Henderson

YDW-Kane-BY3: GJ35XEKY
MDKA Birth: Scotland 1857

Tree Position

R-P312/S116 > Z46521 > Z46516 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217 > S25783 > CTS4065 > 15548847GACAC-G > FGC15710 > CTS10029 > BY3190 > FGC29721 > FT33763 > FT128116

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRYDW-Kane-BY3
GJ35XEKY
hg19:Y:23801733-C-CAAAA hg38:Y:21639847-C-CAAAA 31×A+
hg19:Y:21402181-C-CTTTTTTT hg38:Y:19240295-C-CTTTTTTT 34×T+
hg38:Y:10961479-C-T +
hg38:Y:11643726-T-TTGGAA DYZ17 +
hg38:Y:10961478-A-T +
hg38:Y:10646051-ACCATT-A +
hg38:Y:10756735-AT-A +
hg38:Y:10756741-C-A +
hg38:Y:10756744-C-CCT +
hg38:Y:10756746-A-C +
hg38:Y:10756748-C-T +
hg38:Y:10756749-GT-G +
hg38:Y:10756753-A-T +
hg38:Y:10756756-ACGCCT-A +
hg38:Y:10756767-C-T +
hg38:Y:10760350-T-TACTCCATTCCACTCCACTCCACTTCATTCCATTACACTGCATTCCGAATGATTCCACTACTTTCCATTCCATTTCACTCCATTCCACTCCATTCCATTCCACTGC +
hg38:Y:10763233-T-TTTCATTCCACTCCACTCCATTCCACTCCACTCCATTCCATTCCATTCCACTTCATTCCATTCTATTCCATTACATTCCTTTCCAC +
hg38:Y:10985416-T-TTCCATTCCATTCCCTTCCAATCCACTCTATTCCATTCCACTCCACTCCATTCCACTCCACTCCTCTCCATTCCACTCCACTCCTCTCCATTCCACTCCACTCCAGTCAAC +
hg38:Y:10961491-C-T +
hg38:Y:10969985-A-AC +
hg38:Y:10969986-T-TTCACTCCAC +
hg19:Y:22802868-A-ATTTTTT hg38:Y:20640982-A-ATTTTTT 32×T+
hg38:Y:10958315-ATT-A +
hg19:Y:22287953-G-A hg38:Y:20126067-G-A DYZ19 +
hg19:Y:21112410-TACAC-T hg38:Y:18950524-TACAC-T 17×AC*
hg19:Y:27981744-AT-A hg38:Y:25835597-AT-A P1_Y2 10×T*
hg19:Y:23298091-C-CT hg38:Y:21136205-C-CT 10×T*
hg19:Y:13450443-C-G hg38:Y:11294767-C-G *
hg19:Y:13478350-G-A hg38:Y:11322674-G-A *
hg19:Y:22723386-C-CAA hg38:Y:20561500-C-CAA 17×A*
hg19:Y:8549032-G-GTT hg38:Y:8680991-G-GTT 23×T*
hg19:Y:16051847-TA-T hg38:Y:13939967-TA-T 10×A*
hg19:Y:13489708-G-A hg38:Y:11334032-G-A *
hg19:Y:21438785-TAAA-T hg38:Y:19276899-TAAA-T 31×A*
hg19:Y:13489692-A-G hg38:Y:11334016-A-G *
hg19:Y:7534392-G-GTTT hg38:Y:7666351-G-GTTT 13×T*
hg19:Y:9972630-AT-A hg38:Y:10135021-AT-A *
hg19:Y:13489705-A-T hg38:Y:11334029-A-T *
hg19:Y:4044971-A-T hg38:Y:4176930-A-T FGC81652 *
hg19:Y:13489675-G-C hg38:Y:11333999-G-C *
hg19:Y:6863818-CTTTTTTTT-C hg38:Y:6995777-CTTTTTTTT-C 21×T*
hg19:Y:2666449-T-TAC hg38:Y:2798408-T-TAC 13×AC*
hg19:Y:13489659-C-T hg38:Y:11333983-C-T *
hg19:Y:2940194-A-T hg38:Y:3072153-A-T *
hg19:Y:3193883-T-C hg38:Y:3325842-T-C *
hg19:Y:3915369-G-A hg38:Y:4047328-G-A FT308096 *
hg19:Y:3928845-C-A hg38:Y:4060804-C-A *
hg19:Y:3932521-G-A hg38:Y:4064480-G-A *
hg19:Y:3945638-T-G hg38:Y:4077597-T-G *
hg19:Y:4191376-C-G hg38:Y:4323335-C-G *
hg19:Y:4303101-G-C hg38:Y:4435060-G-C *
hg19:Y:4712855-CA-C hg38:Y:4844814-CA-C 10×A*
hg19:Y:5468306-A-G hg38:Y:5600265-A-G *
hg19:Y:5842532-A-C hg38:Y:5974491-A-C *
hg19:Y:5906873-GCA-G hg38:Y:6038832-GCA-G 9×CA*
hg19:Y:6445011-C-G hg38:Y:6576970-C-G *
hg19:Y:6929159-G-T hg38:Y:7061118-G-T Y*
hg19:Y:8417400-CTG-C hg38:Y:8549359-CTG-C *
hg19:Y:8561618-CCA-C hg38:Y:8693577-CCA-C 8×CA*
hg19:Y:8883602-AAC-A hg38:Y:9015561-AAC-A 8×AC*
hg19:Y:18125730-GGAAA-G hg38:Y:16013850-GGAAA-G 6×GAAA*
hg19:Y:18708972-GTA-G hg38:Y:16597092-GTA-G *
hg19:Y:19131054-CAG-C hg38:Y:17019174-CAG-C *
hg19:Y:24573423-CTT-C hg38:Y:22427276-CTT-C P3_t2 21×T*
hg19:Y:3889019-CTT-C hg38:Y:4020978-CTT-C 15×T*
