Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF63/S522 > BY592 > CTS5454 > Z16245 > Z16246 > BY3070 > FT72783 > BY56496

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	B161416
13675019-C-CATGGA	11519343-C-CATGGA	L513/S215/DF1					7×ATGGA	+
17859117-T-C	15747237-T-C				Y			+
14112891-T-C	11992185-T-C				Y			+
	10756773-C-T							+
14404784-G-A	12284081-G-A		FT61428		Y	Y		+
14404998-A-G	12284295-A-G		FT61429		Y	Y		+
14464085-G-C	12343358-G-C		FT61437		Y	Y		+
7210998-T-A	7342957-T-A		FT36430		Y			+
7211003-T-A	7342962-T-A		FT36431		Y			+
17192997-A-T	15081117-A-T		FT61743		Y	Y		+
14797183-G-C	12685254-G-C		FT61464		Y			+
7336961-G-A	7468920-G-A		FT61111		Y	Y		+
14964633-A-G	12852708-A-G				Y			+
15395051-C-G	13283171-C-G		FT61529		Y			+
15645301-C-T	13533421-C-T				Y			+
13943816-C-G	11823110-C-G		FT61352		Y			+
15732803-C-T	13620923-C-T		FT61565		Y	Y		+
15946917-T-C	13835037-T-C		FT61599		Y	Y		+
16657036-A-G	14545156-A-G				Y			+
22345756-TG-T	20183870-TG-T			DYZ19				+
22219947-G-T	20058061-G-T			DYZ19				+
17727674-T-C	15615794-T-C				Y			+
17747369-T-C	15635489-T-C		FT61809		Y	Y		+
18575342-T-G	16463462-T-G		FT61885		Y	Y		+
18813559-C-A	16701679-C-A		FT61915		Y	Y		+
19025642-A-T	16913762-A-T				Y			+
19061300-C-T	16949420-C-T		FT61952		Y	Y		+
20349941-T-C	18188055-T-C			P5_Dst				+
14053173-T-G	11932467-T-G		FT61375		Y			+
4548895-T-A	4680854-T-A						8×A	+
22134284-T-A	19972398-T-A		FT62150		Y	Y		+
10047133-T-C	10209524-T-C							+
14385503-C-A	12264799-C-A		FT61424		Y			+
7122164-G-A	7254123-G-A				Y			+
8282476-G-A	8414435-G-A		FT61199		Y	Y		+
18442938-CTCTT-C	16331058-CTCTT-C			P6_Dst				+
7122139-T-C	7254098-T-C				Y			+
9111838-C-T	9274229-C-T		FT61278			Y		+
21349475-CT-C	19187589-CT-C						10×T	+
9537672-C-T	9700063-C-T			IR3_Prx				+
5758554-C-T	5890513-C-T		FT60916					+
5490310-G-A	5622269-G-A							+
10047121-A-G	10209512-A-G							+
10047130-C-A	10209521-C-A							+
4412318-G-A	4544277-G-A							+
22237319-A-T	20075433-A-T			DYZ19				+
23066613-G-A	20904727-G-A		FT62203		Y			+
22236202-G-A	20074316-G-A			DYZ19				+
14695992-CAAAAAAAAA-C	12584058-CAAAAAAAAA-C						30×A	+
	10789311-G-A		FT431267					+
	10923798-G-C		FT87740					+
	10954328-CTCCATTCCAT-C							+
4134272-G-A	4266231-G-A		FT60684					+
3914891-A-G	4046850-A-G		FT60660					+
3394387-C-T	3526346-C-T		FTB65242					+
3201021-G-T	3332980-G-T		FT60547					+
16427460-G-A	14315580-G-A				Y			+
13473140-A-T	11317464-A-T							+
20772032-TCTCAG-T	18610146-TCTCAG-T			P4_Prx				+
7289671-G-T	7421630-G-T		FT61106		Y	Y		+
23586289-T-C	21424403-T-C		FT62253		Y	Y		+
23978951-G-A	21832804-G-A		FT62277			Y		+
23418000-T-C	21256114-T-C		FT62238		Y	Y		+
25200792-AGAAG-A	23054645-AGAAG-A			g1			9×GAAG	+
27435502-G-A	25289355-G-A			P1_g3				+
22635500-A-G	20473614-A-G				Y			+
22578762-T-TA	20416876-T-TA							+
22839000-A-T	20677114-A-T				Y			+
22543300-A-G	20381414-A-G				Y			+
24889830-G-A	22743683-G-A			g1				+
13142948-GCATTCCATTC-G	10632434-GCATTCCATTC-G						11×CATTC	+
27692068-G-GAAA	25545921-G-GAAA			P1_Y2			15×A	+
22530329-G-T	20368443-G-T				Y			+
13336491-G-T	11180815-G-T							*
13748486-T-C	11592810-T-C							*
	56831485-C-CTAAACTCCACTCCACTCCATTCCATTCCA							*
	56724850-G-GT							*
3194203-AT-A	3326162-AT-A							*
24080169-T-TA	21934022-T-TA			P3_b1			11×A	*
13336488-T-C	11180812-T-C							*
2957339-G-T	3089298-G-T							*
	10760350-T-TACTCCATTCCACTCCACTCCACTTCATTCCATTACACTGCATTCCGAATGATTCCACTACTTTCCATTCCATTTCACTCCATTCCACTCCATTCCATTCCACTGC,TACTCCATTCCACTCCACTCCACTTCATTCCATTACACTGCATTCCGAATGATTCCACTACTTTCCATTCCATTTCACTCCATTCCACTCCATTCCATTCCACTGC							*
2750871-G-GA	2882830-G-GA							*
2758842-CAAA-C,CAA	2890801-CAAA-C,CAA						19×A	*
2897562-C-T	3029521-C-T				Y			*
22288261-G-A	20126375-G-A			DYZ19				*
2864336-T-C	2996295-T-C				Y	Y		*
8888375-C-CT,CT	9020334-C-CT,CT						25×T	*
2773687-C-A	2905646-C-A				Y			*
2670869-C-A	2802828-C-A				Y			*
2946642-T-C	3078601-T-C							*
	11578507-AAT-							*
22255471-G-GGGTTACAGCACTTAAAGGTGTTATGTCCAGAGTTTTTTCCTTCAGATGTGTCAAGAGTTTCTTCCTTCTGGAAGGTTCATGGTCTTGCTCACTTCAAGAATGAAGCTGCAGACCTTAGTGGTGAC	20093585-G-GGGTTACAGCACTTAAAGGTGTTATGTCCAGAGTTTTTTCCTTCAGATGTGTCAAGAGTTTCTTCCTTCTGGAAGGTTCATGGTCTTGCTCACTTCAAGAATGAAGCTGCAGACCTTAGTGGTGAC			DYZ19				*
7270276-C-A	7402235-C-A				Y	Y	25×T	*
	10757170-C-CT,CT							*
	10846974-A-ATTCTT							*
7104455-CCT-C	7236414-CCT-C							*
13461265-C-A	11305589-C-A							*
21050838-T-TTATC,TTATCTATC	18888952-T-TTATC,TTATCTATC						10×TATC	*
	10908294-C-CTA							*
13470568-C-T	11314892-C-T							*
22366441-C-A	20204555-C-A			DYZ19				*
22366442-A-T	20204556-A-T			DYZ19				*
22477403-A-T	20315517-A-T			DYZ19				*
6401916-A-G	6533875-A-G							*
13463728-G-T	11308052-G-T							*
13478479-CAG-C	11322803-CAG-C							*
