HIDE SNP NAMES

The Big Tree: R-BY4245

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > BY4245

BY4245 falls within the DYZ19 region of the Y chromosome and is not well tested by the BigY test. Other men may be positive for this SNP, without it showing up in their raw VCF data. One would have to check their BAM file to be sure. Furthermore, the results are not clean, but rather show a combination of both ancestral and derived reads.
BY4245
BY3504
BY3485
Y22925
BY14170 FGC63186 Y31606
Y22188
Y22929
Y22928
Y22191
Y22192
Y22924
BY4246 Y20253
Y22194
BY14171
15984654-CAT-C
BY14172
Y22190
BY3484
BY3478
Y22926
Y22927
BY14173
BY3501
7027754-CAAAAAAG-C
BY3505
BY3481
BY14174
BY14175
BY14176
BY14177
BY14178
BY14179
BY14180
BY14186
BY14181
BY14182
BY14183
L729 M2087 Z15 Z548
BY14184
21423041-GTTC-G
FGC20668
BY38752
BY38753
BY38754
8693251-G-A
BY38755
BY38756
BY38757
BY101846
BY105390
BY38758
BY38759
BY38760
BY38761
BY38762
BY38763
BY38764
BY136872
BY140604
BY61747
Y15601 Z36246
BY53944
BY100130
BY110359
BY126204
BY127298
BY40757
BY134502
BY139461
BY140400
BY55409
Rabai
N119885
Stampa
E4959
Williams
24268
Wright
22677
Berther
494139
Berther
527826
Lebanon
M11237
Miller
265523
McCairn
N103272
Sgriccia
N21805
Arias
N60267
Richards
656831

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.

Z18068
SNP names which are bold grey indicates that their exact position on the tree is uncertain. This SNP may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests.