Coucke

YDW-Kane-BY3: Y93JVQ31
MDKA Birth: Belgium > Flanders 1335

Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > Z49 > Y107974 > BY39347

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRYDW-Kane-BY3
Y93JVQ31
23801733-C-CA 21639847-C-CA 31×A+
18861458-T-G 16749578-T-G L1335/S530M10953 S738 AM01356 Y+
14195979-CA-C 12075273-CA-C 28×A+
23832828-T-C 21670942-T-C Y+
7359791-A-AAT 7491750-A-AAT 12×AT+
7827361-C-T 7959320-C-T Z25119 YY+
28802569-T-C 26656422-T-C +
19126436-C-CAAAAAAAAAAA 17014556-C-CAAAAAAAAAAA 25×A+
7028584-CG-C 7160543-CG-C +
2719179-C-T 2851138-C-T BY53478 YY+
5088751-C-CT 5220710-C-CT 23×T+
4413178-G-T 4545137-G-T FTB50162 +
21958406-C-G 19796520-C-G Y+
28802561-ATGGGG-A 26656414-ATGGGG-A +
13923530-CA-C 11802824-CA-C 29×A+
10954292-A-AC +
10954293-T-TGCAC +
10954304-T-A +
22802868-A-ATTTTTTTTTTTTTTTTTTTTTTTTTTTT 20640982-A-ATTTTTTTTTTTTTTTTTTTTTTTTTTTT 32×T+
2828114-G-C 2960073-G-C FTB39521 YY+
3508786-AT-A 3640745-AT-A +
3591096-G-C 3723055-G-C FTB49980 +
3636440-T-A 3768399-T-A FT197643 +
3704149-C-T 3836108-C-T FTB50010 +
4124126-T-A 4256085-T-A FTB50104 +
4153790-C-T 4285749-C-T FTB50111 +
5134988-G-T 5266947-G-T FTB50323 +
5836091-T-C 5968050-T-C FTB50479 +
5937148-G-T 6069107-G-T FTB50504 +
6143595-A-G 6275554-A-G FTB50561 IR3_Dst +
6215836-T-C 6347795-T-C IR3_Dst +
6908734-G-A 7040693-G-A YY+
6985859-G-A 7117818-G-A FTB39571 YY+
7733669-C-T 7865628-C-T FTB39665 YY+
8495083-G-T 8627042-G-T FTB39764 YY+
8852437-A-T 8984396-A-T FTB39811 YY+
8999538-C-T 9161929-C-T FTB39822 Y+
9940552-CA-C 10102943-CA-C +
10021504-ATCTC-A 10183895-ATCTC-A +
10065429-T-C 10227820-T-C +
10803064-T-A +
10813303-A-C +
10834575-C-T +
10840708-A-C +
10974816-G-GCCACT +
13293035-T-C 11137359-T-C +
13504670-G-A 11348994-G-A +
11669440-G-A DYZ17 +
13911439-A-C 11790733-A-C FTB39871 Y+
14237125-C-A 12116419-C-A FTB39924 YY+
14326133-G-A 12205427-G-A FTB39943 YY+
14493204-AT-A 12381401-AT-A +
15240280-A-G 13128366-A-G FTB40062 Y+
15315924-A-G 13204030-A-G FTB40074 YY+
15946512-C-G 13834632-C-G FTB40158 YY+
16831805-T-C 14719925-T-C FTB40260 YY+
17146981-T-G 15035101-T-G FTB40294 YY+
17184625-C-A 15072745-C-A FTB40300 YY+
17490660-A-G 15378780-A-G FTB40341 YY+
17601254-A-AT 15489374-A-AT +
18520180-A-C 16408300-A-C P6_Dst +
18578828-G-A 16466948-G-A FTB40477 YY+
18646996-T-C 16535116-T-C FTB40491 YY+
18705082-G-T 16593202-G-T YY+
18958591-G-A 16846711-G-A FTB40536 YY+
19186125-T-C 17074245-T-C FTB40581 Y+
19492290-C-CAAAAAAAAAA 17380410-C-CAAAAAAAAAA 37×A+
20065326-G-A 17953446-G-A BY212091 P5_Gap +
