Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > Z46512 > FGC78762 > ZZ19 > Z34609 > Z2571 > FGC11380 > FGC11388 > FGC11414 > FGC11407

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
GYBGZ
6896704-C-G 7028663-C-G FGC11402 YY+
8491779-C-T 8623738-C-T FGC11403 YY+
15635682-A-C 13523802-A-C FGC11405 YY+
16210601-C-G 14098721-C-G FGC11406 Y+
17605521-T-C 15493641-T-C FGC11408 YY+
17930321-C-T 15818441-C-T FGC11409 Y+
18060231-C-T 15948351-C-T FGC11410 YY+
21709352-G-C 19547466-G-C FGC11412 YY+
22440900-T-G 20279014-T-G FGC11415 DYZ19 *
23091536-G-A 20929650-G-A FGC11417 YY*
22438869-A-C 20276983-A-C DYZ19 **
13445362-CAAAAAAA-C 11289686-CAAAAAAA-C 15×A**
28253491-C-CAAAAA 26107344-C-CAAAAA P1_b4 32×A**
5886046-A-T 6018005-A-T FT72825 4×ATTT**
27461323-A-G 25315176-A-G P1_Y2 **
2984843-T-A 3116802-T-A **
2984844-T-A 3116803-T-A **
13221465-A-C 11065789-A-C **
13221521-C-T 11065845-C-T **
13372165-A-C 11216489-A-C **
13372170-C-G 11216494-C-G **
13805487-G-A 11684781-G-A FGC44465 **
22438020-A-T 20276134-A-T DYZ19 **
28749603-A-C 26603456-A-C **
3640987-TTTTCCTTTCCTTTCC-T 3772946-TTTTCCTTTCCTTTCC-T 11×TTTCC**
14625798-TG-T 12514066-GG-T **
23241947-C-CTTTTTT 21080061-C-CTTTTTT 27×T**
58858993-ATTCCATTGGATTACT-A 56731855-GAATGGAAAGTAATCC-G ***
22440308-T-G 20278422-T-G FGC8621Z17584 DYZ19 ***
24278286-C-A 22132139-C-A P3_b1 8×AG***
13701119-G-T 11545443-G-T ***
22300959-T-G 20139073-T-G DYZ19 ***
22337579-C-G 20175693-C-G DYZ19 ***
22361234-C-A 20199348-C-A DYZ19 ***
22491030-T-A 20329144-T-A DYZ19 ***
22496172-T-A 20334286-T-A DYZ19 ***
25268596-G-A 23122449-G-A P2_r1 ***
22337234-GG-AA 20175348-GG-AA DYZ19 ***
58880722-TACATTTGATGCCATC-T 56710133-GGATGGCATCAAATGT-G ***
22309410-T-C 20147524-T-C DYZ19 ***
22309373-A-C 20147487-A-C DYZ19 ***
13129615-C-T 10619101-C-T ***
13129616-T-G 10619102-T-G ***
13129622-C-G 10619108-C-G ***
13129623-A-G 10619109-A-G ***
13728301-T-A 11572625-T-A ***
19656572-C-T 17544692-C-T P5_Prx ***
19656617-C-A 17544737-C-A P5_Prx ***
21154779-C-G 18992893-C-G ***
22268290-C-A 20106404-C-A DYZ19 ***
22289511-T-C 20127625-T-C DYZ19 ***
22309445-T-A 20147559-T-A DYZ19 ***
22309476-G-A 20147590-G-A DYZ19 ***
22337241-G-T 20175355-G-T DYZ19 ***
22495777-A-G 20333891-A-G DYZ19 ***
58870737-A-T 56720134-T-A ***
19656534-TG-CA 17544654-TG-CA P5_Prx ***
19656560-CTTCTTA-GTCATTG 17544680-CTTCTTA-GTCATTG P5_Prx ***
22300957-GGT-ACG 20139071-GGT-ACG DYZ19 ***
13110082-G-A 10599568-G-A ***
13109961-T-G 10599447-T-G ***
13728292-G-A 11572616-G-A ***
18333709-G-T 16221829-G-T P6_Prx ***
18333746-A-T 16221866-A-T P6_Prx ***
18333778-A-T 16221898-A-T P6_Prx ***
19656534-T-C 17544654-T-C P5_Prx ***
19656535-G-A 17544655-G-A P5_Prx ***
19656560-C-G 17544680-C-G P5_Prx ***
19656562-T-C 17544682-T-C P5_Prx ***
19656563-C-A 17544683-C-A P5_Prx ***
19656566-A-G 17544686-A-G P5_Prx ***
19656658-A-C 17544778-A-C P5_Prx ***
19656670-A-C 17544790-A-C P5_Prx ***
19656671-A-T 17544791-A-T P5_Prx ***
19656678-C-T 17544798-C-T P5_Prx ***
19656733-A-T 17544853-A-T P5_Prx ***
20531449-A-G 18369563-A-G P5_Dst ***
20531502-A-T 18369616-A-T P5_Dst ***
20531503-T-C 18369617-T-C P5_Dst ***
20531511-G-A 18369625-G-A P5_Dst ***
22248333-A-G 20086447-A-G DYZ19 ***
58856239-T-C 56734632-A-G ***
58868293-G-A 56722578-C-T ***
58877107-T-C 56713764-A-G ***
22248332-TAC-AGT 20086446-TAC-AGT DYZ19 ***
22248350-A-AC 20086464-A-AC DYZ19 ***
22248354-AT-CA 20086468-AT-CA DYZ19 ***
22248406-TC-T 20086520-TC-T DYZ19 ***
22248409-G-GA 20086523-G-GA DYZ19 ***
58894963-TACATTTGATGCCATC-T 56695892-GGATGGCATCAAATGT-G ***
58910658-GCATTCCATTC-G 56680183-AAATGGAATGG-A 5×CATTC***
13728302-C-A 11572626-C-A ***
22292107-G-A 20130221-G-A BY19407BY188752 DYZ19 ***
22496058-T-A 20334172-T-A DYZ19 ***
58836772-C-G 56754099-G-C ***
58866458-C-A 56724413-G-T ***
58870539-A-T 56720332-T-A ***
58895199-C-A 56695672-G-T ***
58913236-G-T 56677635-C-A ***
22361069-CA-C 20199183-CA-C DYZ19 ***
13483953-T-G 11328277-T-G ***
13120534-G-A 10610020-G-A ***
13120533-T-A 10610019-T-A ***
20541524-A-G 18379638-A-G P5_Dst ***
20541527-T-A 18379641-T-A P5_Dst ***
22367160-G-T 20205274-G-T DYZ19 ***
58844807-A-T 56746064-T-A ***
58848788-G-T 56742083-C-A ***
58848796-T-A 56742075-A-T ***
58848817-T-G 56742054-A-C ***
58848818-T-A 56742053-A-T ***
19469890-G-C 17358010-G-C ***
13120420-A-T 10609906-A-T ***
13120428-C-T 10609914-C-T ***
24381403-T-AA 22235256-T-AA ***
22256959-T-C 20095073-T-C DYZ19 ***
10090493-A-G 10252884-A-G ***
22435814-C-G 20273928-C-G DYZ19 ***
22503533-A-G 20341647-A-G DYZ19 ***
58877133-G-T 56713738-C-A ***
58917657-N-A 56673214-N-T ***
13482982-CCTATCA-TACATCT 11327306-CCTATCA-TACATCT ***
13701958-CAAAAGGAATT-GAAATATAATA 11546282-CAAAAGGAATT-GAAATATAATA ***
22419676-N-T 20257790-N-T DYZ19 ***
22252915-T-G 20091029-T-G DYZ19 ***
58848535-G-C 56742336-C-G ***
58865808-A-C 56725063-T-G ***
22248514-GTA-TTC 20086628-GTA-TTC DYZ19 ***
22248527-TC-T 20086641-TC-T DYZ19 ***
22248532-CTG-TTGA 20086646-CTG-TTGA DYZ19 ***
22248543-TTGG-GTGT 20086657-TTGG-GTGT DYZ19 ***
22504612-AGTT-TGTC 20342726-AGTT-TGTC DYZ19 ***
22496169-T-C 20334283-T-C DYZ19 ***
13109899-G-T 10599385-G-T ***
13109923-C-T 10599409-C-T ***
58914422-C-CCATTG 56676444-G-GAATGC ***
