Connolly

FTDNA: N124160, BigY2: N124160

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > FGC11134 > FGC12055 > A353 > Z3026 > Z16250 > A114 > CTS4466/S1136 > S1115 > Z3023 > FGC84010 > A541 > Z21065 > BY19775 > A956 > A2288 > A5312

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N124160		BigY2
N124160
7725529-C-T 7857488-C-T BY67134 YY++
8550411-C-T 8682370-C-T BY73935 YY++
15310023-G-T 13198128-G-T BY100737 YY++
17301651-G-C 15189771-G-C BY113627 YY++
17527912-C-T 15416032-C-T BY115467 YY++
23090357-C-T 20928471-C-T BY142912 YY++
27356431-C-G 25210284-C-G P1_g3 +
5828894-G-T 5960853-G-T ****
15158740-A-G 13046826-A-G CTS3762 Z2766 ****
18455834-G-GTC 16343954-G-GTC P6_Dst **
10018241-A-G 10180632-A-G **
2775393-T-G 2907352-T-G ****
7252440-C-A 7384399-C-A ****
13469603-G-T 11313927-G-T *****
17538139-C-A 15426259-C-A CTS7558 ****
28819333-T-G 26673186-T-G **
20876318-AT-A 18714432-AT-A P4_Dst **
2996639-GAC-G 3128598-GAC-G 10×AC**
13202548-A-C 11046872-A-C **
17218299-TC-T 15106419-TC-T **
17737618-C-A 15625738-C-A 14×A**
18707782-GTA-G 16595902-GTA-G **
23415308-GTATGTA-G 21253422-GTATGTA-G **
24910853-C-CATATATAT 22764706-C-CATATATAT g1 26×AT**
14780909-C-A 12668979-C-A **
21322447-G-A 19160561-G-A FT144240 **
23807473-G-T 21645587-G-T **
26260636-A-AT 24114489-A-AT P1_Y1 11×T**
13857398-C-A 11736692-C-A DYZ17 **
27733697-C-A 25587550-C-A P1_Y2 **
6699020-A-T 6830979-A-T 24×T**
21464536-CAAAA-C 19302650-CAAAA-C 19×A**
15138012-CTTTTT-C 13026099-CTTTTT-C 15×T**
13461071-T-C 11305395-T-C **
6831285-C-A 6963244-C-A **
3790878-GTATATATATA-G 3922837-GTATATATATA-G 21×TA**
7131386-ACCC-A 7263345-ACCC-A 14×C**
22429428-A-T 20267542-A-T DYZ19 **
23285323-C-A 21123437-C-A **
13710846-C-GGAATA 11555170-C-GGAATA DYZ17 **
23807408-G-A 21645522-G-A **
11033137-G-GCATTC **
10797946-T-C **
10797984-C-A **
10797994-C-G **
10797995-CATA-C **
10798000-CAA-C **
10798022-C-T **
10798025-C-T **
13928136-C-A 11807430-C-A **
13946148-C-A 11825442-C-A FT80779 **
23317649-CT-C 21155763-CT-C 37×T**
6770069-C-A 6902028-C-A **
10971939-T-C **
7141005-C-A 7272964-C-A **
10825270-C-A **
10825283-T-TCGGGTTAATC **
14609795-G-C 12497997-G-C **
10932877-T-A **
10932915-C-T **
10932917-C-T **
8983060-G-T 9145451-G-T **
16432513-ATGTG-A 14320633-ATGTG-A 10×TG**
7257849-C-A 7389808-C-A **
10770425-G-T FT430445 **
10770427-C-T **
10691045-T-C **
19391121-C-A 17279241-C-A **
17175311-C-A 15063431-C-A **
10932945-A-C **
23808085-C-A 21646199-C-A **
4951467-G-C 5083426-G-C **
8811188-C-A 8943147-C-A **
10829694-C-A **
4898381-C-A 5030340-C-A **
28659643-C-A 26513496-C-A **
6277749-A-T 6409708-A-T IR3_Dst **
11649583-C-G DYZ17 **
10655901-T-C **
10655918-C-T **
10878245-A-G **
