Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > ZZ40 > Y11219 > FGC2094

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N87857
BigY2
N87857
18325818-C-G 16213938-C-G P6_Prx ***A*
19584575-C-T 17472695-C-T P5_Prx Y***A*
19781239-A-C 17669359-A-C P5_Prx ***A*
19908359-C-G 17796479-C-G P5_Prx ***A*
20630616-T-C 18468730-T-C P4_Prx ***A*
22232815-C-T 20070929-C-T Y6459 DYZ19 ***A*
22305162-G-C 20143276-G-C DYZ19 ***A*
26011808-A-G 23865661-A-G P1_Y1 ***A*
26070029-G-A 23923882-G-A P1_Y1 ***A*
26142261-T-C 23996114-T-C P1_Y1 ***A*
18125771-A-G 16013891-A-G YYA*
13449861-T-G 11294185-T-G A*
19781235-G-T 17669355-G-T P5_Prx A*
19781236-T-TAGA 17669356-T-TAGA P5_Prx A*
28816764-A-C 26670617-A-C A*
6852470-G-A 6984429-G-A Y45373 YY++
7263014-T-C 7394973-T-C Y45844 YY++
8241611-T-G 8373570-T-G Y47001 YY++
8822767-T-A 8954726-T-A Y47949 YY++
9819947-TTTGA-T 9982338-TTTGA-T ++
13673957-T-A 11518281-T-A BY87936 ++
13676427-G-C 11520751-G-C BY88039 ++
14295008-G-A 12174302-G-A Y49315 YY++
14415496-G-A 12294793-G-A Y49515 YY++
14888254-T-C 12776320-T-C Y50022 YY++
15265475-A-C 13153564-A-C Y50464 YY++
15449058-T-A 13337178-T-A Y50665 YY++
15944596-T-A 13832716-T-A Y51327 YY++
16347706-G-A 14235826-G-A Y51739 YY++
16794694-A-G 14682814-A-G Y52338 YY++
17172789-G-C 15060909-G-C Y52863 YY++
17809782-C-A 15697902-C-A Y53756 YY++
19567251-C-T 17455371-C-T Y56080 Y++
19997879-A-G 17885999-A-G BY212040 P5_Prx ***+
21089363-T-C 18927477-T-C Y56208 YY++
21329206-G-A 19167320-G-A Y56542 YY++
21361051-G-T 19199165-G-T BY132337 YY++
22682187-T-C 20520301-T-C Y58137 YY++
22974983-T-C 20813097-T-C PR3866 Y58543 YY++
23238890-A-G 21077004-A-G Y58918 Y++
23324607-C-T 21162721-C-T Y59036 YY++
28716125-C-A 26569978-C-A Y59983 **+
18125759-GGAAAGAAAGAAA-G 16013879-GGAAAGAAAGAAA-G 13×GAAA+*
23144515-TA-T 20982629-TA-T 9×A++
13465012-G-A 11309336-G-A BY85711 +
20489617-AT-A 18327731-AT-A P5_Dst ****
8705215-A-G 8837174-A-G YY****
22279505-G-T 20117619-G-T Z7882 DYZ19 ****
22341038-T-C 20179152-T-C BY172323 DYZ19 ****
22345041-T-C 20183155-T-C BY172324 DYZ19 ****
22430529-G-C 20268643-G-C DYZ19 ****
22433620-G-T 20271734-G-T DYZ19 ****
13450521-CTTCACTCCAC-C,CTCCCAT 11294845-CTTCACTCCAC-C,CTCCCAT *
13850653-C-A 11729947-C-A **
6726027-G-A 6857986-G-A Z1693 CTS397 **
15798247-C-T 13686367-C-T Z1012 CTS4751 ****
18755028-C-A 16643148-C-A CTS9218 ****
27791831-TTTCTTC-T 25645684-TTTCTTC-T P1_Y2 22×TTC*****
20025477-CTCTCT-C 17913597-CTCTCT-C P5_Prx **
9524289-CTA-C 9686680-CTA-C 8×TA**
5393399-A-G 5525358-A-G **
13457805-C-A 11302129-C-A **
24884196-A-G 22738049-A-G g1 **
9962469-C-A 10124860-C-A **
14048000-C-A 11927294-C-A **
13485640-A-T 11329964-A-T **
13962073-G-A 11841367-G-A **
10839627-C-A **
4605076-C-A 4737035-C-A **
10808586-C-A **
10655058-T-G **
10655060-T-A **
26100545-G-TTT 23954398-G-TTT P1_Y1 **
4241711-C-A 4373670-C-A **
16648145-G-T 14536265-G-T **
13489470-C-A 11333794-C-A **
19271549-T-TAA 17159669-T-TAA 14×A**
10767683-C-T **
7503683-C-A 7635642-C-A IR1_L **
15988066-C-A 13876186-C-A **
15336019-C-A 13224137-C-A 30×A**
10935568-A-T **
7434000-T-G 7565959-T-G **
10935549-C-G **
21435418-T-A 19273532-T-A **
21435430-G-A 19273544-G-A **
10821851-C-A **
13480478-T-A 11324802-T-A **
13461724-T-G 11306048-T-G **
14500255-C-A 12388460-C-A **
17504995-C-A 15393115-C-A **
14272174-G-A 12151468-G-A **
4270675-C-A 4402634-C-A Y81968 **
14219556-C-A 12098850-C-A **
13487614-C-A 11331938-C-A **
10900829-C-T **
10900836-T-G **
7309966-C-A 7441925-C-A **
28506249-C-A 26360102-C-A **
16246159-C-A 14134279-C-A **
16032247-C-A 13920367-C-A **
21132648-C-A 18970762-C-A **
15399290-C-A 13287410-C-A **
10935556-C-CAGTTCTACTT **
10935598-A-G **
5690163-C-A 5822122-C-A **
10767646-CAGT-C **
10767651-TA-T **
10767678-C-T **
11645907-C-G **
5927300-G-T 6059259-G-T **
16351851-G-T 14239971-G-T **
7534570-C-A 7666529-C-A **
13480436-T-C 11324760-T-C **
19699940-A-T 17588060-A-T P5_Prx **
23317710-CA-C 21155824-CA-C **
15201631-C-A 13089717-C-A **
14405915-C-A 12285212-C-A **
10767667-AC-A **
6918529-C-T 7050488-C-T **
7028804-C-A 7160763-C-A **
24673081-G-C 22526934-G-C P3_b2 **
16678648-C-A 14566768-C-A **
7094306-C-T 7226265-C-T FGC35170 **
9983330-C-A 10145721-C-A **
10991231-G-A **
13217903-C-A 11062227-C-A **
15904147-C-A 13792267-C-A **
18653484-C-A 16541604-C-A **
5524130-C-A 5656089-C-A **
21435433-T-C 19273547-T-C **
14297874-C-A 12177168-C-A **
10950985-ACACTC-A **
23098803-T-G 20936917-T-G **
19604808-G-A 17492928-G-A P5_Prx **
7305697-C-A 7437656-C-A **
14065498-C-A 11944792-C-A **
7322995-C-A 7454954-C-A **
19000110-C-A 16888230-C-A **
13974104-C-A 11853398-C-A **
6732664-C-A 6864623-C-A **
6697258-C-A 6829217-C-A **
17023372-C-A 14911492-C-A **
7381819-C-A 7513778-C-A **
10767669-TCCAC-T **
27756329-C-A 25610182-C-A P1_Y2 **
14376507-C-A 12255803-C-A **
13457803-T-G 11302127-T-G **
21522151-C-A 19360265-C-A **
17361037-C-A 15249157-C-A **
4351398-C-T 4483357-C-T **
10775957-T-C **
21435476-T-C 19273590-T-C **
7721350-C-A 7853309-C-A FT53032 **
10809235-C-A **
7179985-C-A 7311944-C-A **
56842290-T-C **
10935621-C-T **
20352675-T-TA 18190789-T-TA P5_Dst **
14106844-C-A 11986138-C-A FT416898 **
7311906-C-A 7443865-C-A **
8075935-G-T 8207894-G-T **
10900825-A-T **
5644630-C-A 5776589-C-A **
11652589-C-A **
13298572-G-T 11142896-G-T **
14788042-C-A 12676113-C-A **
28661697-C-A 26515550-C-A FT108538 **
28773839-C-A 26627692-C-A **
21635268-T-C 19473382-T-C **
4983807-A-G 5115766-A-G **
21118639-C-A 18956753-C-A **
11666167-C-A **
15843124-CA-C 13731244-CA-C **
10828681-C-A **
5755998-G-T 5887957-G-T **
11651419-C-A FT191006 **
28583671-C-A 26437524-C-A **
23098067-C-T 20936181-C-T **
10693341-C-A **
7228452-C-A 7360411-C-A **
10034421-C-A 10196812-C-A **
2696539-T-G 2828498-T-G **