22491371-G-T 20329485-G-T DYZ19 ***
58836048-C-T 56754823-G-A ***
22365977-GGTGG-TGTTA 20204091-GGTGG-TGTTA DYZ19 ***
22344649-A-C 20182763-A-C DYZ19 ***
22300958-G-C 20139072-G-C DYZ19 ***
22341728-T-G 20179842-T-G DYZ19 ***
9956269-CATC-AATT 10118660-CATC-AATT ***
13460172-G-T 11304496-G-T ***
19610119-C-T 17498239-C-T P5_Prx ***
28356602-A-T 26210455-A-T P1_gr2 ***
58870538-C-G 56720333-G-C ***
9301402-TA-AG 9463793-TA-AG ***
17946915-GTTTG-TTTTT 15835035-GTTTG-TTTTT ***
26391353-AT-TAA 24245206-AT-TAA P1_Y1 ***
22439187-C-T 20277301-C-T BY19692 DYZ19 ***
13120517-A-T 10610003-A-T ***
22344209-A-T 20182323-A-T DYZ19 ***
7211965-ACCCACCCA-CCCCCCCCC 7343924-ACCCACCCA-CCCCCCCCC ***
59007432-C-CTTTATT 56861285-C-CTTTATT 18×T***
22256945-A-G 20095059-A-G DYZ19 ***
22367933-G-A 20206047-G-A DYZ19 ***
22504467-T-G 20342581-T-G DYZ19 ***
13110115-T-A 10599601-T-A ***
13109955-A-C 10599441-A-C ***
25805091-C-A 23658944-C-A P1_b3 16×A***
22495929-A-T 20334043-A-T DYZ19 ***
13203955-CATCATT-GATGATA 11048279-CATCATT-GATGATA ***
58868742-C-G 56722129-G-C ***
10090513-C-T 10252904-C-T ***
13460165-GTG-TTC 11304489-GTG-TTC ***
22502690-A-T 20340804-A-T DYZ19 ***
22502698-G-T 20340812-G-T DYZ19 ***
22250493-G-T 20088607-G-T DYZ19 ***
13109944-T-A 10599430-T-A ***
22250480-A-G 20088594-A-G DYZ19 ***
13467390-ACTC-TCTG 11311714-ACTC-TCTG ***
13472933-A-T 11317257-A-T ***
13472906-A-C 11317230-A-C F18178 ***
22504362-G-T 20342476-G-T DYZ19 ***
59007959-C-CAAAAAAAA 56861812-C-CAAAAAAAA 26×A***
13728585-G-A 11572909-G-A ***
22245473-G-A 20083587-G-A DYZ19 ***
22365935-C-T 20204049-C-T DYZ19 ***
24415746-A-T 22269599-A-T ***
22164374-TAC-AAA 20002488-TAC-AAA ***
22440717-C-A 20278831-C-A BY21274 DYZ19 ***
22440615-A-C 20278729-A-C BY21270 DYZ19 ***
13472916-T-C 11317240-T-C ***
23713770-G-A 21551884-G-A ***
22292722-G-T 20130836-G-T DYZ19 ***
13110087-A-T 10599573-A-T ***
22440212-A-C 20278326-A-C BY10345 DYZ19 ***
58895414-T-C 56695457-A-G ***
18291141-C-G 16179261-C-G P6_Prx ***
22344309-G-C 20182423-G-C DYZ19 ***
26190539-C-T 24044392-C-T P1_Y1 ***
58880563-G-C 56710308-C-G ***
25626758-G-A 23480611-G-A P1_b3 ***
22292727-G-A 20130841-G-A DYZ19 ***
3070633-A-G 3202592-A-G ***
3902541-A-T 4034500-A-T ***
3902543-A-T 4034502-A-T ***
4820845-G-C 4952804-G-C ***
5434069-C-T 5566028-C-T ***
6577523-A-T 6709482-A-T ***
6725397-T-C 6857356-T-C ***
7873981-T-A 8005940-T-A ***
7939421-C-T 8071380-C-T FT137517 ***
8293606-C-A 8425565-C-A ***
9353653-T-A 9516044-T-A ***
9368488-T-C 9530879-T-C ***
9429259-T-C 9591650-T-C ***
9590415-G-T 9752806-G-T IR3_Prx ***
