Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > Z49 > Z142/S211 > Z150 > BY33533 > BY33564

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
B192133
22231872-T-C 20069986-T-C DYZ19 A*
20792074-T-C 18630188-T-C P4_Prx A*
22257950-T-G 20096064-T-G DYZ19 A*
28817046-G-C 26670899-G-C A*
7750744-T-C 7882703-T-C A195Z16253 A195 YY+
23785909-C-T 21624023-C-T BZ2857 Y+
19368347-T-G 17256467-T-G BY128532 YY+
16967186-C-A 14855306-C-A BY111490 YY+
16544310-C-T 14432430-C-T FGC29196 YY+
14536131-A-T 12424332-A-T BY96352 YY+
24469293-T-G 22323146-T-G BY150174 Y+
24461525-G-A 22315378-G-A BY150126 Y+
10039660-C-T 10202051-C-T BY54001 +
14666705-C-A 12554771-C-A BY54660 YY+
6959336-G-T 7091295-G-T BY62528 YY+
23756786-A-G 21594900-A-G BY147443 Y+
6858264-A-G 6990223-A-G BY61761 YY+
3079290-C-T 3211249-C-T BY57406 +
23138430-G-T 20976544-G-T BY143284 YY+
9065627-G-A 9228018-G-A BY42803 Y+
17498200-C-T 15386320-C-T PH3133 YY+
8623042-G-A 8755001-G-A BY74663 YY+
8342290-C-G 8474249-C-G BY71841 YY+
15852216-C-G 13740336-C-G BY104549 YY+
15545792-T-C 13433912-T-C M8045 YY+
17029529-G-C 14917649-G-C BY111839 YY+
21070826-C-T 18908940-C-T BY130240 YY+
17665595-G-T 15553715-G-T BY116491 YY+
19117678-A-T 17005798-A-T BY126425 YY+
18158781-G-A 16046901-G-A BY120476 Y+
17337392-G-A 15225512-G-A BY113946 YY+
17178987-G-A 15067107-G-A CTS6900 YY+
19141340-C-CAT 17029460-C-CAT *
22233853-T-G 20071967-T-G DYZ19 *
22318100-T-G 20156214-T-G DYZ19 *
22300220-C-A 20138334-C-A DYZ19 *
28810266-G-A 26664119-G-A *
22238168-C-G 20076282-C-G DYZ19 *
16053628-T-A 13941748-T-A **
16055999-G-A 13944119-G-A **
17475087-C-T 15363207-C-T **
16107416-T-A 13995536-T-A P8_Prx **
16107418-T-A 13995538-T-A P8_Prx **
16135294-T-A 14023414-T-A P8_Dst **
17475076-G-A 15363196-G-A **
16053582-G-T 13941702-G-T **
17038678-A-C 14926798-A-C **
16052106-T-G 13940226-T-G **
17475098-A-G 15363218-A-G **
17475103-C-T 15363223-C-T **
15899104-G-T 13787224-G-T **
17475109-ATTT-A 15363229-ATTT-A 8×T**
15792729-A-C 13680849-A-C **
17475135-G-A 15363255-G-A **
15775695-C-A 13663815-C-A **
15775692-G-C 13663812-G-C **
17475090-C-A 15363210-C-A **
16181006-G-T 14069126-G-T **
16164405-C-A 14052525-C-A P8_Dst **
16445653-A-T 14333773-A-T **
17038669-T-G 14926789-T-G **
17038653-G-C 14926773-G-C **
17142150-A-C 15030270-A-C **
17164698-T-C 15052818-T-C **
16926222-C-G 14814342-C-G **
16881605-C-A 14769725-C-A **
16636910-C-A 14525030-C-A **
16621597-C-A 14509717-C-A **
16575208-G-T 14463328-G-T **
17175343-C-A 15063463-C-A **
16540201-T-C 14428321-T-C **
15773433-G-T 13661553-G-T **
17475048-T-G 15363168-T-G **
16411005-C-A 14299125-C-A **
16320147-A-C 14208267-A-C **
17217309-CTCT-C 15105429-CTCT-C 5×TCT**
