Hoy
BigY3: N112505, FTDNA: N112505, FGC: 97TRMMDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 N112505 | FTDNA N112505 | FGC 97TRM |
---|---|---|---|---|---|---|---|---|---|---|
16098533-C-G | 13986653-C-G | P8_Prx | 12×G | A* | ||||||
13687760-T-G | 11532084-T-G | A* | ||||||||
16098537-G-A | 13986657-G-A | P8_Prx | A* | |||||||
8430520-G-C | 8562479-G-C | FGC37616 | Y | Y | + | + | + | |||
8431900-G-T | 8563859-G-T | FGC37617 | Y | Y | + | + | + | |||
9059534-A-T | 9221925-A-T | FGC37618 | Y | + | + | + | ||||
15414885-G-T | 13303005-G-T | S679 | Y | Y | + | + | + | |||
16298229-C-T | 14186349-C-T | FGC37620 | Y | Y | + | + | + | |||
19483881-C-T | 17372001-C-T | FGC37622 | Y | + | + | + | ||||
21359331-C-G | 19197445-C-G | FGC37623 | Y | Y | + | + | + | |||
22440632-C-T | 20278746-C-T | FGC37624 | DYZ19 | + | + | |||||
10042813-T-C | 10205204-T-C | FGC37609 | + | |||||||
4657408-C-T | 4789367-C-T | FGC37608 | + | + | ||||||
3043149-G-A | 3175108-G-A | FGC37612 | + | |||||||
4169078-A-G | 4301037-A-G | FGC37613 | + | + | ||||||
4776188-T-C | 4908147-T-C | FGC37614 | + | + | ||||||
5452893-G-T | 5584852-G-T | FGC37615 | + | + | ||||||
10014783-C-T | 10177174-C-T | FGC37619 | Y | + | + | |||||
16709238-G-C | 14597358-G-C | FGC37621 | Y | + | ||||||
8218181-C-T | 8350140-C-T | Y | Y | * | ** | |||||
4043583-C-A | 4175542-C-A | * | ||||||||
17950825-AATATATATATATATATATATAT-A | 15838945-AATATATATATATATATATATAT-A | 27×AT | ** | ** | ||||||
3563017-A-G | 3694976-A-G | ** | ** | |||||||
13472279-G-A | 11316603-G-A | BY47624 | ** | |||||||
3785958-C-T | 3917917-C-T | ** | ||||||||
4227691-G-T | 4359650-G-T | ** | ||||||||
4255154-G-T | 4387113-G-T | ** | ||||||||
4782685-A-G | 4914644-A-G | ** | ||||||||
4782691-A-G | 4914650-A-G | ** | ||||||||
4914161-T-C | 5046120-T-C | ** | ||||||||
6011442-T-A | 6143401-T-A | ** | ||||||||
6591404-G-T | 6723363-G-T | ** | ||||||||
6721588-A-T | 6853547-A-T | ** | ||||||||
7443091-A-C | 7575050-A-C | ** | ||||||||
8062553-C-T | 8194512-C-T | ** | ||||||||
9431575-A-T | 9593966-A-T | ** | ||||||||
9721769-T-C | 9884160-T-C | IR3_Prx | ** | |||||||
13252668-G-T | 11096992-G-T | ** | ||||||||
13487509-A-G | 11331833-A-G | ** | ||||||||
14134984-G-A | 12014278-G-A | ** | ||||||||
14154407-A-G | 12033701-A-G | ** | ||||||||
15148779-G-A | 13036866-G-A | ** | ||||||||
15640271-T-A | 13528391-T-A | ** | ||||||||
15856953-C-T | 13745073-C-T | ** | ||||||||
15962980-T-G | 13851100-T-G | ** | ||||||||
17226573-A-C | 15114693-A-C | ** | ||||||||
17542633-G-T | 15430753-G-T | ** | ||||||||
19386570-A-G | 17274690-A-G | ** | ||||||||
21058742-G-A | 18896856-G-A | ** | ||||||||
21238886-C-A | 19077000-C-A | ** | ||||||||
21805155-T-C | 19643269-T-C | ** | ||||||||
21913740-T-C | 19751854-T-C | ** | ||||||||
21999749-T-C | 19837863-T-C | ** | ||||||||
22622629-A-G | 20460743-A-G | ** | ||||||||
23086819-T-C | 20924933-T-C | ** | ||||||||
4914193-TGAA-T | 5046152-TGAA-T | ** | ||||||||
8218181-CTCTT-C | 8350140-CTCTT-C | ** | *** | |||||||
13257287-ATATT-A | 11101611-ATATT-A | ** | ||||||||
19411914-A-AAAAGAAAGAAAGAAAG | 17300034-A-AAAAGAAAGAAAGAAAG | 14×AAAG | ** | |||||||
19630709-T-A | 17518829-T-A | P5_Prx | ** | |||||||
19669945-T-A | 17558065-T-A | P5_Prx | ** | |||||||
5180582-A-T | 5312541-A-T | ** | ||||||||
5180583-G-C | 5312542-G-C | ** | ||||||||
5180584-A-T | 5312543-A-T | ** | ||||||||
5275395-G-A | 5407354-G-A | ** | ||||||||