20377978-C-T 18216092-C-T P5_Dst +
20836942-C-T 18675056-C-T FTB40653 P4_Gap +
21032158-T-A 18870272-T-A Y+
21248664-C-T 19086778-C-T FTB40676 YY+
21304208-G-T 19142322-G-T YY+
21306405-A-G 19144519-A-G FTB40690 YY+
21357412-C-G 19195526-C-G FTB40700 YY+
21569958-T-TAAAAAAAAAA 19408072-T-TAAAAAAAAAA 46×A+
21958405-C-G 19796519-C-G Y+
22267084-T-A 20105198-T-A DYZ19 +
22270749-G-T 20108863-G-T DYZ19 +
22470986-G-T 20309100-G-T DYZ19 +
22909637-A-C 20747751-A-C FTB40858 YY+
23053586-G-T 20891700-G-T FTB40876 YY+
28025141-C-A 25878994-C-A P1_Y2 +
28674226-A-G 26528079-A-G +
56876124-C-CAAAAAAAAAA 50×A+
6985100-GGT-G 7117059-GGT-G 10×GT*
6633960-C-CT 6765919-C-CT 10×T*
2888870-C-CAA 3020829-C-CAA 32×A*
17678621-C-CT 15566741-C-CT 26×T*
6961474-AAT-A 7093433-AAT-A *
2802718-C-CA 2934677-C-CA 11×A*
15810962-GGTGTGT-G 13699082-GGTGTGT-G 19×GT*
58981059-G-T 56834912-G-T *
5492439-C-CTTT 5624398-C-CTTT 18×T*
5434020-GT-G 5565979-GT-G 13×T*
15145336-TAA-T 13033423-TAA-T 15×A*
17632712-G-GTA 15520832-G-GTA 8×TA*
10034732-A-C 10197123-A-C Y*
2776495-AT-A 2908454-AT-A 10×T*
5728934-TAG-T 5860893-TAG-T *
24460381-AT-A 22314234-AT-A 10×T*
4319180-CTAGGTAAT-C 4451139-CTAGGTAAT-C *
14784872-A-ATT 12672942-A-ATT 18×T*
7611672-C-T 7743631-C-T BY53675 YY*
14834316-C-T 12722383-C-T BY97875 YY*
21556919-C-CTTTTTTTTTTTTTT 19395033-C-CTTTTTTTTTTTTTT 23×T*
21099740-C-CTT 18937854-C-CTT 16×T*
2945498-T-G 3077457-T-G FT315510 *
2988358-G-T 3120317-G-T *
3066664-G-A 3198623-G-A *
3072578-T-C 3204537-T-C *
4314242-T-C 4446201-T-C *
4317897-T-C 4449856-T-C *
4318635-A-C 4450594-A-C *
5241759-TTA-T 5373718-TTA-T FT208209 *
5357484-G-C 5489443-G-C *
5357501-T-A 5489460-T-A *
5554128-A-G 5686087-A-G *
5567109-G-A 5699068-G-A *
5664579-C-T 5796538-C-T *
5670699-G-A 5802658-G-A *
5674990-C-A 5806949-C-A *
5786608-C-CAA 5918567-C-CAA 20×A*
6597965-A-G 6729924-A-G *
7029415-ATC-A 7161374-ATC-A 8×TC*
13257289-ATTT-A 11101613-ATTT-A 18×T*
13921539-G-C 11800833-G-C YY*
13921545-T-C 11800839-T-C YY*
14319551-ATG-A 12198845-ATG-A *
16057763-CCA-C 13945883-CCA-C *
16635280-AAT-A 14523400-AAT-A *
22459305-T-A 20297419-T-A FGC69465 BY28419 DYZ19 *
28633965-T-TA 26487818-T-TA 10×A*
17872639-CTTTT-C 15760759-CTTTT-C 17×T*
2740258-GAC-G 2872217-GAC-G *
2785819-TTTA-T 2917778-TTTA-T 6×TTA*
3051063-A-G 3183022-A-G *
3791645-ATC-A 3923604-ATC-A 8×TC*
4319482-G-T 4451441-G-T *
4334212-TTA-T 4466171-TTA-T *
4499916-T-C 4631875-T-C *
5235822-CCA-C 5367781-CCA-C *
5667760-G-C 5799719-G-C *
5826571-C-G 5958530-C-G Z8666 *