13451163-T-C,TCCTCTGCACTCC	11295487-T-C,TCCTCTGCACTCC							*
	11532706-C-							*
13469101-T-C	11313425-T-C							*
13474289-C-A	11318613-C-A							*
9962555-A-T	10124946-A-T				Y			*
	10776056-A-ATGCCT							*
13478515-G-A	11322839-G-A							*
13479170-A-G	11323494-A-G							*
28819186-G-C	26673039-G-C							*
13484199-G-A	11328523-G-A							*
	10942751-CATTCCAATCCAA-C							*
	10942765-C-G							*
3537095-T-C	3669054-T-C							*
3266217-T-A	3398176-T-A							*
6413870-G-A	6545829-G-A							*
5404758-G-A	5536717-G-A							*
5452626-CTT-C	5584585-CTT-C						11×T	*
5600893-T-A	5732852-T-A							*
5744779-A-G	5876738-A-G							*
13469544-C-T	11313868-C-T							*
5821864-G-A	5953823-G-A							*
5973792-C-G	6105751-C-G							*
6158117-T-C	6290076-T-C			IR3_Dst				*
13450745-C-CCG	11295069-C-CCG							*
	6534268-TTCTTCCGTGTCGTAAAATACCGACGTATTTGTTATAA-							*
6444836-CTA-C,CTATATA	6576795-CTA-C,CTATATA						12×TA	*
5305754-GTT-G	5437713-GTT-G							*
6460596-TA-T	6592555-TA-T							*
13275153-CT-C	11119477-CT-C						11×T	*
22430299-T-TA	20268413-T-TA			DYZ19				*
6642736-T-C	6774695-T-C				Y	Y		*
6856743-C-CA	6988702-C-CA						8×A	*
13480952-A-T	11325276-A-T							*
13480951-C-G	11325275-C-G							*
10062592-C-CAA	10224983-C-CAA							*
22508104-G-A	20346218-G-A			DYZ19				*
7197413-C-T	7329372-C-T				Y	Y		*
9985057-T-C	10147448-T-C				Y			*
5349101-T-C	5481060-T-C							*
13473858-A-C	11318182-A-C							*
3428588-T-C	3560547-T-C							*
4937662-G-GT,GTT	5069621-G-GT,GTT						12×T	*
13506676-T-TTAA	11351000-T-TTAA							*
3651714-GA-G	3783673-GA-G						10×A	*
3662204-T-C	3794163-T-C							*
28791656-G-T	26645509-G-T							*
3965538-CTT-C	4097497-CTT-C						9×T	*
4023044-TA-T	4155003-TA-T						8×A	*
4686434-C-T	4818393-C-T							*
28780697-GAC-G	26634550-GAC-G							*
4727059-A-G	4859018-A-G							*
4934027-G-GTT	5065986-G-GTT						10×T	*
4956079-C-CTTT	5088038-C-CTTT						13×T	*
13473862-C-T	11318186-C-T							*
28780696-T-TAAAG	26634549-T-TAAAG							*
5033641-GA-G	5165600-GA-G						8×A	*
5049475-T-C	5181434-T-C							*
5059178-T-C	5191137-T-C							*
22487082-TC-T	20325196-TC-T			DYZ19				*
5082944-AT-A	5214903-AT-A						12×T	*
5194776-A-G	5326735-A-G							*
5209697-C-T	5341656-C-T							*
5273214-CTTTT-C,CTTTTT	5405173-CTTTT-C,CTTTTT						23×T	*
13489758-G-T	11334082-G-T							*
13489670-G-A	11333994-G-A							*
	11322804-AGGTT-							*
13470554-C-T	11314878-C-T							*
13729048-G-A	11573372-G-A							*
	10945225-CCACTCCAA-C							*
16244792-GGTGT-G,G	14132912-GGTGT-G,G						16×GT	*
13474392-A-C	11318716-A-C							*
13481010-C-G	11325334-C-G							*
13481018-T-G	11325342-T-G							*
13245161-C-T	11089485-C-T							*
13483708-C-T	11328032-C-T							*
13484122-C-G	11328446-C-G							*
13706976-T-A	11551300-T-A							*
	10945215-CAACTCCA-C							*
	10945224-T-G							*
13351760-T-G	11196084-T-G							*
13478231-G-C	11322555-G-C							*
13464983-A-G	11309307-A-G							*
13476601-G-A	11320925-G-A							*
13476729-C-T	11321053-C-T							*
	11334089-TACCCGGCC-							*
28805548-G-GAAT	26659401-G-GAAT							*
28805546-T-TGG	26659399-T-TGG							*
22509521-C-G	20347635-C-G			DYZ19				*
28798966-AG-A	26652819-AG-A							*
28798980-G-GGAAGGAATGGA	26652833-G-GGAAGGAATGGA							*
28798983-T-TGAAA	26652836-T-TGAAA							*
28805544-A-G	26659397-A-G							*
13488844-G-GCT	11333168-G-GCT							*
	56835867-G-GCCACTCCATTCCACTCCACTCCATTCCATTCCACTCTACTCCACTCCACTCCACGCCACTCCATTCCACTCCACA							*
	11294473-T-							*
13482103-C-T	11326427-C-T							*
	26659082-G-							*
	10094477-TTTAAAAA-							*
13336471-C-T	11180795-C-T							*
13356656-C-A	11200980-C-A							*
13356657-T-TGAA	11200981-T-TGAA							*
13476525-T-TTG	11320849-T-TTG							*
13484910-G-A	11329234-G-A							*
	11334024-C-							*
13737482-T-G	11581806-T-G							*
13740252-G-C	11584576-G-C							*
13478482-G-GTT	11322806-G-GTT							*
13707394-C-CGT	11551718-C-CGT							*
13478463-C-G	11322787-C-G							*
6401877-G-A	6533836-G-A							*
	10669540-ATT-A							*
	10669543-CCGT-C							*
	10669553-C-T							*
13401324-GCT-G	11245648-GCT-G							*
	10669563-C-G							*
	10987846-TTCCATTCCATTCCATTCCACTCCAC-T,T							*
13470068-C-T	11314392-C-T							*
13470076-C-G	11314400-C-G							*
13476551-G-A	11320875-G-A							*
13470093-A-G	11314417-A-G							*
28798990-G-GAGTGGAGAGA	26652843-G-GAGTGGAGAGA							*
13479189-C-G	11323513-C-G							*
13478904-ACC-A	11323228-ACC-A							*
13482328-A-T	11326652-A-T							*
13417495-A-G	11261819-A-G							*
	11026247-T-TAGACTCCAC							*
22459160-C-T	20297274-C-T			DYZ19				*
10034745-T-C	10197136-T-C				Y			*
13356663-G-GA	11200987-G-GA							*
13478065-C-G	11322389-C-G							*
13469880-G-T	11314204-G-T							*
	56826965-T-TCC							*
13552039-C-T	11396363-C-T							*
13469335-C-CTGCCG	11313659-C-CTGCCG							*
