Tree Position

A0-T-YP2191 > P305[A1] > A1b > BT/A1b2 > M168/PF1416[CT] > M145/P205/PF144 > M96/PF1823 > P147 > P177 > M215 > M35 > Z827 > PF1957 > PF1962

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY3
MI57052
hg19:Y:22290561-G-A hg38:Y:20128675-G-A DYZ19 A+
hg19:Y:15731321-A-G hg38:Y:13619441-A-G YYA+
hg19:Y:3899072-A-G hg38:Y:4031031-A-G A+
hg19:Y:15731320-C-T hg38:Y:13619440-C-T YYA+
hg19:Y:15731328-C-T hg38:Y:13619448-C-T YYA+
hg19:Y:15731332-T-A hg38:Y:13619452-T-A YYA+
hg19:Y:15731336-T-C hg38:Y:13619456-T-C YYA+
hg19:Y:15731338-G-A hg38:Y:13619458-G-A YYA+
hg19:Y:20314763-G-T hg38:Y:18152877-G-T P5_Dst A+
hg19:Y:27574457-A-C hg38:Y:25428310-A-C P1_Y2 A+
hg19:Y:28817012-C-T hg38:Y:26670865-C-T A*
hg19:Y:3413996-A-G hg38:Y:3545955-A-G A*
hg19:Y:3095433-T-C hg38:Y:3227392-T-C A*
hg19:Y:6307381-C-T hg38:Y:6439340-C-T IR3_Dst A*
hg19:Y:18297985-T-A hg38:Y:16186105-T-A P6_Prx A*
hg19:Y:18342890-A-G hg38:Y:16231010-A-G P6_Prx A*
hg19:Y:19573202-C-T hg38:Y:17461322-C-T P5_Prx YA*
hg19:Y:19767958-G-A hg38:Y:17656078-G-A P5_Prx A*
hg19:Y:19865012-C-A hg38:Y:17753132-C-A P5_Prx A*
hg19:Y:19867794-T-C hg38:Y:17755914-T-C P5_Prx A*
hg19:Y:20084447-T-TTC hg38:Y:17972567-T-TTC P5_Dst A*
hg19:Y:23180243-T-G hg38:Y:21018357-T-G YA*
hg19:Y:24267248-C-T hg38:Y:22121101-C-T BY209101 P3_b1 A*
hg19:Y:24335442-A-G hg38:Y:22189295-A-G P3_t1 A*
hg19:Y:24337679-C-G hg38:Y:22191532-C-G P3_t1 A*
hg19:Y:25355047-A-AT hg38:Y:23208900-A-AT P2_r2 A*
hg19:Y:26035347-G-A hg38:Y:23889200-G-A P1_Y1 A*
hg19:Y:26358339-C-T hg38:Y:24212192-C-T P1_Y1 A*
hg19:Y:26381613-G-T hg38:Y:24235466-G-T P1_Y1 A*
hg19:Y:26493310-G-A hg38:Y:24347163-G-A P1_Y1 A*
hg19:Y:27604097-G-A hg38:Y:25457950-G-A P1_Y2 A*
hg19:Y:28817194-T-C hg38:Y:26671047-T-C A*
hg19:Y:28817499-T-G hg38:Y:26671352-T-G A*
hg38:Y:56861405-T-G A*
hg19:Y:14328881-G-A hg38:Y:12208175-G-A Y91080Y91080 YY+
hg19:Y:7457467-A-C hg38:Y:7589426-A-C BY65311 IR1_L +
hg38:Y:10930026-T-C +
hg19:Y:13936073-TA-T hg38:Y:11815367-TA-T 9×A+
hg19:Y:22229797-C-A hg38:Y:20067911-C-A BY213383 DYZ19 +
hg19:Y:21390969-A-G hg38:Y:19229083-A-G YY+
hg19:Y:22673411-C-T hg38:Y:20511525-C-T FGC18422 YY+
hg38:Y:10851877-G-A FT91878 +
hg38:Y:11677717-G-A DYZ17 +
hg19:Y:3108975-C-G hg38:Y:3240934-C-G FTB42140 +
hg19:Y:3241450-T-G hg38:Y:3373409-T-G FT65595 +
hg19:Y:3363314-G-C hg38:Y:3495273-G-C FTB42168 +
hg19:Y:3769449-T-C hg38:Y:3901408-T-C FTB42210 +
hg19:Y:4026480-G-A hg38:Y:4158439-G-A FT65611 +
hg19:Y:4081501-G-A hg38:Y:4213460-G-A +
hg19:Y:4388579-T-C hg38:Y:4520538-T-C +
