McPherson
BigY2: 279747MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 279747 |
---|---|---|---|---|---|---|---|
hg19:Y:22305445-T-A hg38:Y:20143559-T-A | DYZ19 | A* | |||||
hg19:Y:22305446-G-A hg38:Y:20143560-G-A | DYZ19 | A* | |||||
hg19:Y:17877604-G-A hg38:Y:15765724-G-A | BY118035 | Y | Y | + | |||
hg19:Y:17281941-TGATAGATA-T hg38:Y:15170061-TGATAGATA-T | 10×GATA | * | |||||
hg19:Y:22300575-A-G hg38:Y:20138689-A-G | DYZ19 | ** | |||||
hg19:Y:22300584-G-T hg38:Y:20138698-G-T | DYZ19 | ** | |||||
hg19:Y:28581630-GATATATAT-G hg38:Y:26435483-GATATATAT-G | 19×AT | ** | |||||
hg19:Y:24271286-C-T hg38:Y:22125139-C-T | BY2223 | P3_b1 | ** | ||||
hg19:Y:58988327-T-G hg38:Y:56842180-T-G | ** | ||||||
hg19:Y:18196303-C-T hg38:Y:16084423-C-T | CTS8785 | ** | |||||
hg19:Y:13461283-G-A hg38:Y:11305607-G-A | ** | ||||||
hg19:Y:13603141-C-A hg38:Y:11447465-C-A | ** | ||||||
hg19:Y:13333705-C-A hg38:Y:11178029-C-A | ** | ||||||
hg19:Y:19748810-C-A hg38:Y:17636930-C-A | P5_Prx | ** | |||||
hg19:Y:13461237-T-C hg38:Y:11305561-T-C | ** | ||||||
hg19:Y:13461252-G-T hg38:Y:11305576-G-T | ** | ||||||
hg19:Y:13461312-C-T hg38:Y:11305636-C-T | ** | ||||||
hg19:Y:15049918-C-A hg38:Y:12938009-C-A | 18×A | ** | |||||
hg19:Y:58862798-G-A hg38:Y:56728073-C-T | ** | ||||||
hg19:Y:58840812-A-G hg38:Y:56750059-T-C | ** | ||||||
hg19:Y:27952126-TATAC-T hg38:Y:25805979-TATAC-T | P1_Y2 | ** | |||||
hg19:Y:19275209-C-T hg38:Y:17163329-C-T | ** | ||||||
hg38:Y:11666240-G-T | DYZ17 | ** | |||||
hg19:Y:19622056-C-A hg38:Y:17510176-C-A | P5_Prx | ** | |||||
hg38:Y:10776016-A-T | ** | ||||||
hg38:Y:10765758-C-G | ** | ||||||
hg19:Y:14671593-G-T hg38:Y:12559659-G-T | ** | ||||||
hg38:Y:10898414-G-A | ** | ||||||
hg38:Y:11030269-TGG-T | ** | ||||||
hg38:Y:11030276-A-C | ** | ||||||
hg38:Y:11030278-C-CTT | ** | ||||||
hg38:Y:11030283-C-T | ** | ||||||
hg38:Y:10919886-T-C | ** | ||||||
hg38:Y:10919912-T-G | ** | ||||||
hg38:Y:11016217-T-C | ** | ||||||
hg38:Y:10899946-C-T | ** | ||||||
hg19:Y:21554473-ATTTT-A hg38:Y:19392587-ATTTT-A | 17×T | ** | |||||
hg38:Y:11666176-A-T | DYZ17 | ** | |||||
hg38:Y:11666210-C-A | DYZ17 | ** | |||||
hg38:Y:11666213-T-C | DYZ17 | ** | |||||
hg38:Y:11666221-G-T | DYZ17 | ** | |||||
hg38:Y:11666228-G-T | DYZ17 | ** | |||||
hg38:Y:10807183-T-TCC | ** | ||||||
hg38:Y:10807188-C-T | ** | ||||||
hg38:Y:10807189-C-G | ** | ||||||
hg38:Y:10807196-T-G | ** | ||||||
hg38:Y:10807199-A-G | ** | ||||||
hg19:Y:22649481-C-A hg38:Y:20487595-C-A | ** | ||||||
hg19:Y:25937204-T-G hg38:Y:23791057-T-G | P1_Y1 | ** | |||||
hg38:Y:11015677-G-C | ** | ||||||
hg38:Y:11015758-T-A | ** | ||||||
hg19:Y:28081883-A-C hg38:Y:25935736-A-C | P1_Y2 | 8×AC | ** | ||||
hg38:Y:10927861-G-T | ** | ||||||
hg19:Y:22132482-C-A hg38:Y:19970596-C-A | ** | ||||||
hg38:Y:10762988-CTCCTT-C | ** | ||||||
