462090-G-T	11306414-G-T							*
	56832839-CATG-C							*
	56832844-CAG-C							*
13720007-G-T	11564331-G-T							*
13692979-GGAATA-G	11537303-GGAATA-G							*
9980752-A-AAAGGAAGG	10143143-A-AAAGGAAGG							*
6413855-CTTT-C	6545814-CTTT-C						14×T	*
17048401-TTTG-T	14936521-TTTG-T						5×TTG	*
13469152-G-C	11313476-G-C							*
13390081-T-C	11234405-T-C							*
13432824-G-A	11277148-G-A							*
22325343-TGTGTCCAGAGTTTCTTCCTTGTGGCAGGTTCATGGTCTTGCTCACTTC-T	20163457-TGTGTCCAGAGTTTCTTCCTTGTGGCAGGTTCATGGTCTTGCTCACTTC-T			DYZ19				*
22325393-AGAATGAAGCTGCAGAATTTAGTGGTGAGCGTTACAGCACTTAAGTTTTTAT-A	20163507-AGAATGAAGCTGCAGAATTTAGTGGTGAGCGTTACAGCACTTAAGTTTTTAT-A			DYZ19				*
5042180-GATATAT-G,GAT	5174139-GATATAT-G,GAT						17×AT	*
13470026-A-G	11314350-A-G							*
13470048-G-C	11314372-G-C							*
	11649618-A-AAATGGAATGG,AAATGGAATGGAATGG							*
22505675-C-G	20343789-C-G			DYZ19				*
	56834380-T-TTCCATTCCATTCCAC,TTCCGTTCAATTCCTC							*
28803645-G-A	26657498-G-A		BY227374					*
7275186-C-A	7407145-C-A				Y	Y		*
13447563-CCATTCCATTGCATTCCATTGTATTCCATTCCATTGCAATGCATTCAATTCCATTCCATCCCATTCCGTTCCACTCCTGCGAGCTCCACTCCACTCCACTCCACTG-C	11291887-CCATTCCATTGCATTCCATTGTATTCCATTCCATTGCAATGCATTCAATTCCATTCCATCCCATTCCGTTCCACTCCTGCGAGCTCCACTCCACTCCACTCCACTG-C							*
14532372-G-C	12420573-G-C				Y			*
5035558-TTGTG-T,TTGTGTGTGTG	5167517-TTGTG-T,TTGTGTGTGTG						22×TG	*
13489230-A-C	11333554-A-C							*
13739941-T-A	11584265-T-A							*
13739951-T-A	11584275-T-A							*
13465001-C-G	11309325-C-G							*
13474278-T-A	11318602-T-A							*
13474289-C-A	11318613-C-A							*
13690681-A-AT	11535005-A-AT							*
10017070-T-TCACACA,TCACACACA	10179461-T-TCACACA,TCACACACA						16×CA	*
13720122-G-A	11564446-G-A							*
13470305-C-A	11314629-C-A		BY85835					*
13470329-C-T	11314653-C-T							*
13478131-GCA-G	11322455-GCA-G							*
17324227-G-C	15212347-G-C				Y	Y		*
13463833-T-TA	11308157-T-TA							*
13463835-C-A	11308159-C-A							*
13463848-G-A	11308172-G-A							*
13463849-A-C	11308173-A-C							*
13463850-G-A	11308174-G-A							*
	56832797-TC-T							*
23732689-C-CT	21570803-C-CT						9×T	*
8888375-C-CGTT	9020334-C-CGTT						25×T	*
8682205-C-A	8814164-C-A				Y	Y		*
2747784-TAA-T	2879743-TAA-T							*
3428735-C-T	3560694-C-T							*
3428737-C-T	3560696-C-T							*
3428739-C-T	3560698-C-T							*
3477851-G-GGT,GGTGT	3609810-G-GGT,GGTGT						17×GT	*
3640537-TTCCTTCC-T,TTTCC	3772496-TTCCTTCC-T,TTTCC							*
3790876-GTGTATATATATATATATATATATATATA-G,GTA	3922835-GTGTATATATATATATATATATATATATA-G,GTA							*
4067396-G-T	4199355-G-T							*
4304829-G-A	4436788-G-A							*
4470979-G-A	4602938-G-A							*
4689036-C-G	4820995-C-G							*
5550296-T-G	5682255-T-G							*
5786608-CAAA-C	5918567-CAAA-C						20×A	*
5936159-GATATATATATAT-G,GAT	6068118-GATATATATATAT-G,GAT						19×AT	*
5937236-CTCTCTCTATATATATATA-C	6069195-CTCTCTCTATATATATATA-C							*
6144430-C-CAAA	6276389-C-CAAA			IR3_Dst			13×A	*
