Boggs
BigY3: 27994, FTDNA: 27994, BigY2: 27994, YFull-BigY: YF09646MDKA Birth: Scotland
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 27994 | FTDNA 27994 | BigY2 27994 |
---|---|---|---|---|---|---|---|---|---|---|
20705952-T-C | 18544066-T-C | P4_Prx | A* | *** | A* | |||||
24254964-G-A | 22108817-G-A | P3_b1 | A* | *** | A* | |||||
18276499-T-G | 16164619-T-G | P6_Prx | A* | A* | ||||||
2746186-G-A | 2878145-G-A | FT150340 | Y | Y | + | + | ** | |||
5402572-C-G | 5534531-C-G | FT386814 | + | |||||||
8288850-G-A | 8420809-G-A | ** | ||||||||
8288845-G-A | 8420804-G-A | FT29188 | ** | |||||||
5308799-TAGAGAG-T | 5440758-TAGAGAG-T | 19×AG | ** | |||||||
13946139-C-A | 11825433-C-A | ** | ||||||||
7615292-C-T | 7747251-C-T | Z25482 | ** | |||||||
22263923-T-C | 20102037-T-C | BY1896 | DYZ19 | ** | ||||||
9094444-C-A | 9256835-C-A | ** | ||||||||
26073058-CTGTG-C | 23926911-CTGTG-C | P1_Y1 | 14×TG | ** | ||||||
58994005-C-A | 56847858-C-A | ** | ||||||||
5703424-T-C | 5835383-T-C | ** | ||||||||
9936442-C-A | 10098833-C-A | ** | ||||||||
2729636-A-T | 2861595-A-T | ** | ||||||||
2729648-C-T | 2861607-C-T | 25×T | ** | |||||||
2745955-G-T | 2877914-G-T | ** | ||||||||
2772526-A-AT | 2904485-A-AT | ** | ||||||||
2973498-C-A | 3105457-C-A | ** | ||||||||
3067092-A-G | 3199051-A-G | ** | ||||||||
3067200-A-C | 3199159-A-C | ** | ||||||||
3082411-A-G | 3214370-A-G | ** | ||||||||
3082968-A-G | 3214927-A-G | ** | ||||||||
3330235-C-A | 3462194-C-A | ** | ||||||||
3331118-TA-T | 3463077-TA-T | ** | ||||||||
3389766-C-A | 3521725-C-A | ** | ||||||||
3413499-G-T | 3545458-G-T | ** | ||||||||
3501241-T-C | 3633200-T-C | ** | ||||||||
3505184-G-T | 3637143-G-T | ** | ||||||||
3522367-G-T | 3654326-G-T | ** | ||||||||
3594297-C-A | 3726256-C-A | ** | ||||||||
3594362-T-C | 3726321-T-C | ** | ||||||||
3681725-G-T | 3813684-G-T | ** | ||||||||
3696480-G-T | 3828439-G-T | ** | ||||||||
3804319-T-A | 3936278-T-A | ** | ||||||||
3814922-G-A | 3946881-G-A | FT250680 | ** | |||||||
3821981-C-A | 3953940-C-A | ** | ||||||||
3833581-G-T | 3965540-G-T | ** | ||||||||
3834565-T-A | 3966524-T-A | ** | ||||||||
3866830-G-T | 3998789-G-T | ** | ||||||||
3870556-C-A | 4002515-C-A | ** | ||||||||
3870689-C-A | 4002648-C-A | ** | ||||||||
3887580-G-T | 4019539-G-T | ** | ||||||||
3896658-G-GA | 4028617-G-GA | 8×A | ** | |||||||
3986141-T-A | 4118100-T-A | FTB18566 | ** | |||||||
3986932-C-A | 4118891-C-A | ** | ||||||||
3991933-C-A | 4123892-C-A | ** | ||||||||
4010474-T-A | 4142433-T-A | ** | ||||||||
4028291-C-A | 4160250-C-A | ** | ||||||||
4030120-A-G | 4162079-A-G | ** | ||||||||
4063956-T-C | 4195915-T-C | ** | ||||||||
4069342-T-C | 4201301-T-C | ** | ||||||||
4094262-C-A | 4226221-C-A | ** | ||||||||
4179475-C-A | 4311434-C-A | ** | ||||||||
4201865-C-A | 4333824-C-A | ** | ||||||||
4226203-G-T | 4358162-G-T | ** | ||||||||
4272642-C-A | 4404601-C-A | ** | ||||||||
4331402-G-A | 4463361-G-A | ** | ||||||||
4342906-G-T | 4474865-G-T | ** | ||||||||
4342955-G-T | 4474914-G-T | ** | ||||||||
4370918-C-A | 4502877-C-A | ** | ||||||||
4416768-T-G | 4548727-T-G | ** | ||||||||
4416865-C-A | 4548824-C-A | ** | ||||||||
4420968-G-C | 4552927-G-C | ** | ||||||||
4425497-A-G | 4557456-A-G | ** | ||||||||