27585940-A-T 25439793-A-T P1_Y2 **
2860051-C-A 2992010-C-A **
14432273-C-A 12311546-C-A **
14517621-C-A 12405822-C-A **
15864078-C-A 13752198-C-A **
16944555-C-A 14832675-C-A **
17717035-C-A 15605155-C-A **
10971902-C-CA **
6626855-C-A 6758814-C-A **
16271855-C-A 14159975-C-A **
14239324-C-A 12118618-C-A **
24595383-AG-A 22449236-AG-A P3_t2 **
6971697-C-A 7103656-C-A **
23807394-C-T 21645508-C-T **
23807395-A-C 21645509-A-C **
23807396-C-T 21645510-C-T FT386231 **
4920339-G-T 5052298-G-T **
10885615-G-T **
21603966-TAA-T 19442080-TAA-T 11×A**
6814588-C-A 6946547-C-A **
10770611-TC-T **
22281808-C-T 20119922-C-T DYZ19 **
22281812-A-C 20119926-A-C DYZ19 **
21154030-C-A 18992144-C-A **
16981443-C-A 14869563-C-A **
6490588-C-A 6622547-C-A **
5443846-C-A 5575805-C-A **
13196469-C-A 11040793-C-A **
6765640-G-GTTT 6897599-G-GTTT 21×T**
13603044-C-A 11447368-C-A **
18241975-C-A 16130095-C-A **
10787302-CTCCAT-C **
28465164-G-GA 26319017-G-GA 8×A**
14143025-C-A 12022319-C-A 16×A**
10770602-C-T **
16562780-C-A 14450900-C-A **
2763773-C-CAA 2895732-C-CAA 20×A**
7579706-C-A 7711665-C-A **
15380459-G-T 13268579-G-T **
10988581-ACTCTATTC-A **
10932952-C-T **
4756501-C-A 4888460-C-A **
16018918-C-A 13907038-C-A **
22211933-C-A 20050047-C-A **
17257375-C-A 15145495-C-A **
3923370-C-A 4055329-C-A **
7224142-C-A 7356101-C-A **
5412629-C-A 5544588-C-A **
13566644-G-T 11410968-G-T **
13584674-C-A 11428998-C-A **
14527177-C-A 12415378-C-A **
2888867-TC-T 3020826-TC-T **
28715910-C-A 26569763-C-A **
13215413-C-A 11059737-C-A **
10943062-C-A **
26286001-G-T 24139854-G-T P1_Y1 **
16842060-C-A 14730180-C-A **
10932904-C-A **
10932928-T-A **
22520781-T-C 20358895-T-C **
8668501-C-A 8800460-C-A **
14579426-C-A 12467626-C-A **
22950268-C-A 20788382-C-A **
28591252-C-A 26445105-C-A **
10932894-G-GCAGTCCACAT **
16636115-C-A 14524235-C-A **
10996354-G-T **
13989071-C-A 11868365-C-A **
13489009-C-A 11333333-C-A **
9732895-C-CAA 9895286-C-CAA IR3_Prx 20×A**
13478212-G-T 11322536-G-T **
14483685-C-A 12362954-C-A **
5587374-G-T 5719333-G-T **
14527564-C-A 12415765-C-A **
4068749-C-A 4200708-C-A **
21802879-G-A 19640993-G-A **
23807448-C-T 21645562-C-T **
21678031-C-A 19516145-C-A **
22810975-C-A 20649089-C-A **
10812351-CT-C **
19732412-C-T 17620532-C-T P5_Prx **
22092940-C-A 19931054-C-A **
16932079-C-A 14820199-C-A **
11022223-C-A **
5537822-C-A 5669781-C-A **
3385282-C-A 3517241-C-A **
15171226-C-CTT 13059312-C-CTT 19×T**
10899312-C-A **
7579647-C-A 7711606-C-A **
17821905-C-A 15710025-C-A **
10943069-A-C **
21963870-C-A 19801984-C-A **
14022075-C-A 11901369-C-A **
8854260-C-A 8986219-C-A **
16952550-C-A 14840670-C-A **
56848526-C-A **
7095116-T-C 7227075-T-C **
16480069-C-A 14368189-C-A **
10026961-C-A 10189352-C-A **
7358087-C-A 7490046-C-A **
7285259-C-A 7417218-C-A **
19479899-C-A 17368019-C-A **
23143098-C-A 20981212-C-A **
7656763-C-A 7788722-C-A **
28545111-C-A 26398964-C-A **
14278471-C-A 12157765-C-A **
6434977-C-A 6566936-C-A **
7433601-C-A 7565560-C-A **
5449330-C-A 5581289-C-A **
8295594-GA-G 8427553-GA-G 10×A**
17300752-G-A 15188872-G-A FGC4479 **
27971709-T-G 25825562-T-G P1_Y2 **
19459364-C-A 17347484-C-A **
19122064-C-A 17010184-C-A **
10776566-C-T **
10750697-A-T **
10750706-G-C **
5645100-C-A 5777059-C-A **
16559920-C-A 14448040-C-A **
18838646-C-A 16726766-C-A **
56844769-G-T **
56839654-G-T **
13934374-C-A 11813668-C-A **
13218772-C-A 11063096-C-A **
6519318-G-GA 6651277-G-GA 9×A**
21118600-C-A 18956714-C-A **
4951472-A-C 5083431-A-C **
13227939-C-A 11072263-C-A **
13226366-C-A 11070690-C-A **
17254674-C-A 15142794-C-A **
13981620-C-A 11860914-C-A **
13880258-C-A 11759552-C-A **
5870059-C-A 6002018-C-A **
4805222-C-A 4937181-C-A **
13488911-C-A 11333235-C-A **
19146606-G-T 17034726-G-T **
14445070-C-A 12324343-C-A **
21824654-C-A 19662768-C-A **
5870067-C-A 6002026-C-A **
4957755-C-A 5089714-C-A **
10797955-C-T **
10880306-C-A **
16938505-C-A 14826625-C-A **
13258558-C-T 11102882-C-T 20×T**
14240398-C-A 12119692-C-A **
4730428-G-T 4862387-G-T **
10033076-C-A 10195467-C-A **
6774004-C-A 6905963-C-A **
16904663-CCA-C 14792783-CCA-C **
10950349-A-G **
8073278-C-A 8205237-C-A **
17589050-C-A 15477170-C-A **
6775296-G-C 6907255-G-C **
7699504-C-A 7831463-C-A **
6124205-C-A 6256164-C-A **
14195134-C-T 12074428-C-T FT329107 **
23345791-G-T 21183905-G-T **
5084767-C-A 5216726-C-A **
16004171-G-T 13892291-G-T **
15940143-C-A 13828263-C-A FT169102 **
3152070-G-T 3284029-G-T **
5931644-C-A 6063603-C-A **
13218898-C-A 11063222-C-A **
16245033-C-A 14133153-C-A **
8290852-C-A 8422811-C-A **
7110687-T-C 7242646-T-C **
2772770-C-A 2904729-C-A **
13945277-C-A 11824571-C-A **
18902100-C-A 16790220-C-A **
28798703-G-T 26652556-G-T **
28760110-C-A 26613963-C-A **
16028427-C-A 13916547-C-A **
11003880-C-A **
11031434-C-A **
19675478-C-A 17563598-C-A P5_Prx **
21488749-C-A 19326863-C-A **
28747663-C-A 26601516-C-A **
28609552-C-CTT 26463405-C-CTT 17×T**
24579811-TG-T 22433664-TG-T P3_t2 **
21691943-C-A 19530057-C-A **
19531609-C-A 17419729-C-A **
10988591-ATT-A **
16938334-C-A 14826454-C-A **
18625972-G-T 16514092-G-T FTB23181 **
14284892-C-A 12164186-C-A **
23345772-T-C 21183886-T-C **
6580527-C-A 6712486-C-A **
24446809-C-A 22300662-C-A **
21551634-C-A 19389748-C-A **
16990107-C-A 14878227-C-A **
10763236-C-A **
6886827-G-T 7018786-G-T **
8736583-C-A 8868542-C-A **
13197793-C-A 11042117-C-A **
28484874-C-A 26338727-C-A **
21375713-C-A 19213827-C-A **
56846937-G-T **