hg19:Y:3258964-T-C hg38:Y:3390923-T-C *
hg19:Y:3319786-ATC-A hg38:Y:3451745-ATC-A 8×TC*
hg19:Y:3915112-A-G hg38:Y:4047071-A-G *
hg19:Y:4499916-T-C hg38:Y:4631875-T-C *
hg19:Y:4554311-CAGGG-C hg38:Y:4686270-CAGGG-C 6×AGGG*
hg19:Y:5302561-ATC-A hg38:Y:5434520-ATC-A 9×TC*
hg19:Y:6929160-A-T hg38:Y:7061119-A-T Y*
hg19:Y:13349048-C-T hg38:Y:11193372-C-T FGC16807 *
hg19:Y:13477239-C-T hg38:Y:11321563-C-T *
hg19:Y:13628027-C-CTA hg38:Y:11472351-C-CTA *
hg19:Y:17250378-CCT-C hg38:Y:15138498-CCT-C *
hg19:Y:18924453-AAC-A hg38:Y:16812573-AAC-A 8×AC*
hg19:Y:18984948-TTC-T hg38:Y:16873068-TTC-T *
hg19:Y:19409391-C-CAA hg38:Y:17297511-C-CAA 22×A*
hg19:Y:22163646-ATG-A hg38:Y:20001760-ATG-A *
hg19:Y:28470598-CTA-C hg38:Y:26324451-CTA-C *
hg19:Y:58975626-C-T hg38:Y:56829479-C-T *
hg19:Y:59009291-T-A hg38:Y:56863144-T-A *
hg19:Y:14604590-CTTTTTTT-C hg38:Y:12492792-CTTTTTTT-C 21×T*
hg19:Y:4382449-CAAAA-C hg38:Y:4514408-CAAAA-C 17×A*
hg19:Y:22052900-C-CA hg38:Y:19891014-C-CA BY33010 10×A*
hg19:Y:18984861-G-GA hg38:Y:16872981-G-GA 10×A*
hg19:Y:3975905-A-AT hg38:Y:4107864-A-AT 10×T*
hg19:Y:13462324-G-A hg38:Y:11306648-G-A *
hg19:Y:13472035-A-G hg38:Y:11316359-A-G *
hg19:Y:13489717-C-T hg38:Y:11334041-C-T *
hg19:Y:21721165-CA-C hg38:Y:19559279-CA-C 10×A*
hg19:Y:18804474-AAGAG-A,AAG hg38:Y:16692594-AAGAG-A,AAG 26×AG*
hg19:Y:13477233-G-A hg38:Y:11321557-G-A *
hg19:Y:14809664-G-GT hg38:Y:12697735-G-GT 10×T*
hg19:Y:21034224-A-AT hg38:Y:18872338-A-AT 9×T*
hg19:Y:58982008-A-T hg38:Y:56835861-A-T *
hg19:Y:8160607-G-GA hg38:Y:8292566-G-GA 10×A*
hg19:Y:13942606-TAC-T hg38:Y:11821900-TAC-T 9×AC*
hg19:Y:6774803-CTT-C hg38:Y:6906762-CTT-C 12×T*
hg19:Y:13450000-CTCCACTCCACTCCCG-C hg38:Y:11294324-CTCCACTCCACTCCCG-C *
hg19:Y:3009913-C-T hg38:Y:3141872-C-T Y133940 FGC74230 *
hg19:Y:9583457-CT-C hg38:Y:9745848-CT-C IR3_Prx 10×T*
hg19:Y:23234708-CTTCTTTCT-C,CTTCT hg38:Y:21072822-CTTCTTTCT-C,CTTCT 17×TTCT*
hg19:Y:4071991-AACAC-A hg38:Y:4203950-AACAC-A 14×AC*
hg19:Y:13489643-C-T hg38:Y:11333967-C-T *
hg19:Y:7235770-A-AT hg38:Y:7367729-A-AT 10×T*
hg19:Y:58979606-A-T hg38:Y:56833459-A-T *
hg19:Y:6843943-CGTGT-C hg38:Y:6975902-CGTGT-C 13×GT*
hg19:Y:13259210-G-T hg38:Y:11103534-G-T *
hg19:Y:6179553-G-T hg38:Y:6311512-G-T IR3_Dst *
hg19:Y:28805303-G-A hg38:Y:26659156-G-A *
hg19:Y:4505403-A-G hg38:Y:4637362-A-G *
hg38:Y:56830319-A-ATTCCACTCCATTCCT *
hg19:Y:6928381-CT-C hg38:Y:7060340-CT-C 10×T*
hg19:Y:18839340-T-C hg38:Y:16727460-T-C YY*
hg19:Y:23590764-CA-C,CAA hg38:Y:21428878-CA-C,CAA 15×A*
hg19:Y:9784808-G-GA hg38:Y:9947199-G-GA 11×A*
hg19:Y:19352848-G-GT hg38:Y:17240968-G-GT 9×T*
hg19:Y:14224265-CT-C hg38:Y:12103559-CT-C 10×T*
hg19:Y:21224779-AT-A,ATT hg38:Y:19062893-AT-A,ATT 19×T*
hg19:Y:3990664-CAAAA-C hg38:Y:4122623-CAAAA-C 18×A*
hg19:Y:13478209-C-T hg38:Y:11322533-C-T *
hg19:Y:13478280-C-T hg38:Y:11322604-C-T *
hg19:Y:14054983-G-GA hg38:Y:11934277-G-GA 10×A*
hg19:Y:3063726-T-TA hg38:Y:3195685-T-TA 13×A*
hg19:Y:13489525-C-T hg38:Y:11333849-C-T *
hg19:Y:2861534-C-CA hg38:Y:2993493-C-CA 25×A*
hg19:Y:16590873-C-CAA hg38:Y:14478993-C-CAA 17×A*
hg19:Y:18365541-ATGTG-A,ATG hg38:Y:16253661-ATGTG-A,ATG P6_Prx 20×TG*
hg19:Y:6874882-CA-C hg38:Y:7006841-CA-C 9×A*
hg19:Y:19395643-T-TA hg38:Y:17283763-T-TA 10×A*
