Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ZZ5 > BY25447 > BY13693 > Y134042

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
N245123
18303564-T-C 16191684-T-C P6_Prx A*
22306108-G-A 20144222-G-A DYZ19 A*
26401265-G-A 24255118-G-A P1_Y1 A*
22276813-G-T 20114927-G-T DYZ19 A*
22282378-G-A 20120492-G-A DYZ19 A*
20728579-C-A 18566693-C-A P4_Prx A*
13687617-G-A 11531941-G-A A*
23533131-T-G 21371245-T-G Y134885 YY+
17204343-G-A 15092463-G-A BY38481 YY+
9507327-A-G 9669718-A-G BY38479 +
9457936-A-G 9620327-A-G Y134883 YY+
9422640-TCAAA-T 9585031-TCAAA-T +
22478693-A-G 20316807-A-G BY38483 DYZ19 +
21658788-C-A 19496902-C-A BY38482 YY+
14551321-G-A 12439522-G-A Z6453 YY+
22477950-T-G 20316064-T-G YP1256 DYZ19 +
8556951-G-A 8688910-G-A Y134893 YY+
17589785-G-T 15477905-G-T Y134889 YY+
16824143-G-T 14712263-G-T Y134884 YY+
18570642-C-T 16458762-C-T Y134892 YY+
22605797-T-C 20443911-T-C Y134887 YY+
8109694-G-A 8241653-G-A BY38478 YY+
18163030-TG-T 16051150-TG-T +
9517544-G-A 9679935-G-A BY38480 +
24412948-A-G 22266801-A-G Y134888 Y+
21477480-G-C 19315594-G-C Y134894 YY+
15357457-T-C 13245576-T-C Y134881 YY+
15696338-C-T 13584458-C-T Y134890 YY+
9809427-G-GA 9971818-G-GA +
14925595-A-G 12813660-A-G Y134886 YY+
14021-A-C +
16482302-T-C 14370422-T-C BY108105 YY+
15371743-C-T 13259863-C-T Y134882 YY+
6478813-T-TTTTG 6610772-T-TTTTG 6×TTTG*
28797713-G-A 26651566-G-A *
22318560-C-A 20156674-C-A DYZ19 *
17383849-TGATGAGATGA-T 15271969-TGATGAGATGA-T 8×GATGA*
13934928-T-C 11814222-T-C **
13935834-C-A 11815128-C-A **
13940924-AGG-A 11820218-AGG-A **
13726197-A-T 11570521-A-T **
13943097-G-T 11822391-G-T **
13943207-C-A 11822501-C-A **
13958868-C-T 11838162-C-T **
13726183-A-T 11570507-A-T **
13726232-A-T 11570556-A-T **
11662621-C-A **
13909001-T-G 11788295-T-G 11×A**
13908465-C-A 11787759-C-A **
11650134-A-C **
13809374-T-G 11688668-T-G **
13907684-C-A 11786978-C-A **
13896960-A-T 11776254-A-T **
11666175-A-T **
13896211-A-C 11775505-A-C **
13800772-T-G 11680066-T-G **
13895918-C-A 11775212-C-A **
13895897-A-C 11775191-A-C **
13809343-T-C 11688637-T-C **
13809373-G-T 11688667-G-T **
13885445-A-C 11764739-A-C **
13885487-C-A 11764781-C-A **
26129378-C-A 23983231-C-A P1_Y1 **
13962626-C-A 11841920-C-A **
14965383-A-T 12853458-A-T **
14635520-T-G 12523589-T-G **
14671738-T-A 12559804-T-A **
14726598-A-C 12614666-A-C **
14786472-C-A 12674542-C-A **
14787806-G-A 12675876-G-A 11×TA**
14965358-A-G 12853433-A-G **
15012480-A-T 12900568-A-T **
14630554-C-A 12518623-C-A **
15066071-C-A 12954163-C-A **
15119657-C-A 13007744-C-A **
15126896-A-T 13014983-A-T **
15177964-C-A 13066050-C-A **
15619242-T-G 13507362-T-G **
15619256-T-G 13507376-T-G **
15623264-G-A 13511384-G-A **