8379665-C-A 8511624-C-A **
7038561-C-A 7170520-C-A **
8852030-G-T 8983989-G-T **
14517114-C-A 12405315-C-A **
4240278-C-A 4372237-C-A **
10961318-A-C **
16320416-T-TA 14208536-T-TA 9×A**
2693329-C-A 2825288-C-A **
18008713-A-G 15896833-A-G P7_Dst **
17735327-C-A 15623447-C-A **
10766692-C-A **
18819423-C-A 16707543-C-A **
8061879-C-A 8193838-C-A **
19246861-C-A 17134981-C-A **
7020648-C-T 7152607-C-T FTA29995 **
14089848-C-A 11969142-C-A **
3727835-C-A 3859794-C-A **
9046982-G-T 9209373-G-T **
13478248-G-A 11322572-G-A **
13478249-A-T 11322573-A-T **
2744875-C-A 2876834-C-A **
2758527-A-T 2890486-A-T **
2775407-T-A 2907366-T-A **
2790335-C-A 2922294-C-A **
2792069-G-T 2924028-G-T **
2792818-C-A 2924777-C-A **
2792926-C-A 2924885-C-A **
2817176-C-A 2949135-C-A **
2950250-C-A 3082209-C-A **
2986624-C-A 3118583-C-A **
2997057-C-A 3129016-C-A **
2997244-C-A 3129203-C-A **
3267853-T-C 3399812-T-C **
3343980-C-A 3475939-C-A **
3346336-C-A 3478295-C-A **
3467689-C-A 3599648-C-A **
3594192-T-A 3726151-T-A **
3625949-C-A 3757908-C-A **
3641372-C-A 3773331-C-A **
3646237-C-A 3778196-C-A **
3741693-C-A 3873652-C-A **
3759443-C-A 3891402-C-A **
3835341-C-A 3967300-C-A **
3922730-C-A 4054689-C-A **
3950623-C-A 4082582-C-A **
3951437-T-A 4083396-T-A **
3986939-C-A 4118898-C-A **
4068532-C-A 4200491-C-A **
4078542-A-C 4210501-A-C **
4094428-C-A 4226387-C-A **
4140817-T-C 4272776-T-C **
4147481-C-A 4279440-C-A **
4271486-C-A 4403445-C-A **
4307508-G-T 4439467-G-T **
4366841-C-A 4498800-C-A **
4372119-C-A 4504078-C-A FT214549 **
4374360-C-A 4506319-C-A **
4387994-C-A 4519953-C-A **
4408251-C-A 4540210-C-A **
4443935-G-A 4575894-G-A **
4444769-T-C 4576728-T-C **
4448531-AT-A 4580490-AT-A **
4449082-G-T 4581041-G-T **
4467124-C-A 4599083-C-A **
4509433-C-A 4641392-C-A **
4535993-GA-G 4667952-GA-G 8×A**
4556952-G-A 4688911-G-A **
4609965-C-A 4741924-C-A **
4617647-A-G 4749606-A-G **
4665105-C-A 4797064-C-A **
4699952-A-G 4831911-A-G **
4757046-C-A 4889005-C-A **
4771808-T-C 4903767-T-C **
4773570-C-A 4905529-C-A **
4855707-T-C 4987666-T-C **
4855986-CT-C 4987945-CT-C 9×T**
5076242-C-A 5208201-C-A **
5110023-G-A 5241982-G-A **
5172196-C-G 5304155-C-G **
5190445-C-A 5322404-C-A **
5211771-C-A 5343730-C-A **
5214021-C-T 5345980-C-T **
5219643-C-A 5351602-C-A **
5241987-C-A 5373946-C-A **
5279794-G-T 5411753-G-T **
5282552-G-T 5414511-G-T **
5349196-G-T 5481155-G-T **
5349263-G-T 5481222-G-T **
5349338-G-T 5481297-G-T **
5501816-G-T 5633775-G-T **
5543376-G-T 5675335-G-T **
5635170-C-A 5767129-C-A **
5652630-G-T 5784589-G-T **
5666041-C-A 5798000-C-A **
5708521-C-A 5840480-C-A **
5816834-A-G 5948793-A-G **
5816838-C-A 5948797-C-A **
5863866-C-A 5995825-C-A **
5905412-C-A 6037371-C-A **
5922520-A-T 6054479-A-T **
5952501-G-T 6084460-G-T **
6058693-T-A 6190652-T-A **
6062599-G-T 6194558-G-T **
6062711-G-T 6194670-G-T **
6096135-G-T 6228094-G-T **
6096160-C-A 6228119-C-A **
6097228-T-C 6229187-T-C **
6210663-C-A 6342622-C-A IR3_Dst **
6375743-C-A 6507702-C-A **
6453672-T-C 6585631-T-C **
6462154-G-T 6594113-G-T **
6775285-C-G 6907244-C-G **
6775297-G-A 6907256-G-A **
6915819-GA-G 7047778-GA-G **
7054057-G-T 7186016-G-T **
7085337-C-A 7217296-C-A **
7110696-G-A 7242655-G-A **
7110706-A-G 7242665-A-G **
7111652-C-A 7243611-C-A **
7128327-T-A 7260286-T-A **
7253871-C-A 7385830-C-A **
7264836-A-C 7396795-A-C **
7275164-C-A 7407123-C-A **
7277405-C-A 7409364-C-A **
7305631-C-A 7437590-C-A **
7313545-C-A 7445504-C-A **
7320186-G-A 7452145-G-A **
7337256-C-A 7469215-C-A **
7359314-C-A 7491273-C-A **
7363883-GA-G 7495842-GA-G **
7390259-C-A 7522218-C-A **
7572842-C-A 7704801-C-A **
7590682-C-A 7722641-C-A **
7621369-T-C 7753328-T-C **
7699493-C-A 7831452-C-A **
8119044-T-C 8251003-T-C **
8370617-C-A 8502576-C-A **
8408480-C-A 8540439-C-A **
8661676-A-G 8793635-A-G **
8671637-C-A 8803596-C-A **
8761856-C-A 8893815-C-A **
8817028-A-T 8948987-A-T FT236270 **
9109397-G-T **
8988302-T-C 9150693-T-C **
9444870-C-T 9607261-C-T **
9482405-A-G 9644796-A-G **
9493497-C-A 9655888-C-A **
9501260-A-G 9663651-A-G **
9515123-C-A 9677514-C-A **
9938540-C-A 10100931-C-A **
9942861-C-A 10105252-C-A **
9945580-T-C 10107971-T-C **
9967358-C-A 10129749-C-A **
9990910-A-C 10153301-A-C **
10011701-A-G 10174092-A-G **
10026828-C-A 10189219-C-A **
10051378-A-T 10213769-A-T **
10072907-G-A 10235298-G-A **
10080338-C-A 10242729-C-A **
10661247-C-A **
10661274-C-A **
10668047-T-A **
10668339-G-GCAATCCACTCCACTCAACTC **
10673745-C-G **
10673749-T-G **
10673789-C-G **
10678092-C-T **
10686891-T-C **
10690814-C-A **
10746887-C-A **
10746942-CCAT-C **
10750696-G-C **
10750711-ACGC-A **
10761050-C-A **
10770231-C-A **
10775934-C-A **
10791130-C-A **
10794929-C-A **
10795895-C-A **
10799068-C-A **
10801381-G-T **
10802448-C-A **
10821653-G-T **
10857419-C-A **
10876475-C-A **
10878250-A-G **
10886933-C-A **
10892455-C-A **
10893458-C-A **
10900787-C-A **
10921226-C-A **
10922078-A-G **
10932954-CCACTA-C **
10934416-C-A **
10938142-C-A **
10939407-C-A **
10948929-C-A **
10951720-C-A **
10971331-T-A **
10971834-G-A **
10971988-A-G **
10979198-C-T **
10983836-G-A FT48494 **
10988612-C-G **
10996357-C-A **
10999225-T-C **
11008244-C-A **
11035810-G-T **
11036023-T-C **
13253222-G-A 11097546-G-A **
13254616-T-C 11098940-T-C **
13257355-C-A 11101679-C-A **
13280839-C-A 11125163-C-A **
13468452-T-A 11312776-T-A **
13472187-C-CA 11316511-C-CA **
13504947-G-A 11349271-G-A **
13512256-G-T 11356580-G-T **