hg19:Y:9139765-G-GT hg38:Y:9302156-G-GT 9×T*
hg19:Y:6890291-G-GTT hg38:Y:7022250-G-GTT 13×T*
hg19:Y:18994617-GGA-G hg38:Y:16882737-GGA-G *
hg19:Y:17092796-ATT-A hg38:Y:14980916-ATT-A 13×T*
hg38:Y:10661716-T-C *
hg19:Y:8309492-AT-A hg38:Y:8441451-AT-A 10×T*
hg19:Y:4213860-ATG-A hg38:Y:4345819-ATG-A 12×TG*
hg19:Y:3545723-C-CA hg38:Y:3677682-C-CA 11×A*
hg19:Y:21415991-G-GA hg38:Y:19254105-G-GA 10×A*
hg19:Y:3816689-CTT-C hg38:Y:3948648-CTT-C 12×T*
hg19:Y:6493953-CAAA-C hg38:Y:6625912-CAAA-C 19×A*
hg19:Y:17994874-C-CA hg38:Y:15882994-C-CA P7_Prx 39×A*
hg19:Y:21623809-G-T hg38:Y:19461923-G-T YY*
hg19:Y:23856895-G-GA hg38:Y:21695009-G-GA 10×A*
hg38:Y:10661710-A-ACTTTAC *
hg38:Y:10661721-T-C *
hg38:Y:10661731-C-T *
hg19:Y:19042179-CAAAAA-C hg38:Y:16930299-CAAAAA-C 17×A*
hg38:Y:10662970-C-A *
hg19:Y:13458729-T-A hg38:Y:11303053-T-A *
hg19:Y:13489806-C-A hg38:Y:11334130-C-A *
hg19:Y:22101029-AC-A hg38:Y:19939143-AC-A *
hg19:Y:17284532-CTTT-C,CTT hg38:Y:15172652-CTTT-C,CTT 21×T*
hg19:Y:20569653-G-T hg38:Y:18407767-G-T P5_Dst *
hg19:Y:3303468-A-AT hg38:Y:3435427-A-AT 10×T*
hg19:Y:15969956-TAAA-T,TAAAA hg38:Y:13858076-TAAA-T,TAAAA 20×A*
hg19:Y:3706014-T-TA hg38:Y:3837973-T-TA 10×A*
hg19:Y:3620188-G-GT hg38:Y:3752147-G-GT 10×T*
hg19:Y:9537704-C-CTG hg38:Y:9700095-C-CTG IR3_Prx 8×TG*
hg38:Y:12869906-TTTCCTTCCTTCC-T 14×TTCC*
hg19:Y:15593274-CA-C,CAA hg38:Y:13481394-CA-C,CAA 23×A*
hg19:Y:17678621-CTT-C,CT hg38:Y:15566741-CTT-C,CT 26×T*
hg19:Y:4460910-TTCTC-T hg38:Y:4592869-TTCTC-T *
hg19:Y:5854566-CAA-C hg38:Y:5986525-CAA-C 16×A*
hg19:Y:14693111-CT-C hg38:Y:12581177-CT-C 8×T*
hg19:Y:3079561-TAAA-T hg38:Y:3211520-TAAA-T 18×A*
hg19:Y:4907850-AT-A hg38:Y:5039809-AT-A 10×T*
hg19:Y:13690157-A-C hg38:Y:11534481-A-C DYZ17 *
hg19:Y:15592550-CAA-C,CA hg38:Y:13480670-CAA-C,CA 22×A*
hg19:Y:20840711-CA-C hg38:Y:18678825-CA-C P4_Gap 8×A*
hg19:Y:13489850-C-A hg38:Y:11334174-C-A *
hg38:Y:56871593-A-G *
hg19:Y:6179588-C-A hg38:Y:6311547-C-A IR3_Dst *
hg19:Y:13489802-C-A hg38:Y:11334126-C-A *
hg19:Y:13489814-G-C hg38:Y:11334138-G-C *
hg19:Y:13246182-G-C hg38:Y:11090506-G-C *
hg19:Y:8052324-C-A hg38:Y:8184283-C-A Y*
hg19:Y:14068352-CT-C hg38:Y:11947646-CT-C 9×T*
hg19:Y:5111539-A-AT hg38:Y:5243498-A-AT 12×T*
hg19:Y:13605019-C-CA hg38:Y:11449343-C-CA 10×A*
hg38:Y:10889373-A-C *
hg19:Y:6179571-C-A hg38:Y:6311530-C-A IR3_Dst *
hg19:Y:6179584-G-T hg38:Y:6311543-G-T IR3_Dst *
hg38:Y:10678022-C-CG *
hg38:Y:10678024-T-TCCACTCCAC *
hg38:Y:56829179-C-A *
hg19:Y:24496621-G-GA hg38:Y:22350474-G-GA BY41286 9×A*
hg19:Y:13349045-T-G hg38:Y:11193369-T-G *
hg19:Y:13374277-GA-G hg38:Y:11218601-GA-G 13×A*
hg19:Y:28805688-G-C hg38:Y:26659541-G-C *
hg19:Y:28805690-G-A hg38:Y:26659543-G-A *
hg19:Y:19034568-G-GA hg38:Y:16922688-G-GA 9×A*
hg19:Y:13474089-C-A hg38:Y:11318413-C-A *
hg19:Y:4834245-T-TA,TAA hg38:Y:4966204-T-TA,TAA 23×A*
hg19:Y:5858687-C-T hg38:Y:5990646-C-T FGC69304 *
hg19:Y:4571069-CAA-C hg38:Y:4703028-CAA-C 13×A*
hg19:Y:5528961-T-TA hg38:Y:5660920-T-TA 11×A*
hg38:Y:56829507-GTCCAT-G,GTCCATTCCAT 4×TCCAT*
hg38:Y:56858546-TTA-T *
hg38:Y:10992268-TTCCAC-T *
hg19:Y:3271448-T-C hg38:Y:3403407-T-C *
hg19:Y:22019213-AT-A hg38:Y:19857327-AT-A 9×T*
hg19:Y:5772552-C-CT hg38:Y:5904511-C-CT 10×T*
hg19:Y:13489672-G-T hg38:Y:11333996-G-T *