2745229-A-G 2877188-A-G **
2745998-C-A 2877957-C-A **
2774819-C-A 2906778-C-A **
2852566-C-A 2984525-C-A **
2960463-T-C 3092422-T-C **
3202849-C-CT 3334808-C-CT **
3275332-C-T 3407291-C-T **
3334828-G-T 3466787-G-T **
3437117-T-A 3569076-T-A FTB44517 9×A**
3440334-T-A 3572293-T-A **
3681348-G-T 3813307-G-T **
3741662-G-A 3873621-G-A **
3776592-G-T 3908551-G-T **
3832318-G-T 3964277-G-T **
3946914-T-C 4078873-T-C **
3965259-C-G 4097218-C-G **
3992133-G-C 4124092-G-C **
4270649-C-A 4402608-C-A **
4351449-A-G 4483408-A-G **
4353860-T-C 4485819-T-C **
4353872-A-C 4485831-A-C **
4509457-A-G 4641416-A-G **
4547870-T-A 4679829-T-A **
4580656-T-C 4712615-T-C **
4625898-G-C 4757857-G-C **
4702959-C-A 4834918-C-A **
4856521-C-A 4988480-C-A **
4900386-G-T 5032345-G-T **
5007998-A-T 5139957-A-T **
5008026-A-C 5139985-A-C **
5073927-C-A 5205886-C-A **
5143549-C-A 5275508-C-A **
5242065-A-G 5374024-A-G **
5286856-G-C 5418815-G-C **
5414512-G-T 5546471-G-T **
5449458-T-A 5581417-T-A **
5454738-C-A 5586697-C-A **
5524778-T-C 5656737-T-C **
5524786-A-T 5656745-A-T **
5535239-T-C 5667198-T-C **
5587284-A-G 5719243-A-G **
5625581-G-A 5757540-G-A **
5670162-A-C 5802121-A-C **
5682364-A-C 5814323-A-C **
5682508-C-A 5814467-C-A **
5702643-AAAG-A 5834602-AAAG-A **
5829259-T-C 5961218-T-C **
5864837-C-A 5996796-C-A **
5865527-G-C 5997486-G-C **
5881448-G-T 6013407-G-T **
5925195-C-T 6057154-C-T **
5969052-C-G 6101011-C-G **
5972719-A-G 6104678-A-G **
5996720-T-G 6128679-T-G **
6236295-C-A 6368254-C-A IR3_Dst **
6280467-A-G 6412426-A-G IR3_Dst **
6330116-A-G 6462075-A-G IR3_Dst **
6514087-A-T 6646046-A-T **
6684411-C-A 6816370-C-A **
6773192-T-C 6905151-T-C **
6826666-G-T 6958625-G-T **
6858662-C-A 6990621-C-A **
6929449-C-G 7061408-C-G **
7000269-T-G 7132228-T-G **
7002325-A-T 7134284-A-T **
7039197-C-A 7171156-C-A **
7084483-C-A 7216442-C-A **
7097905-C-A 7229864-C-A **
7140358-T-C 7272317-T-C **
7141057-G-A 7273016-G-A **
7141963-G-T 7273922-G-T **
7142412-C-T 7274371-C-T **
7152979-C-T 7284938-C-T **
7152984-C-T 7284943-C-T **
7153009-A-G 7284968-A-G **
7154856-C-G 7286815-C-G **
7179953-C-A 7311912-C-A **
7209949-A-G 7341908-A-G **
7235278-G-T 7367237-G-T **
7235331-G-T 7367290-G-T **
7238337-G-A 7370296-G-A **
7239506-G-A 7371465-G-A **
7240258-C-A 7372217-C-A **
7299624-A-G 7431583-A-G **
7311830-C-G 7443789-C-G **
7323053-C-A 7455012-C-A **
7363732-A-G 7495691-A-G **
7390646-T-A 7522605-T-A **
7422253-T-G 7554212-T-G **
7578913-C-A 7710872-C-A **
7897866-G-T 8029825-G-T **
8661274-C-A 8793233-C-A **
8669784-C-A 8801743-C-A **
8669821-C-A 8801780-C-A **
8736919-T-C 8868878-T-C **
8849716-A-T 8981675-A-T **
8854300-C-A 8986259-C-A **
8913816-C-T 9045775-C-T **
8981595-G-T 9143986-G-T **
9015806-A-G 9178197-A-G **
9369426-A-G 9531817-A-G **
9446087-C-A 9608478-C-A **
10012724-G-A 10175115-G-A **
10015018-G-A 10177409-G-A **
10022117-C-A 10184508-C-A **