4431852-C-T | 4563811-C-T | ** | ||||||||
4433358-T-G | 4565317-T-G | ** | ||||||||
4544789-GA-G | 4676748-GA-G | 9×A | ** | |||||||
4545076-TA-T | 4677035-TA-T | ** | ||||||||
4605032-C-A | 4736991-C-A | ** | ||||||||
4695160-G-T | 4827119-G-T | ** | ||||||||
4703670-T-C | 4835629-T-C | ** | ||||||||
4759862-C-A | 4891821-C-A | ** | ||||||||
4838959-G-T | 4970918-G-T | ** | ||||||||
4840113-T-G | 4972072-T-G | ** | ||||||||
4873994-C-A | 5005953-C-A | ** | ||||||||
4874279-T-C | 5006238-T-C | ** | ||||||||
4908148-C-A | 5040107-C-A | ** | ||||||||
4926356-G-T | 5058315-G-T | ** | ||||||||
4932121-G-T | 5064080-G-T | ** | ||||||||
4937039-C-A | 5068998-C-A | ** | ||||||||
5045125-T-C | 5177084-T-C | ** | ||||||||
5112703-G-T | 5244662-G-T | FT12090 | ** | |||||||
5186664-A-G | 5318623-A-G | ** | ||||||||
5187198-C-A | 5319157-C-A | ** | ||||||||
5191758-C-A | 5323717-C-A | ** | ||||||||
5201897-C-A | 5333856-C-A | ** | ||||||||
5204597-C-A | 5336556-C-A | ** | ||||||||
5248964-T-C | 5380923-T-C | ** | ||||||||
5249063-G-T | 5381022-G-T | ** | ||||||||
5294955-G-T | 5426914-G-T | ** | ||||||||
5295177-G-T | 5427136-G-T | ** | ||||||||
5295764-A-G | 5427723-A-G | ** | ||||||||
5295782-A-G | 5427741-A-G | ** | ||||||||
5310400-C-A | 5442359-C-A | ** | ||||||||
5335885-T-A | 5467844-T-A | ** | ||||||||
5346921-G-T | 5478880-G-T | ** | ||||||||
5367687-C-A | 5499646-C-A | ** | ||||||||
5381134-T-C | 5513093-T-C | ** | ||||||||
5381142-G-T | 5513101-G-T | ** | ||||||||
5381145-C-T | 5513104-C-T | ** | ||||||||
5459932-C-A | 5591891-C-A | ** | ||||||||
5524122-C-A | 5656081-C-A | ** | ||||||||
5524917-CA-C | 5656876-CA-C | 9×A | ** | |||||||
5534491-C-A | 5666450-C-A | ** | ||||||||
5589703-C-A | 5721662-C-A | ** | ||||||||
5607776-G-T | 5739735-G-T | ** | ||||||||
5650254-G-T | 5782213-G-T | ** | ||||||||
5658209-T-A | 5790168-T-A | ** | ||||||||
5662501-C-A | 5794460-C-A | ** | ||||||||
5683907-G-T | 5815866-G-T | ** | ||||||||
5742790-C-A | 5874749-C-A | FT324935 | ** | |||||||
5775753-A-G | 5907712-A-G | FT114670 | ** | |||||||
5824955-T-C | 5956914-T-C | ** | ||||||||
5852611-T-C | 5984570-T-C | ** | ||||||||
5863062-G-T | 5995021-G-T | ** | ||||||||
5924428-A-C | 6056387-A-C | ** | ||||||||
5979570-G-T | 6111529-G-T | ** | ||||||||
6092425-T-C | 6224384-T-C | FT352060 | ** | |||||||
6148609-T-A | 6280568-T-A | IR3_Dst | ** | |||||||
6275280-A-G | 6407239-A-G | IR3_Dst | ** | |||||||
6277754-C-CTA | 6409713-C-CTA | IR3_Dst | ** | |||||||
6303640-T-C | 6435599-T-C | IR3_Dst | ** | |||||||
6460106-C-A | 6592065-C-A | ** | ||||||||
6460136-C-A | 6592095-C-A | ** | ||||||||
6541475-C-A | 6673434-C-A | FTA35611 | 17×AG | ** | ||||||
6596315-T-C | 6728274-T-C | ** | ||||||||
6756814-C-A | 6888773-C-A | ** | ||||||||
6776132-C-A | 6908091-C-A | ** | ||||||||
6790238-G-A | 6922197-G-A | ** | ||||||||
6807095-C-G | 6939054-C-G | ** | ||||||||
6828690-C-A | 6960649-C-A | ** | ||||||||
6831928-C-A | 6963887-C-A | ** | ||||||||
6911397-C-T | 7043356-C-T | ** | ||||||||
6918527-C-T | 7050486-C-T | ** | ||||||||
6977343-C-A | 7109302-C-A | ** | ||||||||
7021058-A-G | 7153017-A-G | ** | ||||||||
7030489-A-C | 7162448-A-C | ** | ||||||||
7040961-C-T | 7172920-C-T | ** | ||||||||
7053928-A-C | 7185887-A-C | ** | ||||||||