	56831484-C-CT							*
13478450-T-A	11322774-T-A							*
13480241-G-A	11324565-G-A							*
13356629-G-T	11200953-G-T						11×A	*
	11323443-T-							*
28805554-AGTGG-A	26659407-AGTGG-A							*
28805562-GA-G	26659415-GA-G							*
	56678191-A-G							*
13481051-C-A	11325375-C-A							*
13476724-T-G	11321048-T-G							*
	10661200-TGCACTGCCCTTCACTCCA-							*
13479197-T-A	11323521-T-A							*
13478901-GA-G	11323225-GA-G							*
13478484-T-C	11322808-T-C							*
22484044-G-T	20322158-G-T			DYZ19				*
28805525-T-A	26659378-T-A							*
28805518-C-G	26659371-C-G							*
	56877854-CAAAAA-C,CA						18×A	*
	11334026-C-							*
13461951-G-T	11306275-G-T							*
28805519-T-A	26659372-T-A		BY227413					*
22288258-A-G	20126372-A-G			DYZ19				*
	56834769-G-GTATT							*
13478134-T-TGC	11322458-T-TGC							*
9944188-G-T	10106579-G-T				Y			*
14286808-C-G	12166102-C-G				Y	Y		*
	11295320-C-							*
13475212-A-T	11319536-A-T							*
13478457-A-T	11322781-A-T							*
22484053-G-C	20322167-G-C			DYZ19				*
13482257-G-A	11326581-G-A							*
13482823-T-G	11327147-T-G							*
13417496-G-C	11261820-G-C							*
13481041-GT-G	11325365-GT-G							*
13707146-TA-T	11551470-TA-T							*
28805516-T-A	26659369-T-A							*
2795559-GTTT-G,GT	2927518-GTTT-G,GT						24×T	*
13734821-G-C	11579145-G-C							*
7307496-G-T,T	7439455-G-T,T							*
10062622-A-T	10225013-A-T							*
10062623-GA-G	10225014-GA-G							*
13406728-T-C	11251052-T-C							*
10034752-G-C	10197143-G-C				Y			*
7543990-T-C	7675949-T-C				Y	Y		*
	16616858-CAGAG-						10×AG	*
17798018-G-A	15686138-G-A				Y			*
17798019-T-A	15686139-T-A				Y			*
17798023-T-C	15686143-T-C				Y			*
17798025-G-T	15686145-G-T				Y			*
17859914-A-G	15748034-A-G				Y			*
17864308-TA-T	15752428-TA-T							*
18365300-G-A	16253420-G-A			P6_Prx				*
18391128-T-C	16279248-T-C			P6_Gap				*
18539140-G-T	16427260-G-T				Y			*
18643392-G-GACACACAC	16531512-G-GACACACAC						16×AC	*
18686222-C-A	16574342-C-A				Y	Y		*
18744298-C-T	16632418-C-T				Y	Y		*
17798013-G-A	15686133-G-A				Y			*
18864942-T-C	16753062-T-C				Y	Y		*
	16758202-G-							*
19030639-G-T	16918759-G-T				Y			*
19438076-A-AAG	17326196-A-AAG							*
19449442-A-G	17337562-A-G				Y	Y		*
20380017-A-G	18218131-A-G			P5_Dst				*
21042807-C-T	18880921-C-T				Y			*
21125019-G-T	18963133-G-T				Y			*
21196958-C-T	19035072-C-T				Y			*
21282188-G-A	19120302-G-A				Y	Y		*
21393430-T-C	19231544-T-C				Y			*
17798017-T-C	15686137-T-C				Y			*
17361058-CAA-C,CAAA	15249178-CAA-C,CAAA						25×A	*
21498287-A-C	19336401-A-C				Y			*
16441990-T-C	14330110-T-C				Y	Y		*
14594268-A-G	12482468-A-G				Y	Y		*
14850535-G-T	12738601-G-T				Y	Y		*
14959885-T-C	12847960-T-C				Y			*
15103404-C-T	12991492-C-T				Y			*
15116900-A-G	13004987-A-G				Y			*
15281990-C-T	13170089-C-T				Y			*
15597152-T-C	13485272-T-C				Y			*
15636459-C-A	13524579-C-A				Y			*
15636470-A-G	13524590-A-G				Y			*
15753184-T-C	13641304-T-C				Y	Y		*
16322668-A-G	14210788-A-G				Y			*
16503033-C-T	14391153-C-T				Y			*
17256851-GCT-G	15144971-GCT-G							*
16562782-TAAAAA-T	14450902-TAAAAA-T						18×A	*
16574863-A-T	14462983-A-T				Y			*
16598711-G-A	14486831-G-A				Y	Y		*
16709568-A-T	14597688-A-T				Y			*
16715034-GGT-G,G	14603154-GGT-G,G						10×GT	*
17093184-T-A	14981304-T-A				Y			*
17167971-C-T	15056091-C-T				Y	Y		*
17169683-A-G	15057803-A-G				Y	Y		*
17169687-A-G	15057807-A-G				Y	Y		*
17169692-A-C	15057812-A-C				Y	Y		*
17169711-G-A	15057831-G-A		BY112775		Y	Y		*
17169714-T-A	15057834-T-A				Y	Y		*
21498277-T-A	19336391-T-A				Y			*
21498288-G-T	19336402-G-T				Y			*
	12371708-T-G							*
27593086-C-A	25446939-C-A			P1_Y2				*
23120621-A-G	20958735-A-G				Y	Y		*
23196402-T-C	21034516-T-C				Y			*
23234116-T-C	21072230-T-C				Y			*
23294788-A-C	21132902-A-C				Y	Y		*
23361530-T-C	21199644-T-C				Y			*
23413908-T-C	21252022-T-C				Y	Y		*
23435685-T-C	21273799-T-C				Y	Y		*
23438855-TA-T	21276969-TA-T							*
23838382-A-G	21676496-A-G							*
24573423-CTTTTTTT-C	22427276-CTTTTTTT-C			P3_t2			21×T	*
25086202-TA-T	22940055-TA-T			g1			9×A	*
27714323-T-C	25568176-T-C			P1_Y2				*
22876977-A-C	20715091-A-C				Y			*
28492696-A-AAAG	26346549-A-AAAG							*
28492700-A-G	26346553-A-G							*
28747981-C-T	26601834-C-T							*
28763587-G-A	26617440-G-A							*
	56685723-C-A							*
	56715450-G-T							*
	56715484-C-G							*
	56715812-G-T							*
	56724787-T-C							*
	56749714-T-G							*
	56749883-A-G							*
	56851815-T-C							*
22936392-T-C	20774506-T-C				Y	Y		*
22876921-T-C	20715035-T-C				Y			*
21504258-T-TC	19342372-T-TC							*
22318978-T-C,C	20157092-T-C,C			DYZ19				*
21550085-C-G	19388199-C-G				Y	Y		*
21738430-T-A	19576544-T-A				Y	Y		*
21748637-G-A	19586751-G-A				Y	Y		*
21786203-T-C	19624317-T-C				Y	Y		*
21807078-G-T	19645192-G-T				Y	Y		*