16316786-T-G 14204906-T-G **
17244395-A-T 15132515-A-T **
17244421-C-T 15132541-C-T **
17475036-G-A 15363156-G-A **
16297386-T-G 14185506-T-G **
16277814-A-G 14165934-A-G **
16272064-A-T 14160184-A-T **
17475043-C-G 15363163-C-G **
16424527-C-A 14312647-C-A **
15400444-G-T 13288564-G-T **
15763931-G-A 13652051-G-A **
13724742-C-A 11569066-C-A **
14053038-C-G 11932332-C-G **
13936361-A-G 11815655-A-G **
13902133-A-C 11781427-A-C **
13881605-G-T 11760899-G-T **
13860940-T-A 11740234-T-A **
13846759-G-T 11726053-G-T **
11677344-A-C **
11663748-A-T **
11663647-T-A **
11655287-G-T **
11650191-G-T **
13726394-G-T 11570718-G-T **
13698903-A-T 11543227-A-T **
14053077-A-T 11932371-A-T **
13698880-G-T 11543204-G-T **
13698858-G-C 11543182-G-C **
13641137-A-T 11485461-A-T **
13640510-C-A 11484834-C-A **
13577974-G-C 11422298-G-C **
13564593-T-A 11408917-T-A **
13490376-T-A 11334700-T-A **
13453209-A-T 11297533-A-T **
13385432-C-G 11229756-C-G **
13235512-C-A 11079836-C-A **
13234851-A-C 11079175-A-C **
13229672-A-C 11073996-A-C **
13226346-A-T 11070670-A-T **
14053075-G-T 11932369-G-T **
14067008-A-G 11946302-A-G **
15761685-C-A 13649805-C-A **
15049981-C-A 12938072-C-A **
15688434-A-C 13576554-A-C **
15684243-A-T 13572363-A-T **
15600047-C-A 13488167-C-A **
15446961-A-C 13335081-A-C **
15422995-A-C 13311115-A-C **
15395074-G-T 13283194-G-T **
15232161-T-A 13120247-T-A **
15218987-C-A 13107073-C-A **
15092635-T-C 12980724-T-C **
15092630-G-A 12980719-G-A **
15092621-G-A 12980710-G-A **
15092619-T-C 12980708-T-C **
15092593-TA-T 12980682-TA-T **
14992692-T-G 12880777-T-G **
14142281-C-A 12021575-C-A **
14932060-G-T 12820125-G-T **
14765058-C-A 12653127-C-A **
14755835-A-T 12643904-A-T **
14742922-G-T 12630990-G-T **
14581047-T-G 12469247-T-G **
14524839-G-T 12413040-G-T **
14474685-G-T 12353954-G-T **
14448224-G-T 12327497-G-T **
14431486-C-A 12310759-C-A **
14383357-G-T 12262653-G-T **
14315661-ATGAGCCACTGCAC-A 12194955-ATGAGCCACTGCAC-A **
14293718-A-C 12173012-A-C **
14241956-T-C 12121250-T-C **
17480034-G-T 15368154-G-T **
18370796-C-A 16258916-C-A P6_Prx **
17518897-C-A 15407017-C-A **
21753154-C-A **
26018323-A-T 23872176-A-T P1_Y1 **
25970732-C-CT 23824585-C-CT P1_Y1 **
25954331-T-TA 23808184-T-TA P1_Y1 **
25885726-G-A 23739579-G-A P1_Y1 **
25257686-A-T 23111539-A-T P2_r1 **
25257680-G-T 23111533-G-T P2_r1 **
25257667-A-T 23111520-A-T P2_r1 **
25246418-C-T 23100271-C-T P2_r1 **
24518154-A-C 22372007-A-C **
24402408-T-A 22256261-T-A **
24270848-G-T 22124701-G-T P3_b1 **
24270835-A-T 22124688-A-T P3_b1 **
23817996-A-T 21656110-A-T **
26031948-G-T 23885801-G-T P1_Y1 **
23722969-G-T 21561083-G-T **
23475699-T-G 21313813-T-G **
23447424-C-A 21285538-C-A **