7114468-TTCC-T | 7246427-TTCC-T | ** | ||||||||
7114924-A-T | 7246883-A-T | ** | ||||||||
7117292-C-T | 7249251-C-T | ** | ||||||||
7186659-C-A | 7318618-C-A | ** | ||||||||
7221452-C-A | 7353411-C-A | ** | ||||||||
7243621-G-T | 7375580-G-T | ** | ||||||||
7254698-A-T | 7386657-A-T | ** | ||||||||
7296040-CA-C | 7427999-CA-C | 9×A | ** | |||||||
7341406-C-A | 7473365-C-A | ** | ||||||||
7342419-G-T | 7474378-G-T | ** | ||||||||
7360567-T-TAA | 7492526-T-TAA | 13×A | ** | |||||||
7424483-A-C | 7556442-A-C | ** | ||||||||
7536407-C-T | 7668366-C-T | FGC15825 | ** | |||||||
7536412-G-A | 7668371-G-A | ** | ||||||||
7541505-C-T | 7673464-C-T | ** | ||||||||
7572965-C-T | 7704924-C-T | ** | ||||||||
7573009-T-C | 7704968-T-C | ** | ||||||||
7645429-C-A | 7777388-C-A | ** | ||||||||
7650390-C-A | 7782349-C-A | ** | ||||||||
7897099-G-T | 8029058-G-T | ** | ||||||||
7935851-C-A | 8067810-C-A | ** | ||||||||
8016938-C-T | 8148897-C-T | 25×T | ** | |||||||
8061859-C-A | 8193818-C-A | ** | ||||||||
8090921-T-C | 8222880-T-C | Y85815 | ** | |||||||
8181385-C-CG | 8313344-C-CG | ** | ||||||||
8288855-G-A | 8420814-G-A | ** | ||||||||
8314343-G-T | 8446302-G-T | ** | ||||||||
8739633-T-G | 8871592-T-G | ** | ||||||||
8807504-C-A | 8939463-C-A | ** | ||||||||
9056468-A-C | ** | |||||||||
9403139-G-A | 9565530-G-A | ** | ||||||||
9515000-C-A | 9677391-C-A | ** | ||||||||
9908537-G-T | 10070928-G-T | ** | ||||||||
9916041-G-C | 10078432-G-C | ** | ||||||||
9936572-C-A | 10098963-C-A | ** | ||||||||
9938649-C-A | 10101040-C-A | ** | ||||||||
9979119-C-A | 10141510-C-A | ** | ||||||||
9990986-C-A | 10153377-C-A | ** | ||||||||
10011227-G-T | 10173618-G-T | ** | ||||||||
10044100-C-A | 10206491-C-A | ** | ||||||||
10046669-T-C | 10209060-T-C | ** | ||||||||
10056967-T-A | 10219358-T-A | ** | ||||||||
10067225-A-T | 10229616-A-T | ** | ||||||||
10067227-T-TC | 10229618-T-TC | ** | ||||||||
10070137-G-T | 10232528-G-T | ** | ||||||||
10652901-A-G | ** | |||||||||
10664395-A-T | ** | |||||||||
10665754-A-T | ** | |||||||||
10665756-C-T | ** | |||||||||
10668855-C-A | ** | |||||||||
10684901-C-A | ** | |||||||||
10686770-G-T | ** | |||||||||
10691927-C-A | ** | |||||||||
10749319-C-A | ** | |||||||||
10749375-T-A | ** | |||||||||
10767131-C-T | ** | |||||||||
10767145-C-T | ** | |||||||||
10770296-C-T | FT430439 | ** | ||||||||
10770301-A-C | ** | |||||||||
10770302-A-G | ** | |||||||||
10770308-C-A | ** | |||||||||
10770334-T-C | ** | |||||||||
10770346-C-A | ** | |||||||||
10783815-T-A | ** | |||||||||
10783819-T-C | ** | |||||||||
10783825-A-C | ** | |||||||||
10783828-C-G | ** | |||||||||
10783834-T-C | ** | |||||||||
10785309-A-C | ** | |||||||||
10785329-AATCCT-A | ** | |||||||||
10785736-C-A | ** | |||||||||
10785777-A-C | ** | |||||||||
10785796-C-T | ** | |||||||||
10785817-A-T | ** | |||||||||
10785840-C-CCATCG | ** | |||||||||
10790870-C-T | ** | |||||||||
10794301-T-TTCCAA | ** | |||||||||
10794339-G-T | ** | |||||||||
10806599-T-C | ** | |||||||||
10807140-C-A | ** | |||||||||
10815662-G-T | ** | |||||||||
10815708-T-C | ** | |||||||||
10833425-T-A | ** | |||||||||
10849301-C-A | ** | |||||||||
10849764-C-T | ** | |||||||||
10852780-A-T | ** | |||||||||
10857789-A-G | FT434292 | ** | ||||||||
10858492-C-A | ** | |||||||||