21934999-A-T	19773113-A-T				Y	Y		*
21990568-T-G	19828682-T-G				Y	Y		*
22130331-A-G	19968445-A-G				Y	Y		*
22266662-G-T	20104776-G-T			DYZ19				*
22289026-C-A	20127140-C-A			DYZ19				*
22303274-T-C	20141388-T-C			DYZ19				*
22318999-T-G,G	20157113-T-G,G			DYZ19				*
22854812-T-A	20692926-T-A				Y			*
22319020-CAAGT-C,C	20157134-CAAGT-C,C			DYZ19				*
22319065-T-C,C	20157179-T-C,C			DYZ19				*
22427993-GT-G	20266107-GT-G			DYZ19				*
22465858-ATGTCCAGAGTTTTTTCATTCAGATG-A	20303972-ATGTCCAGAGTTTTTTCATTCAGATG-A			DYZ19				*
22485489-A-T	20323603-A-T			DYZ19				*
	20325198-TACAGAGTTTGTTCTTTCAGATGTGTCCAGACTTTCTTCCTTCTGGCAGGTTCATGGTCTTGCTCACTTCAAGAATGAAGCTGCAGACCTTACTATTCAGTGTTAAAGCACTTAAAGGTGTTATA-			DYZ19				*
22510660-A-C	20348774-A-C			DYZ19				*
22510674-G-C	20348788-G-C			DYZ19				*
22547740-T-C	20385854-T-C				Y			*
22690715-T-A	20528829-T-A				Y			*
22812629-CTTTT-C,CTTTTT	20650743-CTTTT-C,CTTTTT						28×T	*
22814049-A-G	20652163-A-G				Y	Y		*
14576136-G-GAA	12464336-G-GAA						12×A	*
	12371706-T-TAC							*
7568123-C-A,A	7700082-C-A,A						10×A	*
13323528-C-T	11167852-C-T							*
	10785259-GTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCA-G							*
	10846986-TCTAC-T							*
	10846992-C-CATTT							*
	10942780-C-G							*
	10949605-C-T							*
13222513-A-T	11066837-A-T							*
13223196-GC-G	11067520-GC-G							*
13223199-A-G	11067523-A-G							*
13236443-C-T	11080767-C-T							*
13267754-G-C	11112078-G-C							*
13279998-CAAAA-C,CAAA	11124322-CAAAA-C,CAAA						26×A	*
13346776-CAA-C	11191100-CAA-C						13×A	*
	10763135-C-CAA							*
13362360-CAAAAA-C	11206684-CAAAAA-C						19×A	*
13362514-CAA-C	11206838-CAA-C						11×A	*
13364146-CAAAA-C,CA	11208470-CAAAA-C,CA						26×A	*
13414797-AT-A,ATT	11259121-AT-A,ATT						20×T	*
13445285-T-G	11289609-T-G							*
13447555-G-GTTCCATTCCATTTCA	11291879-G-GTTCCATTCCATTTCA							*
13461312-CAG-C	11305636-CAG-C							*
13464972-AG-A	11309296-AG-A							*
13464975-C-A	11309299-C-A							*
13464994-A-G	11309318-A-G							*
13465004-G-T	11309328-G-T							*
13465013-T-A	11309337-T-A							*
	10763153-T-TTCCACTCCACTCCAC,TTCCATTCCACTCCACTCCAC							*
	10763106-CATTCCAT-C							*
13468150-T-G	11312474-T-G							*
9402525-A-T	9564916-A-T				Y	Y		*
7578484-G-T	7710443-G-T				Y			*
7643298-GAGAGAGAGAGAGAGAC-G	7775257-GAGAGAGAGAGAGAGAC-G							*
7784300-T-A	7916259-T-A				Y	Y		*
8274063-A-T	8406022-A-T				Y	Y		*
8544450-C-CA	8676409-C-CA						9×A	*
8648172-GATATATATAT-G	8780131-GATATATATAT-G						14×AT	*
	9125623-T-C							*
9092752-C-CAA	9255143-C-CAA						11×A	*
9174731-G-T	9337122-G-T				Y			*
9300240-AACACACACACACAC-A	9462631-AACACACACACACAC-A						20×AC	*
9329110-G-A	9491501-G-A				Y			*
9799159-G-T	9961550-G-T				Y	Y		*
	10763101-CAAT-C							*
9828776-C-T	9991167-C-T				Y	Y		*
9854341-ATCTT-A	10016732-ATCTT-A							*
9900460-G-A	10062851-G-A				Y			*
10002468-G-A	10164859-G-A				Y			*
10024656-G-GTC	10187047-G-GTC							*
10027013-AT-A	10189404-AT-A							*
10034727-G-GGGGGGGGCCC	10197118-G-GGGGGGGGCCC							*
10034749-A-C	10197140-A-C				Y			*
22477393-A-T	20315507-A-T		FT459972	DYZ19				*
10042674-G-A	10205065-G-A							*
10067999-A-G	10230390-A-G							*
	10624580-TC-T							*
13465043-C-T	11309367-C-T							*
13468460-G-A	11312784-G-A							*
	12371703-CAT-C							*
13712014-G-T	11556338-G-T							*
	11333856-G-							*
	11333857-G-							*
13489535-T-TG	11333859-T-TG							*
13515531-A-G	11359855-A-G							*
13516557-A-G	11360881-A-G							*
13585211-C-T	11429535-C-T		FT445857					*
13585214-A-T	11429538-A-T							*
13608438-G-A	11452762-G-A							*
13608457-A-C	11452781-A-C							*
13620742-C-G	11465066-C-G							*
13709134-T-G	11553458-T-G		FT449330					*
13712877-T-C	11557201-T-C							*
13489522-G-GTT	11333846-G-GTT							*
13721280-TG-T	11565604-TG-T							*
13730733-C-A	11575057-C-A							*
13730771-T-C	11575095-T-C							*
13734103-A-C	11578427-A-C							*
13734221-CA-C	11578545-CA-C							*
13734246-G-A	11578570-G-A							*
13829430-T-TAATGG,TAATGGAATGG	11708724-T-TAATGG,TAATGGAATGG						9×AATGG	*
13913313-A-G	11792607-A-G				Y			*
13919222-A-G	11798516-A-G				Y			*
14128085-T-C	12007379-T-C				Y	Y		*
14286815-A-T	12166109-A-T				Y	Y		*
14331131-CT-C,CTTTT	12210425-CT-C,CTTTT						25×T	*
13489526-ACCCGCGGG-A	11333850-ACCCGCGGG-A							*
13488948-G-T	11333272-G-T							*
13469853-A-C	11314177-A-C							*
13476297-G-GGTTTAGAGATATGTCATAATGCCCCCATAGTCC	11320621-G-GGTTTAGAGATATGTCATAATGCCCCCATAGTCC							*
13470305-C-A	11314629-C-A		BY85835					*
13470329-C-T	11314653-C-T							*
13470384-CGT-C	11314708-CGT-C							*
13470390-G-GTCT	11314714-G-GTCT							*
13470392-G-GC	11314716-G-GC							*
13470394-TGG-T	11314718-TGG-T							*
13472009-AG-A	11316333-AG-A							*
13472011-G-C	11316335-G-C							*
13472017-T-G	11316341-T-G							*