14635501-T-G 12523570-T-G **
14630479-TC-T 12518548-TC-T **
14046657-A-C 11925951-A-C **
13710345-A-T 11554669-A-T **
14077185-A-C 11956479-A-C **
14101713-C-T 11981007-C-T **
14107582-C-A 11986876-C-A **
14114544-A-C 11993838-A-C **
14191976-G-T 12071270-G-T **
14226540-T-A 12105834-T-A **
14226554-T-A 12105848-T-A **
14569522-G-T 12457722-G-T **
14261701-A-T 12140995-A-T **
14300701-A-C 12179995-A-C **
14367934-G-T 12247230-G-T **
14429375-C-T 12308650-C-T **
14447353-T-A 12326626-T-A **
14456434-G-T 12335707-G-T **
14564107-C-A 12452307-C-A **
13726182-A-T 11570506-A-T **
11037174-A-C **
13700706-A-T 11545030-A-T **
10872261-T-C **
10832467-T-G **
10842547-T-G **
10844216-T-A **
10860553-C-A **
10866975-C-A **
10872246-C-T **
10872272-A-C **
10821132-C-T **
10872282-A-G **
10880476-C-A **
10911767-T-C **
10913618-G-T **
10920645-A-T **
10920699-T-A **
10923604-C-A **
10829446-C-A **
10817504-T-C **
10933627-T-G **
10781103-G-A **
10755293-AT-A **
10764181-C-T **
10764183-A-C **
10765403-C-T **
10780515-T-G **
10780520-T-C **
10786478-C-T **
10817502-T-G **
10788045-T-A **
10795731-C-A **
10801048-T-C **
10801788-T-C **
10805692-T-G **
10805846-A-C **
10813061-T-A **
10927572-A-T **
10937531-G-T **
13700678-T-G 11545002-T-G **
11028228-T-G **
11019990-A-T **
11022667-T-A **
11022675-T-A **
11022688-G-T **
11022702-G-C **
11026105-C-G **
15687930-T-G 13576050-T-G **
10999309-G-T **
13196614-T-C 11040938-T-C **
13223455-G-A 11067779-G-A **
13445340-G-T 11289664-G-T **
13445360-GAC-G 11289684-GAC-G **
13558330-A-T 11402654-A-T **
13595624-C-A 11439948-C-A **
13624189-C-A 11468513-C-A **
11003680-T-C **
10995832-T-C **
10940286-C-A **
10974785-C-CT **
10948067-C-A **
10959551-T-G **
10963043-C-A **
10972653-C-A **
10974332-C-A **
10974777-C-T **
10974782-CT-C **
10974789-A-C **
10981010-C-A **
10974804-G-T **
10974806-TCCACTCCATG-T **
10974833-C-T **
10976058-A-T **
10976082-A-T **
10976483-C-A **
10980196-A-T **
15662753-C-A 13550873-C-A **
16430955-G-A 14319075-G-A **
15740793-T-C 13628913-T-C **
23036678-CAAAA-C 20874792-CAAAA-C 21×A**
22436228-T-A 20274342-T-A DYZ19 **
22517618-T-G 20355732-T-G **
22535895-A-G 20374009-A-G **
22547828-T-G 20385942-T-G **
22703625-AG-T 20541739-AG-T **
23002813-A-T 20840927-A-T **
23079208-T-C 20917322-T-C **
22436218-T-A 20274332-T-A DYZ19 **
23199814-A-C 21037928-A-C **
23570011-T-A 21408125-T-A **
24305273-A-T 22159126-A-T P3_t1 **
24446912-T-G 22300765-T-G **
24624539-G-GTGTT 22478392-G-GTGTT P3_t2 **
24626316-C-A 22480169-C-A P3_t2 **
25860793-C-A 23714646-C-A P1_Y1 **
22436222-G-A 20274336-G-A DYZ19 **
22436204-T-A 20274318-T-A DYZ19 **
25860825-C-A 23714678-C-A P1_Y1 **
21998249-G-T 19836363-G-T **
21134886-A-C 18973000-A-C **