10860288-T-C | ** | |||||||||
10860290-C-G | ** | |||||||||
10860295-C-A | ** | |||||||||
10860298-T-C | ** | |||||||||
10860300-C-CAA | ** | |||||||||
10860302-T-TC | ** | |||||||||
10860497-C-A | ** | |||||||||
10865432-C-A | ** | |||||||||
10868089-C-A | ** | |||||||||
10870101-C-T | ** | |||||||||
10875344-A-G | FT371310 | ** | ||||||||
10878763-C-A | ** | |||||||||
10893338-C-G | ** | |||||||||
10893476-T-A | ** | |||||||||
10903516-T-C | ** | |||||||||
10915229-G-T | ** | |||||||||
10928240-A-T | ** | |||||||||
10928270-T-C | ** | |||||||||
10929409-A-G | ** | |||||||||
10935636-C-A | ** | |||||||||
10935645-T-G | ** | |||||||||
10935648-T-A | ** | |||||||||
10935656-G-T | FT65931 | ** | ||||||||
10935663-C-T | ** | |||||||||
10935674-A-C | ** | |||||||||
10935677-A-C | ** | |||||||||
10935909-C-A | ** | |||||||||
10937647-T-C | ** | |||||||||
10937667-C-G | ** | |||||||||
10939377-C-T | ** | |||||||||
10947114-C-A | ** | |||||||||
10953199-C-A | ** | |||||||||
10963000-C-A | ** | |||||||||
10963220-T-C | ** | |||||||||
10967555-T-C | ** | |||||||||
10967557-A-G | ** | |||||||||
10969591-C-A | ** | |||||||||
10976066-C-A | ** | |||||||||
10976076-A-G | ** | |||||||||
10987659-C-A | ** | |||||||||
10991089-C-T | ** | |||||||||
10996282-C-A | ** | |||||||||
11008628-C-T | ** | |||||||||
11011941-A-T | ** | |||||||||
11011946-A-GTTCTG | ** | |||||||||
11022552-C-A | ** | |||||||||
11028141-A-G | ** | |||||||||
11032254-G-A | ** | |||||||||
11032255-G-A | ** | |||||||||
11032264-C-T | ** | |||||||||
11032267-C-T | ** | |||||||||
11032285-A-G | ** | |||||||||
13214166-C-A | 11058490-C-A | ** | ||||||||
13226411-C-A | 11070735-C-A | ** | ||||||||
13229803-C-A | 11074127-C-A | ** | ||||||||
13237948-C-A | 11082272-C-A | ** | ||||||||
13239802-A-T | 11084126-A-T | ** | ||||||||
13244814-C-A | 11089138-C-A | ** | ||||||||
13255261-C-A | 11099585-C-A | ** | ||||||||
13268929-C-T | 11113253-C-T | ** | ||||||||
13283076-C-A | 11127400-C-A | ** | ||||||||
13315398-C-A | 11159722-C-A | ** | ||||||||
13328884-C-A | 11173208-C-A | ** | ||||||||
13330430-C-A | 11174754-C-A | ** | ||||||||
13422833-C-A | 11267157-C-A | ** | ||||||||
13427387-G-A | 11271711-G-A | ** | ||||||||
13460756-G-T | 11305080-G-T | ** | ||||||||
13504761-A-G | 11349085-A-G | ** | ||||||||
13570672-C-A | 11414996-C-A | ** | ||||||||
13579531-C-CA | 11423855-C-CA | 23×A | ** | |||||||
13588291-G-C | 11432615-G-C | ** | ||||||||
13596182-C-A | 11440506-C-A | ** | ||||||||
13734346-A-G | 11578670-A-G | DYZ17 | ** | |||||||
11655153-A-G | DYZ17 | ** | ||||||||
11664792-A-G | DYZ17 | ** | ||||||||
11668809-A-G | DYZ17 | ** | ||||||||
11669738-C-A | DYZ17 | ** | ||||||||
13850265-AGGAATGGAATGGAATGGAAT-A | 11729559-AGGAATGGAATGGAATGGAAT-A | DYZ17 | 15×GGAAT | ** | *** | |||||
13879963-G-T | 11759257-G-T | ** | ||||||||
13891974-C-A | 11771268-C-A | ** | ||||||||
13945952-C-A | 11825246-C-A | Z41397 Y27744 | ** | |||||||
13948983-G-T | 11828277-G-T | ** | ||||||||
13949287-G-A | 11828581-G-A | ** | ||||||||
13997718-C-A | 11877012-C-A | ** | ||||||||
14017410-C-A | 11896704-C-A | ** | ||||||||
14053241-G-T | 11932535-G-T | ** | ||||||||
14067130-C-A | 11946424-C-A | ** | ||||||||
14168135-C-A | 12047429-C-A | ** | ||||||||