hg19:Y:20569648-G-T hg38:Y:18407762-G-T P5_Dst *
hg19:Y:22551456-T-C hg38:Y:20389570-T-C YY*
hg19:Y:9798081-C-A hg38:Y:9960472-C-A YY*
hg19:Y:24381391-C-CA hg38:Y:22235244-C-CA 11×A*
hg19:Y:5900371-A-G hg38:Y:6032330-A-G *
hg19:Y:17669635-T-C hg38:Y:15557755-T-C YY*
hg19:Y:14552175-T-TAA hg38:Y:12440376-T-TAA 13×A*
hg38:Y:56855383-TC-T *
hg19:Y:8182205-CAA-C,CAAA hg38:Y:8314164-CAA-C,CAAA 18×A*
hg19:Y:18447651-C-A hg38:Y:16335771-C-A P6_Dst *
hg19:Y:13462334-C-CCAAT hg38:Y:11306658-C-CCAAT *
hg38:Y:56833283-CTCCATTCCATTCCACTCCAT-C *
hg19:Y:19609407-G-T hg38:Y:17497527-G-T P5_Prx Y*
hg19:Y:3912233-C-CT hg38:Y:4044192-C-CT 14×T*
hg19:Y:9127506-CT-C,CTT hg38:Y:9289897-CT-C,CTT 22×T*
hg19:Y:6179583-A-T hg38:Y:6311542-A-T IR3_Dst *
hg19:Y:22920605-CTTTTT-C,CTTT hg38:Y:20758719-CTTTTT-C,CTTT 25×T*
hg19:Y:6024584-G-A hg38:Y:6156543-G-A *
hg19:Y:8616329-CT-C hg38:Y:8748288-CT-C 9×T*
hg19:Y:7244754-TA-T hg38:Y:7376713-TA-T 10×A*
hg19:Y:28596698-G-GTTT hg38:Y:26450551-G-GTTT 24×T*
hg38:Y:10673916-TCCATTCCATTCCATTCCATTCCATTGCACC-T *
hg19:Y:14635669-G-A hg38:Y:12523738-G-A YY*
hg38:Y:10663429-TCACTCCAC-T *
hg19:Y:13483387-C-G hg38:Y:11327711-C-G *
hg19:Y:5598178-G-GT hg38:Y:5730137-G-GT 10×T*
hg19:Y:16010265-C-A hg38:Y:13898385-C-A Y*
hg19:Y:13474104-C-G hg38:Y:11318428-C-G *
hg19:Y:13488486-A-C hg38:Y:11332810-A-C *
hg19:Y:13488500-A-T hg38:Y:11332824-A-T *
hg19:Y:13472034-C-T hg38:Y:11316358-C-T *
hg19:Y:5399476-G-A hg38:Y:5531435-G-A *
hg19:Y:5986595-GTT-G hg38:Y:6118554-GTT-G 28×T*
hg19:Y:27022287-CT-C hg38:Y:24876140-CT-C P1_r4 9×T*
hg19:Y:6076711-C-T hg38:Y:6208670-C-T FGC69308 *
hg19:Y:13464466-G-C hg38:Y:11308790-G-C *
hg19:Y:13464475-G-A hg38:Y:11308799-G-A *
hg19:Y:24242331-C-CA hg38:Y:22096184-C-CA P3_b1 16×A*
hg19:Y:13349042-T-C hg38:Y:11193366-T-C *
hg19:Y:3451063-C-G hg38:Y:3583022-C-G *
hg19:Y:3076069-CTTTT-C,CTTT hg38:Y:3208028-CTTTT-C,CTTT 25×T*
hg38:Y:10662968-TC-T *
hg19:Y:13609583-G-T hg38:Y:11453907-G-T FT446450 *
hg38:Y:10889371-T-TCCTCC *
hg19:Y:15221083-AT-A,ATT hg38:Y:13109169-AT-A,ATT 18×T*
hg19:Y:13447918-T-G hg38:Y:11292242-T-G *
hg19:Y:5486876-CAAAAA-C hg38:Y:5618835-CAAAAA-C 21×A*
hg19:Y:2762705-CT-C,CTT hg38:Y:2894664-CT-C,CTT 16×T*
hg19:Y:28545016-CAA-C,CA hg38:Y:26398869-CAA-C,CA 22×A*
hg19:Y:7282159-CTTTT-C,CTTT hg38:Y:7414118-CTTTT-C,CTTT 22×T*
hg19:Y:58975519-T-G hg38:Y:56829372-T-G *
hg19:Y:18818389-GA-G,GAA hg38:Y:16706509-GA-G,GAA 17×A*
hg19:Y:22540536-G-A hg38:Y:20378650-G-A Y*
hg19:Y:15138012-CT-C,CTTT hg38:Y:13026099-CT-C,CTTT 15×T*
hg19:Y:3606672-GTT-G,GTTT hg38:Y:3738631-GTT-G,GTTT 19×T*
hg38:Y:56835435-C-A *
hg19:Y:5925524-T-C hg38:Y:6057483-T-C *
hg19:Y:4424377-GT-G,GTT hg38:Y:4556336-GT-G,GTT 18×T*
hg19:Y:28813077-A-T hg38:Y:26666930-A-T *
hg19:Y:9910485-G-T hg38:Y:10072876-G-T Y*
hg19:Y:3532154-T-C hg38:Y:3664113-T-C *
hg19:Y:28817647-AGGAATGGAAT-A,AGGAAT hg38:Y:26671500-AGGAATGGAAT-A,AGGAAT 9×GGAAT*
hg19:Y:5204641-CA-C,CAA hg38:Y:5336600-CA-C,CAA 22×A*
hg19:Y:21838971-G-GA,GAA hg38:Y:19677085-G-GA,GAA 20×A*
hg19:Y:20500942-GA-G,GAA hg38:Y:18339056-GA-G,GAA P5_Dst 15×A*
hg19:Y:22876964-T-TAAA hg38:Y:20715078-T-TAAA 20×A*
hg19:Y:5815594-CA-C,CAA hg38:Y:5947553-CA-C,CAA 22×A*
hg19:Y:18019832-CTTT-C,CT hg38:Y:15907952-CTTT-C,CT 22×T*