10031825-C-A 10194216-C-A **
10044125-C-A 10206516-C-A **
10653750-A-G **
10662694-C-T **
10673257-C-A **
10673400-T-A **
10673479-C-A **
10677738-C-T **
10677740-C-CTCCAT **
10687094-G-T **
10771778-C-A **
10781644-CCCAGTCT-C **
10786379-T-A FTB5649 **
10799332-C-A **
10809260-C-A **
10821871-C-A **
10821986-C-A **
10829115-C-T FT433064 **
10845915-C-A FT433849 **
10864747-CCAATCCAATCCACTCCACTCCAATCTGTT-C **
10899896-C-G **
10911957-C-G **
10911979-A-T **
10926785-T-C **
10934333-C-A **
10941386-G-T **
10941389-T-C **
10941398-A-T **
10946681-C-A **
10947741-C-G **
10947792-A-C **
10951218-A-G **
10951235-T-A **
10951272-C-G FT437881 **
10959225-C-A **
10967295-T-C **
10982730-C-A **
10986715-C-A **
10994898-C-A **
11003187-T-A **
11012201-G-T **
11037952-C-T **
13198005-T-G 11042329-T-G **
13298550-A-C 11142874-A-C **
13308826-T-C 11153150-T-C **
13327114-C-A 11171438-C-A **
13422408-T-C 11266732-T-C **
13489011-C-A 11333335-C-A **
13593840-T-A 11438164-T-A **
13606331-C-A 11450655-C-A **
11647376-G-T FT227786 **
11647808-C-A **
11664585-C-A **
11669717-C-A **
11677536-T-C **
13804188-A-G 11683482-A-G **
13859900-G-C 11739194-G-C **
13871411-C-A 11750705-C-A **
13881425-C-A 11760719-C-A **
13891537-C-A 11770831-C-A **
13933092-A-C 11812386-A-C **
13946277-C-A 11825571-C-A **
13960779-C-A 11840073-C-A **
14033929-C-A 11913223-C-A **
14035254-C-A 11914548-C-A **
14042685-G-T 11921979-G-T **
14065520-T-A 11944814-T-A **
14073434-C-A 11952728-C-A **
14184298-C-A 12063592-C-A **
14250577-A-C 12129871-A-C **
14252279-C-A 12131573-C-A **
14261411-T-C 12140705-T-C **
14269776-G-T 12149070-G-T **
14272186-A-G 12151480-A-G **
14285978-C-A 12165272-C-A **
14296347-T-C 12175641-T-C **
14315437-C-A 12194731-C-A **
14324366-T-C 12203660-T-C **
14355524-T-G 12234819-T-G **
14395209-C-A 12274505-C-A **
14463316-C-A 12342589-C-A **
14554297-C-A 12442498-C-A **
14560686-A-G 12448887-A-G **
14575878-C-A 12464078-C-A **
14584635-C-A 12472835-C-A **
14602642-G-C 12490844-G-C **
14667894-C-A 12555960-C-A **
14667903-C-A 12555969-C-A **
14741602-C-A 12629670-C-A **
14755681-C-A 12643750-C-A **
14788049-C-G 12676120-C-G **
14914772-C-A 12802839-C-A **
15424796-A-G 13312916-A-G **
15477843-C-A 13365963-C-A **
15684411-A-C 13572531-A-C **
15767007-G-A 13655127-G-A **
15775387-C-A 13663507-C-A **
15790310-C-A 13678430-C-A **
15870438-T-A 13758558-T-A **
16002247-C-A 13890367-C-A **
16015259-C-A 13903379-C-A **
16017813-C-A 13905933-C-A **
16044808-G-A 13932928-G-A **
16091186-C-T 13979306-C-T **
16209781-C-A 14097901-C-A **
16209841-C-A 14097961-C-A **
16211043-A-G 14099163-A-G **
16266089-A-G 14154209-A-G **
16309286-T-C 14197406-T-C **
16464611-G-A 14352731-G-A **
16562757-G-A 14450877-G-A **
16624881-G-T 14513001-G-T **
16652848-G-A 14540968-G-A **
16665457-T-G 14553577-T-G **
16678681-C-A 14566801-C-A **
16701894-G-T 14590014-G-T **
16706867-C-A 14594987-C-A **