hg19:Y:16037243-C-A hg38:Y:13925363-C-A | ** | ||||||
hg38:Y:10899968-T-C | ** | ||||||
hg19:Y:20557677-T-A hg38:Y:18395791-T-A | P5_Dst | ** | |||||
hg38:Y:10852726-C-G | ** | ||||||
hg19:Y:14089725-C-A hg38:Y:11969019-C-A | ** | ||||||
hg38:Y:10987411-C-T | ** | ||||||
hg19:Y:17584173-C-A hg38:Y:15472293-C-A | ** | ||||||
hg38:Y:10927800-T-A | ** | ||||||
hg38:Y:11643690-A-C | DYZ17 | ** | |||||
hg38:Y:11029252-G-T | ** | ||||||
hg19:Y:6934714-GTTTT-G hg38:Y:7066673-GTTTT-G | 15×T | ** | |||||
hg38:Y:11016231-C-A | ** | ||||||
hg38:Y:56728093-C-T | ** | ||||||
hg38:Y:10899948-T-A | ** | ||||||
hg38:Y:10927848-C-A | ** | ||||||
hg38:Y:10927860-A-T | ** | ||||||
hg38:Y:10796103-A-C | ** | ||||||
hg19:Y:4871129-G-GC hg38:Y:5003088-G-GC | 9×C | ** | |||||
hg19:Y:13708914-G-T hg38:Y:11553238-G-T | DYZ17 | ** | |||||
hg19:Y:19739391-G-T hg38:Y:17627511-G-T | P5_Prx | ** | |||||
hg19:Y:14743726-C-A hg38:Y:12631795-C-A | ** | ||||||
hg19:Y:13235619-C-A hg38:Y:11079943-C-A | ** | ||||||
hg38:Y:11023156-C-T | ** | ||||||
hg19:Y:26121367-G-GTA hg38:Y:23975220-G-GTA | P1_Y1 | ** | |||||
hg38:Y:56749981-G-T | ** | ||||||
hg19:Y:13468079-G-T hg38:Y:11312403-G-T | ** | ||||||
hg38:Y:10672246-T-C | ** | ||||||
hg38:Y:10844180-C-T | ** | ||||||
hg38:Y:11030251-A-T | ** | ||||||
hg19:Y:3407873-CA-C hg38:Y:3539832-CA-C | 8×A | ** | |||||
hg38:Y:10776127-TTCCGC-T | ** | ||||||
hg38:Y:10912648-T-A | ** | ||||||
hg38:Y:10807405-T-C | ** | ||||||
hg19:Y:28699751-C-A hg38:Y:26553604-C-A | ** | ||||||
hg19:Y:13461335-T-A hg38:Y:11305659-T-A | ** | ||||||
hg38:Y:10976196-C-A | FT438833 | ** | |||||
hg19:Y:13643742-C-A hg38:Y:11488066-C-A | ** | ||||||
hg19:Y:28549447-G-C hg38:Y:26403300-G-C | ** | ||||||
hg38:Y:10654619-C-A | ** | ||||||
hg38:Y:10809586-T-A | ** | ||||||
hg19:Y:6357988-G-T hg38:Y:6489947-G-T | ** | ||||||
hg19:Y:13708936-A-G hg38:Y:11553260-A-G | DYZ17 | ** | |||||
hg19:Y:13472041-C-T hg38:Y:11316365-C-T | ** | ||||||
hg38:Y:10868747-C-A | ** | ||||||
hg38:Y:10919881-T-G | ** | ||||||
hg38:Y:10919885-C-T | ** | ||||||
hg38:Y:10919890-G-C | ** | ||||||
hg38:Y:10919934-A-T | ** | ||||||
hg38:Y:10919944-A-G | ** | ||||||
hg38:Y2:4734-C-T | ** | ||||||
hg38:Y:10986148-T-C | ** | ||||||
hg19:Y:24672678-G-T hg38:Y:22526531-G-T | P3_b2 | ** | |||||
hg19:Y:13461296-A-T hg38:Y:11305620-A-T | ** | ||||||
hg19:Y:13461303-T-A hg38:Y:11305627-T-A | ** | ||||||
hg19:Y:13461316-G-C hg38:Y:11305640-G-C | ** | ||||||
hg19:Y:13461322-T-A hg38:Y:11305646-T-A | ** | ||||||
hg19:Y:23004453-T-G hg38:Y:20842567-T-G | ** | ||||||
hg38:Y:10919949-T-G | ** | ||||||
hg38:Y:10919955-G-C | ** | ||||||
hg38:Y:10769847-G-T | ** | ||||||
hg38:Y:10950431-T-C | ** | ||||||
hg19:Y:20959461-C-A hg38:Y:18797575-C-A | P4_Dst | ** | |||||
hg38:Y:10792961-G-T | ** | ||||||
hg19:Y:28819307-A-C hg38:Y:26673160-A-C | ** | ||||||
hg38:Y:10936454-T-C | ** | ||||||