14606921-C-A | 12495123-C-A | ** | ||||||||
17454432-T-C | 15342552-T-C | ** | ||||||||
23029050-A-G | 20867164-A-G | ** | ||||||||
23029486-T-C | 20867600-T-C | ** | ||||||||
26015303-GC-G | 23869156-GC-G | P1_Y1 | ** | |||||||
26834853-AAAGG-A | 24688706-AAAGG-A | P1_g2 | 11×AAGG | *** | ||||||
58824981-A-C | 56765890-T-G | *** | ||||||||
21687985-CAGAGAG-C | 19526099-CAGAGAG-C | 19×AG | *** | |||||||
25955976-CTGTG-C | 23809829-CTGTG-C | P1_Y1 | 16×TG | *** | ||||||
22357834-C-A | 20195948-C-A | DYZ19 | *** | |||||||
13724052-G-T | 11568376-G-T | *** | ||||||||
25747106-G-A | 23600959-G-A | P1_b3 | *** | |||||||
20084465-C-T | 17972585-C-T | BY212108 | P5_Dst | *** | ||||||
58820272-C-T | 56770599-G-A | *** | ||||||||
22297717-A-T | 20135831-A-T | DYZ19 | *** | |||||||
22297705-A-G | 20135819-A-G | DYZ19 | *** | |||||||
22297684-T-A | 20135798-T-A | DYZ19 | *** | |||||||
58852260-C-G | 56738611-G-C | *** | ||||||||
22297702-TGAATGT-AGAGTGA | 20135816-TGAATGT-AGAGTGA | DYZ19 | *** | |||||||
58872916-T-C | 56717955-A-G | *** | ||||||||
22292760-A-T | 20130874-A-T | BY216346 | DYZ19 | *** | ||||||
22292779-C-T | 20130893-C-T | BY216348 | DYZ19 | *** | ||||||
22341704-G-T | 20179818-G-T | DYZ19 | *** | |||||||
22249121-G-T | 20087235-G-T | DYZ19 | *** | |||||||
22221464-G-T | 20059578-G-T | DYZ19 | *** | |||||||
22247112-A-T | 20085226-A-T | DYZ19 | *** | |||||||
22250353-T-A | 20088467-T-A | DYZ19 | *** | |||||||
22282949-A-G | 20121063-A-G | DYZ19 | *** | |||||||
22284355-A-T | 20122469-A-T | DYZ19 | *** | |||||||
22308147-G-C | 20146261-G-C | DYZ19 | *** | |||||||
25363877-C-T | 23217730-C-T | P2_r2 | *** | |||||||
24782876-A-G | 22636729-A-G | BY23044 | P3_b2 | *** | ||||||
13223482-G-A | 11067806-G-A | *** | ||||||||
28577852-A-G | 26431705-A-G | *** | ||||||||
59001389-AAAG-A | 56855242-AAAG-A | *** | ||||||||
9295791-C-A | 9458182-C-A | *** | ||||||||
15932081-G-A | 13820201-G-A | *** | ||||||||
22292789-C-G | 20130903-C-G | DYZ19 | *** | |||||||
13488762-CCACC-TCACT | 11333086-CCACC-TCACT | *** | ||||||||
13488775-CCTCC-GCTCA | 11333099-CCTCC-GCTCA | *** | ||||||||
22264032-GT-G | 20102146-GT-G | DYZ19 | *** | |||||||
13724179-TG-AC | 11568503-TG-AC | *** | ||||||||
28117258-G-T | 25971111-G-T | P1_b4 | *** | |||||||
25466376-T-G | 23320229-T-G | P2_r2 | *** | |||||||
13489671-T-C | 11333995-T-C | *** | ||||||||
28117202-A-T | 25971055-A-T | P1_b4 | *** | |||||||
13737661-A-T | 11581985-A-T | *** | ||||||||
22297714-T-C | 20135828-T-C | DYZ19 | *** | |||||||
22297708-T-A | 20135822-T-A | DYZ19 | *** | |||||||
22297702-T-A | 20135816-T-A | DYZ19 | *** | |||||||
13223014-A-G | 11067338-A-G | *** | ||||||||
13616422-C-T | 11460746-C-T | *** | ||||||||
14631127-G-A | 12519196-G-A | *** | ||||||||
22297098-T-A | 20135212-T-A | DYZ19 | *** | |||||||
22292827-A-G | 20130941-A-G | DYZ19 | *** | |||||||
2677886-G-T | 2809845-G-T | *** | ||||||||
2678800-T-C | 2810759-T-C | *** | ||||||||
2803343-A-G | 2935302-A-G | *** | ||||||||
2810407-C-T | 2942366-C-T | *** | ||||||||
3128453-C-A | 3260412-C-A | *** | ||||||||
3459060-T-C | 3591019-T-C | *** | ||||||||
3459410-C-A | 3591369-C-A | *** | ||||||||
4019791-A-T | 4151750-A-T | *** | ||||||||
4019814-C-A | 4151773-C-A | *** | ||||||||
4431082-A-T | 4563041-A-T | *** | ||||||||
4740177-G-A | 4872136-G-A | *** | ||||||||
5065182-G-T | 5197141-G-T | *** | ||||||||
5570333-T-C | 5702292-T-C | *** | ||||||||
5701651-A-G | 5833610-A-G | *** | ||||||||