16729339-T-A 14617459-T-A **
17152920-G-A 15041040-G-A Y52844 **
17192879-GC-A 15080999-GC-A **
17217257-T-A 15105377-T-A **
17519702-A-C 15407822-A-C **
17655003-C-A 15543123-C-A **
18050564-T-C 15938684-T-C **
18155717-C-A 16043837-C-A **
18158616-A-G 16046736-A-G **
18186014-A-G 16074134-A-G **
18370824-A-G 16258944-A-G P6_Prx **
18370848-T-TG 16258968-T-TG P6_Prx **
18645933-C-A 16534053-C-A **
18750166-G-T 16638286-G-T FTA46316 **
18801213-C-A 16689333-C-A **
18928955-C-A 16817075-C-A **
18980601-C-A 16868721-C-A **
19031449-G-A 16919569-G-A **
19088483-C-A 16976603-C-A **
19107417-A-T 16995537-A-T **
19398178-C-A 17286298-C-A **
19524632-C-A 17412752-C-A **
19532684-T-A 17420804-T-A **
19532796-C-T 17420916-C-T **
19791332-C-T 17679452-C-T P5_Prx **
20252913-T-C 18091027-T-C P5_Dst **
20352703-AG-A 18190817-AG-A P5_Dst **
20557752-C-G 18395866-C-G P5_Dst **
20654291-T-C 18492405-T-C P4_Prx **
20694418-T-C 18532532-T-C P4_Prx **
20989065-G-C 18827179-G-C P4_Dst **
21054432-TC-T 18892546-TC-T **
21072374-A-G 18910488-A-G **
21115819-A-G 18953933-A-G **
21115864-A-G 18953978-A-G **
21136764-A-G 18974878-A-G **
21138631-A-T 18976745-A-T **
21208976-G-T 19047090-G-T **
21211747-C-A 19049861-C-A **
21308276-T-A 19146390-T-A **
21408994-A-G 19247108-A-G **
21435434-G-A 19273548-G-A **
21435440-GC-G 19273554-GC-G **
21435467-A-G 19273581-A-G **
21556941-TTGTC-T 19395055-TTGTC-T **
21737754-C-A 19575868-C-A **
21796641-G-A 19634755-G-A **
21846660-C-A 19684774-C-A **
21966487-C-A 19804601-C-A **
22055265-C-A 19893379-C-A **
22055292-T-C 19893406-T-C **
22056284-T-A 19894398-T-A **
22056308-C-A 19894422-C-A **
22128730-C-A 19966844-C-A **
22203664-C-A 20041778-C-A **
22287120-C-G 20125234-C-G DYZ19 **
22551360-A-G 20389474-A-G **
22808755-G-C 20646869-G-C **
22827487-T-A 20665601-T-A **
22827496-A-C 20665610-A-C **
22836580-C-A 20674694-C-A **
22843810-C-A 20681924-C-A **
23061151-C-A 20899265-C-A **
23098062-C-T 20936176-C-T **
23098078-G-T 20936192-G-T **
23098083-T-A 20936197-T-A **
23098085-A-G 20936199-A-G **
23098086-A-G 20936200-A-G **
23098090-G-A 20936204-G-A **
23098093-A-G 20936207-A-G **
23100682-T-G 20938796-T-G **
23126507-G-C 20964621-G-C **
23176838-A-G 21014952-A-G FT399243 **
23206860-T-G 21044974-T-G **
23277397-A-T 21115511-A-T **
23342002-T-G 21180116-T-G **
23952352-C-A 21806205-C-A **
23991866-G-T 21845719-G-T **
24446744-G-T 22300597-G-T **
24536776-A-AG 22390629-A-AG P3_t2 **
26138361-C-CAAG 23992214-C-CAAG P1_Y1 10×A**
26366571-G-A 24220424-G-A P1_Y1 **
27692870-G-A 25546723-G-A P1_Y2 **
27964684-T-A 25818537-T-A P1_Y2 **
28462008-C-A 26315861-C-A **
28496304-C-G 26350157-C-G **
28500789-G-A 26354642-G-A **
28536213-C-A 26390066-C-A **
28546766-T-A 26400619-T-A **
28589346-C-A 26443199-C-A **
28623290-G-C 26477143-G-C **
28649197-A-C 26503050-A-C **
28649225-A-T 26503078-A-T **
28692597-G-T 26546450-G-T **