21255935-C-A 19094049-C-A **
21472323-C-A 19310437-C-A **
21500346-T-G 19338460-T-G **
21585095-T-C 19423209-T-C **
21853677-CAAAAAAAAAAAAAAAAAAAAA-C 19691791-CAAAAAAAAAAAAAAAAAAAAA-C 43×A**
22084784-C-A 19922898-C-A **
22436199-C-A 20274313-C-A DYZ19 **
22092965-T-C 19931079-T-C **
22100822-A-C 19938936-A-C **
22296294-C-A 20134408-C-A DYZ19 **
22309965-C-A 20148079-C-A BY177816 DYZ19 **
22436172-T-A 20274286-T-A DYZ19 **
22436185-G-T 20274299-G-T DYZ19 **
22436190-G-T 20274304-G-T DYZ19 **
25860823-C-A 23714676-C-A P1_Y1 **
25860858-C-A 23714711-C-A P1_Y1 **
21111830-C-A 18949944-C-A **
32742-T-A **
28755878-T-G 26609731-T-G **
28818223-A-T 26672076-A-T **
56840112-T-C **
56851556-T-C **
56884376-GTA-G **
32736-T-C **
32746-A-G **
28684670-G-T 26538523-G-T **
32748-G-T **
32781-T-G **
32801-G-T **
32817-G-A **
32820-C-G **
32821-A-C **
32846-T-A **
28703376-A-C 26557229-A-C **
28684644-T-A 26538497-T-A **
26047129-C-A 23900982-C-A P1_Y1 **
26421477-TGTG-T 24275330-TGTG-T P1_Y1 **
26047139-C-A 23900992-C-A P1_Y1 **
26047168-C-A 23901021-C-A P1_Y1 **
26099042-A-T 23952895-A-T P1_Y1 **
26124352-A-G 23978205-A-G P1_Y1 **
26129365-G-T 23983218-G-T P1_Y1 **
26204525-G-A 24058378-G-A P1_Y1 **
26415859-G-T 24269712-G-T P1_Y1 **
27791849-C-T 25645702-C-T P1_Y2 **
28659609-C-A 26513462-C-A **
27898282-G-T 25752135-G-T P1_Y2 **
27932575-T-C 25786428-T-C P1_Y2 **
27932577-T-A 25786430-T-A P1_Y2 **
27932595-T-A 25786448-T-A P1_Y2 **
28526871-C-A 26380724-C-A **
28549190-C-A 26403043-C-A **
28566989-C-A 26420842-C-A **
21111838-G-T 18949952-G-T **
21002538-T-TCG 18840652-T-TCG P4_Dst **
15741179-T-A 13629299-T-A **
17500436-T-G 15388556-T-G **
17014580-C-A 14902700-C-A **
17093562-A-T 14981682-A-T **
17095445-C-A 14983565-C-A **
17222641-A-T 15110761-A-T **
17238501-C-A 15126621-C-A **
17338435-T-A 15226555-T-A **
17667019-C-A 15555139-C-A **
16896330-G-A 14784450-G-A **
17737497-A-C 15625617-A-C **
17859901-A-G 15748021-A-G **
18079326-T-A 15967446-T-A **
18079340-T-A 15967460-T-A **
18079342-T-G 15967462-T-G **
18136066-T-G 16024186-T-G **
18166165-TC-T 16054285-TC-T **
16896336-C-G 14784456-C-G **
16786190-C-A 14674310-C-A **
18191605-C-A 16079725-C-A **
16286514-C-T 14174634-C-T BY106670 **
15852712-T-A 13740832-T-A **
15918924-C-A 13807044-C-A **
15946646-C-A 13834766-C-A **
15957676-C-A 13845796-C-A **
15963734-A-C 13851854-A-C **
16008229-A-C 13896349-A-C **
16345073-C-A 14233193-C-A **
16707824-G-T 14595944-G-T **
16411149-A-T 14299269-A-T **
16411316-A-C 14299436-A-C **
10752420-A-ATC **
16572927-G-T 14461047-G-T **
16598984-CAAAAAAAA-C 14487104-CAAAAAAAA-C 25×A**
16623516-G-T 14511636-G-T **
16623699-G-T 14511819-G-T **
18186098-A-C 16074218-A-C **
18212481-A-G 16100601-A-G FGC49278 **