13573604-C-A 11417928-C-A **
13625727-C-A 11470051-C-A **
13626544-C-A 11470868-C-A **
13631423-C-G 11475747-C-G **
13641281-C-A 11485605-C-A **
13642595-C-T 11486919-C-T **
11651025-A-G DYZ17 **
11660087-G-T DYZ17 **
11660201-G-T DYZ17 **
11662430-G-T DYZ17 **
11675204-A-T DYZ17 **
11675220-T-A DYZ17 **
11675221-G-C DYZ17 **
11675224-C-A DYZ17 **
11675226-C-T DYZ17 **
13809426-A-G 11688720-A-G DYZ17 **
13809496-G-T 11688790-G-T DYZ17 **
13870661-C-A 11749955-C-A **
13870711-C-A 11750005-C-A **
13891531-C-A 11770825-C-A **
13898993-C-A 11778287-C-A **
13922769-A-G 11802063-A-G **
14019901-T-C 11899195-T-C **
14041300-C-A 11920594-C-A **
14074145-CT-C 11953439-CT-C **
14180729-C-A 12060023-C-A **
14195130-G-C 12074424-G-C **
14195133-A-T 12074427-A-T **
14195140-C-A 12074434-C-A **
14195152-T-G 12074446-T-G **
14212958-C-A 12092252-C-A **
14240118-A-C 12119412-A-C **
14301858-A-T 12181152-A-T **
14343983-G-C 12223278-G-C **
14344118-A-G 12223413-A-G **
14430648-A-G 12309921-A-G **
14463637-C-A 12342910-C-A **
14470547-C-A 12349816-C-A **
14502576-A-G 12390781-A-G **
14517086-C-A 12405287-C-A 8×T**
14518704-C-A 12406905-C-A **
14563420-C-A 12451620-C-A **
14614656-C-A 12502854-C-A **
14648825-C-A 12536890-C-A **
14717699-G-A 12605767-G-A **
14764843-T-A 12652912-T-A **
15170754-C-A 13058840-C-A **
15177732-C-A 13065818-C-A **
15179563-C-A 13067649-C-A **
15189514-A-T 13077600-A-T **
15189534-T-G 13077620-T-G **
15221392-T-A 13109478-T-A **
15301760-G-A 13189859-G-A **
15368941-C-A 13257061-C-A **
15423894-G-T 13312014-G-T **
15542666-A-G 13430786-A-G **
15648007-C-A 13536127-C-A **
15676959-T-C 13565079-T-C **
15728722-C-A 13616842-C-A **
15729003-C-A 13617123-C-A **
15776058-T-C 13664178-T-C **
15918817-G-T 13806937-G-T **
15921819-G-A 13809939-G-A **
16015788-T-C 13903908-T-C **
16017150-T-A 13905270-T-A **
16094710-G-T 13982830-G-T **
16118985-T-G 14007105-T-G P8_Prx **
16172052-T-A 14060172-T-A **
16177223-C-A 14065343-C-A **
16355019-G-T 14243139-G-T **
16381434-A-T 14269554-A-T **
16462429-C-A 14350549-C-A **
16462538-C-A 14350658-C-A FT111562 **
16559861-A-C 14447981-A-C **
16604918-G-A 14493038-G-A **
16604923-C-A 14493043-C-A **
16623246-G-T 14511366-G-T **
16629368-C-A 14517488-C-A **
16682726-T-C 14570846-T-C **
16702917-C-A 14591037-C-A **
16847774-C-T 14735894-C-T **
16933042-A-C 14821162-A-C **
16971256-T-A 14859376-T-A **
17183326-A-T 15071446-A-T **
17183359-C-G 15071479-C-G **
17218354-C-A 15106474-C-A **
17227748-A-G 15115868-A-G **
17375901-G-T 15264021-G-T **
17454403-C-A 15342523-C-A **
17455578-G-T 15343698-G-T **
17543988-A-C 15432108-A-C **
17548589-C-A 15436709-C-A **
17588624-A-G 15476744-A-G **
17600654-C-A 15488774-C-A **
17667016-C-A 15555136-C-A **