9590416-C-T 9752807-C-T IR3_Prx ***
9590422-G-T 9752813-G-T IR3_Prx ***
9704387-T-A 9866778-T-A IR3_Prx ***
10084421-A-T 10246812-A-T ***
10084453-G-T 10246844-G-T ***
10084462-A-G 10246853-A-G ***
10084466-G-A 10246857-G-A ***
10084476-T-A 10246867-T-A ***
10090440-A-G 10252831-A-G ***
10090442-T-A 10252833-T-A ***
10090444-G-T 10252835-G-T ***
10090445-G-T 10252836-G-T ***
10090458-A-T 10252849-A-T ***
10090469-G-A 10252860-G-A ***
10090672-T-A 10253063-T-A ***
10090676-T-A 10253067-T-A ***
10091218-C-T 10253609-C-T ***
13109888-A-G 10599374-A-G ***
13109914-A-G 10599400-A-G ***
13109921-T-C 10599407-T-C ***
13109945-A-T 10599431-A-T ***
13109949-T-A 10599435-T-A ***
13109950-C-A 10599436-C-A ***
13109957-G-A 10599443-G-A ***
13110038-C-T 10599524-C-T ***
13110054-C-T 10599540-C-T ***
13110292-C-G 10599778-C-G ***
13110299-G-A 10599785-G-A ***
13110331-A-C 10599817-A-C ***
13110333-T-C 10599819-T-C ***
13110334-G-A 10599820-G-A ***
13110365-T-G 10599851-T-G ***
13120426-A-C 10609912-A-C ***
13223483-G-A 11067807-G-A ***
13223488-G-A 11067812-G-A ***
13223508-G-A 11067832-G-A ***
13328911-A-T 11173235-A-T ***
13470366-G-T 11314690-G-T ***
13470368-C-A 11314692-C-A ***
13470380-G-A 11314704-G-A ***
13477202-C-T 11321526-C-T ***
13609043-G-A 11453367-G-A ***
13698832-G-T 11543156-G-T ***
13699185-T-G 11543509-T-G ***
13700303-A-G 11544627-A-G ***
13700312-A-G 11544636-A-G ***
13700315-C-A 11544639-C-A ***
13700728-A-T 11545052-A-T ***
13701028-T-G 11545352-T-G ***
13701063-G-T 11545387-G-T ***
13701109-G-T 11545433-G-T ***
13701111-A-T 11545435-A-T ***
13701113-G-C 11545437-G-C ***
13715468-A-G 11559792-A-G ***
13715469-C-G 11559793-C-G BY26305 ***
13720038-C-G 11564362-C-G ***
13720055-G-A 11564379-G-A ***
13720057-T-G 11564381-T-G ***
13720058-G-A 11564382-G-A ***
13720065-G-A 11564389-G-A ***
13728287-T-G 11572611-T-G ***
13728290-G-A 11572614-G-A ***
13728308-T-A 11572632-T-A ***
13734057-G-C 11578381-G-C ***
13923572-T-A 11802866-T-A ***
14058151-G-C 11937445-G-C ***
14259592-A-T 12138886-A-T ***
14564829-T-A 12453029-T-A BY16662 ***
14625801-T-C 12514069-T-C ***
14703805-T-A 12591871-T-A ***
14703806-T-G 12591872-T-G ***
14703811-T-C 12591877-T-C ***
14703826-T-C 12591892-T-C ***
14703849-T-A 12591915-T-A ***
14911010-C-T 12799077-C-T ***
14990381-G-A 12878466-G-A ***
15213357-C-G 13101443-C-G ***
15213438-T-A 13101524-T-A ***
15320654-A-G 13208760-A-G ***
15639879-T-C 13527999-T-C ***
15888047-T-C 13776167-T-C ***
16148721-G-T 14036841-G-T P8_Dst ***
16148741-G-A 14036861-G-A P8_Dst ***
16148743-T-A 14036863-T-A P8_Dst ***
16228081-A-T 14116201-A-T ***
16533570-G-A 14421690-G-A ***
17545799-G-A 15433919-G-A ***
18291131-A-G 16179251-A-G P6_Prx ***
18333766-T-A 16221886-T-A P6_Prx ***
18535420-T-C 16423540-T-C P6_Dst ***
18535421-G-A 16423541-G-A P6_Dst ***
18970304-G-A 16858424-G-A ***
19029214-C-A 16917334-C-A ***
19176484-T-C 17064604-T-C ***
19176538-C-T 17064658-C-T ***
19716019-G-A 17604139-G-A P5_Prx ***
19973991-T-A 17862111-T-A P5_Prx ***
19973992-T-A 17862112-T-A P5_Prx ***
19973999-C-A 17862119-C-A P5_Prx ***
20300868-G-C 18138982-G-C P5_Dst ***
20300872-A-T 18138986-A-T P5_Dst ***
20300875-T-A 18138989-T-A P5_Dst ***
20300888-G-A 18139002-G-A P5_Dst ***
20300908-C-T 18139022-C-T P5_Dst ***
20333863-G-A 18171977-G-A P5_Dst ***
20389769-C-A 18227883-C-A P5_Dst ***
20389774-C-G 18227888-C-G P5_Dst ***
20389781-A-T 18227895-A-T P5_Dst ***
20389800-C-T 18227914-C-T P5_Dst ***
20389808-T-G 18227922-T-G P5_Dst ***
20389813-G-T 18227927-G-T P5_Dst ***
20389817-C-T 18227931-C-T P5_Dst ***
20389818-A-G 18227932-A-G P5_Dst ***
20389832-G-T 18227946-G-T P5_Dst ***
20389835-A-C 18227949-A-C P5_Dst ***
20441956-A-G 18280070-A-G P5_Dst ***
20441961-T-A 18280075-T-A P5_Dst ***
20441986-A-G 18280100-A-G FT26055 P5_Dst ***
20442012-C-G 18280126-C-G P5_Dst ***
20541672-T-A 18379786-T-A P5_Dst ***
20541676-T-C 18379790-T-C P5_Dst ***
20541680-T-C 18379794-T-C P5_Dst ***
20541686-T-G 18379800-T-G P5_Dst ***
20602218-T-G 18440332-T-G P5_Dst ***
20602226-G-A 18440340-G-A P5_Dst ***
20602227-T-A 18440341-T-A P5_Dst ***
20602243-G-T 18440357-G-T P5_Dst ***
20602250-C-T 18440364-C-T P5_Dst ***
20666109-G-C 18504223-G-C P4_Prx ***
20666112-A-T 18504226-A-T P4_Prx ***
20666115-A-T 18504229-A-T P4_Prx ***
20666116-G-C 18504230-G-C P4_Prx ***
20666120-A-T 18504234-A-T P4_Prx ***
20666124-A-C 18504238-A-C P4_Prx ***
20666128-G-C 18504242-G-C P4_Prx ***
20666132-T-A 18504246-T-A P4_Prx ***
20666135-A-T 18504249-A-T P4_Prx ***
20666136-A-C 18504250-A-C P4_Prx ***
20685713-C-T 18523827-C-T P4_Prx ***
20685719-G-A 18523833-G-A P4_Prx ***
21208962-G-A 19047076-G-A ***
21537619-G-T 19375733-G-T ***
22225954-G-A 20064068-G-A BY213125 DYZ19 ***
22225959-G-T 20064073-G-T DYZ19 ***
22232288-C-A 20070402-C-A DYZ19 ***
22235063-C-G 20073177-C-G DYZ19 ***
22235075-G-T 20073189-G-T DYZ19 ***
22235079-C-A 20073193-C-A DYZ19 ***
22235085-C-A 20073199-C-A DYZ19 ***
22250259-C-A 20088373-C-A DYZ19 ***
22250504-T-A 20088618-T-A DYZ19 ***
22250531-G-A 20088645-G-A DYZ19 ***
22273552-T-A 20111666-T-A DYZ19 ***
22289747-C-A 20127861-C-A DYZ19 ***
22292698-G-T 20130812-G-T DYZ19 ***
22292760-A-T 20130874-A-T BY216346 DYZ19 ***
22292772-G-T 20130886-G-T DYZ19 ***
22292779-C-T 20130893-C-T BY216348 DYZ19 ***
22308616-G-T 20146730-G-T DYZ19 ***
22309346-G-A 20147460-G-A DYZ19 ***
22335198-A-C 20173312-A-C DYZ19 ***
22335201-G-T 20173315-G-T DYZ19 ***
22338190-A-T 20176304-A-T DYZ19 ***
22344237-A-T 20182351-A-T DYZ19 ***
22344289-G-T 20182403-G-T DYZ19 ***
22359796-A-G 20197910-A-G DYZ19 ***
22438754-T-A 20276868-T-A DYZ19 ***
22438780-T-G 20276894-T-G BY218580 DYZ19 ***
22438791-C-T 20276905-C-T DYZ19 ***
22438873-A-G 20276987-A-G DYZ19 ***
22438913-T-A 20277027-T-A DYZ19 ***
22438954-A-G 20277068-A-G BY218616 DYZ19 ***
22438989-C-T 20277103-C-T DYZ19 ***
22438997-T-A 20277111-T-A DYZ19 ***
22438999-C-T 20277113-C-T DYZ19 ***
22439020-T-A 20277134-T-A DYZ19 ***
22439179-G-T 20277293-G-T A6011 BY6801 DYZ19 ***
22439588-G-T 20277702-G-T DYZ19 ***
22439601-A-G 20277715-A-G DYZ19 ***
22439801-A-G 20277915-A-G DYZ19 ***
22439865-T-A 20277979-T-A DYZ19 ***
22440258-G-A 20278372-G-A FGC27663 DYZ19 ***
22440497-T-G 20278611-T-G A4268 DYZ19 ***
22440621-G-T 20278735-G-T DYZ19 ***
22440638-T-G 20278752-T-G DYZ19 ***
22440676-G-A 20278790-G-A BY218876 FGC61815 DYZ19 ***
22440718-C-A 20278832-C-A BY218885 DYZ19 ***
22440719-C-T 20278833-C-T BY15810 DYZ19 ***
22440752-G-T 20278866-G-T FT456539 DYZ19 ***
22440787-T-G 20278901-T-G BY218900 DYZ19 ***
22491031-T-G 20329145-T-G DYZ19 ***
22491392-C-G 20329506-C-G DYZ19 ***
22491437-T-C 20329551-T-C DYZ19 ***
22495933-T-A 20334047-T-A DYZ19 ***
22498433-G-A 20336547-G-A DYZ19 ***
22499854-G-A 20337968-G-A DYZ19 ***
22504365-T-C 20342479-T-C DYZ19 ***
22504369-G-T 20342483-G-T DYZ19 ***
22635578-T-A 20473692-T-A ***
22635579-T-A 20473693-T-A ***
23713761-T-G 21551875-T-G ***
24134494-C-A 21988347-C-A P3_b1 ***
24254143-G-A 22107996-G-A P3_b1 10×AC***
24254155-C-G 22108008-C-G P3_b1 ***
24254161-C-T 22108014-C-T P3_b1 ***
24254165-A-G 22108018-A-G P3_b1 ***
24374452-T-A 22228305-T-A ***
24415748-A-T 22269601-A-T ***
24415756-A-T 22269609-A-T ***
24415762-A-T 22269615-A-T ***
24491126-A-G 22344979-A-G ***
25990618-C-G 23844471-C-G P1_Y1 ***
25990620-T-G 23844473-T-G P1_Y1 ***
25990632-G-T 23844485-G-T P1_Y1 ***
26252690-A-T 24106543-A-T P1_Y1 ***
26252693-C-T 24106546-C-T P1_Y1 ***
26325005-C-T 24178858-C-T P1_Y1 ***
26391325-T-G 24245178-T-G P1_Y1 ***
26391354-T-A 24245207-T-A P1_Y1 ***
26501077-G-A 24354930-G-A P1_Y1 ***
27035479-C-T 24889332-C-T P1_r4 ***
27056070-T-A 24909923-T-A P1_r4 ***
27130157-T-A 24984010-T-A P1_g3 ***
27130161-A-G 24984014-A-G P1_g3 ***
27130165-A-T 24984018-A-T P1_g3 ***
27162020-T-A 25015873-T-A P1_g3 18×A***
27321005-G-T 25174858-G-T P1_g3 ***