8537640-TTG-T 8669599-TTG-T *
10034738-A-C 10197129-A-C Y*
13451337-CT-C 11295661-CT-C *
14415784-TAC-T 12295081-TAC-T *
16612125-GTC-G 14500245-GTC-G 8×TC*
16957776-C-T 14845896-C-T FT180871 YY*
18668108-TTC-T 16556228-TTC-T *
19257108-AAT-A 17145228-AAT-A 8×AT*
21369511-AAC-A 19207625-AAC-A *
21710391-CCT-C 19548505-CCT-C *
23070801-TGTA-T 20908915-TGTA-T *
23234083-TTA-T 21072197-TTA-T *
23966948-AGT-A 21820801-AGT-A *
28657166-TAC-T 26511019-TAC-T *
58973847-T-C 56827700-T-C *
58978526-C-G 56832379-C-G *
58980320-C-T 56834173-C-T *
58982983-C-A 56836836-C-A *
58997811-A-G 56851664-A-G *
59005514-T-C 56859367-T-C *
59005534-G-A 56859387-G-A *
59007163-C-T 56861016-C-T *
59020414-T-G 56874267-T-G *
7535818-C-T 7667777-C-T FGC21125BY22511 YY*
15842557-C-CTTTCT 13730677-C-CTTTCT 13×T*
15869054-GT-G 13757174-GT-G Y31393 11×T*
24536774-TA-T 22390627-TA-T P3_t2 12×A*
5753522-CT-C 5885481-CT-C 10×T*
19646268-AT-A 17534388-AT-A P5_Prx 9×T*
10004868-C-CGT 10167259-C-CGT 8×GT*
6313885-CA-C 6445844-CA-C IR3_Dst 9×A*
23070809-A-T 20908923-A-T YY*
14636150-ATTTG-A 12524219-ATTTG-A 7×TTTG*
9035388-CT-C 9197779-CT-C 10×T*
14063145-CAGATAGAT-C,CAGAT 11942439-CAGATAGAT-C,CAGAT 13×AGAT*
15658259-T-TAC 13546379-T-TAC 11×AC*
9880201-GT-G 10042592-GT-G BY11427 10×T*
9747134-T-G 9909525-T-G *
19720787-C-T 17608907-C-T P5_Prx *
16631750-CTT-C 14519870-CTT-C 14×T*
13478412-C-T 11322736-C-T *
4348378-A-AAT 4480337-A-AAT 8×AT*
2845821-CAA-C 2977780-CAA-C 28×A*
7137216-C-T 7269175-C-T BY42696 YY*
20943477-CTG-C 18781591-CTG-C P4_Dst 12×TG*
13450102-CACTCCACTCCACCCCATCCCATCCCATTCT-C 11294426-CACTCCACTCCACCCCATCCCATCCCATTCT-C *
18395599-CA-C,CAA 16283719-CA-C,CAA P6_Gap 15×A*
19043480-G-GA 16931600-G-GA 10×A*
4654305-AT-A 4786264-AT-A 9×T*
7100954-C-CTT 7232913-C-CTT 32×T*
13888692-TTG-T 11767986-TTG-T 9×TG*
7296040-CA-C 7427999-CA-C 9×A*
56832700-A-ACTGCACTCCT *
8342842-T-TA 8474801-T-TA 10×A*
23825773-A-ATAT 21663887-A-ATAT 11×AT*
22710641-TA-T 20548755-TA-T 10×A*
7669344-AT-A 7801303-AT-A 10×T*
21104964-A-AT 18943078-A-AT 11×T*
7280952-CT-C,CTT 7412911-CT-C,CTT 26×T*
6652472-TA-T 6784431-TA-T 9×A*
2909234-CA-C,CAA 3041193-CA-C,CAA 16×A*
19202928-CAA-C 17091048-CAA-C 25×A*
13875625-G-GT 11754919-G-GT 8×T*
18039366-ATTTTTTT-A 15927486-ATTTTTTT-A 30×T*
14031666-C-CT 11910960-C-CT 10×T*
12842478-CTT-C 14×T*
14020334-T-TA 11899628-T-TA 10×A*
13257554-C-A 11101878-C-A *
18718886-ATATCTATC-A,ATATC 16607006-ATATCTATC-A,ATATC 13×TATC*
17058608-CT-C 14946728-CT-C 9×T*
6867675-C-A 6999634-C-A YY*
14224229-GAA-G 12103523-GAA-G 13×A*
