Rodgers
FTDNA: 347602, BigY2: 347602Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 347602 | BigY2 347602 |
---|---|---|---|---|---|---|---|---|---|
27996127-G-GA | 25849980-G-GA | P1_Y2 | 14×A | A+ | |||||
22310486-C-A | 20148600-C-A | DYZ19 | A* | ||||||
20294520-G-A | 18132634-G-A | P5_Dst | A* | ||||||
22310485-T-A | 20148599-T-A | DYZ19 | A* | ||||||
2842206-C-CTATT | 2974165-C-CTATT | 9×TATT | + | ||||||
14221447-C-G | 12100741-C-G | A5880 | Y | Y | + | + | |||
22807606-C-T | 20645720-C-T | A5881 | Y | Y | + | + | |||
24391663-C-A | 22245516-C-A | A5882 | Y | + | + | ||||
8972934-TA-T | 9135325-TA-T | 9×A | + | + | |||||
15463403-A-AT | 13351523-A-AT | 10×T | + | + | |||||
19885255-C-T | 17773375-C-T | P5_Prx | *** | * | |||||
22302464-T-A | 20140578-T-A | DYZ19 | *** | * | |||||
27902197-C-CT | 25756050-C-CT | P1_Y2 | 34×T | ** | |||||
16277219-A-C | 14165339-A-C | ** | |||||||
2778500-C-G | 2910459-C-G | ** | ** | ||||||
14175005-C-A | 12054299-C-A | ** | ** | ||||||
2738762-TC-T | 2870721-TC-T | ** | |||||||
15971224-TC-T | 13859344-TC-T | ** | |||||||
19013126-C-A | 16901246-C-A | ** | |||||||
21459875-C-T | 19297989-C-T | Z11858 M8877 | ** | ||||||
13854315-C-A | 11733609-C-A | ** | |||||||
22236283-G-A | 20074397-G-A | DYZ19 | ** | ||||||
23223294-T-C | 21061408-T-C | ** | |||||||
23311268-C-T | 21149382-C-T | ** | |||||||
13485293-T-C | 11329617-T-C | ** | |||||||
10935588-A-G | ** | ||||||||
4630656-G-T | 4762615-G-T | ** | |||||||
10889612-G-T | FGCLR49 | ** | |||||||
19507146-C-A | 17395266-C-A | ** | |||||||
17380158-C-A | 15268278-C-A | ** | |||||||
10746944-A-G | ** | ||||||||
17802140-C-A | 15690260-C-A | ** | |||||||
13200459-C-A | 11044783-C-A | ** | |||||||
10964742-C-A | ** | ||||||||
14467757-C-A | 12347026-C-A | ** | |||||||
25995161-GTA-G | 23849014-GTA-G | P1_Y1 | ** | ||||||
10651953-G-T | ** | ||||||||
17589070-C-A | 15477190-C-A | ** | |||||||
28506832-C-A | 26360685-C-A | ** | |||||||
10982173-C-T | ** | ||||||||
10982176-G-C | ** | ||||||||
10982186-A-T | ** | ||||||||
28517234-C-A | 26371087-C-A | ** | |||||||
6132394-C-A | 6264353-C-A | ** | |||||||
10625726-C-A | ** | ||||||||
4424497-G-T | 4556456-G-T | ** | |||||||
19200940-C-CAG | 17089060-C-CAG | 10×AG | ** | ||||||
56834609-A-ATTCTT | ** | ||||||||
16932043-A-G | 14820163-A-G | ** | |||||||
21211821-C-A | 19049935-C-A | ** | |||||||
15423837-G-T | 13311957-G-T | ** | |||||||
20275386-A-AG | 18113500-A-AG | P5_Dst | ** | ||||||
25954345-T-C | 23808198-T-C | P1_Y1 | ** | ||||||
25894197-TC-T | 23748050-TC-T | P1_Y1 | ** | ||||||
10746946-T-A | ** | ||||||||
13454501-C-A | 11298825-C-A | ** | |||||||
20943482-TG-T | 18781596-TG-T | P4_Dst | ** | ||||||
10657404-C-G | ** | ||||||||
2649781-C-G | 2781740-C-G | ** | |||||||
14561811-C-A | 12450012-C-A | ** | |||||||
21752615-G-T | ** | ||||||||
13933001-C-A | 11812295-C-A | ** | |||||||
14526812-C-A | 12415013-C-A | ** | |||||||
5927042-G-T | 6059001-G-T | ** | |||||||
28609552-CTTTTT-C | 26463405-CTTTTT-C | 17×T | ** | ||||||
17092538-C-A | 14980658-C-A | ** | |||||||
19622199-C-A | 17510319-C-A | P5_Prx | ** | ||||||
28560229-C-A | 26414082-C-A | ** | |||||||
14909561-C-A | 12797628-C-A | ** | |||||||
10968336-C-A | FT438528 | ** | |||||||
14992944-C-A | 12881029-C-A | ** | |||||||