14427243-C-A | 12306518-C-A | ** | ||||||||
14432027-T-C | 12311300-T-C | ** | ||||||||
14493373-C-A | 12381570-C-A | ** | ||||||||
14493429-T-G | 12381626-T-G | ** | ||||||||
14526618-T-G | 12414819-T-G | ** | ||||||||
14531170-A-T | 12419371-A-T | ** | ||||||||
14533337-C-A | 12421538-C-A | ** | ||||||||
14605389-C-A | 12493591-C-A | ** | ||||||||
14605948-G-A | 12494150-G-A | ** | ||||||||
14608103-C-A | 12496305-C-A | ** | ||||||||
14649385-C-A | 12537450-C-A | ** | ||||||||
14676040-A-G | 12564106-A-G | ** | ||||||||
14715364-G-T | 12603431-G-T | ** | ||||||||
14716933-T-G | 12605001-T-G | ** | ||||||||
14736308-C-A | 12624376-C-A | ** | ||||||||
14960093-C-A | 12848168-C-A | ** | ||||||||
14992664-G-A | 12880749-G-A | ** | ||||||||
15080967-A-T | 12969057-A-T | ** | ||||||||
15171446-T-C | 13059532-T-C | ** | ||||||||
15179063-C-A | 13067149-C-A | ** | ||||||||
15189554-C-A | 13077640-C-A | ** | ||||||||
15210907-A-C | 13098993-A-C | ** | ||||||||
15321328-GTTTTTTT-G | 13209446-GTTTTTTT-G | 25×T | ** | |||||||
15424197-C-T | 13312317-C-T | FTB3289 | ** | |||||||
15424205-G-A | 13312325-G-A | ** | ||||||||
15424209-C-G | 13312329-C-G | ** | ||||||||
15424243-A-T | 13312363-A-T | ** | ||||||||
15442512-C-A | 13330632-C-A | ** | ||||||||
15533575-C-A | 13421695-C-A | ** | ||||||||
15606463-C-A | 13494583-C-A | ** | ||||||||
15735636-A-C | 13623756-A-C | ** | ||||||||
15745738-A-C | 13633858-A-C | ** | ||||||||
15749247-C-A | 13637367-C-A | ** | ||||||||
15788986-A-G | 13677106-A-G | ** | ||||||||
15894430-C-A | 13782550-C-A | ** | ||||||||
15922522-G-T | 13810642-G-T | ** | ||||||||
16001625-C-G | 13889745-C-G | ** | ||||||||
16004880-G-T | 13893000-G-T | ** | ||||||||
16016134-G-T | 13904254-G-T | ** | ||||||||
16029311-G-C | 13917431-G-C | ** | ||||||||
16099815-T-A | 13987935-T-A | P8_Prx | ** | |||||||
16099965-G-T | 13988085-G-T | P8_Prx | ** | |||||||
16323349-G-C | 14211469-G-C | Y69662 | ** | |||||||
16323353-C-T | 14211473-C-T | ** | ||||||||
16354035-C-A | 14242155-C-A | ** | ||||||||
16379241-C-A | 14267361-C-A | ** | ||||||||
16427349-T-A | 14315469-T-A | ** | ||||||||
16428995-T-C | 14317115-T-C | ** | ||||||||
16465457-C-A | 14353577-C-A | ** | ||||||||
16516293-C-T | 14404413-C-T | ** | ||||||||
16636482-A-G | 14524602-A-G | ** | ||||||||
16926154-C-T | 14814274-C-T | ** | ||||||||
16930852-G-T | 14818972-G-T | ** | ||||||||
17027450-G-C | 14915570-G-C | ** | ||||||||
17065082-C-A | 14953202-C-A | ** | ||||||||
17087975-C-A | 14976095-C-A | ** | ||||||||
17137000-C-A | 15025120-C-A | ** | ||||||||
17426714-A-G | 15314834-A-G | ** | ||||||||
17503901-G-T | 15392021-G-T | ** | ||||||||
17547857-C-A | 15435977-C-A | ** | ||||||||
17601111-TG-T | 15489231-TG-T | ** | ||||||||
17617224-C-A | 15505344-C-A | ** | ||||||||
17886304-C-A | 15774424-C-A | ** | ||||||||
17930848-C-A | 15818968-C-A | ** | ||||||||
17963780-C-T | 15851900-C-T | ** | ||||||||
18089194-A-C | 15977314-A-C | ** | ||||||||
18188000-C-A | 16076120-C-A | ** | ||||||||
18352072-T-G | 16240192-T-G | P6_Prx | ** | |||||||
18401199-C-CAA | 16289319-C-CAA | P6_Gap | 30×A | ** | ||||||
18504915-G-T | 16393035-G-T | P6_Dst | ** | |||||||
18580122-C-G | 16468242-C-G | ** | ||||||||
18580187-A-G | 16468307-A-G | ** | ||||||||