27321015-C-T 25174868-C-T P1_g3 ***
27321017-C-T 25174870-C-T P1_g3 ***
27339358-C-T 25193211-C-T P1_g3 ***
27415878-T-A 25269731-T-A P1_g3 ***
27415889-A-T 25269742-A-T P1_g3 ***
27415891-G-A 25269744-G-A P1_g3 ***
27415893-T-A 25269746-T-A P1_g3 ***
27415895-G-C 25269748-G-C P1_g3 ***
27415905-T-A 25269758-T-A P1_g3 ***
27461760-T-A 25315613-T-A P1_Y2 ***
27499554-C-T 25353407-C-T P1_Y2 ***
27560207-C-A 25414060-C-A P1_Y2 ***
27560209-G-A 25414062-G-A P1_Y2 ***
27560212-C-G 25414065-C-G P1_Y2 ***
27614321-G-T 25468174-G-T P1_Y2 ***
27614332-T-A 25468185-T-A P1_Y2 ***
27614333-C-A 25468186-C-A P1_Y2 ***
27614336-T-A 25468189-T-A P1_Y2 ***
27614337-C-A 25468190-C-A P1_Y2 ***
27614362-C-A 25468215-C-A P1_Y2 ***
27814350-G-A 25668203-G-A P1_Y2 ***
27814352-T-A 25668205-T-A P1_Y2 ***
27814353-T-A 25668206-T-A P1_Y2 ***
27814354-T-A 25668207-T-A P1_Y2 ***
27814355-C-A 25668208-C-A P1_Y2 ***
27814363-A-T 25668216-A-T P1_Y2 ***
27832755-G-T 25686608-G-T P1_Y2 ***
27832757-G-C 25686610-G-C P1_Y2 ***
27832759-A-T 25686612-A-T P1_Y2 ***
27832760-A-T 25686613-A-T P1_Y2 ***
27832761-G-T 25686614-G-T P1_Y2 ***
27832762-A-C 25686615-A-C P1_Y2 ***
27832768-A-T 25686621-A-T P1_Y2 ***
27832770-A-C 25686623-A-C P1_Y2 ***
27998518-A-T 25852371-A-T P1_Y2 ***
27998523-A-T 25852376-A-T P1_Y2 ***
28236506-C-T 26090359-C-T P1_b4 ***
28491283-G-A 26345136-G-A ***
28491404-C-A 26345257-C-A ***
28491517-A-T 26345370-A-T ***
58830984-A-T 56759887-T-A ***
58833191-A-T 56757680-T-A ***
58833207-T-C 56757664-A-G ***
58838488-C-G 56752383-G-C ***
58841128-T-A 56749743-A-T ***
58843754-C-A 56747117-G-T ***
58843762-T-C 56747109-A-G ***
58843780-G-C 56747091-C-G ***
58846200-T-A 56744671-A-T ***
58848518-A-C 56742353-T-G ***
58848550-G-C 56742321-C-G ***
58849214-T-C 56741657-A-G ***
58852114-G-T 56738757-C-A ***
58854402-C-T 56736469-G-A ***
58854403-C-G 56736468-G-C ***
58856591-C-A 56734280-G-T ***
58859561-G-C 56731310-C-G ***
58859563-T-G 56731308-A-C ***
58865700-T-G 56725171-A-C ***
58865705-T-A 56725166-A-T ***
58865728-G-T 56725143-C-A ***
58865732-G-C 56725139-C-G ***
58868303-C-A 56722568-G-T ***
58870288-T-A 56720583-A-T ***
58870720-G-C 56720151-C-G ***
58875030-A-C 56715841-T-G ***
58877106-A-T 56713765-T-A ***
58883262-G-T 56707609-C-A ***
58884357-C-T 56706514-G-A ***
58903726-C-T 56687145-G-A ***
58910961-T-A 56679910-A-T ***
58912672-C-T 56678199-G-A ***
58914442-C-G 56676429-G-C ***
58995130-TG-CA 56848983-TG-CA ***
10013371-TG-CT 10175762-TG-CT ***
13475767-ACG-TCA 11320091-ACG-TCA ***
8725759-TCACACA-T 8857718-TCACACA-T 19×CA***
2984843-TT-AA 3116802-TT-AA ***