14367949-G-T | 12247245-G-T | ** | |||||||
4159990-C-A | 4291949-C-A | ** | |||||||
7358204-C-A | 7490163-C-A | ** | |||||||
10657398-T-C | ** | ||||||||
14427406-T-TAA | 12306681-T-TAA | 12×A | ** | ||||||
15218673-C-A | 13106759-C-A | ** | |||||||
14502583-C-A | 12390788-C-A | ** | |||||||
15285879-C-A | 13173978-C-A | ** | |||||||
10032854-C-A | 10195245-C-A | ** | |||||||
18956153-C-A | 16844273-C-A | ** | |||||||
6858617-TG-T | 6990576-TG-T | ** | |||||||
16777851-C-A | 14665971-C-A | ** | |||||||
9987601-C-A | 10149992-C-A | ** | |||||||
10772473-CTCCAA-C | ** | ||||||||
25395797-C-A | 23249650-C-A | P2_r2 | ** | ||||||
10986839-CTCCAT-C | ** | ||||||||
26419224-C-A | 24273077-C-A | P1_Y1 | ** | ||||||
6772173-C-A | 6904132-C-A | ** | |||||||
2684151-C-A | 2816110-C-A | ** | |||||||
15756539-C-A | 13644659-C-A | ** | |||||||
17480128-A-G | 15368248-A-G | ** | |||||||
9852739-C-A | 10015130-C-A | ** | |||||||
15679783-C-A | 13567903-C-A | ** | |||||||
56834565-T-A | ** | ||||||||
56834575-C-G | ** | ||||||||
4862838-C-A | 4994797-C-A | ** | |||||||
3093206-C-A | 3225165-C-A | ** | |||||||
15127852-C-A | 13015939-C-A | ** | |||||||
14367838-G-T | 12247134-G-T | ** | |||||||
6318929-A-AC | 6450888-A-AC | IR3_Dst | ** | ||||||
17433749-C-A | 15321869-C-A | ** | |||||||
16765517-C-A | 14653637-C-A | ** | |||||||
28370131-G-T | 26223984-G-T | P1_gr2 | ** | ||||||
15677181-CT-C | 13565301-CT-C | ** | |||||||
6040148-C-A | 6172107-C-A | ** | |||||||
18546979-C-A | 16435099-C-A | ** | |||||||
10969259-T-C | ** | ||||||||
15790466-C-A | 13678586-C-A | ** | |||||||
18329059-T-C | 16217179-T-C | P6_Prx | ** | ||||||
16297184-C-A | 14185304-C-A | ** | |||||||
18274940-G-T | 16163060-G-T | P6_Prx | ** | ||||||
5966210-C-A | 6098169-C-A | ** | |||||||
13946227-C-A | 11825521-C-A | ** | |||||||
7916993-C-A | 8048952-C-A | ** | |||||||
21253928-C-A | 19092042-C-A | ** | |||||||
4902181-C-A | 5034140-C-A | ** | |||||||
14505930-C-A | 12394135-C-A | ** | |||||||
18730690-C-A | 16618810-C-A | ** | |||||||
11017770-C-A | ** | ||||||||
23231532-C-A | 21069646-C-A | ** | |||||||
24252247-A-G | 22106100-A-G | P3_b1 | ** | ||||||
26024550-T-TC | 23878403-T-TC | P1_Y1 | ** | ||||||
22055472-C-A | 19893586-C-A | ** | |||||||
5264361-G-T | 5396320-G-T | ** | |||||||
27864383-C-T | 25718236-C-T | P1_Y2 | 22×T | ** | |||||
15997551-C-A | 13885671-C-A | ** | |||||||
22189083-C-A | 20027197-C-A | ** | |||||||
6934658-C-A | 7066617-C-A | ** | |||||||
15379889-G-A | 13268009-G-A | ** | |||||||
4781109-G-T | 4913068-G-T | ** | |||||||
10889592-T-A | ** | ||||||||
10889605-C-G | ** | ||||||||
10889610-A-C | ** | ||||||||
14714952-G-T | 12603019-G-T | ** | |||||||
4557739-C-A | 4689698-C-A | ** | |||||||
15084618-C-A | 12972708-C-A | ** | |||||||
10031149-C-A | 10193540-C-A | ** | |||||||
17739998-C-A | 15628118-C-A | ** | |||||||
21796534-C-A | 19634648-C-A | ** | |||||||
22203729-C-A | 20041843-C-A | ** | |||||||
4437960-C-A | 4569919-C-A | ** | |||||||
4950985-C-A | 5082944-C-A | ** | |||||||
17633708-C-A | 15521828-C-A | ** | |||||||
16270517-C-A | 14158637-C-A | ** | |||||||
28772907-C-A | 26626760-C-A | ** | |||||||
9424538-C-A | 9586929-C-A | ** | |||||||
3847447-C-A | 3979406-C-A | ** | |||||||
3061210-C-A | 3193169-C-A | ** | |||||||
6828784-C-A | 6960743-C-A | ** | |||||||
3725748-C-A | 3857707-C-A | ** | |||||||
16384838-T-C | 14272958-T-C | ** | |||||||
11656461-C-A | ** | ||||||||
17928006-C-A | 15816126-C-A | ** | |||||||
10850864-C-A | ** | ||||||||
10873413-C-A | ** | ||||||||
13824950-C-A | 11704244-C-A | ** | |||||||
2948187-C-A | 3080146-C-A | ** | |||||||
28764184-T-C | 26618037-T-C | ** | |||||||
19622163-C-A | 17510283-C-A | P5_Prx | ** | ||||||
4887931-C-A | 5019890-C-A | ** | |||||||
6510775-C-A | 6642734-C-A | ** | |||||||
14981973-C-A | 12870041-C-A | ** | |||||||
28767166-C-A | 26621019-C-A | ** | |||||||
13974069-G-T | 11853363-G-T | FT236459 | ** | ||||||
20839477-C-A | 18677591-C-A | P4_Gap | ** | ||||||
7418425-C-A | 7550384-C-A | ** | |||||||
14505339-C-A | 12393544-C-A | 12×A | ** | ||||||
13282789-C-A | 11127113-C-A | ** | |||||||
14911082-C-A | 12799149-C-A | ** | |||||||
10812732-C-A | ** | ||||||||
14225415-C-A | 12104709-C-A | ** | |||||||
15515242-C-A | 13403362-C-A | ** | |||||||
14187154-C-A | 12066448-C-A | ** | |||||||
19155160-C-A | 17043280-C-A | ** | |||||||
3229178-AAG-A | 3361137-AAG-A | ** | |||||||
3598990-C-A | 3730949-C-A | ** | |||||||
10828948-C-A | ** | ||||||||
28649233-C-A | 26503086-C-A | ** | |||||||
10669608-C-A | ** | ||||||||
3951437-T-A | 4083396-T-A | ** | |||||||
11008244-C-A | ** | ||||||||
27866072-T-TC | 25719925-T-TC | P1_Y2 | ** | ||||||
18247358-C-A | 16135478-C-A | ** | |||||||
13332378-C-A | 11176702-C-A | ** | |||||||
16914375-C-A | 14802495-C-A | ** | |||||||
14009371-C-A | 11888665-C-A | ** | |||||||
7110422-C-A | 7242381-C-A | ** | |||||||
16720751-G-T | 14608871-G-T | ** | |||||||
7082825-T-C | 7214784-T-C | ** | |||||||
3332566-C-A | 3464525-C-A | ** | |||||||
22426931-C-A | 20265045-C-A | DYZ19 | ** | ||||||
14295651-C-A | 12174945-C-A | ** | |||||||
5358784-C-A | 5490743-C-A | ** | |||||||
13856887-C-A | 11736181-C-A | ** | |||||||
13472198-C-T | 11316522-C-T | ** | |||||||
5215416-T-C | 5347375-T-C | ** | |||||||
5107492-C-A | 5239451-C-A | ** | |||||||
15403414-C-A | 13291534-C-A | ** | |||||||
14361651-T-C | 12240946-T-C | ** | |||||||
19547279-C-A | 17435399-C-A | ** | |||||||
10969275-C-T | ** | ||||||||
5320806-G-T | 5452765-G-T | ** | |||||||
28609439-C-A | 26463292-C-A | ** | |||||||
56831681-G-T | ** | ||||||||
14102098-C-A | 11981392-C-A | ** | |||||||
4077721-C-A | 4209680-C-A | ** | |||||||
23459599-C-A | 21297713-C-A | ** | |||||||
23061930-G-T | 20900044-G-T | ** | |||||||
14472944-C-A | 12352213-C-A | ** | |||||||
28612334-C-A | 26466187-C-A | ** | |||||||
20084416-C-CTTTA | 17972536-C-CTTTA | P5_Dst | ** | ||||||
17217075-C-A | 15105195-C-A | ** | |||||||
21752592-G-T | ** | ||||||||
14184482-C-A | 12063776-C-A | ** | |||||||
5368290-G-T | 5500249-G-T | ** | |||||||
3833976-C-A | 3965935-C-A | ** | |||||||
14328328-C-A | 12207622-C-A | ** | |||||||
14786543-T-G | 12674613-T-G | ** | |||||||
5609678-C-A | 5741637-C-A | ** | |||||||
5368308-G-T | 5500267-G-T | ** | |||||||
14286945-C-T | 12166239-C-T | ** | |||||||
14367906-A-G | 12247202-A-G | ** | |||||||
8704319-C-A | 8836278-C-A | ** | |||||||
13486751-T-G | 11331075-T-G | ** | |||||||
27864404-TTA-T | 25718257-TTA-T | P1_Y2 | ** | ||||||
19785367-A-C | 17673487-A-C | P5_Prx | ** | ||||||
13565040-C-A | 11409364-C-A | ** | |||||||