hg19:Y:4791218-A-G hg38:Y:4923177-A-G +
hg19:Y:5047375-A-G hg38:Y:5179334-A-G FTB42326 +
hg19:Y:5135165-A-G hg38:Y:5267124-A-G FTB42331 +
hg19:Y:7351187-A-G hg38:Y:7483146-A-G FTB32658 YY+
hg19:Y:7351191-A-AT hg38:Y:7483150-A-AT +
hg19:Y:7387130-G-A hg38:Y:7519089-G-A YY+
hg19:Y:7425031-A-G hg38:Y:7556990-A-G YY+
hg19:Y:7462351-C-T hg38:Y:7594310-C-T FTB32681 IR1_L +
hg19:Y:7810235-G-A hg38:Y:7942194-G-A YY+
hg19:Y:8468962-C-G hg38:Y:8600921-C-G YY+
hg19:Y:8718254-T-A hg38:Y:8850213-T-A FTB32878 YY+
hg19:Y:9380728-C-G hg38:Y:9543119-C-G FTB42463 Y+
hg19:Y:9771884-A-G hg38:Y:9934275-A-G Y+
hg19:Y:9988295-C-A hg38:Y:10150686-C-A Y+
hg38:Y:10746106-T-G FT91595 +
hg38:Y:10896227-A-G FT435838 +
hg38:Y:10951796-C-T FT92086 +
hg19:Y:13598905-G-A hg38:Y:11443229-G-A +
hg19:Y:13632339-G-A hg38:Y:11476663-G-A +
hg19:Y:14079622-G-A hg38:Y:11958916-G-A YY+
hg19:Y:14174090-A-C hg38:Y:12053384-A-C FTB33072 YY+
hg19:Y:14185844-C-G hg38:Y:12065138-C-G YY+
hg19:Y:14301434-T-G hg38:Y:12180728-T-G FTB33111 YY+
hg19:Y:14514237-C-T hg38:Y:12402442-C-T Y+
hg19:Y:14688157-A-T hg38:Y:12576223-A-T Y+
hg19:Y:14923817-C-T hg38:Y:12811882-C-T YY+
hg19:Y:15622094-A-G hg38:Y:13510214-A-G YY+
hg19:Y:15665809-A-G hg38:Y:13553929-A-G YY+
hg19:Y:16245848-A-G hg38:Y:14133968-A-G FTB33476 Y+
hg19:Y:16288534-C-G hg38:Y:14176654-C-G FTB33484 YY+
hg19:Y:16437358-T-C hg38:Y:14325478-T-C YY+
hg19:Y:16890330-T-C hg38:Y:14778450-T-C FTB33588 YY+
hg19:Y:17475290-G-A hg38:Y:15363410-G-A YY+
hg19:Y:17696761-T-A hg38:Y:15584881-T-A YY+
hg19:Y:17804049-C-G hg38:Y:15692169-C-G FTB33768 YY+
hg19:Y:18193988-C-A hg38:Y:16082108-C-A FTB33838 YY+
hg19:Y:18652882-T-C hg38:Y:16541002-T-C Y+
hg19:Y:19021569-TA-T hg38:Y:16909689-TA-T +
hg19:Y:19156134-G-C hg38:Y:17044254-G-C FTB34003 YY+
hg19:Y:20045282-GAAA-G hg38:Y:17933402-GAAA-G P5_Prx +
hg19:Y:21040493-C-T hg38:Y:18878607-C-T FTB34118 Y+
hg19:Y:21607780-A-G hg38:Y:19445894-A-G YY+
hg19:Y:21920072-C-T hg38:Y:19758186-C-T Y+
hg19:Y:22032849-G-A hg38:Y:19870963-G-A YY+
hg19:Y:22229793-T-C hg38:Y:20067907-T-C DYZ19 +
hg19:Y:22281284-T-G hg38:Y:20119398-T-G DYZ19 +
hg19:Y:23053242-A-T hg38:Y:20891356-A-T YY+
hg19:Y:23097970-C-G hg38:Y:20936084-C-G FTB34463 YY+
hg19:Y:23190169-G-A hg38:Y:21028283-G-A Y+
hg19:Y:23526149-T-C hg38:Y:21364263-T-C YY+
hg19:Y:23583256-A-G hg38:Y:21421370-A-G FTB34572 YY+
hg19:Y:24475124-A-G hg38:Y:22328977-A-G FTB34646 Y+
hg19:Y:22610030-C-CT hg38:Y:20448144-C-CT 10×T*
hg38:Y:56835934-A-T *
hg19:Y:17994877-A-AC hg38:Y:15882997-A-AC P7_Prx *
hg38:Y:10664776-ATTCCAT-A,ATCCCAT *
