Block Information

Upstream Blocks:

Children:

Displays:

Mutations in Block:

Names	Region	Unc	McDonald BED	combBED	Position
Z29697 BY907					hg19:Y:9517934-G-C hg38:Y:9680325-G-C
S1306 AM00494			Y	Y	hg19:Y:17650871-C-A hg38:Y:15538991-C-A
CTS7768 S1307 AM00495			Y	Y	hg19:Y:17651684-A-C hg38:Y:15539804-A-C
S1319 AM00497			Y		hg19:Y:23237563-C-A hg38:Y:21075677-C-A
DF17 AM00499 S455			Y	Y	hg19:Y:6631746-T-G hg38:Y:6763705-T-G
S11695 SK2120			Y	Y	hg19:Y:8596434-C-G hg38:Y:8728393-C-G
FT221441	IR3_Dst				hg19:Y:6196037-A-G hg38:Y:6327996-A-G
FT221442	IR3_Dst				hg19:Y:6196039-A-T hg38:Y:6327998-A-T
BY31055	DYZ17				hg19:Y:13705270-C-G hg38:Y:11549594-C-G
Z29695		Unc^†			hg19:Y:4168177-T-C hg38:Y:4300136-T-C
Y3469 AM00492			Y	Y	hg19:Y:14549106-C-T hg38:Y:12437307-C-T
CTS5083 AM00493			Y		hg19:Y:16005198-G-C hg38:Y:13893318-G-C
BY31056	DYZ17	Unc^†			hg19:Y:13707530-A-G hg38:Y:11551854-A-G
S1313 AM00496		Unc^†	Y		hg19:Y:21265178-G-A hg38:Y:19103292-G-A
A19290	IR3_Prx	Unc^†			hg19:Y:9577022-A-C hg38:Y:9739413-A-C
Z32165	DYZ17	Unc^†			hg19:Y:13693423-C-T hg38:Y:11537747-C-T
	P4_Prx	Unc^†			hg19:Y:20688106-C-T hg38:Y:18526220-C-T

*Mutations whose exact position can't be determined precisely from NGS tests, such as those in palindromes, are shown with a pink background.

^†For some mutations, their exact position on the tree is uncertain. The mutation may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs/INDELs found in FGC kits or 1kG kits in regions not covered by BigY tests.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin, The Russian Journal of Genetic Genealogy (Русская версия), Vol 6, No 2 (2014)/Vol 7, No 1 (2015).

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Data

The data below reveals the progression of changes in the haplotype. These are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are a work in progress, and any suggested modifications are appreciated. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

	DYS393	DYS390	DYS19	DYS391	DYS385	DYS426	DYS388	DYS439	DYS389i	DYS392	DYS389ii	DYS458	DYS459	DYS455	DYS454	DYS447	DYS437	DYS448	DYS449	DYS464	DYS460	Y-GATA-H4	YCAII	DYS456	DYS607	DYS576	DYS570	CDY	DYS442	DYS438	DYS531	DYS578	DYF395S1	DYS590	DYS537	DYS641	DYS472	DYF406S1	DYS511	DYS425	DYS413	DYS557	DYS594	DYS436	DYS490	DYS534	DYS450	DYS444	DYS481	DYS520	DYS446	DYS617	DYS568	DYS487	DYS572	DYS640	DYS492	DYS565	DYS710	DYS485	DYS632	DYS495	DYS540	DYS714	DYS716	DYS717	DYS505	DYS556	DYS549	DYS589	DYS522	DYS494	DYS533	DYS636	DYS575	DYS638	DYS462	DYS452	DYS445	Y-GATA-A10	DYS463	DYS441	Y-GGAAT-1B07	DYS525	DYS712	DYS593	DYS650	DYS532	DYS715	DYS504	DYS513	DYS561	DYS552	DYS726	DYS635	DYS587	DYS643	DYS497	DYS510	DYS434	DYS461	DYS435
P312/S116	13	24	14	11	11-14	12	12	12	13	13	29	17	9-10	11	11	25	15	19	29	15-15-17-17	11	11	19-23	16	15	18	17	36-38	12	12	11	9	15-16	8	10	10	8	10	10	12	23-23	16	10	12	12	15	8	12	22	20	13	12	11	13	11	11	12	12	33	15	9	16	12	26	26	19	12	11	13	12	10	9	12	12	10	11	11	30	12	13	24	13	10	10	20	15	19	13	24	17	12	15	24	12	23	18	10	14	17	9	12	11

Age Analysis - Not yet completed for this block

Measure	Age (YBP)
Mean	0.0
Median	0.0
Mode	0.0