17474708-C-A | 15362828-C-A | ** | |||||||
8911520-C-A | 9043479-C-A | ** | |||||||
28771623-C-A | 26625476-C-A | FT461438 | ** | ||||||
14442994-C-A | 12322267-C-A | ** | |||||||
7935635-T-A | 8067594-T-A | ** | |||||||
5817757-C-A | 5949716-C-A | ** | |||||||
27719837-G-T | 25573690-G-T | P1_Y2 | ** | ||||||
15431969-C-A | 13320089-C-A | ** | |||||||
21911056-C-A | 19749170-C-A | ** | |||||||
17798766-GA-G | 15686886-GA-G | ** | |||||||
2773575-G-T | 2905534-G-T | ** | |||||||
2778472-A-G | 2910431-A-G | ** | |||||||
2778489-A-T | 2910448-A-T | ** | |||||||
2885570-C-A | 3017529-C-A | ** | |||||||
2892585-A-C | 3024544-A-C | ** | |||||||
3011558-C-A | 3143517-C-A | ** | |||||||
3073747-A-G | 3205706-A-G | ** | |||||||
3147766-C-A | 3279725-C-A | ** | |||||||
3181377-T-C | 3313336-T-C | ** | |||||||
3181397-T-C | 3313356-T-C | ** | |||||||
3181420-T-G | 3313379-T-G | ** | |||||||
3181542-T-C | 3313501-T-C | ** | |||||||
3275301-G-T | 3407260-G-T | ** | |||||||
3279928-T-A | 3411887-T-A | ** | |||||||
3477782-C-T | 3609741-C-T | ** | |||||||
3483763-A-G | 3615722-A-G | ** | |||||||
3591902-A-C | 3723861-A-C | ** | |||||||
3847431-T-G | 3979390-T-G | ** | |||||||
3951492-C-A | 4083451-C-A | ** | |||||||
4094121-C-A | 4226080-C-A | ** | |||||||
4232877-G-T | 4364836-G-T | FT95318 | ** | ||||||
4298848-GA-G | 4430807-GA-G | ** | |||||||
4301296-C-A | 4433255-C-A | ** | |||||||
4374280-A-G | 4506239-A-G | ** | |||||||
4397839-C-A | 4529798-C-A | ** | |||||||
4417962-G-A | 4549921-G-A | ** | |||||||
4437948-A-G | 4569907-A-G | ** | |||||||
4724247-C-A | 4856206-C-A | ** | |||||||
4842112-G-A | 4974071-G-A | ** | |||||||
4842138-A-G | 4974097-A-G | ** | |||||||
4842246-A-G | 4974205-A-G | ** | |||||||
4916903-G-T | 5048862-G-T | ** | |||||||
5191454-T-C | 5323413-T-C | ** | |||||||
5220355-G-A | 5352314-G-A | ** | |||||||
5220452-C-A | 5352411-C-A | ** | |||||||
5291918-C-A | 5423877-C-A | ** | |||||||
5368256-G-A | 5500215-G-A | ** | |||||||
5368310-C-A | 5500269-C-A | ** | |||||||
5425170-C-A | 5557129-C-A | ** | |||||||
5495383-A-G | 5627342-A-G | ** | |||||||
5530862-C-T | 5662821-C-T | ** | |||||||
5596214-G-T | 5728173-G-T | ** | |||||||
5755955-T-A | 5887914-T-A | ** | |||||||
5796649-C-A | 5928608-C-A | ** | |||||||
5839528-G-T | 5971487-G-T | FT156272 | ** | ||||||
5853676-C-T | 5985635-C-T | FT251007 | ** | ||||||
5906040-G-T | 6037999-G-T | ** | |||||||
5967427-G-T | 6099386-G-T | ** | |||||||
5968402-A-C | 6100361-A-C | ** | |||||||
5993628-G-T | 6125587-G-T | FTB14502 | ** | ||||||
6005190-T-A | 6137149-T-A | ** | |||||||
6012666-A-T | 6144625-A-T | ** | |||||||
6013107-C-A | 6145066-C-A | ** | |||||||
6037432-A-T | 6169391-A-T | ** | |||||||
6064152-C-A | 6196111-C-A | ** | |||||||
6091056-T-C | 6223015-T-C | ** | |||||||
6092443-G-A | 6224402-G-A | ** | |||||||
6097255-C-A | 6229214-C-A | ** | |||||||
6247070-G-T | 6379029-G-T | IR3_Dst | ** | ||||||
6458373-A-G | 6590332-A-G | ** | |||||||
6516238-T-G | 6648197-T-G | ** | |||||||
6523615-C-A | 6655574-C-A | FT287666 | ** | ||||||
6541328-T-G | 6673287-T-G | ** | |||||||
6581818-C-G | 6713777-C-G | ** | |||||||
6581904-T-A | 6713863-T-A | ** | |||||||
6619634-GT-G | 6751593-GT-G | ** | |||||||
6644743-C-G | 6776702-C-G | ** | |||||||