17737735-G-A 15625855-G-A **
17779471-G-A 15667591-G-A **
17796194-C-A 15684314-C-A **
17928079-C-A 15816199-C-A **
18226345-C-A 16114465-C-A **
18270219-T-C 16158339-T-C **
18381987-A-C 16270107-A-C P6_Gap **
18382022-C-A 16270142-C-A P6_Gap **
18707853-C-A 16595973-C-A **
18756145-G-A 16644265-G-A **
18901977-A-G 16790097-A-G **
18902247-C-A 16790367-C-A **
19223182-C-A 17111302-C-A **
19250093-A-C 17138213-A-C **
19379557-C-A 17267677-C-A **
19379573-C-A 17267693-C-A **
19464831-C-A 17352951-C-A **
19465886-C-T 17354006-C-T **
19510062-CTT-C 17398182-CTT-C 12×T**
19528479-C-A 17416599-C-A FGC68362 **
19535680-T-C 17423800-T-C **
19557466-C-A 17445586-C-A **
19774094-A-AT 17662214-A-AT P5_Prx **
19854051-A-AC 17742171-A-AC P5_Prx **
19963835-T-TAC 17851955-T-TAC P5_Prx **
20673707-C-A 18511821-C-A P4_Prx **
20726809-C-T 18564923-C-T P4_Prx **
21073158-C-A 18911272-C-A **
21120328-C-A 18958442-C-A **
21220296-C-A 19058410-C-A **
21320238-C-A 19158352-C-A **
21322438-G-T 19160552-G-T **
21322449-A-T 19160563-A-T **
21334775-A-C 19172889-A-C **
21338638-T-G 19176752-T-G **
21371042-C-A 19209156-C-A **
21409626-C-A 19247740-C-A **
21457760-G-T 19295874-G-T **
21457925-G-A 19296039-G-A **
21681629-A-G 19519743-A-G **
21796579-C-A 19634693-C-A **
21828501-C-A 19666615-C-A **
21836288-C-A 19674402-C-A **
21954655-C-A 19792769-C-A **
21964727-C-A 19802841-C-A **
21968174-T-C 19806288-T-C **
21969283-G-A 19807397-G-A **
21991434-T-A 19829548-T-A **
22064159-T-A 19902273-T-A **
22124116-C-A 19962230-C-A **
22240539-G-T 20078653-G-T DYZ19 **
22256855-G-T 20094969-G-T DYZ19 **
22281791-G-A 20119905-G-A DYZ19 **
22281821-A-G 20119935-A-G DYZ19 **
22602143-C-A 20440257-C-A **
22874317-C-A 20712431-C-A **
22991067-G-A 20829181-G-A **
23065295-C-A 20903409-C-A **
23096952-G-A 20935066-G-A **
23105456-G-T 20943570-G-T FTA20683 **
23181440-T-A 21019554-T-A **
23345739-A-G 21183853-A-G **
23345740-G-C 21183854-G-C **
23345749-G-A 21183863-G-A **
23345758-G-T 21183872-G-T **
23345764-C-T 21183878-C-T **
23345765-A-G 21183879-A-G **
23345776-T-C 21183890-T-C **
23345779-C-T 21183893-C-T **
23345780-A-G 21183894-A-G **
23345787-T-C 21183901-T-C **
23345796-T-C 21183910-T-C **
23345806-T-A 21183920-T-A **
23372262-C-A 21210376-C-A **
23372458-G-T 21210572-G-T **
23398372-C-A 21236486-C-A **
23513919-G-A 21352033-G-A **
23790199-A-G 21628313-A-G FTA2477 **
23807426-A-AAAAC 21645540-A-AAAAC **
23807439-G-T 21645553-G-T **
23807456-T-G 21645570-T-G **
23807481-G-A 21645595-G-A **
23807485-C-A 21645599-C-A **
23807486-A-G 21645600-A-G **
23807496-C-T 21645610-C-T **
23825558-G-T 21663672-G-T **
23825588-C-A 21663702-C-A **
23875415-C-T 21713529-C-T **
23885431-G-T 21723545-G-T **