23442735-A-C 21280849-A-C **
23333211-G-T 21171325-G-T **
23291216-T-A 21129330-T-A **
23252614-T-G 21090728-T-G **
23065037-A-C 20903151-A-C **
22659410-T-C 20497524-T-C **
22615295-T-A 20453409-T-A **
22591470-G-T 20429584-G-T **
22472261-G-A 20310375-G-A DYZ19 **
22210557-T-A 20048671-T-A **
26018399-G-T 23872252-G-T P1_Y1 **
26031959-C-A 23885812-C-A P1_Y1 **
22045511-T-A 19883625-T-A **
28734805-C-A 26588658-C-A **
56850743-C-G **
56847753-T-G **
56847737-T-A **
56847730-T-A **
56847261-T-C **
56842064-A-G **
28815066-T-A 26668919-T-A **
28814100-T-C 26667953-T-C **
28814092-C-G 26667945-C-G **
28805855-A-C 26659708-A-C **
28804015-A-G 26657868-A-G **
28795300-G-T 26649153-G-T **
28736118-C-A 26589971-C-A **
28730011-A-C 26583864-A-C **
26053806-T-A 23907659-T-A P1_Y1 **
28729306-C-A 26583159-C-A **
28715036-G-T 26568889-G-T **
28714243-A-C 26568096-A-C **
28659858-A-C 26513711-A-C **
28616911-A-G 26470764-A-G **
28561345-C-A 26415198-C-A **
28537664-C-A 26391517-C-A **
28479028-C-A 26332881-C-A **
27822216-G-T 25676069-G-T P1_Y2 **
27240142-G-T 25093995-G-T P1_g3 **
26355428-A-T 24209281-A-T P1_Y1 **
26053830-G-C 23907683-G-C P1_Y1 **
26053825-G-C 23907678-G-C P1_Y1 **
22171396-T-A 20009510-T-A **
21969315-C-T 19807429-C-T **
17567524-A-C 15455644-A-C **
19097335-C-G 16985455-C-G **
19663393-C-A 17551513-C-A P5_Prx **
19610301-G-T 17498421-G-T P5_Prx **
19605059-A-T 17493179-A-T P5_Prx **
19594462-A-G 17482582-A-G P5_Prx **
19558281-T-G 17446401-T-G **
19418205-T-A 17306325-T-A 9×A**
19415385-G-T 17303505-G-T **
19330232-A-G 17218352-A-G **
19312579-A-T 17200699-A-T **
19298712-C-A 17186832-C-A **
19121817-T-A 17009937-T-A **
19097398-A-C 16985518-A-C **
19097343-C-G 16985463-C-G **
18976653-G-A 16864773-G-A **
19718971-A-C 17607091-A-C P5_Prx **
18778982-T-C 16667102-T-C **
18630794-A-C 16518914-A-C **
18518238-T-A 16406358-T-A P6_Dst **
18480134-A-T 16368254-A-T P6_Dst **
18480133-A-T 16368253-A-T P6_Dst **
11018045-T-G **
18270281-AAAAG-A 16158401-AAAAG-A **
18159223-A-T 16047343-A-T **
17918700-C-T 15806820-C-T **
17918688-C-G 15806808-C-G **
17724766-AACAACT-A 15612886-AACAACT-A **
17631647-CC-G 15519767-CC-G **
17605091-A-C 15493211-A-C **
19718964-A-C 17607084-A-C P5_Prx **
19718985-A-C 17607105-A-C P5_Prx **
21698333-AG-T 19536447-AG-T **
20709068-A-C 18547182-A-C P4_Prx **
21582390-C-A 19420504-C-A **
21408491-A-T 19246605-A-T **
21325785-C-A 19163899-C-A **
21268911-T-A 19107025-T-A **
21201831-C-A 19039945-C-A **
21061695-C-A 18899809-C-A **
21023234-A-C 18861348-A-C P4_Dst **
21023174-G-T 18861288-G-T P4_Dst **
20802811-A-C 18640925-A-C P4_Gap **
20771714-G-GAC 18609828-G-GAC P4_Prx 25×A**
20771698-T-G 18609812-T-G P4_Prx **
20709138-T-C 18547252-T-C P4_Prx **
20709105-T-A 18547219-T-A P4_Prx **
20613562-T-C 18451676-T-C P4_Prx **
19718991-T-G 17607111-T-G P5_Prx **
20585215-C-G 18423329-C-G P5_Dst **
20585168-A-AAT 18423282-A-AAT P5_Dst **
20431124-G-T 18269238-G-T P5_Dst **
20431113-G-T 18269227-G-T P5_Dst **
20431082-G-T 18269196-G-T P5_Dst **
20424808-G-T 18262922-G-T P5_Dst **
20312684-G-T 18150798-G-T P5_Dst **
20280166-C-A 18118280-C-A P5_Dst **
20280151-CCTTC-G 18118265-CCTTC-G P5_Dst **
20229581-C-G 18067695-C-G P5_Dst **
20229568-AC-A 18067682-AC-A P5_Dst **
20051089-T-G 17939209-T-G P5_Prx **
19926943-T-A 17815063-T-A P5_Prx **
13218003-C-A 11062327-C-A **
10992323-T-A **
10997287-C-A **
11649407-C-G **
22995376-GTTTTT-G 20833490-GTTTTT-G 21×T**
16270714-T-A 14158834-T-A **
13745530-C-A 11589854-C-A **
18190626-G-T 16078746-G-T **
14041552-A-T 11920846-A-T **
15698757-GACACACAC-G 13586877-GACACACAC-G 24×AC**
7384698-C-A 7516657-C-A **
10860445-C-A **
15092592-C-T 12980681-C-T **
18480124-A-T 16368244-A-T P6_Dst **
4298272-G-T 4430231-G-T **
11649441-A-T **
10744530-A-T **
7097911-C-A 7229870-C-A **
15943608-G-T 13831728-G-T **
7102398-C-A 7234357-C-A **
23773840-A-C 21611954-A-C **
14549612-C-A 12437813-C-A **
6784505-T-A 6916464-T-A **
4113001-C-A 4244960-C-A **
18972904-C-A 16861024-C-A **
10772443-T-TACACTACAC **
10666337-G-T **
24432705-G-T 22286558-G-T **
17475046-C-G 15363166-C-G **
23465788-G-T 21303902-G-T **
14191933-T-G 12071227-T-G **
21544857-C-A 19382971-C-A **
5936036-C-A 6067995-C-A **
22078151-G-T 19916265-G-T **
3804732-CAAAAAAAAA-C 3936691-CAAAAAAAAA-C 29×A**
4460062-G-C 4592021-G-C **
4377521-A-C 4509480-A-C **
4357723-T-A 4489682-T-A **
4241504-AAGGAACACTT-A 4373463-AAGGAACACTT-A **
4241193-C-A 4373152-C-A **
4241181-G-C 4373140-G-C **
4223825-G-T 4355784-G-T **
4080940-T-A 4212899-T-A **
3964800-G-T 4096759-G-T **
3951535-C-T 4083494-C-T **
3849528-ATCTATGTGTC-A 3981487-ATCTATGTGTC-A **
3835008-G-T 3966967-G-T **
3815112-T-A 3947071-T-A **
3622373-C-A 3754332-C-A **
17254953-C-A 15143073-C-A **
3591775-A-T 3723734-A-T **
3591535-C-A 3723494-C-A **
3550593-A-C 3682552-A-C **
2986083-G-C 3118042-G-C **
2738758-TTTTTC-T 2870717-TTTTTC-T **
2699432-A-G 2831391-A-G **
14505398-C-A 12393603-C-A **
3179039-C-A 3310998-C-A **
19318321-C-A 17206441-C-A **
17444766-C-A 15332886-C-A **
14765038-C-A 12653107-C-A **
13641183-C-A 11485507-C-A **
11673601-C-A **
5336835-G-T 5468794-G-T **
10912969-G-T **
4578077-T-A 4710036-T-A **
7348607-C-A 7480566-C-A **
10761814-C-T **
14041509-C-A 11920803-C-A **
10996354-G-A **
6881299-C-A 7013258-C-A **
10679269-T-C **
21422226-C-A 19260340-C-A **
10744252-C-A **
21072310-C-A 18910424-C-A **
16107423-T-A 13995543-T-A P8_Prx **