6648314-G-A | 6780273-G-A | ** | |||||||
6682240-C-G | 6814199-C-G | ** | |||||||
6786911-A-G | 6918870-A-G | 17×T | ** | ||||||
6787103-T-G | 6919062-T-G | ** | |||||||
6892192-G-C | 7024151-G-C | ** | |||||||
6917649-C-A | 7049608-C-A | ** | |||||||
6927085-C-A | 7059044-C-A | ** | |||||||
6934715-T-G | 7066674-T-G | ** | |||||||
7020572-C-A | 7152531-C-A | ** | |||||||
7062483-G-T | 7194442-G-T | ** | |||||||
7093623-A-G | 7225582-A-G | ** | |||||||
7093631-A-G | 7225590-A-G | ** | |||||||
7163236-T-C | 7295195-T-C | ** | |||||||
7172533-G-A | 7304492-G-A | ** | |||||||
7214336-T-C | 7346295-T-C | ** | |||||||
7218215-G-T | 7350174-G-T | ** | |||||||
7228232-C-A | 7360191-C-A | ** | |||||||
7233023-T-C | 7364982-T-C | ** | |||||||
7236639-A-G | 7368598-A-G | ** | |||||||
7338855-A-C | 7470814-A-C | ** | |||||||
7420557-C-A | 7552516-C-A | ** | |||||||
7423905-CT-C | 7555864-CT-C | ** | |||||||
7621913-G-T | 7753872-G-T | ** | |||||||
7643054-A-G | 7775013-A-G | ** | |||||||
7670718-C-A | 7802677-C-A | ** | |||||||
7756940-C-A | 7888899-C-A | ** | |||||||
7756945-C-T | 7888904-C-T | ** | |||||||
7970314-A-G | 8102273-A-G | ** | |||||||
7985906-G-T | 8117865-G-T | ** | |||||||
8077396-C-A | 8209355-C-A | ** | |||||||
8077463-C-A | 8209422-C-A | ** | |||||||
8731070-A-T | 8863029-A-T | ** | |||||||
8974361-G-T | 9136752-G-T | ** | |||||||
9020514-C-A | 9182905-C-A | ** | |||||||
9094607-A-C | 9256998-A-C | ** | |||||||
9416915-C-A | 9579306-C-A | ** | |||||||
9605394-T-C | 9767785-T-C | IR3_Prx | ** | ||||||
9605398-T-C | 9767789-T-C | IR3_Prx | ** | ||||||
9605415-T-C | 9767806-T-C | IR3_Prx | ** | ||||||
9706742-G-T | 9869133-G-T | IR3_Prx | ** | ||||||
9830749-G-T | 9993140-G-T | ** | |||||||
9877862-C-G | 10040253-C-G | ** | |||||||
10029390-T-G | 10191781-T-G | ** | |||||||
10627574-C-A | ** | ||||||||
10645869-T-G | ** | ||||||||
10645928-C-A | ** | ||||||||
10669436-T-TTCCAC | ** | ||||||||
10812401-C-T | FT432286 | ** | |||||||
10860155-C-A | ** | ||||||||
10860221-C-A | ** | ||||||||
10873074-A-G | ** | ||||||||
10959254-G-A | FT438233 | ** | |||||||
13218753-G-A | 11063077-G-A | ** | |||||||
13316211-A-G | 11160535-A-G | ** | |||||||
13330240-C-A | 11174564-C-A | ** | |||||||
13350244-T-C | 11194568-T-C | ** | |||||||
13405133-T-C | 11249457-T-C | ** | |||||||
13421513-C-A | 11265837-C-A | ** | |||||||
13465131-C-A | 11309455-C-A | ** | |||||||
13483100-G-C | 11327424-G-C | ** | |||||||
13580029-C-G | 11424353-C-G | ** | |||||||
13643891-A-C | 11488215-A-C | ** | |||||||
13848186-A-T | 11727480-A-T | ** | |||||||
13935704-G-C | 11814998-G-C | ** | |||||||
13952677-A-G | 11831971-A-G | ** | |||||||
13974126-G-T | 11853420-G-T | ** | |||||||
13987278-A-G | 11866572-A-G | ** | |||||||
14006587-C-A | 11885881-C-A | ** | |||||||
14029485-T-G | 11908779-T-G | ** | |||||||
14038285-C-A | 11917579-C-A | ** | |||||||
14091028-C-A | 11970322-C-A | ** | |||||||
14147813-A-C | 12027107-A-C | ** | |||||||
14181153-C-G | 12060447-C-G | ** | |||||||
14240462-A-G | 12119756-A-G | ** | |||||||
14285853-T-G | 12165147-T-G | ** | |||||||
14385724-T-C | 12265020-T-C | ** | |||||||
14386154-G-T | 12265450-G-T | ** | |||||||
14446607-C-A | 12325880-C-A | ** | |||||||
14448382-T-A | 12327655-T-A | ** | |||||||
14452729-C-T | 12332002-C-T | ** | |||||||