18263856-CAAAA-C 16151976-CAAAA-C 26×A*
4577093-CA-C 4709052-CA-C 13×A*
19401599-TAA-T 17289719-TAA-T 11×A*
18195331-AT-A 16083451-AT-A 8×T*
16730003-GA-G,GAA 14618123-GA-G,GAA 17×A*
28605225-G-GA 26459078-G-GA 10×A*
56830214-A-ACTCCACTCCT *
56851623-T-C *
10663885-A-T *
11027510-A-C FT440091 *
16063491-AT-A 13951611-AT-A 9×T*
6699055-G-T 6831014-G-T YY*
22722112-G-GA 20560226-G-GA 10×A*
56832819-C-T *
18908082-ATGTG-A 16796202-ATGTG-A 14×TG*
13448259-C-G 11292583-C-G *
17143891-A-AT 15032011-A-AT 35×T*
2833359-A-AT 2965318-A-AT 9×T*
19272142-CAAAAA-C 17160262-CAAAAA-C 18×A*
2718881-C-CTT 2850840-C-CTT 21×T*
10859334-T-A *
6531755-AT-A 6663714-AT-A 10×T*
6446724-TA-T 6578683-TA-T 10×A*
14451762-CT-C 12331035-CT-C 8×T*
3705144-G-GA 3837103-G-GA 10×A*
16382748-T-TA 14270868-T-TA 10×A*
14910797-AATT-A 12798864-AATT-A *
15002050-ATT-A 12890135-ATT-A 14×T*
11027513-A-T *
8403272-C-CAA 8535231-C-CAA 28×A*
56836401-C-A *
56837734-A-T *
13253396-G-GT,GTTT 11097720-G-GT,GTTT 12×T*
17834346-T-C 15722466-T-C YY*
3561545-C-A 3693504-C-A *
21177211-G-GTTT 19015325-G-GTTT 19×T*
10950913-C-T *
23435181-GTTT-G 21273295-GTTT-G 20×T*
5300642-CT-C 5432601-CT-C 10×T*
7210235-CA-C 7342194-CA-C 10×A*
3790830-ATG-A 3922789-ATG-A *
5181028-A-AT 5312987-A-AT 10×T*
2740721-A-AT 2872680-A-AT 10×T*
3232253-TAA-T 3364212-TAA-T 13×A*
14352579-CTT-C 12231874-CTT-C 14×T*
8333626-ACTTCTT-A,ACTT 8465585-ACTTCTT-A,ACTT 25×CTT*
8468092-C-A 8600051-C-A YY*
17094913-AT-A 14983033-AT-A 10×T*
5314565-GGT-G 5446524-GGT-G *
56878253-GCA-G 9×CA*
21919566-AT-A 19757680-AT-A 10×T*
3638582-AT-A 3770541-AT-A 11×T*
3953027-G-GA 4084986-G-GA 10×A*
7105159-A-C 7237118-A-C YY*
10663896-C-A *
10999079-T-C *
23789324-G-GTT 21627438-G-GTT 13×T*
3970906-CT-C 4102865-CT-C 11×T*
10850820-C-T *
18343602-C-CTT 16231722-C-CTT P6_Prx 25×T*
56851046-C-T *
56881325-TA-T 11×A*
4973668-CAAAA-C 5105627-CAAAA-C 19×A*
17192970-TACACAC-T 15081090-TACACAC-T 14×AC*
4390006-G-GA 4521965-G-GA 10×A*
4505414-ATTT-A 4637373-ATTT-A 22×T*
7567753-CTT-C,CTTT 7699712-CTT-C,CTTT 25×T*
3838601-C-CT 3970560-C-CT 31×T*
4370436-A-G 4502395-A-G FGC76630 *
5664336-C-T 5796295-C-T *
5664338-A-G 5796297-A-G *
58990783-A-C 56844636-A-C *
16063171-GTTTCTTTC-G,GTTTC 13951291-GTTTCTTTC-G,GTTTC 14×TTTC*
13256046-T-G 11100370-T-G *
14798163-CT-C 12686234-CT-C 9×T*
5569385-G-GAA 5701344-G-GAA 10×A*
16629393-C-CT 14517513-C-CT 9×T*
13214292-T-C 11058616-T-C *
3769969-T-TA 3901928-T-TA 12×A*
19226188-AATAGATAGATAG-A,AATAG 17114308-AATAGATAGATAG-A,AATAG 14×ATAG*
5433983-GTATA-G 5565942-GTATA-G 10×TA*