6341720-G-A	6473679-G-A							*
6451957-GTTT-G	6583916-GTTT-G						17×T	*
6775420-C-CAAAAA,CAAAAAAA	6907379-C-CAAAAA,CAAAAAAA						12×A	*
6918869-T-TAC,TACAC	7050828-T-TAC,TACAC						18×AC	*
7347199-T-C	7479158-T-C				Y			*
9173674-C-T	9336065-C-T				Y			*
9178008-G-A	9340399-G-A				Y			*
9192861-G-A	9355252-G-A				Y			*
9196319-C-T	9358710-C-T				Y			*
9205406-G-A	9367797-G-A				Y			*
9231698-AACACACACACACAC-A,AACACACACACACACACACAC	9394089-AACACACACACACAC-A,AACACACACACACACACACAC						22×AC	*
9329439-A-T	9491830-A-T				Y			*
9341608-C-T	9503999-C-T				Y			*
9345322-T-C	9507713-T-C				Y			*
9533969-C-T	9696360-C-T			IR3_Prx				*
9771567-AAAT-A	9933958-AAAT-A						6×AAT	*
9903960-G-GAC,GACAC	10066351-G-GAC,GACAC						15×AC	*
	10773524-C-A							*
	10809109-GTTCCATTCCA-G,GTTCCA							*
	10825274-G-GCATTCCATTC,GCATTCCATTCCATTC							*
	10849636-AACACTACACTACACTACACT-A,AACACT							*
	10858339-CTTCCA-C							*
	10938298-AT-A							*
	10938303-ATTCC-A							*
	10982383-C-T							*
	10982390-C-T							*
	10982395-C-T							*
13272571-C-A	11116895-C-A							*
13454794-T-G	11299118-T-G							*
13465086-A-G	11309410-A-G							*
13472009-A-ACCCCGGGGAGAGAATCCACAGAGCGGATAACTGCCGTTCTTTCCTGGGCATCCTGGGGATTCCAGATCCGGCCCAGGTACCAGCATGTGGGCTGCCTACCGTGCACGCGCCGGTTTGCGGGAAGCTGCCTGGGCTGT	11316333-A-ACCCCGGGGAGAGAATCCACAGAGCGGATAACTGCCGTTCTTTCCTGGGCATCCTGGGGATTCCAGATCCGGCCCAGGTACCAGCATGTGGGCTGCCTACCGTGCACGCGCCGGTTTGCGGGAAGCTGCCTGGGCTGT							*
13475880-G-T	11320204-G-T							*
13489651-G-A	11333975-G-A							*
13492965-A-C	11337289-A-C							*
13500110-CAAAAAA-C,CAAAAAAA	11344434-CAAAAAA-C,CAAAAAAA						16×A	*
13506804-T-C	11351128-T-C							*
13607821-ATT-A,ATTT	11452145-ATT-A,ATTT						10×T	*
13611827-AACC-A	11456151-AACC-A							*
13688844-T-A	11533168-T-A							*
13688982-A-T	11533306-A-T							*
13688992-A-G	11533316-A-G							*
13691347-T-A	11535671-T-A							*
13694787-G-A	11539111-G-A							*
13706117-TGGAATGGAA-T	11550441-TGGAATGGAA-T							*
13711223-T-A	11555547-T-A							*
13711787-T-C	11556111-T-C							*
13720129-A-C	11564453-A-C							*
13722373-G-T	11566697-G-T							*
13730087-A-G	11574411-A-G							*
	12297437-G-GTATATATATATGTATATA,GTATATATATATGTATATATATA							*
	12489022-TACACAC-T,TACAC						16×AC	*
14993842-A-AT,ATT	12881927-A-AT,ATT						13×T	*
15248055-T-C	13136141-T-C				Y			*
	13196928-TAC-T,TACAC						21×AC	*
15865946-C-CTTTGTTTTTTTTT	13754066-C-CTTTGTTTTTTTTT						37×T	*
16297330-GTTTT-G,GTT	14185450-GTTTT-G,GTT						26×T	*
16345135-C-CTCTTCT,CTCTTCTTCT	14233255-C-CTCTTCT,CTCTTCTTCT						18×TCT	*
16494317-A-AATAT,AATATAT	14382437-A-AATAT,AATATAT						11×AT	*
16494367-A-T	14382487-A-T				Y	Y		*
17054866-A-AATATATATAT,AATATATATATAT	14942986-A-AATATATATAT,AATATATATATAT						13×AT	*
17198461-AAGAGAGAGAGAGAG-A,AAGAGAG	15086581-AAGAGAGAGAGAGAG-A,AAGAGAG						18×AG	*
17317720-T-TCACA,TCACACA	15205840-T-TCACA,TCACACA						23×CA	*
17339229-G-GA,GAA	15227349-G-GA,GAA						13×A	*