20714529-G-T 18552643-G-T P4_Prx **
20569536-A-C 18407650-A-C P5_Dst **
19773929-T-A 17662049-T-A P5_Prx **
19773936-G-T 17662056-G-T P5_Prx **
20028110-T-G 17916230-T-G P5_Prx **
20050987-T-G 17939107-T-G P5_Prx **
20051080-A-C 17939200-A-C P5_Prx **
20252829-G-C 18090943-G-C P5_Dst **
20569561-G-T 18407675-G-T P5_Dst **
19773889-G-T 17662009-G-T P5_Prx **
20579295-A-T 18417409-A-T P5_Dst **
20579325-A-T 18417439-A-T P5_Dst **
20579341-C-G 18417455-C-G P5_Dst **
20671617-A-T 18509731-A-T P4_Prx **
20714503-A-T 18552617-A-T P4_Prx **
20714517-C-A 18552631-C-A P4_Prx **
20714525-G-T 18552639-G-T P4_Prx **
19773903-G-T 17662023-G-T P5_Prx **
19730855-A-T 17618975-A-T P5_Prx **
18249986-TAA-T 16138106-TAA-T 10×A**
19294037-C-A 17182157-C-A **
18410543-T-A 16298663-T-A P6_Gap **
18728685-C-A 16616805-C-A **
18733644-G-C 16621764-G-C **
18930092-T-G 16818212-T-G **
18991009-T-A 16879129-T-A **
19059927-T-C 16948047-T-C **
19131788-C-A 17019908-C-A **
19318210-A-C 17206330-A-C **
19730849-G-C 17618969-G-C P5_Prx **
19318233-A-C 17206353-A-C **
19460085-A-C 17348205-A-C **
19599102-C-CA 17487222-C-CA P5_Prx **
19599118-CA-C 17487238-CA-C P5_Prx **
19678779-C-A 17566899-C-A P5_Prx **
19730829-A-G 17618949-A-G P5_Prx **
19730835-G-T 17618955-G-T P5_Prx **
10752423-TTA-T **
10752443-CCACTG-C **
10752418-C-T **
19052414-CAAAA-C 16940534-CAAAA-C 24×A**
10755329-TTCCAC-T **
28580429-C-A 26434282-C-A **
6996823-A-C 7128782-A-C **
10844152-C-T **
10679240-G-A **
10919480-G-T **
22662074-C-A 20500188-C-A **
56728203-T-A **
19758791-T-G 17646911-T-G P5_Prx **
10815521-G-T **
14696021-AAC-A 12584087-AAC-A **
10901559-T-G **
10923606-C-A **
10780854-C-A **
9799133-TCA-T 9961524-TCA-T **
24513601-C-A 22367454-C-A **
10935798-C-A **
16102018-T-G 13990138-T-G P8_Prx 6×TTTTG**
8314278-G-A 8446237-G-A **
28816074-A-T 26669927-A-T **
13809370-C-A 11688664-C-A **
7621941-C-A 7753900-C-A **
11031458-T-C **
13700656-A-T 11544980-A-T **
10968246-C-A **
8314297-C-T 8446256-C-T **
11666084-A-T **
8314302-G-A 8446261-G-A **
6310859-A-T 6442818-A-T IR3_Dst **
13859599-C-T 11738893-C-T **
24624535-T-G 22478388-T-G P3_t2 10×TG**
10801638-A-G **
10801682-C-G **
10801685-T-A **
7140823-C-A 7272782-C-A **
20579331-A-T 18417445-A-T P5_Dst **
6163552-C-A 6295511-C-A IR3_Dst **
9920298-C-T 10082689-C-T **
10942681-C-G **
24579810-GT-G 22433663-GT-G P3_t2 **
9920260-G-T 10082651-G-T **
10752388-C-G **
9920279-C-T 10082670-C-T Z22418 **
9920295-A-G 10082686-A-G **
9920319-C-G 10082710-C-G **
10835554-T-G **
10872257-T-A **
10872306-A-C **
3146763-C-A 3278722-C-A **
10760016-A-T **
10982185-AATCAC-A **
6712671-C-CT 6844630-C-CT 8×T**
10989116-G-A **
10942679-C-A **
20434823-C-A 18272937-C-A P5_Dst **
28818170-T-G 26672023-T-G **
10780491-C-A **
56871017-C-A **
32761-C-A **
32772-T-C **
32782-T-C **
32855-A-G **
32866-A-C **
10977766-C-A **
10764197-T-A **
13323796-C-A 11168120-C-A **
16279152-C-A 14167272-C-A **
6402790-A-T 6534749-A-T **
10820729-A-C **
10752439-C-A **
22842214-C-A 20680328-C-A **
6163566-C-A 6295525-C-A IR3_Dst **
9414463-T-G 9576854-T-G **
16896307-G-A 14784427-G-A **
6163541-A-T 6295500-A-T IR3_Dst **
18748845-C-A 16636965-C-A **
10958975-G-C **
6130220-C-A 6262179-C-A **
15542123-A-C 13430243-A-C **
10988805-T-C **
13726187-A-T 11570511-A-T **
10971897-TATTCC-T **
14986151-C-A 12874219-C-A **
14009422-C-A 11888716-C-A **
10762993-T-A **
10919701-G-T **
10932930-C-T **
14226454-C-A 12105748-C-A **
20579339-A-C 18417453-A-C P5_Dst **
10820761-C-T **
15334588-C-A 13222706-C-A **
5674827-C-A 5806786-C-A **
10763033-T-A **
10930601-T-C FGC77110 FT32899 **
10974478-C-A **
13700707-A-T 11545031-A-T **
23377534-T-TA 21215648-T-TA 9×A**
4075843-A-AAAAC 4207802-A-AAAAC 8×AAAC**
22436215-T-A 20274329-T-A DYZ19 **
5644508-T-A 5776467-T-A **
5644518-T-G 5776477-T-G **
21412261-C-CTTT 19250375-C-CTTT 36×T**
13486701-G-T 11331025-G-T **
9920264-C-A 10082655-C-A Z4879 **
4244534-C-A 4376493-C-A **
6699020-A-T 6830979-A-T 24×T**
4275258-C-CA 4407217-C-CA 21×A**
24343523-T-G 22197376-T-G P3_t1 **
13809356-T-A 11688650-T-A **
16464863-G-T 14352983-G-T **
24343538-T-G 22197391-T-G P3_t1 **
16271807-G-GAA 14159927-G-GAA 19×A**
6310820-C-G 6442779-C-G IR3_Dst **
11013170-C-A **
10887471-AACTTT-A **
4908175-C-CAA 5040134-C-CAA 17×A**
10768101-C-G **
10768103-T-A **
10768105-C-T **
21426984-C-A 19265098-C-A **
13576151-T-G 11420475-T-G **
25246431-T-A 23100284-T-A P2_r1 **
19758801-T-TG 17646921-T-TG P5_Prx **
18672633-C-A 16560753-C-A **
10801671-C-T BY83851 **
6130223-T-A 6262182-T-A **
10819326-C-A **
17155744-C-A 15043864-C-A **
13726198-A-T 11570522-A-T **
10887459-A-C **
10887471-A-C **
10768085-C-G **
8501767-C-A 8633726-C-A **
23505196-G-T 21343310-G-T **
14191959-C-A 12071253-C-A **
13504808-C-A 11349132-C-A **
3550598-A-AC 3682557-A-AC **
16938218-C-A 14826338-C-A 19×T**
10896233-C-A **
18825629-CAAAA-C 16713749-CAAAA-C 20×A**
23123058-A-AAT 20961172-A-AAT 9×AT**
9441437-C-A 9603828-C-A **
4236471-CAAAAA-C 4368430-CAAAAA-C 17×A**
19146543-C-A 17034663-C-A **
10825466-AT-A **
16896315-C-T 14784435-C-T **
16896346-T-C 14784466-T-C **
10835511-C-CAACTG **
10835519-T-G **
10835530-T-TACGCA **
10835556-G-C **
10823801-C-A **
9920276-C-G 10082667-C-G **
7138313-C-A 7270272-C-A **
7166615-TA-T 7298574-TA-T **
6996625-C-A 7128584-C-A **
7033500-A-G 7165459-A-G **
7042220-G-T 7174179-G-T **
7043363-G-T 7175322-G-T **
7048404-A-T 7180363-A-T **
7148344-A-T 7280303-A-T **
7166859-C-A 7298818-C-A **
6833420-C-T 6965379-C-T Y134891 **
7269783-T-C 7401742-T-C **
7269784-G-A 7401743-G-A **
7436722-G-T 7568681-G-T **
7501295-T-A 7633254-T-A IR1_L **
7829558-C-A 7961517-C-A **
8003209-G-GT 8135168-G-GT 9×T**
8084234-ATCTC-A 8216193-ATCTC-A **
6901049-C-A 7033008-C-A **
6826970-C-T 6958929-C-T **
8084247-AT-A 8216206-AT-A **
6310818-G-T 6442777-G-T IR3_Dst **
5898420-G-T 6030379-G-T **
6050993-T-A 6182952-T-A **
6051322-G-T 6183281-G-T **
6064242-C-A 6196201-C-A **
6163549-C-A 6295508-C-A IR3_Dst **
6163553-T-A 6295512-T-A IR3_Dst **
6163564-C-A 6295523-C-A IR3_Dst **
6414927-ATTAT-A 6546886-ATTAT-A **
6826711-T-G 6958670-T-G **
6445913-C-A 6577872-C-A **
6454734-G-T 6586693-G-T **
13941004-T-G 11820298-T-G **
6714526-G-T 6846485-G-T **
6720468-G-T 6852427-G-T **
6757198-G-A 6889157-G-A **
6770003-T-G 6901962-T-G **
8084242-AT-A 8216201-AT-A **
8084253-T-TTTA 8216212-T-TTTA **
5800737-C-A 5932696-C-A **
10663030-C-T **
9920271-A-T 10082662-A-T **
9936728-A-C 10099119-A-C **
9986225-T-G 10148616-T-G **
9990835-T-A 10153226-T-A **
9991218-C-A 10153609-C-A **
10660533-T-A **
10665858-C-A **
9540265-G-T 9702656-G-T IR3_Prx **
10677140-A-G **
10683469-C-A **
10684168-C-A **
10684194-C-A **
10685728-G-C **
10687148-C-A **
10748319-C-T **
9540269-C-A 9702660-C-A IR3_Prx **
9511867-G-A 9674258-G-A **
8084259-A-T 8216218-A-T **
8501773-C-A 8633732-C-A **
8084262-TA-T 8216221-TA-T **
8314299-C-T 8446258-C-T **
8314300-C-A 8446259-C-A **
8314333-T-C 8446292-T-C **
8369672-G-T 8501631-G-T **
8501743-T-A 8633702-T-A **
8501750-T-A 8633709-T-A 5×TTC**
8671510-T-G 8803469-T-G **
9414487-A-C 9576878-A-C **
8827302-C-T 8959261-C-T **
8977728-T-A 9140119-T-A **
8977736-T-A 9140127-T-A **
8977746-T-A 9140137-T-A **
8977753-T-A 9140144-T-A **
8977774-T-A 9140165-T-A **
8977784-T-A 9140175-T-A **
5887604-A-G 6019563-A-G **
32847-A-G **
5758912-G-T 5890871-G-T **
2812808-G-A 2944767-G-A **
4272674-T-G 4404633-T-G **
3051356-T-A 3183315-T-A **
14118236-G-T 11997530-G-T **
4258644-C-A 4390603-C-A **
4187534-T-G 4319493-T-G **
4187444-C-A 4319403-C-A **
2699644-A-C 2831603-A-C **
4114856-T-G 4246815-T-G **
2785945-C-A 2917904-C-A **
4074158-G-T 4206117-G-T **
2812765-A-T 2944724-A-T **
4027644-C-A 4159603-C-A **
3860974-C-A 3992933-C-A **
2812820-C-T 2944779-C-T **
4460683-C-A 4592642-C-A **
3681395-A-C 3813354-A-C **
3641590-A-T 3773549-A-T **
3627771-G-C 3759730-G-C 9×A**
3627750-A-C 3759709-A-C **
3627749-A-C 3759708-A-C **
2812822-T-C 2944781-T-C **
3592032-C-A 3723991-C-A **
3467697-C-A 3599656-C-A **
3449003-G-T 3580962-G-T **
2812823-T-A 2944782-T-A **
3347684-C-A 3479643-C-A **
2812824-C-G 2944783-C-G **
3218570-C-A 3350529-C-A **
4449198-G-T 4581157-G-T **