14458159-A-T | 12337432-A-T | ** | |||||||
14505920-T-G | 12394125-T-G | ** | |||||||
14544074-G-C | 12432275-G-C | ** | |||||||
14546465-T-C | 12434666-T-C | ** | |||||||
14550642-C-A | 12438843-C-A | ** | |||||||
14552689-C-A | 12440890-C-A | ** | |||||||
14561795-T-C | 12449996-T-C | ** | |||||||
14566570-C-G | 12454770-C-G | ** | |||||||
14786449-C-G | 12674519-C-G | ** | |||||||
14786469-G-T | 12674539-G-T | ** | |||||||
14786509-G-A | 12674579-G-A | ** | |||||||
14786512-T-G | 12674582-T-G | ** | |||||||
14786538-T-G | 12674608-T-G | ** | |||||||
14798340-C-A | 12686411-C-A | ** | |||||||
14871358-G-C | 12759428-G-C | ** | |||||||
15193604-T-C | 13081690-T-C | ** | |||||||
15221814-A-T | 13109900-A-T | ** | |||||||
15370244-T-A | 13258364-T-A | ** | |||||||
15423895-A-T | 13312015-A-T | ** | |||||||
15423920-A-C | 13312040-A-C | ** | |||||||
15423961-G-C | 13312081-G-C | ** | |||||||
15619081-T-A | 13507201-T-A | ** | |||||||
15636266-G-T | 13524386-G-T | ** | |||||||
15743072-T-C | 13631192-T-C | ** | |||||||
15922095-G-T | 13810215-G-T | ** | |||||||
16033445-G-C | 13921565-G-C | ** | |||||||
16038056-C-G | 13926176-C-G | ** | |||||||
16054719-A-C | 13942839-A-C | ** | |||||||
16055449-A-G | 13943569-A-G | ** | |||||||
16060449-G-C | 13948569-G-C | ** | |||||||
16060469-A-C | 13948589-A-C | ** | |||||||
16146588-T-A | 14034708-T-A | P8_Dst | ** | ||||||
16148184-T-TTTG | 14036304-T-TTTG | P8_Dst | ** | ||||||
16245269-G-T | 14133389-G-T | ** | |||||||
16270406-A-G | 14158526-A-G | ** | |||||||
16275962-C-G | 14164082-C-G | ** | |||||||
16336095-TC-T | 14224215-TC-T | ** | |||||||
16468366-G-T | 14356486-G-T | ** | |||||||
16484296-T-C | 14372416-T-C | ** | |||||||
16540104-T-C | 14428224-T-C | ** | |||||||
16553846-C-T | 14441966-C-T | ** | |||||||
16884946-C-A | 14773066-C-A | ** | |||||||
16930494-C-A | 14818614-C-A | ** | |||||||
16930496-C-G | 14818616-C-G | ** | |||||||
16930510-T-G | 14818630-T-G | ** | |||||||
16930512-T-G | 14818632-T-G | ** | |||||||
17126072-C-G | 15014192-C-G | ** | |||||||
17219185-G-T | 15107305-G-T | ** | |||||||
17363108-A-G | 15251228-A-G | ** | |||||||
17363164-A-G | 15251284-A-G | ** | |||||||
17366841-C-A | 15254961-C-A | ** | |||||||
17374715-A-G | 15262835-A-G | ** | |||||||
17385533-C-A | 15273653-C-A | ** | |||||||
17445518-G-A | 15333638-G-A | ** | |||||||
17465082-G-T | 15353202-G-T | ** | |||||||
17474875-C-A | 15362995-C-A | ** | |||||||
17480180-A-G | 15368300-A-G | ** | |||||||
17480198-T-G | 15368318-T-G | ** | |||||||
17548685-A-G | 15436805-A-G | ** | |||||||
17548742-G-A | 15436862-G-A | ** | |||||||
17549524-T-G | 15437644-T-G | ** | |||||||
17569184-C-A | 15457304-C-A | ** | |||||||
17739807-T-A | 15627927-T-A | ** | |||||||
17963495-C-A | 15851615-C-A | ** | |||||||
18050517-G-C | 15938637-G-C | ** | |||||||
18132989-G-T | 16021109-G-T | ** | |||||||
18329100-A-C | 16217220-A-C | P6_Prx | ** | ||||||
18384353-C-A | 16272473-C-A | P6_Gap | ** | ||||||
18389368-C-A | 16277488-C-A | P6_Gap | ** | ||||||
18631043-A-G | 16519163-A-G | ** | |||||||
18673816-C-A | 16561936-C-A | ** | |||||||
18848806-G-T | 16736926-G-T | ** | |||||||
18951252-T-C | 16839372-T-C | ** | |||||||
19053230-C-A | 16941350-C-A | ** | |||||||
19125655-A-T | 17013775-A-T | ** | |||||||