hg38:Y:10775984-C-G | ** | ||||||
hg38:Y:10919926-G-T | ** | ||||||
hg38:Y:10809579-C-A | ** | ||||||
hg19:Y:2790538-C-A hg38:Y:2922497-C-A | ** | ||||||
hg19:Y:15185398-C-A hg38:Y:13073484-C-A | ** | ||||||
hg19:Y:18688500-C-CAAAA hg38:Y:16576620-C-CAAAA | 20×A | ** | |||||
hg38:Y:11007802-G-C | ** | ||||||
hg19:Y:20865587-C-A hg38:Y:18703701-C-A | P4_Dst | ** | |||||
hg19:Y:5684381-G-T hg38:Y:5816340-G-T | ** | ||||||
hg38:Y:10961126-C-T | ** | ||||||
hg19:Y:4002364-C-A hg38:Y:4134323-C-A | ** | ||||||
hg38:Y:11015673-A-T | ** | ||||||
hg38:Y:10982205-A-G | ** | ||||||
hg19:Y:18346591-C-A hg38:Y:16234711-C-A | P6_Prx | ** | |||||
hg38:Y:11016232-C-T | ** | ||||||
hg38:Y:10667974-CACTAA-C | ** | ||||||
hg38:Y:10887352-C-A | ** | ||||||
hg19:Y:19223143-C-A hg38:Y:17111263-C-A | ** | ||||||
hg19:Y:8007899-G-T hg38:Y:8139858-G-T | ** | ||||||
hg38:Y:10924861-G-T | ** | ||||||
hg19:Y:13705520-G-A hg38:Y:11549844-G-A | DYZ17 | ** | |||||
hg38:Y:10964228-A-T | ** | ||||||
hg19:Y:4270710-C-A hg38:Y:4402669-C-A | ** | ||||||
hg19:Y:17876421-A-C hg38:Y:15764541-A-C | ** | ||||||
hg19:Y:8159636-C-A hg38:Y:8291595-C-A | ** | ||||||
hg38:Y:10825118-A-T | ** | ||||||
hg38:Y:10815293-A-T | ** | ||||||
hg19:Y:28793806-G-C hg38:Y:26647659-G-C | ** | ||||||
hg19:Y:28697903-C-A hg38:Y:26551756-C-A | ** | ||||||
hg19:Y:18733500-G-T hg38:Y:16621620-G-T | ** | ||||||
hg19:Y:14608296-TCTA-T hg38:Y:12496498-TCTA-T | ** | ||||||
hg38:Y:11015752-CAGT-C | ** | ||||||
hg19:Y:19683841-C-CAA hg38:Y:17571961-C-CAA | P5_Prx | 14×A | ** | ||||
hg19:Y:13708908-T-A hg38:Y:11553232-T-A | DYZ17 | ** | |||||
hg19:Y:15653590-A-C hg38:Y:13541710-A-C | ** | ||||||
hg19:Y:13643076-C-T hg38:Y:11487400-C-T | ** | ||||||
hg38:Y:11020278-CACTGA-C | ** | ||||||
hg38:Y:10947654-C-A | ** | ||||||
hg19:Y:14931872-C-A hg38:Y:12819937-C-A | ** | ||||||
hg38:Y:10898407-T-C | ** | ||||||
hg19:Y:25970716-A-T hg38:Y:23824569-A-T | P1_Y1 | ** | |||||
hg38:Y:10807389-C-T | ** | ||||||
hg38:Y:10807392-C-T | ** | ||||||
hg38:Y:10798476-C-A | ** | ||||||
hg38:Y:10684964-C-T | ** | ||||||
hg19:Y:13461233-G-A hg38:Y:11305557-G-A | ** | ||||||
hg19:Y:7127476-C-A hg38:Y:7259435-C-A | ** | ||||||
hg19:Y:13480575-A-T hg38:Y:11324899-A-T | ** | ||||||
hg19:Y:22517592-G-GA hg38:Y:20355706-G-GA | 9×A | ** | |||||
hg19:Y:18196305-G-A hg38:Y:16084425-G-A | ** | ||||||
hg19:Y:6465334-C-A hg38:Y:6597293-C-A | ** | ||||||
hg19:Y:24405313-C-A hg38:Y:22259166-C-A | ** | ||||||
hg38:Y:10663203-C-A | ** | ||||||
hg38:Y:11017340-G-T | ** | ||||||
hg38:Y:10900874-T-A | ** | ||||||
hg38:Y:10927808-A-T | ** | ||||||
hg19:Y:14561323-C-A hg38:Y:12449524-C-A | ** | ||||||
hg19:Y:2852653-C-A hg38:Y:2984612-C-A | ** | ||||||
hg19:Y:2852840-C-T hg38:Y:2984799-C-T | ** | ||||||
hg19:Y:2853482-C-A hg38:Y:2985441-C-A | ** | ||||||
hg19:Y:2949054-C-A hg38:Y:3081013-C-A | ** | ||||||