5813749-C-T | 5945708-C-T | *** | ||||||||
5813764-C-T | 5945723-C-T | *** | ||||||||
6151681-C-A | 6283640-C-A | IR3_Dst | *** | |||||||
6495261-A-G | 6627220-A-G | *** | ||||||||
6622886-T-A | 6754845-T-A | *** | ||||||||
6750948-G-A | 6882907-G-A | *** | ||||||||
6750950-C-A | 6882909-C-A | *** | ||||||||
6750962-T-C | 6882921-T-C | *** | ||||||||
6750963-G-A | 6882922-G-A | *** | ||||||||
6750990-A-G | 6882949-A-G | *** | ||||||||
6750996-A-G | 6882955-A-G | *** | ||||||||
7061915-T-A | 7193874-T-A | *** | ||||||||
7121415-G-A | 7253374-G-A | *** | ||||||||
7121472-C-G | 7253431-C-G | *** | ||||||||
7277085-C-A | 7409044-C-A | *** | ||||||||
7373303-G-T | 7505262-G-T | *** | ||||||||
7394014-G-C | 7525973-G-C | *** | ||||||||
7443652-A-C | 7575611-A-C | *** | ||||||||
7573239-C-A | 7705198-C-A | *** | ||||||||
8062963-A-G | 8194922-A-G | *** | ||||||||
8137063-G-A | 8269022-G-A | *** | ||||||||
8218185-T-C | 8350144-T-C | *** | ||||||||
8972292-T-C | 9134683-T-C | *** | ||||||||
9200092-G-T | 9362483-G-T | *** | ||||||||
9224819-C-A | 9387210-C-A | *** | ||||||||
9230860-A-G | 9393251-A-G | *** | ||||||||
9324119-G-A | 9486510-G-A | *** | ||||||||
9374333-T-C | 9536724-T-C | *** | ||||||||
9540132-T-G | 9702523-T-G | IR3_Prx | *** | |||||||
9556871-A-G | 9719262-A-G | IR3_Prx | *** | |||||||
9592327-G-T | 9754718-G-T | IR3_Prx | *** | |||||||
9592368-G-T | 9754759-G-T | IR3_Prx | *** | |||||||
9677390-A-C | 9839781-A-C | IR3_Prx | *** | |||||||
9947873-C-T | 10110264-C-T | *** | ||||||||
10015026-C-A | 10177417-C-A | *** | ||||||||
10033416-G-T | 10195807-G-T | *** | ||||||||
10041578-G-A | 10203969-G-A | *** | ||||||||
10103037-T-A | 10265428-T-A | *** | ||||||||
13115007-G-T | 10604493-G-T | *** | ||||||||
13121324-T-G | 10610810-T-G | *** | ||||||||
13201948-G-A | 11046272-G-A | *** | ||||||||
13222083-A-G | 11066407-A-G | *** | ||||||||
13223252-A-G | 11067576-A-G | *** | ||||||||
13253273-G-T | 11097597-G-T | *** | ||||||||
13312285-C-A | 11156609-C-A | *** | ||||||||
13460934-G-A | 11305258-G-A | *** | ||||||||
13460960-G-T | 11305284-G-T | *** | ||||||||
13465778-C-T | 11310102-C-T | *** | ||||||||
13471838-A-T | 11316162-A-T | *** | ||||||||
13488817-G-A | 11333141-G-A | *** | ||||||||
13488903-T-A | 11333227-T-A | *** | ||||||||
13606785-C-A | 11451109-C-A | *** | ||||||||
13733644-T-A | 11577968-T-A | *** | ||||||||
13740852-T-G | 11585176-T-G | *** | ||||||||
13878099-A-T | 11757393-A-T | *** | ||||||||
13981235-T-C | 11860529-T-C | *** | ||||||||
14113232-C-T | 11992526-C-T | *** | ||||||||
14131393-T-C | 12010687-T-C | *** | ||||||||
14155781-G-T | 12035075-G-T | *** | ||||||||
14180969-T-A | 12060263-T-A | *** | ||||||||
14181054-G-T | 12060348-G-T | *** | ||||||||
14247181-A-T | 12126475-A-T | *** | ||||||||
14390975-T-A | 12270271-T-A | *** | ||||||||
14441088-G-T | 12320361-G-T | *** | ||||||||
14683572-C-T | 12571638-C-T | *** | ||||||||
14703662-A-G | 12591728-A-G | *** | ||||||||
15117026-T-A | 13005113-T-A | *** | ||||||||
15150461-A-C | 13038548-A-C | *** | ||||||||
15245183-T-C | 13133269-T-C | *** | ||||||||
15245213-A-G | 13133299-A-G | *** | ||||||||
15296286-T-C | 13184385-T-C | *** | ||||||||
15297088-A-C | 13185187-A-C | *** | ||||||||
15676501-C-T | 13564621-C-T | *** | ||||||||
15804240-A-G | 13692360-A-G | *** | ||||||||
15952709-C-T | 13840829-C-T | *** | ||||||||
16069449-C-A | 13957569-C-A | *** | ||||||||