18626258-T-A | 16514378-T-A | ** | ||||||||
18707318-C-A | 16595438-C-A | ** | ||||||||
18789715-T-C | 16677835-T-C | ** | ||||||||
18818121-C-A | 16706241-C-A | ** | ||||||||
18869739-C-A | 16757859-C-A | ** | ||||||||
18968486-A-G | 16856606-A-G | ** | ||||||||
18968488-T-G | 16856608-T-G | ** | ||||||||
18968497-T-C | 16856617-T-C | ** | ||||||||
18968512-T-C | 16856632-T-C | ** | ||||||||
18968519-G-A | 16856639-G-A | ** | ||||||||
18968528-C-A | 16856648-C-A | ** | ||||||||
19031390-T-G | 16919510-T-G | ** | ||||||||
19031416-T-A | 16919536-T-A | ** | ||||||||
19052346-T-A | 16940466-T-A | ** | ||||||||
19052414-C-A | 16940534-C-A | 24×A | ** | |||||||
19130770-TTG-T | 17018890-TTG-T | ** | ||||||||
19417622-T-A | 17305742-T-A | ** | ||||||||
19424782-T-C | 17312902-T-C | ** | ||||||||
19448321-A-T | 17336441-A-T | ** | ||||||||
19509980-C-A | 17398100-C-A | ** | ||||||||
19558912-T-C | 17447032-T-C | ** | ||||||||
19612067-A-T | 17500187-A-T | P5_Prx | ** | |||||||
19740663-T-TC | 17628783-T-TC | P5_Prx | ** | |||||||
19810374-T-A | 17698494-T-A | P5_Prx | ** | |||||||
19820071-A-G | 17708191-A-G | P5_Prx | ** | |||||||
20004011-C-A | 17892131-C-A | P5_Prx | ** | |||||||
20084501-T-TC | 17972621-T-TC | P5_Dst | ** | |||||||
20230153-A-AAG | 18068267-A-AAG | P5_Dst | ** | |||||||
21042133-C-A | 18880247-C-A | ** | ||||||||
21042201-TG-T | 18880315-TG-T | ** | ||||||||
21072778-C-A | 18910892-C-A | ** | ||||||||
21202092-G-T | 19040206-G-T | ** | ||||||||
21208815-C-G | 19046929-C-G | ** | ||||||||
21211240-T-C | 19049354-T-C | ** | ||||||||
21323089-A-G | 19161203-A-G | ** | ||||||||
21325532-C-A | 19163646-C-A | ** | ||||||||
21350895-G-A | 19189009-G-A | ** | ||||||||
21351270-A-G | 19189384-A-G | ** | ||||||||
21351304-A-G | 19189418-A-G | ** | ||||||||
21351317-T-G | 19189431-T-G | ** | ||||||||
21362048-G-T | 19200162-G-T | ** | ||||||||
21383258-C-A | 19221372-C-A | ** | ||||||||
21386974-A-G | 19225088-A-G | ** | ||||||||
21584110-G-T | 19422224-G-T | ** | ||||||||
21602815-C-A | 19440929-C-A | ** | ||||||||
21677427-C-A | 19515541-C-A | ** | ||||||||
21681701-G-A | 19519815-G-A | ** | ||||||||
21742952-C-G | 19581066-C-G | ** | ||||||||
21880957-G-C | 19719071-G-C | ** | ||||||||
21913792-T-C | 19751906-T-C | ** | ||||||||
22050866-G-T | 19888980-G-T | ** | ||||||||
22124383-T-A | 19962497-T-A | ** | ||||||||
22181850-C-A | 20019964-C-A | ** | ||||||||
22287088-C-T | 20125202-C-T | DYZ19 | ** | |||||||
22345992-T-A | 20184106-T-A | DYZ19 | ** | |||||||
22551221-A-G | 20389335-A-G | ** | ||||||||
22668623-C-G | 20506737-C-G | ** | ||||||||
22809343-C-A | 20647457-C-A | ** | ||||||||
22809629-T-C | 20647743-T-C | ** | ||||||||
22857464-T-G | 20695578-T-G | ** | ||||||||
23062375-C-A | 20900489-C-A | ** | ||||||||
23062419-C-A | 20900533-C-A | ** | ||||||||
23084452-G-T | 20922566-G-T | ** | ||||||||
23096855-A-T | 20934969-A-T | ** | ||||||||
23127693-C-A | 20965807-C-A | ** | ||||||||
23184407-T-A | 21022521-T-A | ** | ||||||||
23321395-G-C | 21159509-G-C | ** | ||||||||
23360915-A-G | 21199029-A-G | ** | ||||||||
23372959-C-A | 21211073-C-A | ** | ||||||||
23419273-C-A | 21257387-C-A | ** | ||||||||
23425395-C-CA | 21263509-C-CA | ** | ||||||||
23801717-G-A | 21639831-G-A | ** | ||||||||