hg19:Y:3014418-C-A hg38:Y:3146377-C-A | ** | ||||||
hg19:Y:3125345-A-G hg38:Y:3257304-A-G | ** | ||||||
hg19:Y:3182603-G-T hg38:Y:3314562-G-T | ** | ||||||
hg19:Y:3183685-T-G hg38:Y:3315644-T-G | ** | ||||||
hg19:Y:3252415-C-A hg38:Y:3384374-C-A | ** | ||||||
hg19:Y:3274190-T-A hg38:Y:3406149-T-A | ** | ||||||
hg19:Y:3322919-T-G hg38:Y:3454878-T-G | ** | ||||||
hg19:Y:3329233-A-C hg38:Y:3461192-A-C | ** | ||||||
hg19:Y:3399311-G-T hg38:Y:3531270-G-T | ** | ||||||
hg19:Y:3431370-G-T hg38:Y:3563329-G-T | ** | ||||||
hg19:Y:3890228-T-A hg38:Y:4022187-T-A | ** | ||||||
hg19:Y:3890262-A-T hg38:Y:4022221-A-T | ** | ||||||
hg19:Y:4142504-A-T hg38:Y:4274463-A-T | ** | ||||||
hg19:Y:4221026-A-C hg38:Y:4352985-A-C | ** | ||||||
hg19:Y:4439847-T-G hg38:Y:4571806-T-G | ** | ||||||
hg19:Y:4449152-T-G hg38:Y:4581111-T-G | ** | ||||||
hg19:Y:4588763-C-A hg38:Y:4720722-C-A | ** | ||||||
hg19:Y:4604223-C-A hg38:Y:4736182-C-A | ** | ||||||
hg19:Y:4734251-G-A hg38:Y:4866210-G-A | ** | ||||||
hg19:Y:5118645-G-T hg38:Y:5250604-G-T | ** | ||||||
hg19:Y:5187106-A-C hg38:Y:5319065-A-C | ** | ||||||
hg19:Y:5189365-C-T hg38:Y:5321324-C-T | ** | ||||||
hg19:Y:5266872-C-G hg38:Y:5398831-C-G | ** | ||||||
hg19:Y:5402824-T-G hg38:Y:5534783-T-G | ** | ||||||
hg19:Y:5555639-T-G hg38:Y:5687598-T-G | ** | ||||||
hg19:Y:5630924-T-A hg38:Y:5762883-T-A | ** | ||||||
hg19:Y:5649988-C-A hg38:Y:5781947-C-A | ** | ||||||
hg19:Y:5723379-T-A hg38:Y:5855338-T-A | ** | ||||||
hg19:Y:5829297-C-A hg38:Y:5961256-C-A | ** | ||||||
hg19:Y:5859123-A-C hg38:Y:5991082-A-C | ** | ||||||
hg19:Y:5860445-G-T hg38:Y:5992404-G-T | ** | ||||||
hg19:Y:5866348-A-T hg38:Y:5998307-A-T | ** | ||||||
hg19:Y:6063382-C-A hg38:Y:6195341-C-A | ** | ||||||
hg19:Y:6092058-G-T hg38:Y:6224017-G-T | ** | ||||||
hg19:Y:6105910-A-C hg38:Y:6237869-A-C | ** | ||||||
hg19:Y:6277426-A-C hg38:Y:6409385-A-C | IR3_Dst | ** | |||||
hg19:Y:6312840-A-C hg38:Y:6444799-A-C | IR3_Dst | ** | |||||
hg19:Y:6414973-A-T hg38:Y:6546932-A-T | ** | ||||||
hg19:Y:6455795-C-A hg38:Y:6587754-C-A | ** | ||||||
hg19:Y:6694792-C-A hg38:Y:6826751-C-A | ** | ||||||
hg19:Y:6765634-TGGTCG-T hg38:Y:6897593-TGGTCG-T | ** | ||||||
hg19:Y:6998093-G-T hg38:Y:7130052-G-T | ** | ||||||
hg19:Y:7081444-C-A hg38:Y:7213403-C-A | ** | ||||||
hg19:Y:7224233-C-A hg38:Y:7356192-C-A | ** | ||||||
hg19:Y:7885409-A-G hg38:Y:8017368-A-G | ** | ||||||
hg19:Y:8008032-C-T hg38:Y:8139991-C-T | ** | ||||||
hg19:Y:8008033-T-C hg38:Y:8139992-T-C | ** | ||||||
hg19:Y:8694116-A-C hg38:Y:8826075-A-C | ** | ||||||
hg19:Y:8731622-T-G hg38:Y:8863581-T-G | ** | ||||||
hg38:Y:9113528-T-G | ** | ||||||
hg38:Y:9118330-A-T | ** | ||||||
hg19:Y:9416853-C-A hg38:Y:9579244-C-A | ** | ||||||
hg19:Y:9499085-G-T hg38:Y:9661476-G-T | ** | ||||||
hg19:Y:9928581-G-T hg38:Y:10090972-G-T | ** | ||||||
hg19:Y:9965648-G-T hg38:Y:10128039-G-T | ** | ||||||
hg19:Y:10032646-G-T hg38:Y:10195037-G-T | ** | ||||||
hg19:Y:10060776-A-C hg38:Y:10223167-A-C | ** | ||||||
hg38:Y:10654941-C-A | ** | ||||||
hg38:Y:10657920-G-T | ** | ||||||
hg38:Y:10663487-T-G | ** | ||||||
hg38:Y:10666422-C-G | ** | ||||||
hg38:Y:10667023-CC-GA | ** | ||||||
hg38:Y:10686112-C-T | ** | ||||||
hg38:Y:10688515-TC-T | ** | ||||||
hg38:Y:10688599-T-G | ** | ||||||
hg38:Y:10748863-C-G | ** | ||||||
hg38:Y:10749512-A-C | ** | ||||||
hg38:Y:10752382-T-A | ** | ||||||
hg38:Y:10753536-CTCCAA-C | ** | ||||||
hg38:Y:10757327-T-G | ** | ||||||
hg38:Y:10763467-A-T | FT430145 | ** | |||||
hg38:Y:10763474-T-A | ** | ||||||
hg38:Y:10765777-T-C | ** | ||||||
hg38:Y:10767655-C-A | ** | ||||||
hg38:Y:10771263-C-A | ** | ||||||
hg38:Y:10778966-T-A | ** | ||||||
hg38:Y:10779000-C-G | ** | ||||||
hg38:Y:10779026-C-A | ** | ||||||
hg38:Y:10786811-CCACAA-C | ** | ||||||
hg38:Y:10786940-T-C | ** | ||||||
hg38:Y:10791475-A-C | ** | ||||||
hg38:Y:10798415-C-A | ** | ||||||
hg38:Y:10807511-A-ATTCCT | ** | ||||||
hg38:Y:10809591-T-CCCCAC | ** | ||||||
hg38:Y:10812932-A-T | ** | ||||||
hg38:Y:10812937-A-T | ** | ||||||
hg38:Y:10815353-T-G | ** | ||||||
hg38:Y:10838236-C-A | ** | ||||||
hg38:Y:10845871-C-A | FT433846 | ** | |||||
hg38:Y:10845887-CTTCCG-C | ** | ||||||
hg38:Y:10847030-T-C | ** | ||||||
hg38:Y:10848242-C-A | ** | ||||||
hg38:Y:10856617-C-A | ** | ||||||
hg38:Y:10860243-C-T | ** | ||||||
hg38:Y:10864725-T-G | ** | ||||||
hg38:Y:10865316-C-T | ** | ||||||
hg38:Y:10866514-C-G | ** | ||||||
hg38:Y:10875217-T-G | ** | ||||||
hg38:Y:10883791-C-A | ** | ||||||
hg38:Y:10884237-C-A | ** | ||||||
hg38:Y:10885822-T-G | ** | ||||||
hg38:Y:10887311-G-A | ** | ||||||
hg38:Y:10888479-T-C | ** | ||||||
hg38:Y:10889817-C-G | ** | ||||||
hg38:Y:10898410-C-T | ** | ||||||
hg38:Y:10898412-A-C | ** | ||||||
hg38:Y:10898413-T-A | ** | ||||||
hg38:Y:10898425-T-C | ** | ||||||
hg38:Y:10918013-A-C | ** | ||||||
hg38:Y:10927791-T-C | FT436848 | ** | |||||
hg38:Y:10927807-T-A | ** | ||||||
hg38:Y:10932887-T-C | ** | ||||||
hg38:Y:10932907-CTCCAT-C | ** | ||||||
hg38:Y:10934051-C-A | ** | ||||||
hg38:Y:10936533-G-T | ** | ||||||
hg38:Y:10936909-T-G | ** | ||||||
hg38:Y:10937861-A-C | ** | ||||||
hg38:Y:10941444-C-A | ** | ||||||
hg38:Y:10943064-T-A | ** | ||||||
hg38:Y:10943375-T-A | ** | ||||||
hg38:Y:10943382-A-ATAACT | ** | ||||||
hg38:Y:10943422-T-A | ** | ||||||
hg38:Y:10943432-T-A | ** | ||||||
hg38:Y:10960603-G-T | ** | ||||||
hg38:Y:10960610-T-G | ** | ||||||
hg38:Y:10961193-T-G | ** | ||||||
hg38:Y:10968684-T-A | ** | ||||||
hg38:Y:10977844-T-TC | ** | ||||||
hg38:Y:10977847-TC-T | ** | ||||||
hg38:Y:10979852-C-A | ** | ||||||
hg38:Y:10982380-C-G | ** | ||||||
hg38:Y:10982385-CCAATCAATTCCATTCCA-C | ** | ||||||
hg38:Y:10986138-T-C | ** | ||||||
hg38:Y:10986141-T-A | ** | ||||||