23899403-T-C 21737517-T-C **
23983544-C-A 21837397-C-A **
24373291-C-A 22227144-C-A **
24407061-G-T 22260914-G-T **
24447022-G-T 22300875-G-T **
24671209-G-T 22525062-G-T P3_b2 **
25804896-T-G 23658749-T-G P1_b3 **
25850800-C-T 23704653-C-T P1_Y1 **
25899740-C-G 23753593-C-G P1_Y1 **
26328778-A-C 24182631-A-C P1_Y1 **
27756340-T-C 25610193-T-C P1_Y2 **
27829097-A-T 25682950-A-T P1_Y2 **
27835795-G-A 25689648-G-A P1_Y2 **
27835802-T-G 25689655-T-G P1_Y2 **
27835808-T-A 25689661-T-A P1_Y2 **
27835815-A-C 25689668-A-C P1_Y2 **
27835828-G-GAGGGGCTA 25689681-G-GAGGGGCTA P1_Y2 **
27835838-T-A 25689691-T-A P1_Y2 **
27958475-G-T 25812328-G-T P1_Y2 **
28461603-T-C 26315456-T-C **
28483844-C-A 26337697-C-A **
28542977-C-A 26396830-C-A **
28549296-G-T 26403149-G-T **
28558865-C-A 26412718-C-A **
28598483-C-A 26452336-C-A **
28609155-C-A 26463008-C-A **
28619308-C-A 26473161-C-A **
28637180-G-T 26491033-G-T **
28654238-T-A 26508091-T-A **
28672994-C-A 26526847-C-A **
28707994-C-A 26561847-C-A **
28755066-C-T 26608919-C-T **
56835340-C-T **
56844570-C-A **
56844627-G-T **
56851011-C-A **
56872936-G-T **
30963-G-A **
13725511-T-A 11569835-T-A DYZ17 ***
27981914-T-TG 25835767-T-TG P1_Y2 ***
20767851-TA-T 18605965-TA-T P4_Prx ***
8452224-C-A 8584183-C-A ***
21177286-C-A 19015400-C-A ***
58977013-T-A,G 56830866-T-A,G ***
8426377-GCTTCTT-G,GCTT 8558336-GCTTCTT-G,GCTT 22×CTT***
9771940-C-T 9934331-C-T 18×T***
10807239-A-T ***
14235871-GA-G 12115165-GA-G 10×A***
15352902-C-A 13241021-C-A ***
10776535-T-A ***
22737231-CA-C,CAA 20575345-CA-C,CAA 18×A***
15211049-G-T 13099135-G-T ***
22536287-C-A 20374401-C-A ***
11014432-A-AATTCC ***
10663078-C-A ***
8773858-CAAA-C,CAA 8905817-CAAA-C,CAA 16×A***
10875835-C-A ***
17464729-C-A 15352849-C-A ***
2774663-CTTTT-C 2906622-CTTTT-C 18×T***
19143125-ATT-A,ATTT 17031245-ATT-A,ATTT 17×T***
19505328-C-A 17393448-C-A ***
8888375-CTTT-C 9020334-CTTT-C 25×T***
8468095-C-A 8600054-C-A ***
10758037-T-C ***
15285849-C-A 13173948-C-A ***
7201907-C-A 7333866-C-A ***
4388263-C-A 4520222-C-A ***
8398999-G-A 8530958-G-A ***
8913767-C-A 9045726-C-A ***
9057145-C-A ***
10080228-C-A 10242619-C-A ***
10776538-A-G ***
10859893-C-A ***
13298307-C-A 11142631-C-A ***
13629206-TC-T 11473530-TC-T ***
13825068-C-A 11704362-C-A DYZ17 ***
15047553-T-C 12935644-T-C ***
15652802-C-A 13540922-C-A ***
15904149-CAA-C,CA 13792269-CAA-C,CA 20×A***
16057192-C-A 13945312-C-A ***
16258046-C-A 14146166-C-A ***
16422127-C-A 14310247-C-A ***
16533365-C-A 14421485-C-A ***
17126127-C-A 15014247-C-A ***
17127958-C-A 15016078-C-A ***
17515584-TAAAAA-T,TAAA 15403704-TAAAAA-T,TAAA 17×A***
21220205-C-A 19058319-C-A ***
56836493-C-G ***
30928-A-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.