hg38:Y:10664784-CCATT-C *
hg19:Y:18511118-A-T hg38:Y:16399238-A-T P6_Dst *
hg19:Y:26046101-C-T hg38:Y:23899954-C-T P1_Y1 *
hg19:Y:27916299-G-A hg38:Y:25770152-G-A P1_Y2 *
hg19:Y:22298161-T-C hg38:Y:20136275-T-C FTA27191 DYZ19 **
hg19:Y:20998300-CAAA-C hg38:Y:18836414-CAAA-C P4_Dst 28×A**
hg19:Y:19293770-CAAA-C hg38:Y:17181890-CAAA-C 29×A**
hg19:Y:21035211-TAAAC-T hg38:Y:18873325-TAAAC-T 4×AAAC**
hg19:Y:19839641-AAG-A hg38:Y:17727761-AAG-A P5_Prx **
hg19:Y:20084466-T-C hg38:Y:17972586-T-C BY212109 P5_Dst **
hg19:Y:25892207-ATGTG-A hg38:Y:23746060-ATGTG-A P1_Y1 11×TG**
hg19:Y:4826400-T-TTTTATATA hg38:Y:4958359-T-TTTTATATA 22×TA**
hg19:Y:5224708-A-G hg38:Y:5356667-A-G **
hg19:Y:6311532-T-G hg38:Y:6443491-T-G IR3_Dst **
hg19:Y:9731653-T-G hg38:Y:9894044-T-G IR3_Prx **
hg19:Y:13412543-C-T hg38:Y:11256867-C-T **
hg19:Y:16099087-C-CTCTG hg38:Y:13987207-C-CTCTG P8_Prx 23×TG**
hg19:Y:19671621-A-C hg38:Y:17559741-A-C P5_Prx **
hg19:Y:19814502-A-C hg38:Y:17702622-A-C P5_Prx **
hg19:Y:22272680-C-A hg38:Y:20110794-C-A FT454501 DYZ19 **
hg19:Y:22288831-G-C hg38:Y:20126945-G-C BY36891 DYZ19 **
hg19:Y:25509021-G-T hg38:Y:23362874-G-T P1_gr1 **
hg19:Y:28594904-G-A hg38:Y:26448757-G-A **
hg19:Y:19377427-G-A hg38:Y:17265547-G-A ***
hg19:Y:18743552-TTCTATCTATCTA-T hg38:Y:16631672-TTCTATCTATCTA-T 12×TCTA***
hg19:Y:17527438-G-GTATATA hg38:Y:15415558-G-GTATATA 18×TA***
hg19:Y:15832216-CTTTT-C hg38:Y:13720336-CTTTT-C 22×T***
hg19:Y:18982547-CAAAAAA-C hg38:Y:16870667-CAAAAAA-C 39×A***
hg19:Y:6699020-ATT-A,AT hg38:Y:6830979-ATT-A,AT 24×T***
hg19:Y:22458184-T-G hg38:Y:20296298-T-G DYZ19 ***
hg19:Y:2688622-ATTTTTTTTTTTTTTTT-A,ATTTTTT hg38:Y:2820581-ATTTTTTTTTTTTTTTT-A,ATTTTTT 29×T***
hg19:Y:6944963-AAAAAAAAAG-A hg38:Y:7076922-AAAAAAAAAG-A ***
hg19:Y:8044632-C-CA hg38:Y:8176591-C-CA ***
hg19:Y:8125042-AAGAAAGAA-A,AAGAGAGAAG hg38:Y:8257001-AAGAAAGAA-A,AAGAGAGAAG ***
hg19:Y:14565234-A-C hg38:Y:12453434-A-C ***
hg19:Y:14787784-A-T hg38:Y:12675854-A-T ***
hg19:Y:15477304-A-G hg38:Y:13365424-A-G ***
hg19:Y:17071103-AGAAA-A,AGAAG hg38:Y:14959223-AGAAA-A,AGAAG ***
hg19:Y:17085721-CTTT-C,CTT hg38:Y:14973841-CTTT-C,CTT 20×T***
hg19:Y:20989152-CACATATAT-C,CAT hg38:Y:18827266-CACATATAT-C,CAT P4_Dst ***
hg19:Y:22540571-T-TATATAC hg38:Y:20378685-T-TATATAC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: MI570521510678695170528396278
Used in age calculations1510678695170528396278
Counts of SNPs4837
Variant counts last updated 2025-11-30 02:46:40.



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