hg38:Y:10987418-C-G | ** | ||||||
hg38:Y:10997162-T-A | ** | ||||||
hg38:Y:10999113-A-T | ** | ||||||
hg38:Y:10999948-C-A | ** | ||||||
hg38:Y:11004965-A-C | ** | ||||||
hg38:Y:11015746-CTA-C | ** | ||||||
hg38:Y:11016642-T-A | ** | ||||||
hg38:Y:11016646-T-A | ** | ||||||
hg38:Y:11019448-C-CCCCTG | ** | ||||||
hg38:Y:11019458-C-T | ** | ||||||
hg38:Y:11027167-T-C | ** | ||||||
hg38:Y:11031308-T-C | ** | ||||||
hg19:Y:13217268-T-A hg38:Y:11061592-T-A | ** | ||||||
hg19:Y:13299146-C-A hg38:Y:11143470-C-A | ** | ||||||
hg19:Y:13371167-C-A hg38:Y:11215491-C-A | ** | ||||||
hg19:Y:13486867-A-T hg38:Y:11331191-A-T | ** | ||||||
hg19:Y:13510967-T-G hg38:Y:11355291-T-G | ** | ||||||
hg19:Y:13606650-T-G hg38:Y:11450974-T-G | ** | ||||||
hg19:Y:13708897-A-T hg38:Y:11553221-A-T | DYZ17 | ** | |||||
hg38:Y:11644327-AGAATG-A | DYZ17 | ** | |||||
hg38:Y:11644870-A-T | DYZ17 | ** | |||||
hg38:Y:11677302-GGAA-G | DYZ17 | ** | |||||
hg19:Y:13872794-C-A hg38:Y:11752088-C-A | ** | ||||||
hg19:Y:13910016-C-A hg38:Y:11789310-C-A | ** | ||||||
hg19:Y:13927247-C-G hg38:Y:11806541-C-G | ** | ||||||
hg19:Y:13953100-T-G hg38:Y:11832394-T-G | ** | ||||||
hg19:Y:13958802-T-G hg38:Y:11838096-T-G | ** | ||||||
hg19:Y:14025907-G-T hg38:Y:11905201-G-T | ** | ||||||
hg19:Y:14100220-T-G hg38:Y:11979514-T-G | ** | ||||||
hg19:Y:14118420-C-A hg38:Y:11997714-C-A | ** | ||||||
hg19:Y:14118427-T-A hg38:Y:11997721-T-A | ** | ||||||
hg19:Y:14232817-T-A hg38:Y:12112111-T-A | ** | ||||||
hg19:Y:14232829-T-G hg38:Y:12112123-T-G | ** | ||||||
hg19:Y:14366482-C-A hg38:Y:12245777-C-A | ** | ||||||
hg19:Y:14384522-T-G hg38:Y:12263818-T-G | ** | ||||||
hg19:Y:14513150-C-A hg38:Y:12401355-C-A | ** | ||||||
hg19:Y:14685808-A-C hg38:Y:12573874-A-C | ** | ||||||
hg19:Y:14688547-T-C hg38:Y:12576613-T-C | ** | ||||||
hg19:Y:14888021-C-A hg38:Y:12776087-C-A | ** | ||||||
hg19:Y:15080757-C-A hg38:Y:12968847-C-A | ** | ||||||
hg19:Y:15128145-TG-T hg38:Y:13016232-TG-T | ** | ||||||
hg19:Y:15179893-A-C hg38:Y:13067979-A-C | ** | ||||||
hg19:Y:15342650-CT-C hg38:Y:13230769-CT-C | ** | ||||||
hg19:Y:15395486-G-T hg38:Y:13283606-G-T | ** | ||||||
hg19:Y:15542129-T-A hg38:Y:13430249-T-A | ** | ||||||
hg19:Y:15863156-A-AC hg38:Y:13751276-A-AC | ** | ||||||
hg19:Y:16130511-G-T hg38:Y:14018631-G-T | P8_Prx | ** | |||||
hg19:Y:16240732-T-C hg38:Y:14128852-T-C | ** | ||||||
hg19:Y:16968186-A-T hg38:Y:14856306-A-T | ** | ||||||
hg19:Y:17012838-A-C hg38:Y:14900958-A-C | ** | ||||||
hg19:Y:17012842-G-T hg38:Y:14900962-G-T | ** | ||||||
hg19:Y:17246023-A-G hg38:Y:15134143-A-G | ** | ||||||
hg19:Y:17254890-A-T hg38:Y:15143010-A-T | ** | ||||||
hg19:Y:17276377-C-A hg38:Y:15164497-C-A | ** | ||||||
hg19:Y:17319918-A-C hg38:Y:15208038-A-C | ** | ||||||
hg19:Y:17376310-C-A hg38:Y:15264430-C-A | ** | ||||||
hg19:Y:17376919-C-A hg38:Y:15265039-C-A | ** | ||||||