	11318855-GTT-							*
	11318860-GTCACAATGCCGCCTTTTGGCAGAGCCTAGACAAGGGTTACATCACCTGGGTGATCAGTGCAGAGATA-							*
13476516-A-G	11320840-A-G							*
13488918-C-G	11333242-C-G							*
13476606-C-CAT	11320930-C-CAT							*
13476608-C-CGT	11320932-C-CGT							*
	11323226-A-							*
13478909-C-CT	11323233-C-CT							*
13479184-T-A	11323508-T-A							*
13479252-T-A	11323576-T-A							*
13480250-A-T	11324574-A-T							*
13480351-T-TGTCACAATACCTTCTGAAGGTGGAGCCTAGACAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATAC	11324675-T-TGTCACAATACCTTCTGAAGGTGGAGCCTAGACAAGAGTTACATCACCTGGGTGATCAGTGCAGAGATAC							*
13480609-A-T	11324933-A-T							*
13483728-A-T	11328052-A-T							*
13483735-A-T	11328059-A-T							*
13483831-G-C	11328155-G-C							*
	56831928-C-CGTTCG							*
13483902-T-A	11328226-T-A							*
22448756-G-A	20286870-G-A			DYZ19				*
	11029634-A-C							*
26415749-G-GTT	24269602-G-GTT			P1_Y1			14×T	*
	10917900-G-A							*
	10917985-T-C							*
	10908390-C-T							*
	10908391-A-G							*
14960331-A-G	12848406-A-G				Y			*
	56756811-A-T							*
22920605-CTT-C,CT	20758719-CTT-C,CT						25×T	*
13721329-A-T	11565653-A-T							*
13474447-G-C	11318771-G-C							*
17951299-ATTTTT-A,ATTTT	15839419-ATTTTT-A,ATTTT						25×T	*
28567333-ATT-A	26421186-ATT-A						13×T	*
	11029635-A-C							*
	56839699-C-A							*
	11029737-C-G							*
	11029744-T-G							*
	11029755-C-G							*
	11029757-A-G							*
	11029770-C-T							*
13487732-C-T	11332056-C-T							*
21221977-T-TA	19060091-T-TA						10×A	*
13472205-G-A	11316529-G-A							*
13336447-G-T	11180771-G-T							*
13336459-G-T	11180783-G-T							*
13465985-A-C	11310309-A-C							*
13474609-C-A	11318933-C-A							*
13465935-G-A	11310259-G-A							*
	56845393-G-C							*
	56839689-T-A							*
15399419-GAAA-G	13287539-GAAA-G						15×A	*
9944139-G-A	10106530-G-A				Y			*
22447497-C-G	20285611-C-G			DYZ19				*
28549748-G-T	26403601-G-T							*
22476805-T-G	20314919-T-G		BY223657	DYZ19				*
22448764-G-A	20286878-G-A			DYZ19				*
13487441-G-A	11331765-G-A							*
22317325-C-A	20155439-C-A			DYZ19				*
22483947-A-T	20322061-A-T			DYZ19				*
58893731-T-C	56697140-A-G							*
13529380-A-AG	11373704-A-AG							*
58979510-C-CTCCACACCATTCCAT,CTCCATTCCATTCCATTCTACTCCATTCCAT	56833363-C-CTCCACACCATTCCAT,CTCCATTCCATTCCATTCTACTCCATTCCAT							*
13482307-A-T	11326631-A-T							*
13476193-T-C,G	11320517-T-C,G							*
17800319-C-CT	15688439-C-CT						9×T	*
	56839682-GA-G							*
22255980-A-G	20094094-A-G			DYZ19				*
9962446-T-G	10124837-T-G				Y			*
19270710-CAA-C	17158830-CAA-C						12×A	*
22508009-G-T	20346123-G-T			DYZ19				*
7409901-TAAA-T	7541860-TAAA-T						19×A	*
13463995-G-C	11308319-G-C							*
	10942775-C-T							*
17589287-A-AT	15477407-A-AT						10×T	*
13500346-GTTTA-G	11344670-GTTTA-G						5×TTTA	*
	10908406-C-G							*
15753179-T-TC	13641299-T-TC							*
	56839675-C-G							*
	56839677-T-C							*
13223256-AAGGG-A	11067580-AAGGG-A						4×AGGG	*
7468573-C-G	7600532-C-G			IR1_L				*
13708679-G-T	11553003-G-T							*
13721022-G-C	11565346-G-C							*
26538455-C-A	24392308-C-A			P1_g2				*
13218966-CAAA-C,CAA	11063290-CAAA-C,CAA						21×A	*
13585175-G-A	11429499-G-A							*
22430300-T-A	20268414-T-A			DYZ19				*
2702975-G-GTT	2834934-G-GTT						11×T	*
13468454-T-C	11312778-T-C							*
14937028-A-AT	12825093-A-AT						9×T	*
13480625-G-C	11324949-G-C							*
4997479-AACAC-A	5129438-AACAC-A						11×AC	*
8616020-C-CT	8747979-C-CT						10×T	*
	10846970-A-T							*
22204412-G-A	20042526-G-A				Y			*
8475629-GT-G	8607588-GT-G						10×T	*
22536303-G-GA	20374417-G-GA						8×A	*
6052506-C-CT	6184465-C-CT						9×T	*
17925209-AT-A	15813329-AT-A						9×T	*
14588247-TTC-T	12476447-TTC-T							*
10034735-A-C	10197126-A-C				Y			*
22812659-C-A	20650773-C-A				Y	Y		*
7117600-A-AT	7249559-A-AT						9×T	*
18128207-C-CAA	16016327-C-CAA						16×A	*
9440845-G-GA	9603236-G-GA						8×A	*
13468060-G-T	11312384-G-T							*
	11026246-A-AC							*
8468065-CA-C,CAA	8600024-CA-C,CAA						24×A	*
5599202-AT-A	5731161-AT-A						9×T	*
	11015866-ACCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATT-A							*
13748406-T-C	11592730-T-C							*
13977178-A-G	11856472-A-G				Y			*
10062593-G-A	10224984-G-A							*
14604590-CTT-C,CTTT	12492792-CTT-C,CTTT						21×T	*
13485754-C-T	11330078-C-T							*
18082920-G-GTT	15971040-G-GTT						11×T	*
3990683-G-GA	4122642-G-GA						9×A	*
22177716-CT-C	20015830-CT-C						9×T	*
	10660274-TTTCCA-T							*
13488908-C-A	11333232-C-A							*
13465934-G-C	11310258-G-C							*
14297017-C-CA	12176311-C-CA						8×A	*
13472046-A-G	11316370-A-G		FT444075					*
17169703-A-G	15057823-A-G				Y	Y		*
	10669559-A-T							*
13466395-A-G	11310719-A-G							*
8568465-GTT-G,GT	8700424-GTT-G,GT						22×T	*
13977174-T-C	11856468-T-C				Y			*
	10908405-T-C							*