16105661-C-G | 13993781-C-G | P8_Prx | *** | |||||||
16135521-A-G | 14023641-A-G | P8_Dst | *** | |||||||
16161361-C-T | 14049481-C-T | P8_Dst | *** | |||||||
16210666-T-A | 14098786-T-A | *** | ||||||||
16498310-G-T | 14386430-G-T | *** | ||||||||
16685070-C-A | 14573190-C-A | *** | ||||||||
16978694-G-T | 14866814-G-T | *** | ||||||||
17067610-G-A | 14955730-G-A | *** | ||||||||
17228047-G-T | 15116167-G-T | *** | ||||||||
17268365-A-T | 15156485-A-T | *** | ||||||||
17700771-T-C | 15588891-T-C | *** | ||||||||
17998305-A-G | 15886425-A-G | P7_Gap | *** | |||||||
18001790-G-T | 15889910-G-T | P7_Gap | *** | |||||||
18317073-G-T | 16205193-G-T | P6_Prx | *** | |||||||
18318092-C-T | 16206212-C-T | P6_Prx | *** | |||||||
18344261-A-T | 16232381-A-T | P6_Prx | *** | |||||||
18352965-G-C | 16241085-G-C | P6_Prx | *** | |||||||
18480506-G-T | 16368626-G-T | P6_Dst | *** | |||||||
19097688-C-T | 16985808-C-T | *** | ||||||||
19138460-G-T | 17026580-G-T | *** | ||||||||
19176157-G-A | 17064277-G-A | *** | ||||||||
19304447-A-G | 17192567-A-G | *** | ||||||||
19352963-T-C | 17241083-T-C | *** | ||||||||
19583960-T-C | 17472080-T-C | P5_Prx | *** | |||||||
19611257-G-T | 17499377-G-T | P5_Prx | *** | |||||||
19663764-T-G | 17551884-T-G | P5_Prx | *** | |||||||
19720355-T-A | 17608475-T-A | P5_Prx | *** | |||||||
19753614-C-A | 17641734-C-A | P5_Prx | *** | |||||||
19753620-A-C | 17641740-A-C | P5_Prx | *** | |||||||
19753627-G-A | 17641747-G-A | P5_Prx | *** | |||||||
19755243-C-A | 17643363-C-A | P5_Prx | *** | |||||||
19771692-A-G | 17659812-A-G | P5_Prx | *** | |||||||
19853447-G-C | 17741567-G-C | P5_Prx | *** | |||||||
19853523-C-A | 17741643-C-A | P5_Prx | *** | |||||||
20025319-A-G | 17913439-A-G | P5_Prx | *** | |||||||
20084583-G-T | 17972703-G-T | P5_Dst | *** | |||||||
20084592-A-T | 17972712-A-T | P5_Dst | *** | |||||||
20084607-G-T | 17972727-G-T | P5_Dst | *** | |||||||
20084639-A-T | 17972759-A-T | P5_Dst | *** | |||||||
20084727-G-T | 17972847-G-T | P5_Dst | *** | |||||||
20131352-A-C | 18019472-A-C | P5_Dst | *** | |||||||
20243244-G-A | 18081358-G-A | P5_Dst | *** | |||||||
20358902-A-G | 18197016-A-G | P5_Dst | *** | |||||||
20377708-T-A | 18215822-T-A | P5_Dst | *** | |||||||
20426098-T-G | 18264212-T-G | P5_Dst | *** | |||||||
20426120-C-A | 18264234-C-A | P5_Dst | *** | |||||||
20426330-T-G | 18264444-T-G | P5_Dst | *** | |||||||
20438748-G-A | 18276862-G-A | P5_Dst | *** | |||||||
20438866-C-T | 18276980-C-T | P5_Dst | *** | |||||||
20472540-G-T | 18310654-G-T | P5_Dst | *** | |||||||
20534225-G-A | 18372339-G-A | P5_Dst | *** | |||||||
20534497-G-T | 18372611-G-T | P5_Dst | *** | |||||||
20615415-C-G | 18453529-C-G | P4_Prx | *** | |||||||
20618059-G-T | 18456173-G-T | P4_Prx | *** | |||||||
20632629-T-A | 18470743-T-A | P4_Prx | *** | |||||||
20645880-A-T | 18483994-A-T | P4_Prx | *** | |||||||
20697716-T-G | 18535830-T-G | P4_Prx | *** | |||||||
20747911-A-C | 18586025-A-C | P4_Prx | *** | |||||||
20752808-G-A | 18590922-G-A | P4_Prx | *** | |||||||
20873664-A-T | 18711778-A-T | P4_Dst | *** | |||||||
20943241-A-G | 18781355-A-G | P4_Dst | *** | |||||||
20949849-G-A | 18787963-G-A | P4_Dst | *** | |||||||
20998284-G-A | 18836398-G-A | P4_Dst | *** | |||||||
21197049-C-A | 19035163-C-A | *** | ||||||||
21198789-A-G | 19036903-A-G | *** | ||||||||
21273636-G-A | 19111750-G-A | *** | ||||||||
21377051-T-A | 19215165-T-A | *** | ||||||||
21448885-T-C | 19286999-T-C | *** | ||||||||