4088539-C-A 4220498-C-A **
9140166-T-G 9302557-T-G **
11022099-TC-T **
19416659-C-A 17304779-C-A **
10889543-G-T **
10770704-G-C **
10772442-A-AC **
7783328-C-A 7915287-C-A **
22198841-C-A 20036955-C-A **
14960367-C-A 12848442-C-A **
19507021-C-A 17395141-C-A **
16989162-C-A 14877282-C-A **
17490160-C-A 15378280-C-A **
28742529-C-A 26596382-C-A **
23723659-A-T 21561773-A-T **
9398041-G-GAAA 9560432-G-GAAA 15×A**
8854366-A-T 8986325-A-T M4764 **
22591468-C-A 20429582-C-A **
28814079-T-G 26667932-T-G **
3536395-G-T 3668354-G-T **
10770719-G-C **
11649417-GATAAC-G **
7018051-TAG-T 7150010-TAG-T **
22429407-T-A 20267521-T-A DYZ19 **
11022876-C-G **
28514555-C-A 26368408-C-A **
16085522-C-A 13973642-C-A **
4534096-C-A 4666055-C-A **
14347981-C-A 12227276-C-A **
16783375-C-A 14671495-C-A **
13941113-C-A 11820407-C-A **
10943373-T-C **
10770726-T-C **
10911677-G-T **
8333661-T-G 8465620-T-G **
6642373-C-A 6774332-C-A Y82216 **
14605725-C-A 12493927-C-A **
21495397-C-A 19333511-C-A **
3179092-C-A 3311051-C-A **
18007577-G-T 15895697-G-T P7_Gap **
13239681-T-G 11084005-T-G **
13929137-C-A 11808431-C-A **
16981181-C-A 14869301-C-A **
4371153-C-A 4503112-C-A **
10692112-C-A **
21238704-T-G 19076818-T-G **
15740460-C-A 13628580-C-A **
13462338-C-A 11306662-C-A **
26248832-G-T 24102685-G-T P1_Y1 **
15092625-A-C 12980714-A-C **
15092614-T-G 12980703-T-G **
4576034-T-G 4707993-T-G **
4226095-A-C 4358054-A-C **
4616499-C-A 4748458-C-A **
9932154-G-C 10094545-G-C **
10679305-T-C **
10679284-T-C **
10677164-C-A **
10662923-T-TC **
10662903-C-T **
10662881-C-G **
10662870-A-C **
10654956-C-A **
9957992-C-A 10120383-C-A **
9944019-A-T 10106410-A-T **
9934814-T-G 10097205-T-G **
9934803-G-T 10097194-G-T **
9929758-T-G 10092149-T-G **
10690545-C-A **
9929735-A-C 10092126-A-C **
9929714-A-C 10092105-A-C **
9592396-G-T 9754787-G-T IR3_Prx **
9592347-T-A 9754738-T-A IR3_Prx **
9592346-C-A 9754737-C-A IR3_Prx **
9592339-C-A 9754730-C-A IR3_Prx **
9398071-T-C 9560462-T-C **
4676794-G-T 4808753-G-T **
8907710-T-C 9039669-T-C **
8822447-G-T 8954406-G-T **
8109908-C-T 8241867-C-T **
8075999-A-T 8207958-A-T **
7984482-G-A 8116441-G-A **
10683000-A-T **
10693931-T-G **
7347689-T-G 7479648-T-G **
10926650-T-G **
10992034-T-G **
10976557-A-C **
10976509-C-A **
10976505-A-T **
10973901-T-G **
10969487-C-A **
10964724-C-A **
10949672-C-A **
10943413-C-T **
10943398-T-A **
10943362-A-C **
10943336-C-T **
10936666-C-A **
10926644-A-G **
10693963-C-A **
10901424-G-T **
10900149-A-T **
10895798-T-A **
10876011-C-A **
10872376-C-A **
10862866-C-A **
10849665-C-A **
10828319-C-T **
10788956-G-T **
10771862-G-T **
10770639-A-G **
10758059-C-A **
10744535-A-T **
7395222-C-T 7527181-C-T **