13712013-G-T	11556337-G-T	FGC23105	BY43226					*
13474687-G-A	11319011-G-A							*
13463727-C-A	11308051-C-A							*
13480613-G-T	11324937-G-T							*
27506515-C-CA	25360368-C-CA			P1_Y2			24×A	*
13489299-G-T	11333623-G-T							*
13489351-G-A	11333675-G-A							*
13463131-T-A	11307455-T-A							*
9984669-C-G	10147060-C-G				Y			*
9984674-A-G	10147065-A-G				Y			*
13466527-T-A	11310851-T-A							*
13474388-G-A	11318712-G-A							*
17169686-C-T	15057806-C-T		BY112774		Y	Y		*
3311746-C-T	3443705-C-T		FGC50856					*
17490081-C-CAA	15378201-C-CAA						14×A	*
22489691-G-A	20327805-G-A			DYZ19				*
13449351-C-CCTAAA	11293675-C-CCTAAA							*
13486806-C-T	11331130-C-T							*
13486863-A-T	11331187-A-T							*
13518387-T-C	11362711-T-C							*
13518424-G-C	11362748-G-C							*
13518490-G-C	11362814-G-C		FGC281 Y133723					*
13538350-C-A	11382674-C-A							*
16357324-C-CAT	14245444-C-CAT							*
16635364-TAC-T	14523484-TAC-T							*
21758003-CAG-C	19596117-CAG-C							*
22477612-T-A	20315726-T-A		BY174798	DYZ19				*
22484004-G-C	20322118-G-C			DYZ19				*
23105948-C-A	20944062-C-A		FT390749		Y			*
13400069-C-T	11244393-C-T							*
28586429-T-C	26440282-T-C							*
28780709-A-C	26634562-A-C							*
13476120-G-A	11320444-G-A							*
13472038-G-T	11316362-G-T							*
13608469-G-A	11452793-G-A							*
27714328-C-T	25568181-C-T			P1_Y2			15×T	*
13433261-TA-T	11277585-TA-T							*
13433282-T-TG	11277606-T-TG							*
13734740-C-A	11579064-C-A							*
9958028-AT-A	10120419-AT-A							*
22288235-G-A	20126349-G-A			DYZ19				*
2946522-C-T	3078481-C-T		FGC11435					*
9941204-C-A	10103595-C-A				Y			*
13418349-T-C	11262673-T-C							*
13354729-T-C	11199053-T-C							*
10034738-A-C	10197129-A-C				Y			*
13573061-A-G	11417385-A-G							*
23158148-GA-G	20996262-GA-G						10×A	*
22510476-G-T	20348590-G-T		FT90137	DYZ19				*
13704437-C-A	11548761-C-A							*
13484231-C-T	11328555-C-T							*
13593553-C-T	11437877-C-T							*
13593554-A-G	11437878-A-G							*
9304601-G-C	9466992-G-C				Y			*
22510450-T-G	20348564-T-G			DYZ19				*
22366433-G-C	20204547-G-C			DYZ19				*
22449441-T-A	20287555-T-A			DYZ19				*
22449461-C-A	20287575-C-A			DYZ19				*
22449462-T-G	20287576-T-G			DYZ19				*
24326954-TACAC-T	22180807-TACAC-T			P3_t1			19×AC	*
13258632-G-A	11102956-G-A							*
13470299-C-T	11314623-C-T							*
4319180-CTAGGTAAT-C	4451139-CTAGGTAAT-C							*
13258631-G-A	11102955-G-A							*
22258136-C-A	20096250-C-A		BY24917	DYZ19				*
3062015-T-A	3193974-T-A							*
3483889-A-G	3615848-A-G							*
4303101-G-C	4435060-G-C							*
5564088-A-G	5696047-A-G							*
5966753-A-C	6098712-A-C							*
9381376-AAC-A	9543767-AAC-A							*
10062563-G-C	10224954-G-C							*
13252781-CA-C	11097105-CA-C							*
13258614-TC-T	11102938-TC-T							*
10029249-G-T	10191640-G-T				Y			*
13254537-A-T	11098861-A-T							*
13478459-C-T	11322783-C-T							*
24504679-CGTGT-C	22358532-CGTGT-C						14×GT	*
13470368-C-T	11314692-C-T							*
13474613-C-G	11318937-C-G							*
15558431-GAGATAGATAGAT-G,GAGAT	13446551-GAGATAGATAGAT-G,GAGAT						17×AGAT	*
13480984-C-T	11325308-C-T							*
13464966-T-A,C	11309290-T-A,C							*
13734754-T-G	11579078-T-G							*
13734761-G-C	11579085-G-C							*
5248619-ATTT-A	5380578-ATTT-A						19×T	*
13712047-T-C	11556371-T-C							*
9997063-A-C	10159454-A-C		A11740		Y			*
13704446-A-G	11548770-A-G							*
58905117-A-T	56685754-T-A							*
14105729-T-TA	11985023-T-TA						10×A	*
22510419-C-A	20348533-C-A			DYZ19				*
13466512-C-T	11310836-C-T							*
13466537-C-A	11310861-C-A							*
13466591-C-A	11310915-C-A							*
10029207-A-T	10191598-A-T				Y			*
13518488-G-T	11362812-G-T							*
13518489-A-C	11362813-A-C							*
59005360-T-TAA	56859213-T-TAA						8×A	*
13711545-A-G	11555869-A-G							*
22288255-G-T	20126369-G-T			DYZ19				*
13480361-C-T	11324685-C-T							*
10062586-G-A	10224977-G-A							*
15191680-C-CT	13079766-C-CT						9×T	*
13707996-C-G	11552320-C-G		BY89372					*
13480973-C-T	11325297-C-T		FGC13253					*
13485736-C-G	11330060-C-G							*
13266414-C-T	11110738-C-T							*
58980708-TCCATTCCATTCCAC-T	56834561-TCCATTCCATTCCAC-T							*
13270742-A-G	11115066-A-G							*
13303013-G-A	11147337-G-A							*
13314946-G-A	11159270-G-A							*
13354716-T-C	11199040-T-C							*
13423074-A-T	11267398-A-T							*
13706568-G-A	11550892-G-A		FT268475					*
13706637-G-A	11550961-G-A	BY36494	BY36499					*
13706853-G-A	11551177-G-A							*
15131897-CCT-C	13019984-CCT-C							*
19113775-T-C	17001895-T-C				Y	Y		*
22270391-A-G	20108505-A-G			DYZ19				*
22508092-G-T	20346206-G-T		BY225433	DYZ19				*
58970507-T-A	56824360-T-A							*
58982257-T-TCACTC	56836110-T-TCACTC						4×CACTC	*
13489310-G-T	11333634-G-T							*
59000821-T-C	56854674-T-C							*
59002825-CAAA-C	56856678-CAAA-C							*
59013931-C-G	56867784-C-G							*