18354309-GAGAA-G,GAGAAAGAA	16242429-GAGAA-G,GAGAAAGAA			P6_Prx			10×AGAA	*
18365541-ATGTGTGTGTGTGTGTGTGTG-A,ATGTGTGTGTGTGTGTGTG	16253661-ATGTGTGTGTGTGTGTGTGTG-A,ATGTGTGTGTGTGTGTGTG			P6_Prx			20×TG	*
18398192-CATATATATATAT-C,CATATATAT	16286312-CATATATATATAT-C,CATATATAT			P6_Gap			15×AT	*
19547319-T-C	17435439-T-C				Y	Y		*
19619236-G-C	17507356-G-C			P5_Prx	Y			*
20560534-C-G	18398648-C-G			P5_Dst				*
20614708-A-G	18452822-A-G			P4_Prx				*
20712357-A-G	18550471-A-G			P4_Prx				*
20931817-T-C	18769931-T-C			P4_Dst				*
21156831-G-GT,GTTT	18994945-G-GT,GTTT						19×T	*
21224779-A-AT,ATTTTT	19062893-A-AT,ATTTTT						19×T	*
22092601-CTTTATTTA-C,CTTTA	19930715-CTTTATTTA-C,CTTTA						12×TTTA	*
22227414-G-T	20065528-G-T			DYZ19				*
22227415-G-T	20065529-G-T			DYZ19				*
22227430-T-A	20065544-T-A			DYZ19				*
22227431-A-G	20065545-A-G			DYZ19				*
22227438-G-A	20065552-G-A			DYZ19				*
22227465-C-A	20065579-C-A			DYZ19				*
22295405-T-G	20133519-T-G			DYZ19				*
22303326-A-T	20141440-A-T			DYZ19				*
22303503-C-T	20141617-C-T			DYZ19				*
22345448-T-C	20183562-T-C			DYZ19				*
22423563-G-T	20261677-G-T			DYZ19				*
22424895-G-T	20263009-G-T			DYZ19				*
22427868-A-G	20265982-A-G			DYZ19				*
22439458-A-G	20277572-A-G			DYZ19				*
22441953-A-G	20280067-A-G			DYZ19				*
22457810-G-T	20295924-G-T			DYZ19				*
22485783-A-G	20323897-A-G			DYZ19				*
22505678-G-C	20343792-G-C			DYZ19				*
22505691-C-T	20343805-C-T			DYZ19				*
22505694-T-C	20343808-T-C			DYZ19				*
22511480-T-A	20349594-T-A			DYZ19				*
23196182-T-A	21034296-T-A				Y			*
24355660-G-GAT	22209513-G-GAT							*
24961318-A-G	22815171-A-G			g1				*
25026115-A-G	22879968-A-G			g1				*
25086501-C-CA	22940354-C-CA			g1			10×A	*
25201091-A-AAAGGAAGAAAGG	23054944-A-AAAGGAAGAAAGG			g1			15×AAGG	*
25312604-A-C	23166457-A-C			P2_r1				*
25376544-T-G	23230397-T-G			P2_r2				*
25592900-C-CTCTATATA	23446753-C-CTCTATATA			P1_gr1			12×TA	*
25688784-A-AT	23542637-A-AT			P1_b3				*
25688785-G-A	23542638-G-A			P1_b3				*
25995031-CTA-C,CTCTATA	23848884-CTA-C,CTCTATA			P1_Y1			12×TA	*
27791898-CTCTTCCTCTTCTTCTTCTTCTTCT-C	25645751-CTCTTCCTCTTCTTCTTCTTCTTCT-C			P1_Y2				*
27883325-CAA-C	25737178-CAA-C			P1_Y2			14×A	*
27967361-G-T	25821214-G-T			P1_Y2				*
27998485-CAAAAAAAAAAAAA-C,CA	25852338-CAAAAAAAAAAAAA-C,CA			P1_Y2			30×A	*
28245688-G-GT	26099541-G-GT			P1_b4				*
28600982-CAT-C	26454835-CAT-C							*
28600985-T-C	26454838-T-C					Y		*
28793485-G-GGAA	26647338-G-GGAA							*
28806483-G-A	26660336-G-A							*
28811208-G-GC	26665061-G-GC							*
28811209-G-GTGGA	26665062-G-GTGGA							*
28811874-T-C	26665727-T-C							*
	56706763-G-T							*
	56763649-A-ATCAAACGGAATGGCT							*
	56832785-AC-A							*
	56832787-TCTAC-T							*
	56832800-TCTCC-T							*
	56834409-A-ATTCCACTCCTATCCACTCAATTCCT							*
	56863386-T-C							*
	56881612-G-T							*

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.