19126398-C-T | 17014518-C-T | ** | |||||||
19300238-C-A | 17188358-C-A | FT193889 | ** | ||||||
19302476-A-G | 17190596-A-G | ** | |||||||
19438317-A-G | 17326437-A-G | ** | |||||||
19507179-A-G | 17395299-A-G | ** | |||||||
19597119-T-G | 17485239-T-G | P5_Prx | ** | ||||||
19597121-C-T | 17485241-C-T | P5_Prx | ** | ||||||
19647572-T-TC | 17535692-T-TC | P5_Prx | ** | ||||||
19699952-A-C | 17588072-A-C | P5_Prx | ** | ||||||
19699968-G-C | 17588088-G-C | P5_Prx | ** | ||||||
19739351-A-ACAT | 17627471-A-ACAT | P5_Prx | ** | ||||||
19817579-G-C | 17705699-G-C | P5_Prx | ** | ||||||
20255002-T-A | 18093116-T-A | P5_Dst | ** | ||||||
20458339-G-T | 18296453-G-T | P5_Dst | ** | ||||||
20569446-T-C | 18407560-T-C | P5_Dst | ** | ||||||
20778781-TTGTGTGTG-T | 18616895-TTGTGTGTG-T | P4_Prx | 18×TG | ** | |||||
20798665-A-G | 18636779-A-G | P4_Prx | ** | ||||||
20798689-C-G | 18636803-C-G | P4_Prx | ** | ||||||
20839006-C-A | 18677120-C-A | P4_Gap | ** | ||||||
21087061-C-A | 18925175-C-A | ** | |||||||
21177008-G-T | 19015122-G-T | ** | |||||||
21201246-A-C | 19039360-A-C | ** | |||||||
21202265-A-G | 19040379-A-G | ** | |||||||
21225121-A-G | 19063235-A-G | ** | |||||||
21336190-A-G | 19174304-A-G | ** | |||||||
21346368-A-C | 19184482-A-C | ** | |||||||
21391590-T-A | 19229704-T-A | 12×A | ** | ||||||
21409690-C-A | 19247804-C-A | ** | |||||||
21488957-C-A | 19327071-C-A | ** | |||||||
21624776-C-A | 19462890-C-A | ** | |||||||
21700557-G-A | 19538671-G-A | ** | |||||||
21737893-C-A | 19576007-C-A | ** | |||||||
21959241-C-A | 19797355-C-A | ** | |||||||
22018060-C-A | 19856174-C-A | ** | |||||||
22090363-A-G | 19928477-A-G | ** | |||||||
22263841-A-T | 20101955-A-T | DYZ19 | ** | ||||||
22853481-G-T | 20691595-G-T | ** | |||||||
22880787-C-T | 20718901-C-T | ** | |||||||
22893418-G-T | 20731532-G-T | ** | |||||||
22956022-A-T | 20794136-A-T | ** | |||||||
22956074-T-A | 20794188-T-A | ** | |||||||
22988561-G-A | 20826675-G-A | ** | |||||||
23037959-C-T | 20876073-C-T | ** | |||||||
23076291-T-C | 20914405-T-C | ** | |||||||
23096561-C-A | 20934675-C-A | ** | |||||||
23188282-A-G | 21026396-A-G | ** | |||||||
23200672-A-C | 21038786-A-C | ** | |||||||
23205918-G-C | 21044032-G-C | ** | |||||||
23440533-G-T | 21278647-G-T | ** | |||||||
23818958-C-A | 21657072-C-A | ** | |||||||
21783716-G-T | ** | ||||||||
23951963-G-C | 21805816-G-C | ** | |||||||
24071573-C-A | 21925426-C-A | P3_b1 | ** | ||||||
24302834-AAAAAAAG-A | 22156687-AAAAAAAG-A | P3_t1 | ** | ||||||
24375978-C-A | 22229831-C-A | ** | |||||||
25395794-A-G | 23249647-A-G | P2_r2 | ** | ||||||
25894078-G-T | 23747931-G-T | P1_Y1 | ** | ||||||
26024465-A-G | 23878318-A-G | P1_Y1 | ** | ||||||
26045821-T-C | 23899674-T-C | P1_Y1 | ** | ||||||
26046054-G-T | 23899907-G-T | P1_Y1 | ** | ||||||
26066308-A-G | 23920161-A-G | P1_Y1 | ** | ||||||
26066340-T-G | 23920193-T-G | P1_Y1 | ** | ||||||
26366387-A-G | 24220240-A-G | P1_Y1 | ** | ||||||
27484475-C-T | 25338328-C-T | P1_Y2 | ** | ||||||
27546630-T-G | 25400483-T-G | P1_Y2 | ** | ||||||
27618307-C-A | 25472160-C-A | P1_Y2 | ** | ||||||
27761295-G-GAAA | 25615148-G-GAAA | P1_Y2 | 15×A | ** | |||||
27810347-A-T | 25664200-A-T | P1_Y2 | ** | ||||||
27864413-GA-G | 25718266-GA-G | P1_Y2 | ** | ||||||