hg19:Y:17402454-A-T hg38:Y:15290574-A-T | ** | ||||||
hg19:Y:17588994-C-A hg38:Y:15477114-C-A | ** | ||||||
hg19:Y:17993805-G-C hg38:Y:15881925-G-C | P7_Prx | ** | |||||
hg19:Y:17993817-T-A hg38:Y:15881937-T-A | P7_Prx | ** | |||||
hg19:Y:18183964-G-T hg38:Y:16072084-G-T | ** | ||||||
hg19:Y:18191524-A-C hg38:Y:16079644-A-C | ** | ||||||
hg19:Y:18191554-A-C hg38:Y:16079674-A-C | ** | ||||||
hg19:Y:18196277-G-A hg38:Y:16084397-G-A | ** | ||||||
hg19:Y:18196283-T-C hg38:Y:16084403-T-C | ** | ||||||
hg19:Y:18196293-A-C hg38:Y:16084413-A-C | ** | ||||||
hg19:Y:18196298-T-C hg38:Y:16084418-T-C | ** | ||||||
hg19:Y:18274240-C-G hg38:Y:16162360-C-G | P6_Prx | ** | |||||
hg19:Y:18622423-C-A hg38:Y:16510543-C-A | ** | ||||||
hg19:Y:18953059-A-T hg38:Y:16841179-A-T | 8×G | ** | |||||
hg19:Y:19385216-C-A hg38:Y:17273336-C-A | ** | ||||||
hg19:Y:19436764-G-T hg38:Y:17324884-G-T | 12×AGAA | ** | |||||
hg19:Y:19517948-T-A hg38:Y:17406068-T-A | ** | ||||||
hg19:Y:19595406-G-T hg38:Y:17483526-G-T | P5_Prx | ** | |||||
hg19:Y:19678821-T-TG hg38:Y:17566941-T-TG | P5_Prx | ** | |||||
hg19:Y:19719366-A-T hg38:Y:17607486-A-T | P5_Prx | ** | |||||
hg19:Y:19920479-A-C hg38:Y:17808599-A-C | P5_Prx | ** | |||||
hg19:Y:19961845-T-G hg38:Y:17849965-T-G | P5_Prx | ** | |||||
hg19:Y:20340094-C-A hg38:Y:18178208-C-A | P5_Dst | ** | |||||
hg19:Y:20405919-G-T hg38:Y:18244033-G-T | P5_Dst | ** | |||||
hg19:Y:20405946-G-T hg38:Y:18244060-G-T | P5_Dst | ** | |||||
hg19:Y:20405963-C-G hg38:Y:18244077-C-G | P5_Dst | ** | |||||
hg19:Y:20430496-A-T hg38:Y:18268610-A-T | P5_Dst | ** | |||||
hg19:Y:20430527-A-T hg38:Y:18268641-A-T | P5_Dst | ** | |||||
hg19:Y:20430550-C-G hg38:Y:18268664-C-G | P5_Dst | ** | |||||
hg19:Y:20430561-A-T hg38:Y:18268675-A-T | P5_Dst | ** | |||||
hg19:Y:20430573-A-T hg38:Y:18268687-A-T | P5_Dst | ** | |||||
hg19:Y:20667077-T-C hg38:Y:18505191-T-C | P4_Prx | ** | |||||
hg19:Y:20885826-G-T hg38:Y:18723940-G-T | P4_Dst | ** | |||||
hg19:Y:20885831-G-T hg38:Y:18723945-G-T | P4_Dst | ** | |||||
hg19:Y:20885850-C-A hg38:Y:18723964-C-A | P4_Dst | ** | |||||
hg19:Y:20974848-G-C hg38:Y:18812962-G-C | P4_Dst | ** | |||||
hg19:Y:21162969-A-T hg38:Y:19001083-A-T | ** | ||||||
hg19:Y:21276577-G-T hg38:Y:19114691-G-T | Y105929 | ** | |||||
hg19:Y:21391619-G-A hg38:Y:19229733-G-A | ** | ||||||
hg19:Y:22040965-T-A hg38:Y:19879079-T-A | ** | ||||||
hg19:Y:22295956-G-T hg38:Y:20134070-G-T | DYZ19 | ** | |||||
hg19:Y:22639422-C-A hg38:Y:20477536-C-A | ** | ||||||
hg19:Y:22651333-A-C hg38:Y:20489447-A-C | ** | ||||||
hg19:Y:22874538-G-T hg38:Y:20712652-G-T | ** | ||||||
hg19:Y:23062755-C-A hg38:Y:20900869-C-A | ** | ||||||
hg19:Y:24404226-G-T hg38:Y:22258079-G-T | ** | ||||||
hg19:Y:25521970-T-G hg38:Y:23375823-T-G | P1_gr1 | ** | |||||
hg19:Y:25733071-T-A hg38:Y:23586924-T-A | P1_b3 | ** | |||||