21753160-C-A | ** | |||||||||
21754068-G-A | ** | |||||||||
21780512-C-A | ** | |||||||||
23954089-A-G | 21807942-A-G | ** | ||||||||
24148949-C-A | 22002802-C-A | P3_b1 | ** | |||||||
24290759-A-ACG | 22144612-A-ACG | P3_t1 | ** | |||||||
25524751-A-G | 23378604-A-G | P1_gr1 | ** | |||||||
25733066-G-A | 23586919-G-A | P1_b3 | ** | |||||||
25945186-T-G | 23799039-T-G | P1_Y1 | ** | |||||||
26013010-T-TG | 23866863-T-TG | P1_Y1 | ** | |||||||
26040885-A-G | 23894738-A-G | P1_Y1 | ** | |||||||
26249267-A-T | 24103120-A-T | P1_Y1 | ** | |||||||
26249387-A-AG | 24103240-A-AG | P1_Y1 | ** | |||||||
26355301-C-T | 24209154-C-T | P1_Y1 | ** | |||||||
26422573-G-T | 24276426-G-T | P1_Y1 | ** | |||||||
26593012-C-A | 24446865-C-A | P1_g2 | ** | |||||||
27607135-G-T | 25460988-G-T | P1_Y2 | ** | |||||||
27935988-C-A | 25789841-C-A | P1_Y2 | ** | |||||||
28432106-C-A | 26285959-C-A | P1_gr2 | ** | |||||||
28471086-G-T | 26324939-G-T | ** | ||||||||
28523929-G-T | 26377782-G-T | ** | ||||||||
28535504-T-C | 26389357-T-C | ** | ||||||||
28582915-C-A | 26436768-C-A | ** | ||||||||
28649189-C-A | 26503042-C-A | ** | ||||||||
28656236-C-A | 26510089-C-A | ** | ||||||||
28688358-C-A | 26542211-C-A | ** | ||||||||
28689279-C-A | 26543132-C-A | ** | ||||||||
28699564-C-G | 26553417-C-G | ** | ||||||||
28708944-C-A | 26562797-C-A | ** | ||||||||
28724079-C-G | 26577932-C-G | ** | ||||||||
28748690-G-T | 26602543-G-T | ** | ||||||||
28776468-G-A | 26630321-G-A | ** | ||||||||
56724792-T-G | ** | |||||||||
56724796-A-C | ** | |||||||||
56724798-G-C | ** | |||||||||
56724804-G-A | ** | |||||||||
56724812-T-C | ** | |||||||||
56724821-A-C | ** | |||||||||
56724823-G-C | ** | |||||||||
56724843-G-C | ** | |||||||||
56756814-G-C | ** | |||||||||
56845133-C-T | ** | |||||||||
56848601-A-T | ** | |||||||||
56848865-C-A | ** | |||||||||
56850627-C-A | ** | |||||||||
56850640-T-C | ** | |||||||||
56886054-C-A | ** | |||||||||
33970-G-A | ** | |||||||||
33974-C-T | ** | |||||||||
13468017-A-G | 11312341-A-G | ** | ||||||||
13468033-G-A | 11312357-G-A | ** | ||||||||
13468061-G-A | 11312385-G-A | ** | ||||||||
13468063-T-A | 11312387-T-A | ** | ||||||||
13468068-T-G | 11312392-T-G | ** | ||||||||
13468087-G-T | 11312411-G-T | ** | ||||||||
13459545-C-GGGTTA | 11303869-C-GGGTTA | ** | ||||||||
13468879-G-C | 11313203-G-C | ** | ||||||||
13468913-T-A | 11313237-T-A | ** | ||||||||
13468926-CT-C | 11313250-CT-C | ** | ||||||||
22263905-T-C | 20102019-T-C | DYZ19 | ** | |||||||
19155235-A-G | 17043355-A-G | ** | ||||||||
19892817-G-T | 17780937-G-T | P5_Prx | ** | |||||||
19892812-C-A | 17780932-C-A | P5_Prx | ** | |||||||
13459161-C-CGGATG | 11303485-C-CGGATG | ** | ||||||||
3543133-C-A | 3675092-C-A | ** | ||||||||
4076302-T-A | 4208261-T-A | ** | ||||||||
5346444-C-A | 5478403-C-A | ** | ||||||||
6009809-G-A | 6141768-G-A | ** | ||||||||
9923823-G-A | 10086214-G-A | ** | ||||||||
13365865-G-A | 11210189-G-A | ** | ||||||||
13467998-G-T | 11312322-G-T | ** | ||||||||
13481910-A-AT | 11326234-A-AT | ** | ||||||||
15142869-C-T | 13030956-C-T | ** | ||||||||
16683563-A-C | 14571683-A-C | ** | ||||||||
16971933-G-A | 14860053-G-A | FT264311 | ** | |||||||
18054748-T-C | 15942868-T-C | ** | ||||||||
20568599-G-T | 18406713-G-T | P5_Dst | ** | |||||||
