Calhoun
FTDNA: 310865, BigY2: 310865Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 310865 | BigY2 310865 |
---|---|---|---|---|---|---|---|---|---|
19752170-C-T | 17640290-C-T | P5_Prx | *** | A* | |||||
6818534-T-A | 6950493-T-A | BY61516 | Y | Y | + | + | |||
8889965-A-G | 9021924-A-G | BY76688 | Y | + | + | ||||
13225198-G-T | 11069522-G-T | BY84653 | + | + | |||||
14664783-C-G | 12552849-C-G | BY97073 | Y | Y | + | + | |||
15032897-A-G | 12920985-A-G | BY99263 | Y | Y | + | + | |||
16990973-C-T | 14879093-C-T | BY111614 | Y | Y | + | + | |||
18181615-G-A | 16069735-G-A | BY120698 | Y | Y | + | + | |||
22255541-G-T | 20093655-G-T | DYZ19 | *** | * | |||||
22312540-G-T | 20150654-G-T | DYZ19 | *** | * | |||||
13141245-A-C | 10630731-A-C | ** | |||||||
18050087-T-A | 15938207-T-A | S20549 | ** | ||||||
7534643-C-A | 7666602-C-A | FT12602 | 17×A | ** | |||||
19271589-C-A | 17159709-C-A | ** | |||||||
14214957-C-T | 12094251-C-T | YSC0001258 PF3537 CTS2197 | ** | ** | |||||
22816222-T-C | 20654336-T-C | Z9739 | ** | ||||||
21462683-C-A | 19300797-C-A | ** | |||||||
23401468-C-A | 21239582-C-A | ** | |||||||
13385079-CT-C | 11229403-CT-C | 14×T | ** | ||||||
23223343-T-A | 21061457-T-A | ** | |||||||
13488910-C-T | 11333234-C-T | ** | |||||||
13461117-T-A | 11305441-T-A | ** | |||||||
7008302-CAAT-C | 7140261-CAAT-C | 11×AAT | ** | ||||||
13488895-G-C | 11333219-G-C | ** | |||||||
13488905-C-A | 11333229-C-A | ** | |||||||
4340232-A-G | 4472191-A-G | ** | |||||||
11004408-T-G | ** | ||||||||
16422454-C-A | 14310574-C-A | ** | |||||||
10885214-T-C | ** | ||||||||
7239516-C-A | 7371475-C-A | ** | |||||||
10969811-C-A | ** | ||||||||
23465809-G-T | 21303923-G-T | ** | |||||||
6765640-GTTT-G | 6897599-GTTT-G | 21×T | ** | ||||||
4900220-C-A | 5032179-C-A | ** | |||||||
11002078-C-A | ** | ||||||||
17137087-C-A | 15025207-C-A | ** | |||||||
28741200-TA-T | 26595053-TA-T | 8×A | ** | ||||||
2806229-T-A | 2938188-T-A | ** | |||||||
19622205-C-A | 17510325-C-A | P5_Prx | ** | ||||||
9440266-C-A | 9602657-C-A | ** | |||||||
22662289-GTT-G | 20500403-GTT-G | 13×T | ** | ||||||
14511404-C-A | 12399609-C-A | ** | |||||||
28542416-CAAAAA-C | 26396269-CAAAAA-C | 17×A | ** | ||||||
10877832-C-T | ** | ||||||||
10989388-T-C | ** | ||||||||
10989434-C-T | ** | ||||||||
10989435-C-CT | ** | ||||||||
10794991-G-T | ** | ||||||||
10751130-C-A | ** | ||||||||
10688216-A-T | ** | ||||||||
10688218-T-G | ** | ||||||||
11024703-C-A | ** | ||||||||
10885180-TCC-T | ** | ||||||||
10885183-A-AT | ** | ||||||||
10885186-C-CTTTT | ** | ||||||||
15767055-C-A | 13655175-C-A | ** | |||||||
20434784-T-AA | 18272898-T-AA | P5_Dst | ** | ||||||