28700810-T-C 26554663-T-C **
28703474-G-T 26557327-G-T **
28742116-A-G 26595969-A-G **
56823088-A-G **
56832873-C-G **
56833096-C-T **
56836755-A-C **
56836786-CT-C **
56842300-G-A **
56861868-G-T **
59026192-C-A 56880045-C-A **
22883-T-A **
33253-T-G **
6226038-T-A 6357997-T-A IR3_Dst ***
6226041-TA-T 6358000-TA-T IR3_Dst ***
7489041-AG-A 7621000-AG-A IR1_L ***
9355861-TA-T 9518252-TA-T ***
10037322-G-A 10199713-G-A ***
13450520-ACT-A 11294844-ACT-A ***
13450524-CACT-C 11294848-CACT-C ***
19781234-G-GTTA 17669354-G-GTTA P5_Prx ***
19781236-T-A 17669356-T-A P5_Prx ***
19781240-AC-A 17669360-AC-A P5_Prx ***
19973805-T-C 17861925-T-C P5_Prx ***
20016959-C-A 17905079-C-A P5_Prx ***
22283035-C-A 20121149-C-A DYZ19 ***
22285589-C-A 20123703-C-A DYZ19 ***
22290183-G-T 20128297-G-T DYZ19 ***
22365658-G-A 20203772-G-A DYZ19 ***
22368783-G-A 20206897-G-A DYZ19 ***
22508408-G-A 20346522-G-A DYZ19 ******
24155945-C-T 22009798-C-T P3_b1 ***
24240375-TC-T 22094228-TC-T P3_b1 ***
25277896-C-A 23131749-C-A P2_r1 ***
25675303-C-T 23529156-C-T P1_b3 ***
26238109-T-C 24091962-T-C P1_Y1 ***
26238118-A-G 24091971-A-G P1_Y1 ***
26238146-C-T 24091999-C-T P1_Y1 ***
26945276-G-T 24799129-G-T P1_r3 ***
25225458-G-GT 23079311-G-GT P2_r1 9×T***
8773858-CAAAAA-C 8905817-CAAAAA-C 16×A***
21175743-C-T 19013857-C-T ***
13484083-A-C 11328407-A-C ***
10807328-C-T ***
10980664-G-T ***
10980674-A-G ***
10808619-T-A ***
13457778-C-G 11302102-C-G ***
13457791-C-T 11302115-C-T ***
11659360-G-A ***
10666998-C-CTATT ***
10686608-TTCCAC-T ***
22855284-G-T 20693398-G-T ***
13480391-A-G 11324715-A-G ***
13480407-C-A 11324731-C-A ***
13856230-C-A 11735524-C-A ***
8119489-GTT-G 8251448-GTT-G 14×T***
9859192-CAAA-C,CAA 10021583-CAAA-C,CAA 17×A***
21267796-C-A 19105910-C-A ***
13478141-C-A 11322465-C-A ***
13457720-C-T 11302044-C-T ***
10627736-C-A ***
18869041-C-A 16757161-C-A ***
19302740-G-T 17190860-G-T ***
10764542-GCCATTTTCACTCCATT-G,GCCATTTTACTCCATT ***
5358801-C-A 5490760-C-A ***
6648717-A-G 6780676-A-G ***
8654183-C-A 8786142-C-A ***
9215400-G-A 9377791-G-A ***
9462657-TC-T 9625048-TC-T ***
10647789-C-A BY46476 FGC80225 ***
10666999-C-CGGGTTA ***
10693282-C-A ***
10748011-C-CACTCACGTTG ***
10748017-A-ATTTCT ***
10748028-T-TTTGGATTGAA ***
10807323-CTT-C,TTT ***
10937355-T-C ***
10937359-T-C ***
11017805-C-A ***
11653037-C-A ***
15983585-C-A 13871705-C-A ***
17929011-C-A 15817131-C-A ***
18850378-G-A 16738498-G-A ***
19479688-AGTGTGTGTGT-A,AGTGTGTGT 17367808-AGTGTGTGTGT-A,AGTGTGTGT 20×GT***
21211581-G-A 19049695-G-A ***
21353426-C-A 19191540-C-A ***
21747658-AT-A 19585772-AT-A ***
23522513-G-A 21360627-G-A ***
23952904-C-A 21806757-C-A ***
24359587-CAAA-C,CAA 22213440-CAAA-C,CAA 13×A***
24407129-C-T 22260982-C-T ***
26206120-G-T 24059973-G-T P1_Y1 ***
56830690-T-A,C ***
56833452-C-CCATTA ***
56835680-A-AAAGAT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.