20741891-C-A | 18580005-C-A | P4_Prx | ** | |||||||
23006576-A-G | 20844690-A-G | ** | ||||||||
25633825-T-A | 23487678-T-A | P1_b3 | ** | |||||||
28568735-T-C | 26422588-T-C | ** | ||||||||
22455366-G-T | 20293480-G-T | DYZ19 | *** | |||||||
7142104-C-T | 7274063-C-T | PF1517 CTS1009 | *** | *** | ||||||
13489629-CCACCCA-C,GCAACC | 11333953-CCACCCA-C,GCAACC | *** | ||||||||
13450106-CCACTCCACCCCATCCCATCCCATTCTATTCCATTC-C,CCACTCCACTCCATTCCATTCCATTCCATTCCATTT | 11294430-CCACTCCACCCCATCCCATCCCATTCTATTCCATTC-C,CCACTCCACTCCATTCCATTCCATTCCATTCCATTT | *** | ||||||||
13447142-CATTCCATTCCATTCT-C,CATTCCATTCTATTCT | 11291466-CATTCCATTCCATTCT-C,CATTCCATTCTATTCT | *** | ||||||||
2798710-ATTTTT-A,ATTTTTT | 2930669-ATTTTT-A,ATTTTTT | 20×T | *** | |||||||
2974294-TA-T | 3106253-TA-T | 9×A | *** | |||||||
5213967-A-G | 5345926-A-G | *** | ||||||||
5537750-T-C | 5669709-T-C | *** | ||||||||
5867401-C-A | 5999360-C-A | *** | ||||||||
6699137-T-G | 6831096-T-G | *** | ||||||||
9171588-G-T | 9333979-G-T | *** | ||||||||
10691347-CATTCCATTCCATTCCATTCCATTCCA-C,CATTCCAATCCATTCCATTGCATTCCA | *** | |||||||||
10757660-C-A | *** | |||||||||
10785243-C-T | *** | |||||||||
10785250-T-A | *** | |||||||||
10785254-ATTCCG-A | *** | |||||||||
11003753-C-CACTTG | *** | |||||||||
13489597-C-A | 11333921-C-A | *** | ||||||||
13507157-G-C | 11351481-G-C | *** | ||||||||
13809441-A-G | 11688735-A-G | FT96304 | DYZ17 | *** | ||||||
14184222-T-C | 12063516-T-C | *** | ||||||||
14266959-C-A | 12146253-C-A | *** | ||||||||
15374441-GT-G,GTT | 13262561-GT-G,GTT | 20×T | *** | |||||||
15572586-GA-G | 13460706-GA-G | 9×A | *** | |||||||
16848506-C-A | 14736626-C-A | *** | ||||||||
18848493-G-A | 16736613-G-A | *** | ||||||||
19183351-ATTT-A,ATT | 17071471-ATTT-A,ATT | 18×T | *** | |||||||
21146275-CTTT-C,CTTTT | 18984389-CTTT-C,CTTTT | 17×T | *** | |||||||
23544846-CTTT-C | 21382960-CTTT-C | 15×T | *** | |||||||
56835402-AGTACA-A,AGTACG | *** | |||||||||
16115-G-A | *** | |||||||||
13468107-GC-G | 11312431-GC-G | *** | ||||||||
18147509-CTTTT-C | 16035629-CTTTT-C | 28×T | *** | |||||||
13453432-T-A | 11297756-T-A | *** | ||||||||
17458930-ATT-A,AT | 15347050-ATT-A,AT | 17×T | *** | |||||||
13468997-G-T | 11313321-G-T | *** | ||||||||
13468096-T-C | 11312420-T-C | *** | ||||||||
14620753-T-G | 12508951-T-G | *** | ||||||||
7160933-G-A | 7292892-G-A | *** | ||||||||
14146642-GTATA-G | 12025936-GTATA-G | 8×TA | *** | |||||||
13468971-T-G | 11313295-T-G | *** | ||||||||
13166915-TTTATA-T | 7×TTATA | *** | ||||||||
6074688-ATGTGTG-A | 6206647-ATGTGTG-A | 22×TG | *** | |||||||
17604931-GTT-G,GTTT | 15493051-GTT-G,GTTT | 24×T | *** | |||||||
2718881-CTTTT-C,CTTT | 2850840-CTTTT-C,CTTT | 21×T | *** | |||||||
15919459-G-GT | 13807579-G-GT | 9×T | *** | |||||||
13449749-CATTC-C,CATTA | 11294073-CATTC-C,CATTA | *** | ||||||||
19231319-CT-C,CTT | 17119439-CT-C,CTT | 24×T | *** | |||||||
3125247-C-A | 3257206-C-A | *** | ||||||||
5225258-A-G | 5357217-A-G | *** | ||||||||
6146424-C-CTA | 6278383-C-CTA | IR3_Dst | *** | |||||||
13608647-CAAAAAAA-C,CAAAAAAAA | 11452971-CAAAAAAA-C,CAAAAAAAA | 27×A | *** | |||||||
18119922-C-T | 16008042-C-T | *** | ||||||||
28522751-C-CT,CTT | 26376604-C-CT,CTT | 17×T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.