59023437-A-C	56877290-A-C							*
59024222-G-T	56878075-G-T							*
59032893-A-G	56886746-A-G							*
13480091-C-T	11324415-C-T							*
25080053-C-CAA	22933906-C-CAA			g1			20×A	*
22488117-T-A	20326231-T-A		F25205	DYZ19				*
15543492-C-CA	13431612-C-CA						10×A	*
58893713-G-T	56697158-C-A							*
13399871-G-T	11244195-G-T							*
13489309-G-A	11333633-G-A							*
	56860703-G-A							*
8535370-CAA-C	8667329-CAA-C						11×A	*
22448751-T-A	20286865-T-A			DYZ19				*
	56826966-A-ATTT							*
13718773-C-G,G	11563097-C-G,G							*
	56825934-T-TAATTCCATTCGATTGCATTCCATTCGATTGCATTCCATTCGATTGCATTCCATTCGATTG							*
9958035-T-A	10120426-T-A				Y			*
9958039-G-A	10120430-G-A				Y			*
	10669556-T-C							*
13470913-C-CCGCCGT	11315237-C-CCGCCGT							*
13474413-C-T	11318737-C-T							*
13474436-T-C	11318760-T-C							*
13474444-C-A	11318768-C-A							*
13694929-G-A,A	11539253-G-A,A							*
22476686-A-T	20314800-A-T			DYZ19				*
28818057-T-G,G	26671910-T-G,G							*
	56844430-T-A,A							*
13489705-A-ACATG	11334029-A-ACATG							*
	56851299-A-AAGACATATCTCTGCACTGATCACCCCAGGGAGAGAATTCTTGTTTAGGCTCTGCCTACAGGGGGCTTTG							*
	56856658-G-GA							*
	56860676-A-ACAC							*
9946235-TC-T	10108626-TC-T							*
	11018936-G-GCA							*
	11018938-T-TCCA							*
13474286-C-T	11318610-C-T							*
13478665-CAA-C	11322989-CAA-C							*
13478669-C-CCA	11322993-C-CCA							*
13480280-C-G	11324604-C-G							*
13480932-G-T	11325256-G-T							*
	56832098-C-CA							*
	56832100-C-CCCAT							*
13699106-AGAATG-A	11543430-AGAATG-A						4×GAATG	*
13489697-GTGCCC-G	11334021-GTGCCC-G							*
13351971-A-G	11196295-A-G							*
6648029-C-T	6779988-C-T				Y	Y		*
	10846985-C-T							*
13339632-G-T	11183956-G-T							*
13339666-T-C	11183990-T-C							*
13478929-C-T	11323253-C-T							*
22509512-G-C	20347626-G-C			DYZ19				*
13531775-AAC-A	11376099-AAC-A							*
13476529-TC-T	11320853-TC-T							*
13479222-G-C	11323546-G-C							*
4315651-A-G	4447610-A-G							*
18290815-CA-C,CAA	16178935-CA-C,CAA			P6_Prx			20×A	*
19513143-CT-C,CTT	17401263-CT-C,CTT						20×T	*
5232664-TA-T	5364623-TA-T						9×A	*
28526659-T-TAA	26380512-T-TAA						12×A	*
13474363-C-T	11318687-C-T							*
13339625-C-T	11183949-C-T							*
13356647-G-GA	11200971-G-GA						8×A	*
17787106-CAAA-C,CAA	15675226-CAAA-C,CAA						19×A	*
22477630-T-A	20315744-T-A			DYZ19				*
22477642-G-T	20315756-G-T		BY223857	DYZ19				*
4493072-G-T	4625031-G-T							*
5986601-T-G	6118560-T-G							*
5986607-T-G	6118566-T-G							*
	10908296-C-T							*
3712813-T-TGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	3844772-T-TGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA							*
13420058-C-T	11264382-C-T							*
13449747-TCC-T	11294071-TCC-T							*
13449750-ATTC-A	11294074-ATTC-A							*
13340914-C-T	11185238-C-T							*
13378665-C-A	11222989-C-A							*
	10918013-A-T							*
13469944-CCAT-C	11314268-CCAT-C							*
13469366-A-G	11313690-A-G							*
14650802-C-CA	12538867-C-CA						9×A	*
	10624743-A-G							*
8993805-T-TA	9156196-T-TA						9×A	*
13480969-C-G	11325293-C-G							*
20242393-C-G	18080507-C-G			P5_Dst				*
22364674-A-T	20202788-A-T			DYZ19				*
22364676-G-T	20202790-G-T			DYZ19				*
22364684-TC-T	20202798-TC-T			DYZ19				*
22505730-G-A	20343844-G-A			DYZ19				*
	10908299-CCT-C							*
13433308-C-G	11277632-C-G							*
13469995-C-A	11314319-C-A							*
13483869-A-G	11328193-A-G							*
13478443-G-T	11322767-G-T							*
13479109-G-A	11323433-G-A							*
13479113-C-T	11323437-C-T							*
13479123-G-GACA	11323447-G-GACA							*
13479155-T-A	11323479-T-A							*
13480924-A-C	11325248-A-C							*
13463749-A-T	11308073-A-T							*
13484223-C-A	11328547-C-A							*
13484225-C-A	11328549-C-A							*
13484908-T-A	11329232-T-A							*
13695185-C-A	11539509-C-A							*
13698922-G-C	11543246-G-C							*
22288073-GTGT-G	20126187-GTGT-G			DYZ19				*
13484089-T-G	11328413-T-G							*
	56835612-T-C,C							*
13449064-AC-A	11293388-AC-A							*
13711573-A-G	11555897-A-G							*
13449772-TC-T	11294096-TC-T							*
13463771-C-T	11308095-C-T							*
13469400-C-G	11313724-C-G							*
13469598-A-G	11313922-A-G							*
13469613-G-A	11313937-G-A							*
13469616-G-T	11313940-G-T							*
13470334-C-CT	11314658-C-CT							*
13470348-CACA-C	11314672-CACA-C							*
13470360-G-T	11314684-G-T							*
13474380-G-A	11318704-G-A							*
13478052-G-C	11322376-G-C							*
13479096-C-T	11323420-C-T							*
13740226-T-A	11584550-T-A							*
22288071-T-TTAG	20126185-T-TTAG			DYZ19				*
	56839634-G-GAC							*
	56839635-CAT-C							*
10057157-A-G	10219548-A-G							*
13261497-G-A	11105821-G-A							*
13436740-TTA-T	11281064-TTA-T							*
13444667-G-T	11288991-G-T							*
13466355-A-C	11310679-A-C							*
13466409-A-G	11310733-A-G							*
13474386-C-G	11318710-C-G							*
13478042-G-A	11322366-G-A							*