hg19:Y:13258558-CT-C,CTT hg38:Y:11102882-CT-C,CTT 20×T*
hg19:Y:2918624-T-C hg38:Y:3050583-T-C *
hg19:Y:15260684-CTT-C,CTTT hg38:Y:13148768-CTT-C,CTTT 25×T*
hg19:Y:20778689-TACAC-T hg38:Y:18616803-TACAC-T P4_Prx 13×AC*
hg19:Y:4973442-T-C hg38:Y:5105401-T-C *
hg19:Y:28747705-ATTT-A,AT hg38:Y:26601558-ATTT-A,AT 27×T*
hg19:Y:14286784-CTT-C,CTTT hg38:Y:12166078-CTT-C,CTTT 22×T*
hg19:Y:3403267-A-C hg38:Y:3535226-A-C *
hg19:Y:3271838-T-C hg38:Y:3403797-T-C *
hg38:Y:10632709-A-C,C *
hg38:Y:10632714-CA-C,C *
hg38:Y:10632717-G-C,C *
hg38:Y:10632738-ATTCCATCCATATCATTCCATTCCC-A,A *
hg38:Y:10632765-CAACTG-C,C *
hg38:Y:10632777-ACTCCTGTCCTCTTCT-A,A *
hg38:Y:10661491-TTTCAC-T *
hg38:Y:10661712-TC-T *
hg38:Y:10661735-AC-A *
hg38:Y:10661737-TTGACTTCAC-T *
hg38:Y:10663426-ACC-A *
hg38:Y:10663651-CAACT-C *
hg38:Y:10663657-CACTCCA-C *
hg38:Y:10663685-TC-T *
hg38:Y:10663688-ATTCC-A *
hg38:Y:10670971-CTTTCCACTCCATTCCATTCT-C *
hg38:Y:10763153-T-TTCCATTCCACTCCACTCCAC,TTCCATTCCACTCCACTCCAC *
hg19:Y:13448237-C-CT hg38:Y:11292561-C-CT *
hg19:Y:28787565-GAGGAGTGGAGTGGAATGGACTGGAGTGGAGTGGATTGGAGTGGAA-G hg38:Y:26641418-GAGGAGTGGAGTGGAATGGACTGGAGTGGAGTGGATTGGAGTGGAA-G *
hg38:Y:56827753-CCA-C *
hg38:Y:56827756-TTCCATTCCAGTCC-T *
hg38:Y:56834400-C-CCTGTCCACTCCATTCCACTCCACTTCACTCCAT *
hg38:Y:56834790-C-CATTCCACTCCACTCCATTCA *
hg38:Y:56835906-C-CTCCACTCCACTCAAT *
hg38:Y:56835940-A-ACTCCACTCAATTCCACTCCACTCAATTCCACTCCACTCAATTCCACTCCACTCTG *
hg38:Y:56858543-TAG-T *
hg38:Y:10676900-CCACTA-C *
hg38:Y:10884836-GC-G *
hg38:Y:10884838-TTTCCATTCC-T *
hg38:Y:10921961-T-TCC *
hg38:Y:56844846-T-A *
hg38:Y:10661296-T-TCCACTC *
hg38:Y:10693720-A-T *
hg19:Y:13451490-G-A,A hg38:Y:11295814-G-A,A *
hg19:Y:13472030-A-T hg38:Y:11316354-A-T *
hg38:Y:10661330-C-CCCATCCCATCCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATT *
hg38:Y:56871651-TGAG-T *
hg19:Y:13449513-A-ATT hg38:Y:11293837-A-ATT *
hg19:Y:13449514-C-CCAT,T hg38:Y:11293838-C-CCAT,T *
hg38:Y:56825934-T-TAATTCCATTCGATTG *
hg38:Y:56827971-TTCCAGTCCATTCCTTTCAAGTCCATTCAATTCCATTCCGTTCGAATTCATTCCATTCCATTCCATTTGATTCCATTCCATGCCATTCCATTCAATTCAATTCCATTCGATTCCATTCCATTCAAATCAATTCCATTCCAATCCATTCCATTCCATTCTATTCCATTCCATTCCAC-T *
hg38:Y:56833472-C-CAGTA *
hg38:Y:56833474-AT-A *
hg38:Y:56833476-AACC-A *
hg38:Y:10889250-TGCCA-T *
hg38:Y:10889255-TGCCATG-T *
hg19:Y:13464423-C-A hg38:Y:11308747-C-A *
hg19:Y:13609586-A-C hg38:Y:11453910-A-C FT446451 *
hg38:Y:56826847-G-GAGACTGTACT *
hg38:Y:56834817-C-CTCCACTCCAT *
hg19:Y:7258755-CAA-C,CA hg38:Y:7390714-CAA-C,CA 25×A*
hg19:Y:3271443-CCCT-C hg38:Y:3403402-CCCT-C *
hg19:Y:13450100-TCCACTCCACTCCACC-T hg38:Y:11294424-TCCACTCCACTCCACC-T *
hg19:Y:22436387-TTTACAGCAATTAAAGGTGTTATGTCCAGAGTTTGTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGGCTTGCTCACTTCAAGAATGAAGCTGCAGACCTTTACGGTGAGTG-T hg38:Y:20274501-TTTACAGCAATTAAAGGTGTTATGTCCAGAGTTTGTTCCTTCAGATGTGTCCAGAGTTTCTTCCTTCTGGCAGGTTCATGGGCTTGCTCACTTCAAGAATGAAGCTGCAGACCTTTACGGTGAGTG-T DYZ19 *
hg19:Y:3765760-CA-C hg38:Y:3897719-CA-C 12×A*
hg19:Y:13488533-C-G hg38:Y:11332857-C-G *
hg19:Y:13488576-TCC-T hg38:Y:11332900-TCC-T *
hg19:Y:13488580-A-AAG hg38:Y:11332904-A-AAG *
hg19:Y:13489564-C-G hg38:Y:11333888-C-G *
hg19:Y:4200055-C-CAAA hg38:Y:4332014-C-CAAA 23×A*