10658357-C-T | ** | ||||||||
13309705-C-A | 11154029-C-A | FT442614 | ** | ||||||
18539271-C-A | 16427391-C-A | ** | |||||||
5586750-G-T | 5718709-G-T | ** | |||||||
10760750-C-T | ** | ||||||||
15034910-C-A | 12922998-C-A | ** | |||||||
11013242-C-T | ** | ||||||||
10759185-T-C | ** | ||||||||
10759191-C-A | ** | ||||||||
2772512-C-CA | 2904471-C-CA | 25×A | ** | ||||||
7924924-GT-G | 8056883-GT-G | 11×T | ** | ||||||
10651650-G-A | ** | ||||||||
10651656-G-A | ** | ||||||||
10651665-C-G | ** | ||||||||
13461104-G-T | 11305428-G-T | ** | |||||||
10768563-A-T | ** | ||||||||
10768586-C-A | ** | ||||||||
10768603-T-G | ** | ||||||||
10768615-T-A | ** | ||||||||
10768619-A-G | ** | ||||||||
10768553-T-C | ** | ||||||||
25533446-G-T | 23387299-G-T | P1_gr1 | ** | ||||||
17313564-C-A | 15201684-C-A | ** | |||||||
10664794-C-A | ** | ||||||||
10994151-A-T | ** | ||||||||
16015656-C-A | 13903776-C-A | ** | |||||||
10877787-A-T | ** | ||||||||
13652270-GTGGAA-G | 11496594-GTGGAA-G | 5×TGGAA | ** | ||||||
18902901-C-A | 16791021-C-A | ** | |||||||
10807209-T-G | ** | ||||||||
10760735-T-C | ** | ||||||||
10794843-C-T | ** | ||||||||
11645907-C-G | ** | ||||||||
21703277-C-A | 19541391-C-A | ** | |||||||
16424874-G-T | 14312994-G-T | ** | |||||||
22252485-G-A | 20090599-G-A | DYZ19 | ** | ||||||
10989406-G-T | ** | ||||||||
16050063-C-A | 13938183-C-A | ** | |||||||
22076266-C-A | 19914380-C-A | ** | |||||||
7241107-C-A | 7373066-C-A | ** | |||||||
26098024-G-A | 23951877-G-A | P1_Y1 | ** | ||||||
2855467-A-T | 2987426-A-T | 16×T | ** | ||||||
7174410-C-A | 7306369-C-A | ** | |||||||
22783011-C-A | 20621125-C-A | ** | |||||||
23137491-C-A | 20975605-C-A | ** | |||||||
10767865-G-A | ** | ||||||||
14022097-C-A | 11901391-C-A | ** | |||||||
14550670-C-A | 12438871-C-A | ** | |||||||
19412872-C-A | 17300992-C-A | FT10527 | ** | ||||||
10906344-C-A | ** | ||||||||
10657575-C-A | ** | ||||||||
22027809-C-A | 19865923-C-A | ** | |||||||
16421276-G-A | 14309396-G-A | FT229115 | ** | ||||||
10760755-C-T | ** | ||||||||
14505994-C-A | 12394199-C-A | ** | |||||||
20689817-T-TA | 18527931-T-TA | P4_Prx | ** | ||||||
17385313-C-A | 15273433-C-A | ** | |||||||
9341026-C-A | 9503417-C-A | ** | |||||||
21234821-C-A | 19072935-C-A | ** | |||||||
17380724-C-A | 15268844-C-A | ** | |||||||
9927303-A-G | 10089694-A-G | ** | |||||||
10759150-A-C | ** | ||||||||
10759183-T-C | ** | ||||||||
16429632-G-T | 14317752-G-T | ** | |||||||
10651616-C-T | ** | ||||||||
23320258-GT-G | 21158372-GT-G | 10×T | ** | ||||||
13988965-C-A | 11868259-C-A | ** | |||||||
10989375-C-T | ** | ||||||||
10989396-C-A | ** | ||||||||
10989403-T-C | ** | ||||||||
10989410-C-A | ** | ||||||||
10989412-A-T | ** | ||||||||
10989480-C-T | ** | ||||||||
10768585-T-A | ** | ||||||||
14077890-C-A | 11957184-C-A | ** | |||||||
21353278-C-A | 19191392-C-A | ** | |||||||
17927421-C-A | 15815541-C-A | ** | |||||||
18035826-C-T | 15923946-C-T | ** | |||||||
23833024-C-A | 21671138-C-A | FT182836 | ** | ||||||
10690984-CCTCCA-C | ** | ||||||||
22068755-C-A | 19906869-C-A | ** | |||||||
10877765-C-T | ** | ||||||||
17561905-A-G | 15450025-A-G | ** | |||||||
21672196-CA-C | 19510310-CA-C | ** | |||||||
14568869-C-A | 12457069-C-A | ** | |||||||
16559882-C-A | 14448002-C-A | ** | |||||||
19235750-C-A | 17123870-C-A | ** | |||||||
18035862-G-A | 15923982-G-A | FTB52873 | ** | ||||||
10759202-A-T | ** | ||||||||
10877840-T-A | ** | ||||||||
10877841-T-C | ** | ||||||||
7363184-C-A | 7495143-C-A | ** | |||||||
13981851-C-A | 11861145-C-A | ** | |||||||
11014828-C-A | FT393718 | ** | |||||||
13488244-C-A | 11332568-C-A | ** | |||||||
17668369-C-A | 15556489-C-A | ** | |||||||
16813977-C-A | 14702097-C-A | ** | |||||||
7269871-A-T | 7401830-A-T | ** | |||||||
5415322-G-GTATC | 5547281-G-GTATC | ** | |||||||
21133368-C-A | 18971482-C-A | ** | |||||||
18789648-C-A | 16677768-C-A | ** | |||||||
14272937-G-T | 12152231-G-T | ** | |||||||
28111516-C-A | 25965369-C-A | P1_Y2 | ** | ||||||
18422876-C-A | 16310996-C-A | P6_Gap | ** | ||||||
56858798-A-G | ** | ||||||||
14224195-C-A | 12103489-C-A | ** | |||||||
23425343-CAAA-C | 21263457-CAAA-C | 14×A | ** | ||||||
28492055-C-A | 26345908-C-A | ** | |||||||
9978970-C-A | 10141361-C-A | ** | |||||||
10987495-A-T | ** | ||||||||
15595090-C-A | 13483210-C-A | ** | |||||||
15323692-AAG-A | 13211810-AAG-A | ** | |||||||
28658565-C-A | 26512418-C-A | ** | |||||||
21597030-C-A | 19435144-C-A | ** | |||||||
16458312-C-A | 14346432-C-A | ** | |||||||
21283334-T-A | 19121448-T-A | ** | |||||||
15927769-A-G | 13815889-A-G | ** | |||||||
8673195-C-A | 8805154-C-A | ** | |||||||
10774424-C-A | ** | ||||||||
6384415-G-T | 6516374-G-T | ** | |||||||
5242673-C-A | 5374632-C-A | ** | |||||||
18190424-C-A | 16078544-C-A | ** | |||||||
13870746-C-A | 11750040-C-A | ** | |||||||
10987535-A-C | ** | ||||||||
10759158-C-T | ** | ||||||||
10759163-T-C | ** | ||||||||
24961015-C-A | 22814868-C-A | g1 | ** | ||||||
10652541-C-A | ** | ||||||||
8052351-C-A | 8184310-C-A | ** | |||||||
10757807-CTCCAT-C | ** | ||||||||
21455878-C-T | 19293992-C-T | ** | |||||||
10929990-G-T | ** | ||||||||
28520428-C-A | 26374281-C-A | ** | |||||||
6402694-C-A | 6534653-C-A | ** | |||||||
10759170-C-T | ** | ||||||||
10780108-C-A | ** | ||||||||
23007739-G-T | 20845853-G-T | ** | |||||||