13484219-A-T	11328543-A-T							*
13245158-G-C	11089482-G-C							*
13464984-G-T	11309308-G-T							*
	10918018-A-T							*
28542416-CAA-C,CA	26396269-CAA-C,CA						17×A	*
3301243-TTATA-T	3433202-TTATA-T						8×TA	*
28786400-G-T	26640253-G-T							*
13436739-G-C	11281063-G-C							*
13464986-C-A	11309310-C-A							*
13468416-T-C	11312740-T-C							*
13474277-C-A	11318601-C-A							*
13480963-G-A	11325287-G-A							*
13481000-G-T	11325324-G-T							*
13481022-T-C	11325346-T-C							*
13483629-T-A	11327953-T-A							*
13505936-A-G	11350260-A-G							*
13712704-G-A	11557028-G-A							*
13740232-G-A	11584556-G-A							*
22511043-A-G	20349157-A-G			DYZ19				*
28817614-C-G	26671467-C-G							*
4880706-A-T	5012665-A-T							*
10029240-C-T	10191631-C-T				Y			*
	10908302-G-A							*
13469962-G-A	11314286-G-A							*
13478260-T-G	11322584-T-G							*
13483705-C-G	11328029-C-G							*
13487328-C-T	11331652-C-T							*
13489228-G-T	11333552-G-T							*
13518365-C-T	11362689-C-T							*
13722971-T-C	11567295-T-C							*
22484074-A-T	20322188-A-T			DYZ19				*
28582612-G-A	26436465-G-A							*
	56859243-T-G							*
	56854789-G-A							*
13374406-C-T	11218730-C-T							*
4776622-A-AACAC	4908581-A-AACAC						20×AC	*
13734236-C-A	11578560-C-A							*
21039096-C-CA	18877210-C-CA						10×A	*
	10776038-T-TG							*
	10776039-C-CAACG							*
	10846969-A-G							*
13481031-A-T	11325355-A-T							*
	56873067-G-T							*
13463738-C-A	11308062-C-A							*
5059208-C-G	5191167-C-G							*
13466113-T-C	11310437-T-C							*
13461261-C-T	11305585-C-T							*
13469975-C-A	11314299-C-A							*
13734117-G-T	11578441-G-T							*
14818128-TA-T	12706199-TA-T						9×A	*
13463774-G-A	11308098-G-A							*
3333291-AT-A	3465250-AT-A						8×T	*
13465719-C-T	11310043-C-T							*
	10669548-C-G							*
13487386-C-G	11331710-C-G							*
4268175-C-T	4400134-C-T							*
5325772-C-T	5457731-C-T							*
13468384-G-C,T	11312708-G-C,T							*
7534646-A-C	7666605-A-C				Y	Y		*
13246480-GA-G	11090804-GA-G							*
58974481-C-CA	56828334-C-CA							*
58980706-AC-A	56834559-AC-A							*
59006822-A-AC	56860675-A-AC							*
5871981-G-A	6003940-G-A		BY58927					*
3240355-ATTTT-A	3372314-ATTTT-A						19×T	*
13479102-T-G	11323426-T-G							*
16773429-T-G	14661549-T-G				Y	Y		*
22512552-G-T	20350666-G-T			DYZ19				*
5059192-C-G	5191151-C-G							*
13480347-G-A	11324671-G-A							*
4618457-C-T	4750416-C-T		FT7552					*
3449187-A-G	3581146-A-G							*
13461266-A-C	11305590-A-C							*
13405833-G-A	11250157-G-A							*
13470005-A-C	11314329-A-C							*
13470013-A-G	11314337-A-G							*
13470054-G-C	11314378-G-C							*
22483988-G-T	20322102-G-T			DYZ19				*
13470656-GTCT-G	11314980-GTCT-G							*
13478923-C-T	11323247-C-T							*
13605019-CA-C	11449343-CA-C						10×A	*
22288244-C-A	20126358-C-A			DYZ19				*
9964967-G-C	10127358-G-C				Y			*
4370462-TA-T	4502421-TA-T							*
7483638-TAA-T	7615597-TAA-T			IR1_L			23×A	*
13339626-C-G	11183950-C-G							*
13410455-A-G	11254779-A-G							*
13436701-T-A	11281025-T-A							*
9984690-A-C	10147081-A-C				Y			*
13417521-G-C	11261845-G-C							*
13528494-A-G	11372818-A-G							*
9944114-C-T	10106505-C-T				Y			*
13417529-G-A	11261853-G-A							*
5406828-T-C	5538787-T-C							*
13339641-G-A	11183965-G-A							*
17332750-C-CA,CAAA	15220870-C-CA,CAAA						22×A	*
13474279-T-A	11318603-T-A							*
13476558-C-T	11320882-C-T							*
13549902-GTGTGTC-G	11394226-GTGTGTC-G							*
	56859714-G-C							*
22484060-T-G	20322174-T-G			DYZ19				*
22484065-A-G	20322179-A-G			DYZ19				*
22484069-C-T	20322183-C-T			DYZ19				*
4116812-C-G	4248771-C-G							*
3970985-CT-C,CTT	4102944-CT-C,CTT						17×T	*
13420047-C-A	11264371-C-A							*
9946217-T-C	10108608-T-C				Y			*
9946220-C-T	10108611-C-T				Y			*
9946225-G-C	10108616-G-C				Y			*
9994748-T-G	10157139-T-G				Y			*
10062628-T-G	10225019-T-G							*
13378654-T-A	11222978-T-A							*
13378664-G-T	11222988-G-T							*
4106178-C-T	4238137-C-T							*
13476552-G-T	11320876-G-T							*
13246559-T-C	11090883-T-C							*
13378265-C-A	11222589-C-A							*
13406862-A-G	11251186-A-G							*
13479154-C-A	11323478-C-A							*
5303229-A-G	5435188-A-G		FGC69293					*
15177245-T-TA	13065331-T-TA						9×A	*
7124388-C-CAA	7256347-C-CAA						17×A	*
9941595-C-T	10103986-C-T				Y			*
13420038-C-T	11264362-C-T							*
13977176-T-C	11856470-T-C				Y			*
15912055-CTTT-C,CTT	13800175-CTTT-C,CTT						21×T	*
21091076-A-G	18929190-A-G				Y	Y		*
28795191-G-C	26649044-G-C							*
	56856958-T-A							*

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

	All	McDonald	YFull
Kit: B161416	15611508	9363788	8264475
Used in age calculations	15611508	9363788	8264475
Counts of SNPs		169	69

Variant counts last updated 2023-03-26 03:06:04.

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