21474835-T-C | 19312949-T-C | *** | ||||||||
21829908-C-A | 19668022-C-A | *** | ||||||||
21996786-T-G | 19834900-T-G | *** | ||||||||
21997087-T-A | 19835201-T-A | *** | ||||||||
22197772-T-C | 20035886-T-C | *** | ||||||||
22227878-T-C | 20065992-T-C | DYZ19 | *** | |||||||
22227894-C-T | 20066008-C-T | DYZ19 | *** | |||||||
22234913-C-A | 20073027-C-A | DYZ19 | *** | |||||||
22268193-G-T | 20106307-G-T | DYZ19 | *** | |||||||
22268222-A-T | 20106336-A-T | DYZ19 | *** | |||||||
22292750-A-G | 20130864-A-G | DYZ19 | *** | |||||||
22292751-A-T | 20130865-A-T | DYZ19 | *** | |||||||
22292755-T-C | 20130869-T-C | DYZ19 | *** | |||||||
22292761-T-C | 20130875-T-C | DYZ19 | *** | |||||||
22292817-C-T | 20130931-C-T | DYZ19 | *** | |||||||
22311230-C-A | 20149344-C-A | DYZ19 | *** | |||||||
22311235-T-C | 20149349-T-C | DYZ19 | *** | |||||||
22322286-A-T | 20160400-A-T | DYZ19 | *** | |||||||
22324657-T-C | 20162771-T-C | DYZ19 | *** | |||||||
22327773-T-A | 20165887-T-A | DYZ19 | *** | |||||||
22327804-G-T | 20165918-G-T | DYZ19 | *** | |||||||
22327807-T-A | 20165921-T-A | DYZ19 | *** | |||||||
22327866-T-C | 20165980-T-C | DYZ19 | *** | |||||||
22347798-A-T | 20185912-A-T | DYZ19 | *** | |||||||
22352662-G-T | 20190776-G-T | DYZ19 | *** | |||||||
22357697-T-C | 20195811-T-C | DYZ19 | *** | |||||||
22358209-G-T | 20196323-G-T | DYZ19 | *** | |||||||
22358359-C-T | 20196473-C-T | DYZ19 | *** | |||||||
22358366-G-C | 20196480-G-C | DYZ19 | *** | |||||||
22361404-C-A | 20199518-C-A | DYZ19 | *** | |||||||
22361419-C-T | 20199533-C-T | DYZ19 | *** | |||||||
22364438-G-T | 20202552-G-T | DYZ19 | *** | |||||||
22366089-C-A | 20204203-C-A | DYZ19 | *** | |||||||
22450545-T-A | 20288659-T-A | DYZ19 | *** | |||||||
22481567-T-A | 20319681-T-A | DYZ19 | *** | |||||||
22481581-A-G | 20319695-A-G | DYZ19 | *** | |||||||
22481608-T-G | 20319722-T-G | DYZ19 | *** | |||||||
22481621-T-A | 20319735-T-A | DYZ19 | *** | |||||||
22482800-T-A | 20320914-T-A | DYZ19 | *** | |||||||
22502297-T-A | 20340411-T-A | DYZ19 | *** | |||||||
22644591-A-G | 20482705-A-G | *** | ||||||||
23004501-G-C | 20842615-G-C | *** | ||||||||
23084680-C-T | 20922794-C-T | *** | ||||||||
23172004-T-C | 21010118-T-C | *** | ||||||||
23332607-A-G | 21170721-A-G | *** | ||||||||
23332611-A-C | 21170725-A-C | *** | ||||||||
23332646-C-T | 21170760-C-T | *** | ||||||||
24013562-A-T | 21867415-A-T | *** | ||||||||
24109966-G-A | 21963819-G-A | P3_b1 | *** | |||||||
24113319-T-C | 21967172-T-C | P3_b1 | *** | |||||||
24143039-A-G | 21996892-A-G | P3_b1 | *** | |||||||
24157969-A-G | 22011822-A-G | P3_b1 | *** | |||||||
24209885-G-A | 22063738-G-A | P3_b1 | *** | |||||||
24232042-A-C | 22085895-A-C | P3_b1 | *** | |||||||
24283307-G-T | 22137160-G-T | P3_t1 | *** | |||||||
24339186-G-T | 22193039-G-T | P3_t1 | *** | |||||||
24552174-C-T | 22406027-C-T | P3_t2 | *** | |||||||
24621217-G-T | 22475070-G-T | P3_t2 | *** | |||||||
24646720-A-C | 22500573-A-C | P3_b2 | *** | |||||||
24661839-C-T | 22515692-C-T | P3_b2 | *** | |||||||
24862204-T-A | 22716057-T-A | IR1_R | *** | |||||||
24862229-C-A | 22716082-C-A | IR1_R | *** | |||||||
24924117-A-T | 22777970-A-T | g1 | *** | |||||||
24935648-C-T | 22789501-C-T | g1 | *** | |||||||
24954722-C-A | 22808575-C-A | g1 | *** | |||||||
24971623-C-A | 22825476-C-A | g1 | *** | |||||||
25157817-C-T | 23011670-C-T | g1 | *** | |||||||
25161500-G-T | 23015353-G-T | g1 | *** | |||||||