10859335-C-T FT89969 *
23593388-GA-G 21431502-GA-G 10×A*
14900644-AT-A,ATT 12788711-AT-A,ATT 27×T*
5664525-G-A 5796484-G-A *
3193186-A-AT 3325145-A-AT 10×T*
56871623-T-TAAA 9×A*
14776957-G-A 12665026-G-A YY*
4742850-GT-G 4874809-GT-G 10×T*
3286982-A-G 3418941-A-G *
10034735-A-C 10197126-A-C Y*
4304887-A-G 4436846-A-G FGC81654 *
18518268-G-GTTT 16406388-G-GTTT P6_Dst 24×T*
20104245-G-GAAA 17992365-G-GAAA P5_Dst *
15028566-AT-A 12916654-AT-A 9×T*
2805529-CA-C,CAA 2937488-CA-C,CAA 22×A*
18863060-AT-A 16751180-AT-A 10×T*
56830205-T-TTCCACTCCAC,TTCCACTCCACTCCAC *
14678904-C-CT 12566970-C-CT 10×T*
56833291-C-A *
6013639-A-AT 6145598-A-AT 11×T*
16340147-GA-G,GAA 14228267-GA-G,GAA 22×A*
12377235-T-TA *
10968099-GCACTC-G *
14795076-C-A 12683147-C-A Y*
13254615-C-A 11098939-C-A *
17446767-CTTT-C 15334887-CTTT-C 33×T*
2955378-C-CAT 3087337-C-CAT 9×AT*
16641188-TAA-T 14529308-TAA-T 11×A*
6586786-CTTT-C 6718745-CTTT-C 22×T*
13489698-TGC-T 11334022-TGC-T *
7019347-A-ATTT 7151306-A-ATTT 13×T*
28801365-GTGGAA-G 26655218-GTGGAA-G *
7543900-A-AAT 7675859-A-AAT *
18109358-TAAAAA-T,TAAAA 15997478-TAAAAA-T,TAAAA 23×A*
4336695-ATTT-A 4468654-ATTT-A 30×T*
21085779-C-CA 18923893-C-CA 24×A*
28708179-GT-G 26562032-GT-G 9×T*
3567571-CCTCT-C 3699530-CCTCT-C 10×CT*
13489745-T-A 11334069-T-A *
5204641-CAA-C,CA 5336600-CAA-C,CA 22×A*
17047880-A-ATT 14936000-A-ATT 16×T*
56822169-T-G *
3463405-A-C 3595364-A-C *
13450817-G-T 11295141-G-T *
19309460-T-TAC 17197580-T-TAC 11×AC*
19121920-CT-C,CTT 17010040-CT-C,CTT 17×T*
4890502-T-TA 5022461-T-TA 9×A*
25566323-A-AT 23420176-A-AT P1_gr1 9×T*
4000403-ATT-A 4132362-ATT-A 14×T*
18760242-TTCTCTC-T,TTC 16648362-TTCTCTC-T,TTC 27×TC*
4871454-TA-T 5003413-TA-T 10×A*
56831725-C-G *
7418073-CA-C,CAA 7550032-CA-C,CAA 22×A*
56836402-C-T *
18390083-CA-C,CAA 16278203-CA-C,CAA P6_Gap 19×A*
13489717-C-G 11334041-C-G *
13489776-C-A 11334100-C-A *
18328776-C-A 16216896-C-A P6_Prx *
22540538-G-GTATATA 20378652-G-GTATATA 17×TA*
2824694-A-C 2956653-A-C YY*
21391650-CTT-C,CT 19229764-CTT-C,CT 14×T*
15733879-CAAA-C,CA 13621999-CAAA-C,CA 25×A*
4636109-AT-A 4768068-AT-A *
27937836-G-T 25791689-G-T P1_Y2 17×A*
9747141-A-T 9909532-A-T *
15138012-CT-C,CTT 13026099-CT-C,CTT 15×T*
5523917-C-CT 5655876-C-CT 24×T*
3061772-C-T 3193731-C-T *
28747705-ATT-A,AT 26601558-ATT-A,AT 27×T*
14795080-CT-C,CTT 12683151-CT-C,CTT 24×T*
15208845-CAA-C,CA 13096931-CAA-C,CA 23×A*
6997225-A-T 7129184-A-T YY11×T*
13448280-C-CATTTA 11292604-C-CATTTA *
4948759-G-GT 5080718-G-GT 9×T*
4251033-CTTTT-C,CTTT 4382992-CTTTT-C,CTTT 24×T*