27866153-G-T | 25720006-G-T | P1_Y2 | ** | ||||||
28625491-G-T | 26479344-G-T | ** | |||||||
28644520-A-G | 26498373-A-G | ** | |||||||
28658501-C-A | 26512354-C-A | ** | |||||||
28687355-G-A | 26541208-G-A | ** | |||||||
28687372-T-G | 26541225-T-G | ** | |||||||
28687967-T-C | 26541820-T-C | ** | |||||||
28704031-C-A | 26557884-C-A | ** | |||||||
28704039-C-A | 26557892-C-A | ** | |||||||
28728374-T-C | 26582227-T-C | ** | |||||||
28743160-G-C | 26597013-G-C | ** | |||||||
28743179-A-C | 26597032-A-C | ** | |||||||
28764180-A-G | 26618033-A-G | ** | |||||||
28764188-T-C | 26618041-T-C | ** | |||||||
28781562-C-A | 26635415-C-A | ** | |||||||
28782108-A-G | 26635961-A-G | ** | |||||||
28798217-GA-G | 26652070-GA-G | ** | |||||||
56832792-T-C | ** | ||||||||
56832799-C-CACTCA | ** | ||||||||
56836483-C-G | ** | ||||||||
56858754-G-T | ** | ||||||||
56859869-G-T | ** | ||||||||
8398305-TTGTG-T | 8530264-TTGTG-T | 13×TG | *** | ||||||
22454265-G-A | 20292379-G-A | DYZ19 | *** | ||||||
22454260-G-T | 20292374-G-T | DYZ19 | *** | ||||||
10020467-AGGAAAGGAAAGGAAAG-A | 10182858-AGGAAAGGAAAGGAAAG-A | *** | |||||||
10039810-T-C | 10202201-T-C | *** | |||||||
14103159-C-A | 11982453-C-A | ZS791 | *** | ||||||
13489676-AC-A | 11334000-AC-A | *** | |||||||
10845636-C-T | *** | ||||||||
13628967-C-A | 11473291-C-A | *** | |||||||
9371457-CATATAT-C,CATAT | 9533848-CATATAT-C,CATAT | 22×AT | *** | ||||||
8874970-CTT-C,CT | 9006929-CTT-C,CT | 17×T | *** | ||||||
13477475-A-G | 11321799-A-G | *** | |||||||
10024465-C-A | 10186856-C-A | *** | |||||||
21211206-C-G | 19049320-C-G | *** | |||||||
21934980-ATTT-A,ATT | 19773094-ATTT-A,ATT | 17×T | *** | ||||||
15179208-C-A | 13067294-C-A | *** | |||||||
21992963-T-TA | 19831077-T-TA | 23×A | *** | ||||||
13453304-C-A | 11297628-C-A | *** | |||||||
10822617-A-T | *** | ||||||||
56832479-T-C,G | *** | ||||||||
2772746-T-C | 2904705-T-C | *** | |||||||
7000440-C-A | 7132399-C-A | *** | |||||||
28626071-CA-C | 26479924-CA-C | 8×A | *** | ||||||
16297434-C-A | 14185554-C-A | *** | |||||||
14639323-C-A | 12527392-C-A | *** | |||||||
10845655-C-T | *** | ||||||||
13196298-C-A | 11040622-C-A | *** | |||||||
21658483-C-A | 19496597-C-A | *** | |||||||
7188546-C-A | 7320505-C-A | *** | |||||||
13643156-C-A | 11487480-C-A | *** | |||||||
10789000-C-A | *** | ||||||||
10789464-C-T | *** | ||||||||
16057449-C-A | 13945569-C-A | *** | |||||||
3159005-A-T | 3290964-A-T | *** | |||||||
7061181-C-A | 7193140-C-A | *** | |||||||
7156792-A-G | 7288751-A-G | *** | |||||||
7156885-T-C | 7288844-T-C | *** | |||||||
7255759-G-T | 7387718-G-T | *** | |||||||
7319099-G-T | 7451058-G-T | *** | |||||||
7861310-A-T | 7993269-A-T | *** | |||||||
9140309-C-A | 9302700-C-A | *** | |||||||
9437466-C-A | 9599857-C-A | *** | |||||||
10668600-C-A | *** | ||||||||
10747937-C-A | *** | ||||||||
10761823-T-A | *** | ||||||||
10789039-A-T | *** | ||||||||
10807314-TG-T,TT | *** | ||||||||
10911696-C-T | *** | ||||||||
10958407-C-T | *** | ||||||||
13315985-C-A | 11160309-C-A | *** | |||||||
16002992-A-G | 13891112-A-G | *** | |||||||
17310894-T-C | 15199014-T-C | *** | |||||||
19250751-G-A | 17138871-G-A | *** | |||||||
21207134-T-A | 19045248-T-A | *** | |||||||
27035157-G-A | 24889010-G-A | P1_r4 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.