9383795-G-C 9546186-G-C BY79010 **
16962-A-C **
5603453-T-A 5735412-T-A **
4908104-C-A 5040063-C-A **
6366353-T-A 6498312-T-A **
6124202-A-T 6256161-A-T **
6096234-T-A 6228193-T-A **
6063403-C-A 6195362-C-A **
4795256-A-T 4927215-A-T **
5969304-A-T 6101263-A-T **
5968464-T-G 6100423-T-G **
5935893-T-A 6067852-T-A **
7311551-T-A 7443510-T-A 14×TTCC**
5912024-G-T 6043983-G-T **
5755332-C-A 5887291-C-A **
5603444-T-A 5735403-T-A **
6589608-G-T 6721567-G-T **
5449326-C-T 5581285-C-T **
5219556-G-T 5351515-G-T **
5214390-C-A 5346349-C-A **
5213710-C-CTT 5345669-C-CTT 12×T**
5194132-T-G 5326091-T-G **
4795317-T-A 4927276-T-A **
5190151-T-C 5322110-T-C **
5072559-C-A 5204518-C-A **
4960453-C-A 5092412-C-A **
4949136-C-A 5081095-C-A **
4949126-C-A 5081085-C-A **
4931094-A-T 5063053-A-T **
6583061-G-T 6715020-G-T **
6580082-T-A 6712041-T-A **
6622905-T-A 6754864-T-A **
7201340-G-C 7333299-G-C **
7311492-C-G 7443451-C-G **
7240480-A-C 7372439-A-C **
7237299-C-A 7369258-C-A **
4721188-C-A 4853147-C-A **
7224158-T-G 7356117-T-G **
7223259-G-T 7355218-G-T **
7201393-T-A 7333352-T-A **
7201360-T-A 7333319-T-A **
4721298-A-T 4853257-A-T **
6648353-A-C 6780312-A-C **
7201350-T-A 7333309-T-A **
4759832-C-A 4891791-C-A **
7201351-T-A 7333310-T-A **
7188312-C-A 7320271-C-A **
6830713-G-C 6962672-G-C **
4795245-A-C 4927204-A-C **
6692089-C-A 6824048-C-A **
6765706-A-T 6897665-A-T **
6773786-C-T 6905745-C-T **
7152871-A-T 7284830-A-T **
6773825-C-G 6905784-C-G **
6856707-A-C 6988666-A-C **
6918286-C-A 7050245-C-A **
7040596-A-T 7172555-A-T **
7131368-TA-T 7263327-TA-T **
17950825-AATATATATATATATATATATATATATATATAT-A,AATATAT 15838945-AATATATATATATATATATATATATATATATAT-A,AATATAT 27×AT***
13474710-G-T 11319034-G-T ***
13453401-TTCC-T 11297725-TTCC-T ***
13453407-TCC-T 11297731-TCC-T ***
13458743-T-G 11303067-T-G ***
59012987-C-G 56866840-C-G ***
14464405-G-A 12343678-G-A ***
21846452-CTTTTT-C 19684566-CTTTTT-C 26×T***
13474705-A-G 11319029-A-G ***
10937434-CAATTC-CCATTC,G ***
13824865-C-A 11704159-C-A ***
19422976-C-A 17311096-C-A ***
13454662-C-A 11298986-C-A ***
56847467-G-T ***
16050986-CTCTTTCTTTCTCTT-C,CTCTTTCTTTCTT 13939106-CTCTTTCTTTCTCTT-C,CTCTTTCTTTCTT ***
2950223-GTATATA-G 3082182-GTATATA-G 10×TA***
7040036-GA-G 7171995-GA-G ***
9383781-C-T 9546172-C-T BY46980 ***
10878320-A-C,G ***
22961922-C-A 20800036-C-A ***
7255965-G-T 7387924-G-T ***
10926594-AC-A ***
10911719-C-T ***
10911712-T-G ***
10911700-G-C ***
10987821-T-A ***
10960495-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B192133987917480697507950447
Used in age calculations987917480697507950447
Counts of SNPs2225
Variant counts last updated 2019-07-03 01:06:41.



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