4429318-G-T 4561277-G-T 15×A*
4370462-TA-T 4502421-TA-T *
6694444-CTT-C,CTTT 6826403-CTT-C,CTTT 20×T*
16905870-CAAA-C,CAA 14793990-CAAA-C,CAA 25×A*
18857159-T-G 16745279-T-G YY*
3266012-C-CT 3397971-C-CT 9×T*
4793991-ATT-A 4925950-ATT-A 13×T*
15321328-GTT-G,GT 13209446-GTT-G,GT 25×T*
14743154-CA-C,CAA 12631222-CA-C,CAA 19×A*
5007689-CA-C,CAA 5139648-CA-C,CAA 22×A*
6685034-A-G 6816993-A-G Y*
20500942-G-GAA 18339056-G-GAA P5_Dst 15×A*
2860022-C-CTT 2991981-C-CTT 14×T*
5814488-GAAA-G 5946447-GAAA-G 18×A*
16904731-AGTGT-A,AGT 14792851-AGTGT-A,AGT 20×GT*
26500451-AACACACAC-A,AAC 24354304-AACACACAC-A,AAC P1_Y1 23×AC*
6091720-ATTT-A,ATT 6223679-ATTT-A,ATT 28×T*
6402272-TTCGTACGTGCCGTAAAATACCGACGTATATGTTATATTCTTCCGTGTCGTAAAATACCGACGTATTTGTTATAA-T 6534231-TTCGTACGTGCCGTAAAATACCGACGTATATGTTATATTCTTCCGTGTCGTAAAATACCGACGTATTTGTTATAA-T *
6402245-TCGTAAAATACCAATGTATATGTTATATTCGTACGTGC-T 6534204-TCGTAAAATACCAATGTATATGTTATATTCGTACGTGC-T *
56834907-T-C *
14465787-GT-G 12345060-GT-G 10×T*
4650032-TA-T 4781991-TA-T 10×A*
5090542-C-CT 5222501-C-CT 10×T*
22746246-AT-A 20584360-AT-A 10×T*
13450834-T-TCCCCTCCTCTCCATC 11295158-T-TCCCCTCCTCTCCATC *
26320658-TAA-T 24174511-TAA-T P1_Y1 14×A*
56834380-T-TTCCATTCCATTCCAC,TTCCGTTCCATTCCAC *
13712838-A-G 11557162-A-G DYZ17 *
28794515-G-T 26648368-G-T *
16531108-G-T 14419228-G-T YY*
13489696-C-CAG 11334020-C-CAG *
4564938-TA-T 4696897-TA-T 10×A*
13448032-ACTCC-A 11292356-ACTCC-A *
4319761-C-G 4451720-C-G *
8113001-CA-C 8244960-CA-C 9×A*
15698757-GACACAC-G,GACAC 13586877-GACACAC-G,GACAC 24×AC*
4503310-GTATTAT-G,G 4635269-GTATTAT-G,G 16×TAT*
10933362-GTCCAC-G *
20105742-T-TTATCTATC,TTATCTATC 17993862-T-TTATCTATC,TTATCTATC P5_Dst 14×TATC*
5733183-AT-A 5865142-AT-A 10×T*
56830816-ACTCC- *
17099687-A-C 14987807-A-C YY*
3359049-C-T 3491008-C-T *
56871631-A-AAAAAAAAATATAT 10×AT*
13448039-C-A 11292363-C-A *
3471328-C-CT 3603287-C-CT 8×T*
8563915-G-GA 8695874-G-GA 9×A*
5869966-G-GTTTT 6001925-G-GTTTT 15×T*
16783412-TAA-T,TA 14671532-TAA-T,TA 13×A*
5453891-CT-C,CTT 5585850-CT-C,CTT 19×T*
4976787-CA-C,CAA 5108746-CA-C,CAA 21×A*
12631481-CT-C,C 13×T*
13447551-CTCCGT-C 11291875-CTCCGT-C *
2865740-CATA-C 2997699-CATA-C *
3039839-CTTTTTT-C,CTTTTTTT 3171798-CTTTTTT-C,CTTTTTTT 22×T*
3061870-C-T 3193829-C-T *
3061879-A-G 3193838-A-G *
3072590-AG-A 3204549-AG-A *
3548670-ATT-A,ATTT 3680629-ATT-A,ATTT 17×T*
3709199-GTTTTTT-G 3841158-GTTTTTT-G 17×T*
3804732-CAAAA-C,CAAA 3936691-CAAAA-C,CAAA 29×A*
4005957-ATT-A,AT 4137916-ATT-A,AT 12×T*
4019555-G-A 4151514-G-A *
4020761-T-TAA 4152720-T-TAA 12×A*
4100962-G-T 4232921-G-T *
4146871-G-A 4278830-G-A *
4286447-T-C 4418406-T-C *
4311949-G-A 4443908-G-A *
4320817-G-C 4452776-G-C *
4446436-T-G 4578395-T-G *
4498179-AT-A,ATTT 4630138-AT-A,ATTT 23×T*
4602316-T-A 4734275-T-A *
4981758-T-TAA 5113717-T-TAA 11×A*
5366724-T- *
5585851-T- *
5468198-T-TG 5600157-T-TG *
5491261-CAAAA-C 5623220-CAAAA-C 18×A*
5569817-C-T 5701776-C-T *
5927820-T- *
5797434-GATAT-G,GAT 5929393-GATAT-G,GAT 21×AT*
5818143-CAGATAGAT-C,CAGAT 5950102-CAGATAGAT-C,CAGAT 11×AGAT*
6020711-T-TA 6152670-T-TA *
6040789-CA-C,CAAAA 6172748-CA-C,CAAAA 22×A*
6443469-CA-C,C 6575428-CA-C,C 11×A*
6749226-A-G 6881185-A-G Y*
6776497-CAA-C,CA 6908456-CAA-C,CA 28×A*
7142113-C-T 7274072-C-T Y*
7535790-T-A 7667749-T-A YY*
7535794-A-T 7667753-A-T YY*
7535809-C-T 7667768-C-T FTA17557 YY*
7535813-G-A 7667772-G-A YY*
7535815-G-A 7667774-G-A BY65729 YY*
7535817-G-A 7667776-G-A YY*
7535825-C-CCT 7667784-C-CCT *
7535837-A-T 7667796-A-T YY*
7535847-T-G 7667806-T-G YY*
7846945-GTTT- *
8314146-CT-C,CTTT 8446105-CT-C,CTTT 24×T*
8731969-T- *
8762207-A-C 8894166-A-C YY*
8888375-C-CGTTT 9020334-C-CGTTT 25×T*
10034727-G-GGGGGGGGGGCCCC 10197118-G-GGGGGGGGGGCCCC *
10034745-T-C 10197136-T-C Y*
10663882-C-G *
10663886-C-T *
10663897-C-G *
10663901-CCAATG-C *
10678044-C-CCATTCCATTCCATTCAAT *
10686379-C-T *
10755529-GTCCACTCCACTCAAATCAACTCCATTCCATTCCATTCCACTACATTCCATTCCATTCCACTACATTCCACTTTATTCCAATCCACTCCATACCACTCCACTCCATTCATCTCCACTCCACTCCATTCCTC-G *
10757433-T-G *
10786806-C-T *
10811734-TC-T *
10843078-T-A *
10863097-A-T *
10868786-T-C *
10926110-C-T *
11010353-CCACT-C *
11011544-A-G *
11027509-T-G *
13252629-A-C 11096953-A-C *
13253603-C-A 11097927-C-A *
13253609-C-A 11097933-C-A *
13447573-G-T 11291897-G-T *
13448128-T-C 11292452-T-C *
13448796-CTCCGTTCCACTCCACTCCACTGCATTCCAT-C 11293120-CTCCGTTCCACTCCACTCCACTGCATTCCAT-C *
13448836-CTCCATTCCATTCCACTACAGTCCAT-C,CTCCATTCCATTCCATTCCATTCCACTACAGTCCAT 11293160-CTCCATTCCATTCCACTACAGTCCAT-C,CTCCATTCCATTCCATTCCATTCCACTACAGTCCAT *
13458092-A-T 11302416-A-T *
13458117-A-C 11302441-A-C *
13483594-AGTTACATCACCTGGGTGTTCAGTGCAGAGTTATGTCAAAATGCCCCCTTTTGGCAGAGCCTAGACAAGG-A 11327918-AGTTACATCACCTGGGTGTTCAGTGCAGAGTTATGTCAAAATGCCCCCTTTTGGCAGAGCCTAGACAAGG-A *
13493086-A-G 11337410-A-G *
13564831-T-C 11409155-T-C *
13585514-T-G 11429838-T-G *
13712811-A-C 11557135-A-C DYZ17 *
13712812-T-A 11557136-T-A DYZ17 *
13712831-T-C 11557155-T-C DYZ17 *
13712833-G-C 11557157-G-C DYZ17 *
13712846-T-G 11557170-T-G DYZ17 *
13806190-A-G 11685484-A-G DYZ17 *