hg38:Y:10632802-ATTCCATTCCACTCCAT-A *
hg38:Y:10632823-ATTCCATTCCTTTTCTTCGACAGGATCTCGCTCTGTCACTCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACATTTCATTTCACCATTCC-A *
hg19:Y:16809372-TGATA-T,T hg38:Y:14697492-TGATA-T,T 11×GATA*
hg19:Y:13464434-T-C hg38:Y:11308758-T-C *
hg19:Y:7128621-CGTGTGT-C,CGTGT hg38:Y:7260580-CGTGTGT-C,CGTGT 23×GT*
hg19:Y:22048230-CA-C,C hg38:Y:19886344-CA-C,C 15×A*
hg38:Y:56835847-C-CCACTCCATTCCACT *
hg38:Y:10632799-TC-T *
hg19:Y:26480505-CA-C hg38:Y:24334358-CA-C P1_Y1 9×A*
hg19:Y:21552296-C-CTA hg38:Y:19390410-C-CTA *
hg19:Y:17187634-C-CAAA hg38:Y:15075754-C-CAAA 15×A*
hg19:Y:3643269-C-CTT hg38:Y:3775228-C-CTT 14×T*
hg38:Y:11294426-C- *
hg38:Y:11294441-CATCCCATCCCATTCT- *
hg19:Y:4327219-C-A hg38:Y:4459178-C-A *
hg19:Y:4327220-T-A hg38:Y:4459179-T-A *
hg19:Y:13349013-G-GTT hg38:Y:11193337-G-GTT *
hg19:Y:13349015-TAG-T hg38:Y:11193339-TAG-T *
hg19:Y:2888903-G-T hg38:Y:3020862-G-T YY*
hg19:Y:6929163-TAGGATAG-T hg38:Y:7061122-TAGGATAG-T *
hg19:Y:8568465-GTT-G,GTTT hg38:Y:8700424-GTT-G,GTTT 22×T*
hg19:Y:16244792-GGTGT-G,G hg38:Y:14132912-GGTGT-G,G 16×GT*
hg19:Y:13448341-A-ACTCCATTCCCCTCCG hg38:Y:11292665-A-ACTCCATTCCCCTCCG *
hg19:Y:6482918-G-GAA hg38:Y:6614877-G-GAA *
hg19:Y:6482920-T-TC hg38:Y:6614879-T-TC *
hg19:Y:6482922-A-AT hg38:Y:6614881-A-AT *
hg19:Y:6482924-A-T hg38:Y:6614883-A-T *
hg19:Y:6482925-CA-C hg38:Y:6614884-CA-C *
hg19:Y:6482928-AG-A hg38:Y:6614887-AG-A *
hg19:Y:6482930-ATT-A hg38:Y:6614889-ATT-A *
hg19:Y:3980500-G-T hg38:Y:4112459-G-T *
hg19:Y:17662010-ATG-A,A hg38:Y:15550130-ATG-A,A 21×TG*
hg38:Y:56834395-C-CTCCACTCCACTCCATTCCACTCCTATCCACTCCAT *
hg19:Y:18679925-CAAA-C,CAAAA hg38:Y:16568045-CAAA-C,CAAAA 25×A*
hg19:Y:13489686-CAT-C hg38:Y:11334010-CAT-C *
hg38:Y:56832539-C-A,CTCCAATCCATTCCAT *
hg38:Y:56834380-T-TTCCATTCCATTCCAC,TTCCGTTCAATTCCTC *
hg19:Y:3567571-C-T hg38:Y:3699530-C-T 10×CT*
hg19:Y:14331131-CTTT-C,CTTTT hg38:Y:12210425-CTTT-C,CTTTT 25×T*
hg19:Y:13489628-A-G hg38:Y:11333952-A-G *
hg19:Y:17662167-GTAGATAGATAGATAGA-G,GTAGA hg38:Y:15550287-GTAGATAGATAGATAGA-G,GTAGA 16×TAGA*
hg38:Y:7141147-T- *
hg19:Y:13448292-C-A hg38:Y:11292616-C-A *
hg19:Y:22143672-GT-G hg38:Y:19981786-GT-G *
hg19:Y:22143677-T-TA hg38:Y:19981791-T-TA *
hg19:Y:13489759-C-T hg38:Y:11334083-C-T *
hg19:Y:13267849-A-ACCTCT hg38:Y:11112173-A-ACCTCT *
hg19:Y:17951299-AT-A,ATT hg38:Y:15839419-AT-A,ATT 25×T*
hg19:Y:4675104-A-ATT hg38:Y:4807063-A-ATT 12×T*
hg19:Y:4487836-C-A hg38:Y:4619795-C-A *
hg19:Y:2685826-T-C hg38:Y:2817785-T-C YY*
hg19:Y:2753055-GTCTT-G hg38:Y:2885014-GTCTT-G *
hg19:Y:2753060-T-TAAAG hg38:Y:2885019-T-TAAAG *
hg19:Y:2795559-G-GTTTTTTTTTTT hg38:Y:2927518-G-GTTTTTTTTTTT 24×T*
hg19:Y:2982950-A-G hg38:Y:3114909-A-G *
hg19:Y:2982953-C-T hg38:Y:3114912-C-T *
hg19:Y:3563094-T-TA hg38:Y:3695053-T-TA 8×A*
hg19:Y:3804631-A-G hg38:Y:3936590-A-G *
hg19:Y:3963833-CA-C,CAA hg38:Y:4095792-CA-C,CAA 22×A*
hg19:Y:4019663-C-A hg38:Y:4151622-C-A *
hg19:Y:4058269-A-G hg38:Y:4190228-A-G *
hg19:Y:4188301-G-A hg38:Y:4320260-G-A *
hg19:Y:4470974-G-A hg38:Y:4602933-G-A *
hg19:Y:4547916-A-G hg38:Y:4679875-A-G *
hg19:Y:4734652-A-G hg38:Y:4866611-A-G *
hg19:Y:4773508-A-T hg38:Y:4905467-A-T *
hg19:Y:4880731-TGA-T hg38:Y:5012690-TGA-T *
hg19:Y:4880733-A-ATTT hg38:Y:5012692-A-ATTT *
hg19:Y:4880735-A-T hg38:Y:5012694-A-T *
hg19:Y:4973433-C-T hg38:Y:5105392-C-T *
hg19:Y:5028225-T-C hg38:Y:5160184-T-C *
hg19:Y:5544261-A-G hg38:Y:5676220-A-G *
hg19:Y:5554632-T-G hg38:Y:5686591-T-G *
hg19:Y:5554633-C-A hg38:Y:5686592-C-A *
hg19:Y:5554640-TGGCTCTTTGCTTG-T hg38:Y:5686599-TGGCTCTTTGCTTG-T *
hg19:Y:5554657-G-A hg38:Y:5686616-G-A *
hg19:Y:5780978-A-T hg38:Y:5912937-A-T *
hg19:Y:6043970-CTTT-C,CTT hg38:Y:6175929-CTTT-C,CTT 22×T*
hg19:Y:6134473-G-C hg38:Y:6266432-G-C *
hg19:Y:6688611-G-A hg38:Y:6820570-G-A YY*
hg19:Y:6688612-A-T hg38:Y:6820571-A-T YY*
hg19:Y:6688616-C-G hg38:Y:6820575-C-G YY*
hg19:Y:6688619-C-G hg38:Y:6820578-C-G YY*
hg19:Y:6688622-T-TTCCAGCTGC hg38:Y:6820581-T-TTCCAGCTGC *
hg19:Y:7410589-CAA-C hg38:Y:7542548-CAA-C 11×A*
hg19:Y:7970158-A-G hg38:Y:8102117-A-G YY*
hg19:Y:8052313-CCCGT-C hg38:Y:8184272-CCCGT-C *
hg19:Y:8052319-T-G hg38:Y:8184278-T-G Y*
hg19:Y:8052325-A-AACGG hg38:Y:8184284-A-AACGG *
hg19:Y:8218240-T-C hg38:Y:8350199-T-C YY*
hg19:Y:8807151-A-C hg38:Y:8939110-A-C Y*
hg19:Y:8888375-C-CT,CT hg38:Y:9020334-C-CT,CT 25×T*
hg19:Y:9063848-C-T hg38:Y:9226239-C-T Y*
hg19:Y:9329554-C-T hg38:Y:9491945-C-T Y*
hg19:Y:9427708-G-A hg38:Y:9590099-G-A YY*
hg19:Y:9900303-T-A hg38:Y:10062694-T-A Y*
hg38:Y:10662169-C-CTCCACTGCACGCCACTCCACTGCACTCCATTCCATTCCAT *
hg38:Y:10756962-T-TTCCATTCCATTCCATTCCATTCCATTCCATTCCACTGCAC,TTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCACTGCAC *
hg38:Y:10889266-GCCATT-G,TCCATT *
hg38:Y:10958318-CCATTCCAT-C,CTCCAT *
hg19:Y:13259198-G-T hg38:Y:11103522-G-T *
hg19:Y:13259201-A-C hg38:Y:11103525-A-C *
hg19:Y:13259207-GT-G hg38:Y:11103531-GT-G *
hg19:Y:13284832-GT-G hg38:Y:11129156-GT-G *
hg19:Y:13334639-G-GTCTCTCACT hg38:Y:11178963-G-GTCTCTCACT *
hg19:Y:13334644-A-T hg38:Y:11178968-A-T *
hg19:Y:13339027-T-C hg38:Y:11183351-T-C *
hg19:Y:13380486-T-C hg38:Y:11224810-T-C *
hg38:Y:11294723-A- *
hg19:Y:13462207-T-G hg38:Y:11306531-T-G *
hg19:Y:13474112-T-C hg38:Y:11318436-T-C *
hg19:Y:13485311-T-G hg38:Y:11329635-T-G *
hg19:Y:13488844-G-GAC hg38:Y:11333168-G-GAC *
hg19:Y:13489217-C-G hg38:Y:11333541-C-G *
hg19:Y:13499806-T-TA hg38:Y:11344130-T-TA *
hg19:Y:13499807-T-A hg38:Y:11344131-T-A 11×A*
hg19:Y:13541007-A-G hg38:Y:11385331-A-G *
hg19:Y:13612009-C-G hg38:Y:11456333-C-G *
hg19:Y:13612013-C-A hg38:Y:11456337-C-A *
hg19:Y:13612016-C-A hg38:Y:11456340-C-A *
hg19:Y:13687627-A-C,T hg38:Y:11531951-A-C,T DYZ17 *
hg19:Y:13919054-CA-C hg38:Y:11798348-CA-C *
hg19:Y:14392746-T-C hg38:Y:12272042-T-C YY*
hg19:Y:14617921-T-C hg38:Y:12506119-T-C Y*
hg19:Y:14635670-G-A hg38:Y:12523739-G-A YY*
hg19:Y:14744883-C-A hg38:Y:12632952-C-A YY*
hg19:Y:14744891-G-A hg38:Y:12632960-G-A YY*
hg19:Y:14787715-T-C hg38:Y:12675785-T-C YY*
hg19:Y:15491848-A-T hg38:Y:13379968-A-T YY*
hg19:Y:15545639-G-A hg38:Y:13433759-G-A YY*
hg19:Y:16031457-G-A hg38:Y:13919577-G-A Y*
hg19:Y:16336894-A-AT hg38:Y:14225014-A-AT *
hg19:Y:16535053-CT-C,CTTT hg38:Y:14423173-CT-C,CTTT 35×T*
hg19:Y:16710825-T-C hg38:Y:14598945-T-C YY*
hg19:Y:16868605-A-G hg38:Y:14756725-A-G YY*
hg19:Y:16940438-A-T hg38:Y:14828558-A-T YY*
hg19:Y:16940446-GTT-G hg38:Y:14828566-GTT-G *
hg19:Y:16940450-C-A hg38:Y:14828570-C-A YY*
hg19:Y:17031018-T-C hg38:Y:14919138-T-C YY*