3550569-CAACTC-AAA 3682528-CAACTC-AAA ***
5354747-CACAT-TACAC 5486706-CACAT-TACAC ***
6089764-G-GTTTTTTT 6221723-G-GTTTTTTT 31×T***
7418073-C-CAA 7550032-C-CAA 22×A***
8452192-C-AA 8584151-C-AA 15×A***
10034819-TGGACTCCT-GGGACGCCG 10197210-TGGACTCCT-GGGACGCCG ***
13110331-ATTG-CTCA 10599817-ATTG-CTCA ***
13203922-CGGC-TGGT 11048246-CGGC-TGGT ***
13203963-TGG-CGGT 11048287-TGG-CGGT ***
13328868-CG-TT 11173192-CG-TT ***
13477362-TCCT-CCCG 11321686-TCCT-CCCG ***
13480021-TCTG-CCTA 11324345-TCTG-CCTA ***
13486802-A-AC 11331126-A-AC ***
13488843-TG-CC 11333167-TG-CC ***
13700736-AGTAGAATAAATACT-A 11545060-AGTAGAATAAATACT-A ***
13700757-T-TGGAAA 11545081-T-TGGAAA ***
13728570-GA-TG 11572894-GA-TG ***
15018939-G-GTTTTT 12907028-G-GTTTTT 15×T***
15558495-TAGATAGAC-T 13446615-TAGATAGAC-T ***
15842559-T-TTC 13730679-T-TTC ***
15940331-G-AAA 13828451-G-AAA ***
16205796-CTTTTTTTTTTT-C 14093916-CTTTTTTTTTTT-C 21×T***
17604931-G-GTTTTTTT 15493051-G-GTTTTTTT 24×T***
18612766-T-TATATACACACACACAC 16500886-T-TATATACACACACACAC ***
18735674-C-CTTTTT 16623794-C-CTTTTT 24×T***
19346433-C-TCTTT 17234553-C-TCTTT 15×CTTT***
19377435-GAAGG-AAAGA 17265555-GAAGG-AAAGA ***
19775302-C-CTTTTT 17663422-C-CTTTTT P5_Prx 32×T***
19937284-G-GCCC 17825404-G-GCCC P5_Prx 13×C***
20025478-T-TCCCCCCCCCC 17913598-T-TCCCCCCCCCC P5_Prx ***
20424785-AAATG-A 18262899-AAATG-A P5_Dst ***
20989156-TAT-CAC 18827270-TAT-CAC P4_Dst ***
21096458-C-CAAAAAAA 18934572-C-CAAAAAAA 16×A***
22232331-TA-CG 20070445-TA-CG DYZ19 ***
22308615-AG-GT 20146729-AG-GT DYZ19 ***
22352888-AC-GT 20191002-AC-GT DYZ19 ***
22438762-AG-A 20276876-AG-A DYZ19 ***
22438771-GT-AG 20276885-GT-AG DYZ19 ***
22439914-TTTAAC-GTTACA 20278028-TTTAAC-GTTACA DYZ19 ***
22440606-GCTCCAGTCA-TCTGCGGACC 20278720-GCTCCAGTCA-TCTGCGGACC DYZ19 ***
22440716-CCCC-TAAT 20278830-CCCC-TAAT DYZ19 ***
22440731-AA-GC 20278845-AA-GC DYZ19 ***
22440762-TTTAAAA-CTTAGAG 20278876-TTTAAAA-CTTAGAG DYZ19 ***
22481631-AG-TA 20319745-AG-TA DYZ19 ***
23199746-A-ACCCCCCC 21037860-A-ACCCCCCC 11×C***
24388085-T-TAG 22241938-T-TAG ***
27130157-TGCCAATGA-AGCCGATGT 24984010-TGCCAATGA-AGCCGATGT P1_g3 ***
27714328-CTTTT-C 25568181-CTTTT-C P1_Y2 15×T***
28461722-C-CTTTT 26315575-C-CTTTT 19×T***
28596723-AAGGT-GAGAC 26450576-AAGGT-GAGAC ***
28721499-C-CAAAA 26575352-C-CAAAA 18×A***
28798940-TAT-GAA 26652793-TAT-GAA ***
58840663-ATGAAT-A 56750201-GAATTC-G ***
58843791-TTTTGAA-ATTTGAT 56747074-TTCAAAA-ATCAAAT ***
58858959-CTCTATC-TTCCATT 56731906-GATAGAG-AATGGAA ***
58870534-TTTCCA-ATTCGT 56720332-TGGAAA-ACGAAT ***
58981977-TTC-T 56835830-TTC-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.