4272632-T-A 4404591-T-A **
4470393-G-T 4602352-G-T **
4931131-C-A 5063090-C-A **
5716190-A-C 5848149-A-C **
5710588-C-A 5842547-C-A **
15392343-C-A 13280463-C-A **
5625484-A-T 5757443-A-T **
5623561-G-T 5755520-G-T **
5576746-T-A 5708705-T-A **
5459908-T-G 5591867-T-G **
5449209-C-A 5581168-C-A **
5421250-T-A 5553209-T-A **
5191322-T-C 5323281-T-C **
5170514-C-A 5302473-C-A **
5164448-C-A 5296407-C-A FT12111 **
5022218-A-T 5154177-A-T **
4939439-C-A 5071398-C-A **
2885664-T-G 3017623-T-G **
4811243-G-T 4943202-G-T **
4604290-C-A 4736249-C-A **
4538441-C-A 4670400-C-A **
4557411-A-T 4689370-A-T **
4580241-T-G 4712200-T-G **
3807380-C-CT 3939339-C-CT 9×T**
4604259-T-G 4736218-T-G **
4604289-T-G 4736248-T-G **
9221691-A-G 9384082-A-G **
10963041-T-G **
14716762-C-A 12604830-C-A ***
2752415-TAAAAA-T,TAAA 2884374-TAAAAA-T,TAAA 23×A***
14966960-A-AT 12855035-A-AT ***
7535856-A-T 7667815-A-T ***
3790878-GTATATA-G 3922837-GTATATA-G 21×TA***
9774443-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-T,TTCTTTCTCTCTCTCTTTCTTTCTCTCTTTCTC 9936834-TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT-T,TTCTTTCTCTCTCTCTTTCTTTCTCTCTTTCTC ***
16045054-A-ATT 13933174-A-ATT 13×T***
15011301-A-AAATAAT 12899386-A-AAAT 15×AAT***
10987233-A-G ***
9774418-CT-C 9936809-CT-C ***
16506572-C-A 14394692-C-A ***
9992497-T-C 10154888-T-C BY82596 ***
10778818-C-G ***
15717136-A-AT 13605256-A-AT 10×T***
22520788-CAAAA-C 20358902-CAAAA-C 23×A***
17895175-ATTTTTT-A,ATTTT 15783295-ATTTTTT-A,ATTTT 21×T***
14757508-TGTATCCAGTG-T 12645577-TGTATCCAGTG-T ***
13992191-CAAAAAA-C 11871485-CAAAAAA-C 22×A***
21402181-CTTTTTT-C 19240295-CTTTTTT-C 34×T***
14527009-C-A 12415210-C-A ***
6741325-C-A 6873284-C-A ***
10789378-T-A ***
19021026-CTTT-C,CTT 16909146-CTTT-C,CTT 15×T***
6861452-C-A 6993411-C-A ***
18756795-A-T 16644915-A-T ***
22722338-CTTTTTTT-C 20560452-CTTTTTTT-C 24×T***
22316243-C-A 20154357-C-A DYZ19 ***
10975725-C-A ***
7436264-T-C 7568223-T-C ***
10776576-G-C ***
7645202-A-ATT 7777161-A-ATT 17×T***
14711909-G-A 12599976-G-A ***
7974266-C-A 8106225-C-A ***
22855265-G-T 20693379-G-T ***
10778813-C-A ***
3990620-C-A 4122579-C-A ***
13203566-CA-C,CAA 19×A***
23803235-T-C 21641349-T-C ***
24047455-A-G 21901308-A-G ***
2651883-CTT-C,CTTT 2783842-CTT-C,CTTT 19×T***
17545580-G-A 15433700-G-A FT2019 ***
17383859-A-T 15271979-A-T ***
17355496-C-A 15243616-C-A ***
14530847-A-AAT 12419048-A-AAT ***
22698929-CTT-C,CT 20537043-CTT-C,CT 13×T***
6699068-T-C 6831027-T-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: N245123991624180495257917448
Used in age calculations991624180495257917448
Counts of SNPs1718
Variant counts last updated 2019-10-28 04:26:45.



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