13823219-AATGGGATGGG-A,AATGGG 11702513-AATGGGATGGG-A,AATGGG DYZ17 9×ATGGG*
13944080-T-A 11823374-T-A Y*
14062010-CAA-C,CAAAA 11941304-CAA-C,CAAAA 34×A*
14143412-G-GAA,GAAA 12022706-G-GAA,GAAA 12×A*
12166079-T- *
14612335-TGATAGATAGATA-T,TGATA 12500541-TGATAGATAGATA-T,TGATA 12×GATA*
12501657-CTT- 26×T*
14667857-G-T 12555923-G-T YY*
15208708-G-A 13096794-G-A YY*
15262458-CAAAAA-C,CAAAAAAA 13150542-CAAAAA-C,CAAAAAAA 30×A*
13246880-GA-G,GAA 27×A*
15677504-TC-T 13565624-TC-T *
13565625-CAA- 16×A*
16009051-G-A 13897171-G-A Y*
16297356-T-TTTTTA 14185476-T-TTTTTA *
16505988-CTT-C,CTTTT 14394108-CTT-C,CTTTT 31×T*
16692118-A-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAACAAAAAAAAAAAAAAAAAAAAAC 14580238-A-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAACAAAAAAAAAAAAAAAAAAAAAC *
16913449-A-G 14801569-A-G YY*
16990223-CA-C,CAA 14878343-CA-C,CAA 24×A*
17096144-G-A 14984264-G-A Y*
17170188-T-TTTTA 15058308-T-TTTTA *
15084869-TAGAAAGAA- 14×AGAA*
17196756-A-G,G 15084876-A-G,G *
17196757-A-T,T 15084877-A-T,T *
17575517-TAGCTGGCTCTTGCTTC-T 15463637-TAGCTGGCTCTTGCTTC-T *
17604955-TGAGAC-T 15493075-TGAGAC-T *
17604961-TGAG-T 15493081-TGAG-T *
17731014-CA-C,CAAAAA 15619134-CA-C,CAAAAA 35×A*
17821825-GA-G,TA 15709945-GA-G,TA 17×A*
17923746-A-AAAAGAAAG,AAAAGAAAGAAAG 15811866-A-AAAAGAAAG,AAAAGAAAGAAAG 11×AAAG*
17977736-CA-C 15865856-CA-C 8×A*
18381118-T-G 16269238-T-G P6_Prx *
18381122-A-C 16269242-A-C P6_Prx *
18381123-A-C 16269243-A-C P6_Prx *
18381126-A-C 16269246-A-C P6_Prx *
18381135-A-C 16269255-A-C P6_Prx *
18973374-G-GA 16861494-G-GA 9×A*
19513143-C-CT,CTT 17401263-C-CT,CTT 20×T*
19604838-ATTAC-A 17492958-ATTAC-A P5_Prx *
20104244-A-AGAAAG 17992364-A-AGAAAG P5_Dst 13×G*
20570088-C-G 18408202-C-G P5_Dst *
20989154-CAT-C,C 18827268-CAT-C,C P4_Dst 19×AT*
20989158-T-C,C 18827272-T-C,C P4_Dst *
21050693-GTCTA-G,GTCTATCTA 18888807-GTCTA-G,GTCTATCTA 11×TCTA*
21306590-C-CAAAAAAAAAA,CAAAAAAAAAA 19144704-C-CAAAAAAAAAA,CAAAAAAAAAA 27×A*
22230869-C-A 20068983-C-A DYZ19 *
22440021-G-C 20278135-G-C FT456394 DYZ19 *
22723386-C-CAAAA 20561500-C-CAAAA 17×A*
23070772-CTTTTTTT-C 20908886-CTTTTTTT-C 29×T*
23234708-C-CTTCT,CTTCTTTCT 21072822-C-CTTCT,CTTCTTTCT 17×TTCT*
23505495-C-CAAA,CAAA 21343609-C-CAAA,CAAA 23×A*
23800601-T-G 21638715-T-G Y*
26247562-A-T 24101415-A-T P1_Y1 *
28007010-T-G 25860863-T-G P1_Y2 *
28554407-A-AG 26408260-A-AG *
28556300-A-C 26410153-A-C *
28665371-CT-C 26519224-CT-C *
56832336-A-ATTCCATTCCACTCCT,ATTCCATTCCACTCCTTTCCATTCCACTCCT *
56833871-A-ACTCCC *
56837018-CTCAAT- *

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.