6911445-C-A | 7043404-C-A | ** | |||||||
15924066-C-A | 13812186-C-A | ** | |||||||
10983571-C-A | ** | ||||||||
5818530-G-C | 5950489-G-C | ** | |||||||
28687370-G-A | 26541223-G-A | ** | |||||||
19791375-C-A | 17679495-C-A | P5_Prx | ** | ||||||
10866144-C-A | ** | ||||||||
56854662-G-A | ** | ||||||||
15742420-C-A | 13630540-C-A | ** | |||||||
14550681-C-A | 12438882-C-A | ** | |||||||
4261654-C-A | 4393613-C-A | ** | |||||||
7099264-C-A | 7231223-C-A | ** | |||||||
13481933-C-A | 11326257-C-A | ** | |||||||
5709032-C-A | 5840991-C-A | ** | |||||||
9824099-C-A | 9986490-C-A | ** | |||||||
14764900-A-C | 12652969-A-C | ** | |||||||
17490177-A-G | 15378297-A-G | ** | |||||||
18902914-C-A | 16791034-C-A | ** | |||||||
5458579-C-A | 5590538-C-A | ** | |||||||
10994170-C-T | ** | ||||||||
8911567-T-C | 9043526-T-C | ** | |||||||
18035818-C-T | 15923938-C-T | ** | |||||||
10987484-CAGTCT-C | ** | ||||||||
19818813-A-AC | 17706933-A-AC | P5_Prx | ** | ||||||
22816230-G-T | 20654344-G-T | ** | |||||||
10760740-T-C | ** | ||||||||
13226795-C-A | 11071119-C-A | ** | |||||||
13476954-C-A | 11321278-C-A | ** | |||||||
2742446-C-T | 2874405-C-T | FT129501 | ** | ||||||
2767836-C-A | 2899795-C-A | ** | |||||||
2774751-C-A | 2906710-C-A | ** | |||||||
2961284-A-G | 3093243-A-G | ** | |||||||
3025204-G-T | 3157163-G-T | ** | |||||||
3051377-T-C | 3183336-T-C | ** | |||||||
3076432-C-A | 3208391-C-A | ** | |||||||
3076514-C-T | 3208473-C-T | ** | |||||||
3087189-G-T | 3219148-G-T | ** | |||||||
3130911-T-G | 3262870-T-G | ** | |||||||
3164590-A-T | 3296549-A-T | ** | |||||||
3339662-C-T | 3471621-C-T | ** | |||||||
3340603-A-G | 3472562-A-G | ** | |||||||
3346415-A-G | 3478374-A-G | ** | |||||||
3411803-G-T | 3543762-G-T | ** | |||||||
3411988-C-A | 3543947-C-A | ** | |||||||
3491946-A-G | 3623905-A-G | FT317437 | ** | ||||||
3500091-C-A | 3632050-C-A | ** | |||||||
3694241-G-T | 3826200-G-T | ** | |||||||
3731970-T-C | 3863929-T-C | ** | |||||||
3758515-T-C | 3890474-T-C | ** | |||||||
3829187-C-A | 3961146-C-A | ** | |||||||
3885002-A-T | 4016961-A-T | ** | |||||||
3889917-C-A | 4021876-C-A | ** | |||||||
4003182-A-G | 4135141-A-G | ** | |||||||
4049756-G-A | 4181715-G-A | ** | |||||||
4124035-C-A | 4255994-C-A | ** | |||||||
4213658-G-T | 4345617-G-T | ** | |||||||
4216556-A-G | 4348515-A-G | ** | |||||||
4226202-T-A | 4358161-T-A | ** | |||||||
4235677-A-T | 4367636-A-T | ** | |||||||
4244434-C-A | 4376393-C-A | ** | |||||||
4254870-T-C | 4386829-T-C | ** | |||||||
4325446-C-A | 4457405-C-A | ** | |||||||
4340307-C-A | 4472266-C-A | ** | |||||||
4377137-C-A | 4509096-C-A | ** | |||||||
4435750-C-A | 4567709-C-A | ** | |||||||
4435798-C-A | 4567757-C-A | ** | |||||||
4509392-T-C | 4641351-T-C | ** | |||||||
4560954-A-T | 4692913-A-T | ** | |||||||
4585439-C-A | 4717398-C-A | ** | |||||||
4781079-G-T | 4913038-G-T | ** | |||||||
5052615-G-T | 5184574-G-T | ** | |||||||
5200662-T-C | 5332621-T-C | FTB55580 | ** | ||||||
5493465-C-T | 5625424-C-T | ** | |||||||
5645056-G-A | 5777015-G-A | ** | |||||||
5673372-T-C | 5805331-T-C | ** | |||||||
5673399-C-A | 5805358-C-A | ** | |||||||
5692995-C-A | 5824954-C-A | ** | |||||||
5795997-A-G | 5927956-A-G | ** | |||||||
5888456-C-A | 6020415-C-A | ** | |||||||
5990324-G-T | 6122283-G-T | ** | |||||||
6102381-C-A | 6234340-C-A | ** | |||||||
6542570-C-A | 6674529-C-A | ** | |||||||
6582350-C-A | 6714309-C-A | ** | |||||||
6646834-T-C | 6778793-T-C | ** | |||||||
6694674-C-A | 6826633-C-A | ** | |||||||
6772413-C-A | 6904372-C-A | ** | |||||||
6892518-A-G | 7024477-A-G | ** | |||||||
7015213-C-A | 7147172-C-A | ** | |||||||
7042811-G-A | 7174770-G-A | ** | |||||||
7097506-G-T | 7229465-G-T | ** | |||||||
7098810-CCAAGGTCTCACCACTG-C | 7230769-CCAAGGTCTCACCACTG-C | ** | |||||||
7131319-C-A | 7263278-C-A | ** | |||||||
7172452-G-T | 7304411-G-T | ** | |||||||
7185605-T-C | 7317564-T-C | ** | |||||||
7239666-G-T | 7371625-G-T | ** | |||||||
7243758-G-A | 7375717-G-A | ** | |||||||
7253982-A-G | 7385941-A-G | ** | |||||||
7310568-GA-G | 7442527-GA-G | ** | |||||||
7629817-C-A | 7761776-C-A | ** | |||||||
7641002-C-A | 7772961-C-A | ** | |||||||
7754132-C-A | 7886091-C-A | ** | |||||||
7896880-T-C | 8028839-T-C | ** | |||||||
7897053-C-G | 8029012-C-G | ** | |||||||
8167923-C-A | 8299882-C-A | ** | |||||||
8326157-C-A | 8458116-C-A | ** | |||||||
8385253-C-A | 8517212-C-A | ** | |||||||
8678369-C-A | 8810328-C-A | ** | |||||||
8854284-G-C | 8986243-G-C | ** | |||||||
9313818-G-T | 9476209-G-T | ** | |||||||
9509677-T-C | 9672068-T-C | ** | |||||||
9963257-A-G | 10125648-A-G | ** | |||||||
9986154-C-A | 10148545-C-A | ** | |||||||
10010522-T-C | 10172913-T-C | ** | |||||||
10010600-A-G | 10172991-A-G | ** | |||||||
10023453-TA-T | 10185844-TA-T | ** | |||||||
10630699-C-T | ** | ||||||||
10630728-C-G | ** | ||||||||
10647912-C-A | ** | ||||||||
10661028-A-G | ** | ||||||||
10669131-C-T | ** | ||||||||
10689057-C-A | ** | ||||||||
10751121-C-T | ** | ||||||||
10751136-T-G | ** | ||||||||
10751138-T-A | ** | ||||||||
10751163-C-T | ** | ||||||||
10751170-A-C | ** | ||||||||
10751172-TCCATTC-T | ** | ||||||||
10756983-T-C | ** | ||||||||
10764432-G-T | ** | ||||||||
10780110-C-G | ** | ||||||||
10782109-G-A | ** | ||||||||
10790072-A-C | ** | ||||||||
10880917-C-A | ** | ||||||||
10915948-A-T | ** | ||||||||
10915956-T-A | ** | ||||||||
10915965-T-C | ** | ||||||||
10915966-C-G | ** | ||||||||
10944635-T-G | ** | ||||||||
10953299-CTCCAT-C | ** | ||||||||
10969871-C-A | ** | ||||||||
10987516-T-TTCCA | ** | ||||||||
10987522-T-TGCATA | ** | ||||||||
10991120-C-A | ** | ||||||||
10994231-A-G | ** | ||||||||
11004031-A-C | ** | ||||||||
11018811-C-A | ** | ||||||||
13252775-G-T | 11097099-G-T | ** | |||||||
13258681-C-G | 11103005-C-G | ** | |||||||
13259150-C-A | 11103474-C-A | ** | |||||||
13502495-C-A | 11346819-C-A | ** | |||||||
13573586-A-C | 11417910-A-C | ** | |||||||
11659279-A-G | ** | ||||||||
11659280-A-T | ** | ||||||||
11659286-A-G | ** | ||||||||
11671202-G-T | ** | ||||||||
11674768-G-T | ** | ||||||||
11674913-G-T | ** | ||||||||
13899179-T-C | 11778473-T-C | ** | |||||||
13899214-C-A | 11778508-C-A | ** | |||||||
13907455-C-A | 11786749-C-A | ** | |||||||
13989102-T-C | 11868396-T-C | ** | |||||||
14068444-T-C | 11947738-T-C | ** | |||||||
14218428-C-CA | 12097722-C-CA | ** | |||||||
14232006-G-A | 12111300-G-A | ** | |||||||
14270579-C-A | 12149873-C-A | Y90881 | ** | ||||||
14430480-C-A | 12309753-C-A | ** | |||||||
14567851-C-A | 12456051-C-A | ** | |||||||
14574639-C-T | 12462839-C-T | ** | |||||||
14764895-G-C | 12652964-G-C | ** | |||||||
15034885-C-A | 12922973-C-A | ** | |||||||
15049974-C-A | 12938065-C-A | ** | |||||||
15106857-T-C | 12994944-T-C | ** | |||||||
15380522-G-T | 13268642-G-T | ** | |||||||
15445585-A-T | 13333705-A-T | ** | |||||||
15490583-A-G | 13378703-A-G | ** | |||||||
15623322-C-A | 13511442-C-A | ** | |||||||
15626553-G-A | 13514673-G-A | ** | |||||||
15642875-C-A | 13530995-C-A | ** | |||||||
15684479-C-A | 13572599-C-A | ** | |||||||
16017306-T-C | 13905426-T-C | ** | |||||||
16056896-G-T | 13945016-G-T | ** | |||||||
16170310-C-A | 14058430-C-A | ** | |||||||
16176708-T-C | 14064828-T-C | ** | |||||||
16220919-T-C | 14109039-T-C | ** | |||||||
16451579-A-C | 14339699-A-C | ** | |||||||
16621096-G-T | 14509216-G-T | ** | |||||||
16624001-T-C | 14512121-T-C | ** | |||||||
16720511-T-A | 14608631-T-A | ** | |||||||
16724798-G-T | 14612918-G-T | ** | |||||||
16738186-C-A | 14626306-C-A | ** | |||||||
16847602-G-C | 14735722-G-C | ** | |||||||
17006293-C-A | 14894413-C-A | ** | |||||||
17006342-C-A | 14894462-C-A | ** | |||||||
17095454-T-C | 14983574-T-C | ** | |||||||
17125789-GA-G | 15013909-GA-G | ** | |||||||
17155039-C-A | 15043159-C-A | ** | |||||||
17370747-C-A | 15258867-C-A | ** | |||||||
17425150-C-A | 15313270-C-A | ** | |||||||
17502950-G-T | 15391070-G-T | ** | |||||||
17504045-C-T | 15392165-C-T | ** | |||||||
17545622-G-T | 15433742-G-T | ** | |||||||
17932099-C-T | 15820219-C-T | ** | |||||||
18035825-C-G | 15923945-C-G | ** | |||||||
18035832-T-C | 15923952-T-C | FGC53922 | ** | ||||||
18035839-G-A | 15923959-G-A | FT2049 | ** | ||||||
18035844-ACTTT-A | 15923964-ACTTT-A | ** | |||||||
18143717-G-A | 16031837-G-A | ** | |||||||
18195994-T-G | 16084114-T-G | ** | |||||||
18390118-G-A | 16278238-G-A | FT396342 | P6_Gap | ** | |||||
18751545-G-T | 16639665-G-T | ** | |||||||
18819076-G-A | 16707196-G-A | FT134529 | ** | ||||||
18853465-C-A | 16741585-C-A | ** | |||||||
19071852-C-A | 16959972-C-A | FT5952 | ** | ||||||
19138606-C-T | 17026726-C-T | ** | |||||||
19218144-C-A | 17106264-C-A | ** | |||||||
19415708-G-A | 17303828-G-A | ** | |||||||
19642871-G-A | 17530991-G-A | P5_Prx | ** | ||||||
19690207-AAATAAAATAT-A | 17578327-AAATAAAATAT-A | P5_Prx | ** | ||||||
19938633-A-T | 17826753-A-T | P5_Prx | ** | ||||||
20506538-A-G | 18344652-A-G | P5_Dst | ** | ||||||
21088920-C-A | 18927034-C-A | ** | |||||||
21323232-C-A | 19161346-C-A | ** | |||||||
21325457-C-A | 19163571-C-A | ** | |||||||
21417192-A-T | 19255306-A-T | ** | |||||||
21862018-G-T | 19700132-G-T | ** | |||||||
22076221-C-A | 19914335-C-A | ** | |||||||
22123161-T-C | 19961275-T-C | ** | |||||||
22147778-T-A | 19985892-T-A | ** | |||||||
22218880-A-C | 20056994-A-C | DYZ19 | ** | ||||||
22240530-G-T | 20078644-G-T | DYZ19 | ** | ||||||
22252341-A-G | 20090455-A-G | DYZ19 | ** | ||||||
22316345-T-C | 20154459-T-C | DYZ19 | ** | ||||||
22690726-G-T | 20528840-G-T | ** | |||||||
22732671-C-A | 20570785-C-A | ** | |||||||
22778172-T-C | 20616286-T-C | ** | |||||||
22816197-A-G | 20654311-A-G | ** | |||||||
22816212-T-A | 20654326-T-A | ** | |||||||
22816252-G-A | 20654366-G-A | ** | |||||||
23096653-C-A | 20934767-C-A | ** | |||||||
23100163-T-C | 20938277-T-C | ** | |||||||
23142376-C-A | 20980490-C-A | ** | |||||||
23185405-A-T | 21023519-A-T | ** | |||||||
23262764-C-A | 21100878-C-A | ** | |||||||
23276668-C-A | 21114782-C-A | ** | |||||||
23319275-G-T | 21157389-G-T | ** | |||||||
23320257-G-A | 21158371-G-A | ** | |||||||
23337224-T-C | 21175338-T-C | ** | |||||||
23464885-T-C | 21302999-T-C | ** | |||||||
23512298-T-C | 21350412-T-C | ** | |||||||
24013847-CTATATATATATATATATATA-C | 21867700-CTATATATATATATATATATA-C | 21×TA | ** | ||||||
24271377-A-AT | 22125230-A-AT | P3_b1 | ** | ||||||
24403273-C-A | 22257126-C-A | ** | |||||||
25995138-G-T | 23848991-G-T | P1_Y1 | ** | ||||||
26022794-T-G | 23876647-T-G | P1_Y1 | ** | ||||||
26162029-T-C | 24015882-T-C | P1_Y1 | ** | ||||||
28479022-C-A | 26332875-C-A | ** | |||||||
28500947-A-G | 26354800-A-G | ** | |||||||