25207511-T-A | 23061364-T-A | P2_r1 | *** | |||||||
25207525-C-A | 23061378-C-A | P2_r1 | *** | |||||||
25207544-C-A | 23061397-C-A | P2_r1 | *** | |||||||
25207610-T-A | 23061463-T-A | P2_r1 | *** | |||||||
25207654-T-A | 23061507-T-A | P2_r1 | *** | |||||||
25207659-T-G | 23061512-T-G | P2_r1 | *** | |||||||
25231808-T-C | 23085661-T-C | P2_r1 | *** | |||||||
25231917-A-G | 23085770-A-G | P2_r1 | *** | |||||||
25246723-A-C | 23100576-A-C | P2_r1 | *** | |||||||
25287895-G-A | 23141748-G-A | P2_r1 | *** | |||||||
25310499-G-A | 23164352-G-A | P2_r1 | *** | |||||||
25456371-C-A | 23310224-C-A | P2_r2 | *** | |||||||
25505774-G-T | 23359627-G-T | P1_gr1 | *** | |||||||
25520369-T-G | 23374222-T-G | P1_gr1 | *** | |||||||
25525980-G-T | 23379833-G-T | P1_gr1 | *** | |||||||
25526043-T-G | 23379896-T-G | P1_gr1 | *** | |||||||
25626257-G-C | 23480110-G-C | P1_b3 | *** | |||||||
25626278-C-A | 23480131-C-A | P1_b3 | *** | |||||||
25628603-C-A | 23482456-C-A | P1_b3 | *** | |||||||
25709904-G-T | 23563757-G-T | P1_b3 | *** | |||||||
25717339-T-A | 23571192-T-A | P1_b3 | *** | |||||||
25732469-G-T | 23586322-G-T | P1_b3 | *** | |||||||
25737732-G-A | 23591585-G-A | P1_b3 | *** | |||||||
25839166-G-T | 23693019-G-T | P1_b3 | *** | |||||||
25848847-T-A | 23702700-T-A | P1_Y1 | *** | |||||||
25849791-T-G | 23703644-T-G | P1_Y1 | *** | |||||||
26101242-G-T | 23955095-G-T | P1_Y1 | *** | |||||||
26101337-T-A | 23955190-T-A | P1_Y1 | *** | |||||||
26110912-T-C | 23964765-T-C | P1_Y1 | *** | |||||||
26120035-G-A | 23973888-G-A | P1_Y1 | *** | |||||||
26228746-A-T | 24082599-A-T | P1_Y1 | *** | |||||||
26228780-G-T | 24082633-G-T | P1_Y1 | *** | |||||||
26312513-C-A | 24166366-C-A | P1_Y1 | *** | |||||||
26326757-C-T | 24180610-C-T | P1_Y1 | *** | |||||||
26376712-A-T | 24230565-A-T | P1_Y1 | *** | |||||||
26421963-A-G | 24275816-A-G | P1_Y1 | *** | |||||||
26421988-T-G | 24275841-T-G | P1_Y1 | *** | |||||||
26422041-A-G | 24275894-A-G | P1_Y1 | *** | |||||||
26463558-G-T | 24317411-G-T | P1_Y1 | *** | |||||||
26495996-C-G | 24349849-C-G | P1_Y1 | *** | |||||||
26517735-A-G | 24371588-A-G | P1_Y1 | *** | |||||||
26660049-A-C | 24513902-A-C | P1_g2 | *** | |||||||
26702911-T-A | 24556764-T-A | P1_g2 | *** | |||||||
26810585-C-T | 24664438-C-T | P1_g2 | *** | |||||||
26948489-C-A | 24802342-C-A | P1_r3 | *** | |||||||
26948634-G-A | 24802487-G-A | P1_r3 | *** | |||||||
26992940-G-T | 24846793-G-T | P1_r4 | *** | |||||||
27060137-G-T | 24913990-G-T | P1_r4 | *** | |||||||
27181561-G-A | 25035414-G-A | P1_g3 | *** | |||||||
27222196-C-A | 25076049-C-A | P1_g3 | *** | |||||||
27288727-G-A | 25142580-G-A | P1_g3 | *** | |||||||
27483196-C-A | 25337049-C-A | P1_Y2 | *** | |||||||
27483300-T-A | 25337153-T-A | P1_Y2 | *** | |||||||
27499071-G-T | 25352924-G-T | P1_Y2 | *** | |||||||
27504043-T-C | 25357896-T-C | P1_Y2 | *** | |||||||
27583032-A-T | 25436885-A-T | P1_Y2 | *** | |||||||
27608901-G-T | 25462754-G-T | P1_Y2 | *** | |||||||
27610099-T-G | 25463952-T-G | P1_Y2 | *** | |||||||
27651569-G-A | 25505422-G-A | P1_Y2 | *** | |||||||
27651586-C-A | 25505439-C-A | P1_Y2 | *** | |||||||
27651659-G-A | 25505512-G-A | P1_Y2 | *** | |||||||
27826758-T-G | 25680611-T-G | P1_Y2 | *** | |||||||
27862085-A-C | 25715938-A-C | P1_Y2 | *** | |||||||
27915825-G-A | 25769678-G-A | P1_Y2 | *** | |||||||
27915904-T-G | 25769757-T-G | P1_Y2 | *** | |||||||
28008008-C-A | 25861861-C-A | P1_Y2 | *** | |||||||