hg19:Y:17299921-CATAG-C,C hg38:Y:15188041-CATAG-C,C 12×ATAG*
hg19:Y:17317729-C-CACACAG hg38:Y:15205849-C-CACACAG *
hg19:Y:17361058-C-CAAAAAAA hg38:Y:15249178-C-CAAAAAAA 25×A*
hg19:Y:17446767-C-CTT,CTT hg38:Y:15334887-C-CTT,CTT 33×T*
hg19:Y:17641957-CT-C,CTTT hg38:Y:15530077-CT-C,CTTT 25×T*
hg19:Y:17648536-ATT-A,ATTT hg38:Y:15536656-ATT-A,ATTT 22×T*
hg19:Y:17678624-T-C hg38:Y:15566744-T-C YY*
hg19:Y:18109358-T-TAAA hg38:Y:15997478-T-TAAA 23×A*
hg19:Y:18196560-T-C hg38:Y:16084680-T-C YY*
hg19:Y:18201958-T-C hg38:Y:16090078-T-C YY*
hg19:Y:18279920-G-T hg38:Y:16168040-G-T P6_Prx *
hg19:Y:18581904-CAA-C hg38:Y:16470024-CAA-C 10×A*
hg19:Y:18688500-C-A,CA hg38:Y:16576620-C-A,CA 20×A*
hg19:Y:18712435-A-G hg38:Y:16600555-A-G YY*
hg19:Y:18756804-T-C hg38:Y:16644924-T-C YY*
hg19:Y:18858611-GAA-G,GA hg38:Y:16746731-GAA-G,GA 14×A*
hg19:Y:18980438-A-G hg38:Y:16868558-A-G YY*
hg19:Y:18984952-T-A hg38:Y:16873072-T-A YY*
hg19:Y:19007764-T-C hg38:Y:16895884-T-C YY*
hg19:Y:19032285-A-ACT hg38:Y:16920405-A-ACT *
hg19:Y:19032288-TGA-T hg38:Y:16920408-TGA-T *
hg19:Y:19155412-T-C hg38:Y:17043532-T-C Y*
hg19:Y:19318178-CTTTTTTTTTT-C hg38:Y:17206298-CTTTTTTTTTT-C 28×T*
hg19:Y:19537935-A-G hg38:Y:17426055-A-G YY*
hg19:Y:19663297-G-A hg38:Y:17551417-G-A P5_Prx *
hg19:Y:21128259-T-TA,TAA hg38:Y:18966373-T-TA,TAA 18×A*
hg19:Y:21261826-TAA-T,TAAA hg38:Y:19099940-TAA-T,TAAA 26×A*
hg19:Y:21464536-CAAA-C,CAAAA hg38:Y:19302650-CAAA-C,CAAAA 19×A*
hg19:Y:21581965-T-A hg38:Y:19420079-T-A Y*
hg19:Y:21966358-C-T hg38:Y:19804472-C-T Y*
hg19:Y:22012364-A-G hg38:Y:19850478-A-G Y*
hg19:Y:22202902-A-G hg38:Y:20041016-A-G YY*
hg19:Y:22230288-G-T hg38:Y:20068402-G-T DYZ19 *
hg19:Y:22270397-A-G hg38:Y:20108511-A-G DYZ19 *
hg19:Y:22480137-C-A hg38:Y:20318251-C-A DYZ19 *
hg19:Y:22537973-T-C hg38:Y:20376087-T-C Y*
hg19:Y:22723405-A-C hg38:Y:20561519-A-C YY*
hg19:Y:22768350-A-T hg38:Y:20606464-A-T YY*
hg19:Y:22855851-T-C hg38:Y:20693965-T-C Y*
hg19:Y:22868285-TAAA-T,TAA hg38:Y:20706399-TAAA-T,TAA 27×A*
hg19:Y:22949878-CT-C,C hg38:Y:20787992-CT-C,C 23×T*
hg38:Y:20787993-T- *
hg19:Y:23350626-CTT-C,CTTTT hg38:Y:21188740-CTT-C,CTTTT 21×T*
hg19:Y:23380568-G-GA hg38:Y:21218682-G-GA *
hg19:Y:23505495-CAA-C,CAAAAA hg38:Y:21343609-CAA-C,CAAAAA 23×A*
hg38:Y:21753786-G-A *
hg19:Y:24390506-C-CAA hg38:Y:22244359-C-CAA 11×A*
hg19:Y:25551807-T-C hg38:Y:23405660-T-C P1_gr1 *
hg19:Y:25737135-C-A hg38:Y:23590988-C-A P1_b3 *
hg19:Y:28474298-AC-A hg38:Y:26328151-AC-A *
hg19:Y:28474319-C-T hg38:Y:26328172-C-T *
hg19:Y:28474326-C-A hg38:Y:26328179-C-A *
hg19:Y:28534865-A-G hg38:Y:26388718-A-G *
hg19:Y:28539174-CAAAA-C,CAAA hg38:Y:26393027-CAAAA-C,CAAA 20×A*
hg19:Y:28564147-T-G hg38:Y:26418000-T-G *
hg38:Y:56826392-CCATTCCATTG-C *
hg38:Y:56829170-A-T *
hg38:Y:56829185-A-T *
hg38:Y:56834433-CA-C *
hg38:Y:56835863-C-CCACTCCACTCCA *
hg38:Y:56848702-CTTTGTGACATATCTCTGCACTGATCACCTAGGTGATGTAACAGTTTTATAAGCTCTGCCTACAGGGA-C *
hg38:Y:56848777-C- *
hg38:Y:56848779-A- *
hg38:Y:56851596-C-G *

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: GJ35XEKY1509403093304418303785
Used in age calculations1509403093304418303785
Counts of SNPs5840
Variant counts last updated 2025-11-16 03:12:28.


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