hg19:Y:25869767-A-C hg38:Y:23723620-A-C | P1_Y1 | ** | |||||
hg19:Y:25892207-ATGTG-A hg38:Y:23746060-ATGTG-A | P1_Y1 | 11×TG | ** | ||||
hg19:Y:25954293-T-G hg38:Y:23808146-T-G | P1_Y1 | ** | |||||
hg19:Y:26248260-G-T hg38:Y:24102113-G-T | P1_Y1 | ** | |||||
hg19:Y:26699306-C-A hg38:Y:24553159-C-A | P1_g2 | ** | |||||
hg19:Y:27897348-G-T hg38:Y:25751201-G-T | P1_Y2 | ** | |||||
hg19:Y:28370015-TAGAGAGAG-T hg38:Y:26223868-TAGAGAGAG-T | P1_gr2 | 16×AG | ** | ||||
hg19:Y:28550438-A-C hg38:Y:26404291-A-C | ** | ||||||
hg19:Y:28608393-C-A hg38:Y:26462246-C-A | ** | ||||||
hg19:Y:28608517-T-G hg38:Y:26462370-T-G | ** | ||||||
hg19:Y:28642268-C-A hg38:Y:26496121-C-A | ** | ||||||
hg19:Y:28758178-A-C hg38:Y:26612031-A-C | ** | ||||||
hg38:Y:56678028-G-A | ** | ||||||
hg38:Y:56678035-C-T | BY50419 | ** | |||||
hg38:Y:56728049-A-C | ** | ||||||
hg38:Y:56728054-A-C | ** | ||||||
hg38:Y:56728061-T-G | ** | ||||||
hg38:Y:56840476-G-T | ** | ||||||
hg38:Y:56842190-T-A | ** | ||||||
hg38:Y:56842196-A-C | ** | ||||||
hg38:Y:56849814-C-A | ** | ||||||
hg38:Y:56863370-A-C | ** | ||||||
hg38:Y2:4732-T-C | ** | ||||||
hg38:Y2:4740-G-C | ** | ||||||
hg38:Y2:4778-G-A | ** | ||||||
hg19:Y:2708483-C-A hg38:Y:2840442-C-A | *** | ||||||
hg38:Y:10965647-T-C | *** | ||||||
hg19:Y:6878073-CAAAA-C hg38:Y:7010032-CAAAA-C | 17×A | *** | |||||
hg38:Y:11009066-C-T | *** | ||||||
hg19:Y:23281361-ATT-A hg38:Y:21119475-ATT-A | 14×T | *** | |||||
hg19:Y:9956411-C-A hg38:Y:10118802-C-A | *** | ||||||
hg19:Y:13453683-T-A hg38:Y:11298007-T-A | 5×ATTCC | *** | |||||
hg19:Y:13453399-C-T hg38:Y:11297723-C-T | *** | ||||||
hg38:Y:11022983-A-T | *** | ||||||
hg19:Y:13453392-T-TCAATA hg38:Y:11297716-T-TCAATA | *** | ||||||
hg38:Y:11018821-C-A | *** | ||||||
hg19:Y:9063859-CTT-C,CT hg38:Y:9226250-CTT-C,CT | 16×T | *** | |||||
hg19:Y:24381425-C-A hg38:Y:22235278-C-A | *** | ||||||
hg19:Y:7254614-C-A hg38:Y:7386573-C-A | *** | ||||||
hg19:Y:8016938-CT-C,CTT hg38:Y:8148897-CT-C,CTT | 25×T | *** | |||||
hg38:Y:10689784-C-A | *** | ||||||
hg38:Y:10924389-CTTTAT-C,CTCCAG | *** | ||||||
hg38:Y:10945478-C-T | *** | ||||||
hg19:Y:13255086-C-T hg38:Y:11099410-C-T | *** | ||||||
hg19:Y:13255087-C-G hg38:Y:11099411-C-G | *** | ||||||
hg19:Y:13847244-G-T hg38:Y:11726538-G-T | DYZ17 | *** | |||||
hg19:Y:15207955-A-AT hg38:Y:13096041-A-AT | 8×T | *** | |||||
hg19:Y:15215579-C-T hg38:Y:13103665-C-T | *** | ||||||
hg19:Y:17601355-C-A hg38:Y:15489475-C-A | *** | ||||||
hg19:Y:19049467-C-A hg38:Y:16937587-C-A | *** | ||||||
hg19:Y:22950342-G-T hg38:Y:20788456-G-T | *** | ||||||
hg19:Y:28795725-GAAATT-G hg38:Y:26649578-GAAATT-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 279747 | 10117506 | 8201588 | 8046841 |
Used in age calculations | 10117506 | 8201588 | 8046841 |
Counts of SNPs | 1 | 1 |
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