28025169-G-A | 25879022-G-A | P1_Y2 | 11×A | *** | ||||||
28117261-G-T | 25971114-G-T | P1_b4 | *** | |||||||
28206822-A-G | 26060675-A-G | P1_b4 | *** | |||||||
28306524-C-T | 26160377-C-T | P1_b4 | *** | |||||||
28336662-C-A | 26190515-C-A | P1_b4 | *** | |||||||
28486604-T-C | 26340457-T-C | *** | ||||||||
28489824-G-A | 26343677-G-A | *** | ||||||||
28602211-G-T | 26456064-G-T | *** | ||||||||
58823281-C-G | 56767590-G-C | *** | ||||||||
58823715-C-G | 56767156-G-C | *** | ||||||||
58824988-A-T | 56765883-T-A | *** | ||||||||
58825017-T-C | 56765854-A-G | *** | ||||||||
58837572-C-T | 56753299-G-A | *** | ||||||||
58837627-T-C | 56753244-A-G | *** | ||||||||
58837731-A-G | 56753140-T-C | *** | ||||||||
58837757-T-A | 56753114-A-T | *** | ||||||||
58837761-C-T | 56753110-G-A | *** | ||||||||
58837820-T-C | 56753051-A-G | *** | ||||||||
58846800-C-A | 56744071-G-T | *** | ||||||||
58846896-A-T | 56743975-T-A | *** | ||||||||
58854578-G-T | 56736293-C-A | *** | ||||||||
58855789-A-T | 56735082-T-A | *** | ||||||||
58869353-T-C | 56721518-A-G | *** | ||||||||
58885971-C-A | 56704900-G-T | *** | ||||||||
58891017-A-G | 56699854-T-C | *** | ||||||||
58892984-G-A | 56697887-C-T | *** | ||||||||
58894677-G-T | 56696194-C-A | *** | ||||||||
58898724-G-T | 56692147-C-A | *** | ||||||||
58903390-T-C | 56687481-A-G | *** | ||||||||
58903452-T-C | 56687419-A-G | *** | ||||||||
58903471-C-G | 56687400-G-C | *** | ||||||||
58913720-G-T | 56677151-C-A | *** | ||||||||
28237962-AG-A | 26091815-AG-A | P1_b4 | *** | |||||||
22341375-GT-TC | 20179489-GT-TC | DYZ19 | *** | |||||||
16978999-GA-G | 14867119-GA-G | 14×A | *** | |||||||
2915036-TTCCTTC-T | 3046995-TTCCTTC-T | *** | ||||||||
3311775-G-GC | 3443734-G-GC | *** | ||||||||
3571635-C-CA | 3703594-C-CA | *** | ||||||||
3641037-C-CTTTCT | 3772996-C-CTTTCT | *** | ||||||||
3679700-A-AAATC | 3811659-A-AAATC | *** | ||||||||
4382449-CAAAA-C | 4514408-CAAAA-C | 17×A | *** | |||||||
4636107-ATAT-A | 4768066-ATAT-A | *** | ||||||||
5240978-C-CCCTT | 5372937-C-CCCTT | 5×CTTT | *** | |||||||
5937208-A-ATCTC | 6069167-A-ATCTC | 17×TC | *** | |||||||
5937244-ATATA-CTC | 6069203-ATATA-CTC | *** | ||||||||
6127674-GTCT-G | 6259633-GTCT-G | *** | ||||||||
6226090-T-TCTTC | 6358049-T-TCTTC | IR3_Dst | *** | |||||||
6750948-GCC-ACA | 6882907-GCC-ACA | *** | ||||||||
6750962-TG-CA | 6882921-TG-CA | *** | ||||||||
7312578-AAGGGAGGGAGGGGAGAAGGG-A | 7444537-AAGGGAGGGAGGGGAGAAGGG-A | *** | ||||||||
7394141-GTA-TTC | 7526100-GTA-TTC | *** | ||||||||
8218181-CTCTT-TTCTC | 8350140-CTCTT-TTCTC | *** | ||||||||
8690237-T-TTG | 8822196-T-TTG | *** | ||||||||
8814916-CT-C | 8946875-CT-C | 8×T | *** | |||||||
9398651-A-AT | 9561042-A-AT | *** | ||||||||
13142948-G-GCATTCCATTC | 10632434-G-GCATTCCATTC | 11×CATTC | *** | |||||||
13205597-TAT-AAA | 11049921-TAT-AAA | *** | ||||||||
13454807-T-TACTCC | 11299131-T-TACTCC | *** | ||||||||
13454813-A-ATTCCC | 11299137-A-ATTCCC | *** | ||||||||
13456020-A-ATTCCT | 11300344-A-ATTCCT | *** | ||||||||
13456025-A-ATTCCT | 11300349-A-ATTCCT | *** | ||||||||
13461141-CTAG-TTAT | 11305465-CTAG-TTAT | *** | ||||||||
13461179-GATACA-CATATC | 11305503-GATACA-CATATC | *** | ||||||||
13461206-GGCC-AGCG | 11305530-GGCC-AGCG | *** | ||||||||
13471806-AC-GT | 11316130-AC-GT | *** | ||||||||
13471838-ATACT-TTGCC | 11316162-ATACT-TTGCC | *** | ||||||||
13485554-GTGG-ATGT | 11329878-GTGG-ATGT | *** | ||||||||
13488814-CCGGACCCG-TGGAACACA | 11333138-CCGGACCCG-TGGAACACA | *** | ||||||||
13489363-CTTCTCCCC-GTTCCACT | 11333687-CTTCTCCCC-GTTCCACT | *** | ||||||||
13616426-GT-ATA | 11460750-GT-ATA | *** | ||||||||
13724151-ACC-TCG | 11568475-ACC-TCG | *** | ||||||||
13838166-G-GGAAAT | 11717460-G-GGAAAT | *** | ||||||||
13838180-T-TGGAAG | 11717474-T-TGGAAG | *** | ||||||||
13840824-T-TGGAAA | 11720118-T-TGGAAA | *** | ||||||||
14610898-T-TACAA | 12499104-T-TACAA | *** | ||||||||
14645425-GTTTTT-G | 12533489-GTTTTT-G | *** | ||||||||
14937873-C-CTTTTCTTTTG | 12825948-C-CTTTTCTTTTG | *** | ||||||||
15799163-CCTT-C | 13687283-CCTT-C | *** | ||||||||
16838966-G-GAAAT | 14727086-G-GAAAT | *** | ||||||||
16868741-TTATACATA-T | 14756861-TTATACATA-T | *** | ||||||||
17275760-A-AGGGAC | 15163880-A-AGGGAC | *** | ||||||||
17707375-TCAAAA-T | 15595495-TCAAAA-T | *** | ||||||||
17802165-GTAAAAAAA-G | 15690285-GTAAAAAAA-G | *** | ||||||||
18147537-T-TGG | 16035657-T-TGG | *** | ||||||||
19753632-ACATG-CCATC | 17641752-ACATG-CCATC | P5_Prx | *** | |||||||
20426351-CA-C | 18264465-CA-C | P5_Dst | 19×A | *** | ||||||
21665724-T-TAAAC | 19503838-T-TAAAC | *** | ||||||||
22099673-T-TTATTAG | 19937787-T-TTATTAG | *** | ||||||||
22268168-AGT-TAC | 20106282-AGT-TAC | DYZ19 | *** | |||||||
22268200-GG-TA | 20106314-GG-TA | DYZ19 | *** | |||||||
22292750-AAGTCT-GTGTCC | 20130864-AAGTCT-GTGTCC | DYZ19 | *** | |||||||
22292760-AT-TC | 20130874-AT-TC | DYZ19 | *** | |||||||
22292824-TGAA-AGGG | 20130938-TGAA-AGGG | DYZ19 | *** | |||||||
22299275-C-CA | 20137389-C-CA | DYZ19 | *** | |||||||
22311258-AT-CC | 20149372-AT-CC | DYZ19 | *** | |||||||
22327804-GTGT-TTGA | 20165918-GTGT-TTGA | DYZ19 | *** | |||||||
22341394-A-GT | 20179508-A-GT | DYZ19 | *** | |||||||
22357675-TTCG-ATCA | 20195789-TTCG-ATCA | DYZ19 | *** | |||||||
23018099-GT-G | 20856213-GT-G | *** | ||||||||
23316015-A-ACTTT | 21154129-A-ACTTT | *** | ||||||||
23435181-G-TT | 21273295-G-TT | 20×T | *** | |||||||
25605740-CA-C | 23459593-CA-C | P1_gr1 | 15×A | *** | ||||||
58823281-CCATCT-GCATTC | 56767585-AGATGG-GAATGC | *** | ||||||||
58837757-TATTC-AATTT | 56753110-GAATA-AAATT | *** | ||||||||
58862655-GTTAC-ATTAT | 56728212-GTAAC-ATAAT | *** | ||||||||
58876658-AC-CT | 56714212-GT-AG | *** | ||||||||
58881574-GTCCATTCCATTCCATTACAGTCCATTCCAATCCCTTCCATTCCTTTGCCTTCCATTCGAA-G | 56709224-AGAATGGAATGGATTCGAATGGAAGGCAAAGGAATGGAAGGGATTGGAATGGACTGTAATG-A | *** | ||||||||
58903484-GTCCATTCCAT-G | 56687372-CTGGAATGGAA-C | *** | ||||||||
58906053-TT-CC | 56684817-AA-GG | *** | ||||||||
58916176-TGAGTCCATTCCAT-CGAG | 56674682-ATGGAATGGACTCA-CTCG | *** | ||||||||
13476610-C-T | 11320934-C-T | *** | ||||||||
2960062-CAAA-C,CAA | 3092021-CAAA-C,CAA | 17×A | *** | |||||||
4539033-TA-T,TAA | 4670992-TA-T,TAA | 24×A | *** | |||||||
19146569-CTTTTT-C,CTTTT | 17034689-CTTTTT-C,CTTTT | 28×T | *** | |||||||
4471003-CTTTT-C,CTTT | 4602962-CTTTT-C,CTTT | 29×T | *** | |||||||
5218438-T-G | 5350397-T-G | *** | ||||||||
5219109-T-C | 5351068-T-C | *** | ||||||||
6114306-G-C | 6246265-G-C | *** | ||||||||
14858666-ATTT-A,ATT | 12746732-ATTT-A,ATT | 19×T | *** | |||||||
20489632-T-C | 18327746-T-C | P5_Dst | *** | |||||||
21599510-A-G | 19437624-A-G | *** | ||||||||
27527396-T-C | 25381249-T-C | P1_Y2 | *** | |||||||
28620558-C-CAA | 26474411-C-CAA | 16×A | *** | |||||||
56871649-TATGAGA-T,TATG | *** | |||||||||
19049-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.