28505169-C-A | 26359022-C-A | ** | |||||||
28529852-C-A | 26383705-C-A | ** | |||||||
28546822-A-G | 26400675-A-G | FT27116 | ** | ||||||
28643075-G-T | 26496928-G-T | ** | |||||||
28736985-G-T | 26590838-G-T | ** | |||||||
28811877-A-T | 26665730-A-T | ** | |||||||
26621-C-A | ** | ||||||||
18593581-G-A | 16481701-G-A | FT229392 | *** | ||||||
18354309-GAGAA-G | 16242429-GAGAA-G | P6_Prx | 10×AGAA | *** | |||||
58995514-A-C | 56849367-A-C | *** | |||||||
22147788-T-A | 19985902-T-A | *** | |||||||
22247754-T-C | 20085868-T-C | DYZ19 | *** | ||||||
18659020-ATG-A | 16547140-ATG-A | 8×TG | *** | ||||||
9371457-C-CATAT | 9533848-C-CATAT | 22×AT | *** | ||||||
5393297-A-G | 5525256-A-G | FT159154 | *** | ||||||
13489668-G-A | 11333992-G-A | *** | |||||||
9431595-G-T | 9593986-G-T | *** | |||||||
9431607-G-A | 9593998-G-A | *** | |||||||
56834546-A-G,T | *** | ||||||||
10954315-C-T | *** | ||||||||
18155591-C-A | 16043711-C-A | *** | |||||||
56834609-A-G | *** | ||||||||
14686087-C-A | 12574153-C-A | *** | |||||||
10935588-A-AC | *** | ||||||||
10935590-TC-T | *** | ||||||||
56835128-C-T | *** | ||||||||
10935568-A-C | *** | ||||||||
10935581-C-CCACAG | *** | ||||||||
4064045-C-A | 4196004-C-A | *** | |||||||
11015960-C-A | *** | ||||||||
10842293-G-C | *** | ||||||||
11013229-A-G | *** | ||||||||
11013235-T-A | *** | ||||||||
10842300-C-A | *** | ||||||||
17503474-CAG-C | 15391594-CAG-C | *** | |||||||
6712593-G-T | 6844552-G-T | *** | |||||||
17289670-C-A | 15177790-C-A | *** | |||||||
18078152-C-A | 15966272-C-A | *** | |||||||
21836738-CTT-C,CTTT | 19674852-CTT-C,CTTT | 15×T | *** | ||||||
15982168-GAA-G,GAAA | 13870288-GAA-G,GAAA | 15×A | *** | ||||||
7389275-C-A | 7521234-C-A | *** | |||||||
10842301-G-T | *** | ||||||||
5358805-G-T | 5490764-G-T | *** | |||||||
5957087-TATAC-T,TAC | 6089046-TATAC-T,TAC | *** | |||||||
6827110-C-A | 6959069-C-A | *** | |||||||
8501689-CTCTTCTTCT-C,CTCT | 8633648-CTCTTCTTCT-C,CTCT | 18×TCT | *** | ||||||
10912436-C-A | *** | ||||||||
13472497-C-T | 11316821-C-T | *** | |||||||
13475276-A-C | 11319600-A-C | *** | |||||||
13989118-A-G | 11868412-A-G | *** | |||||||
13989123-T-C | 11868417-T-C | Z31231 | *** | ||||||
13989125-A-G | 11868419-A-G | *** | |||||||
14529234-CAAAAAA-C | 12417435-CAAAAAA-C | 15×A | *** | ||||||
15061690-CTT-C,CTTT | 12949782-CTT-C,CTTT | 13×T | *** | ||||||
15171226-CTTTT-C,CTTTTT | 13059312-CTTTT-C,CTTTTT | 19×T | *** | ||||||
18212683-C-A | 16100803-C-A | *** | |||||||
23204998-T-A | 21043112-T-A | *** | |||||||
28792454-T-C | 26646307-T-C | *** | |||||||
56827532-CT-C | *** | ||||||||
56832539-C-AACGAT,T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.